Package: DEWSeq
Type: Package
Title: Differential Expressed Windows Based on Negative Binomial
        Distribution
Version: 1.2.0
Author: Sudeep Sahadevan <sahadeva@embl.de>, Thomas Schwarzl <schwarzl@embl.de>
Maintainer: Hentze bioinformatics team <biohentze@embl.de>
Description: Differential expression analysis of windows for next-generation sequencing data like eCLIP or iCLIP data.
Imports: BiocGenerics, data.table(>= 1.11.8), GenomeInfoDb,
        GenomicRanges, methods, S4Vectors, SummarizedExperiment, stats,
        utils
Depends: R(>= 4.0.0), R.utils, DESeq2, BiocParallel
Suggests: knitr, rmarkdown, testthat, BiocStyle, IHW
VignetteBuilder: knitr
biocViews: Sequencing, GeneRegulation, FunctionalGenomics,
        DifferentialExpression
License: LGPL (>= 3)
URL: https://github.com/EMBL-Hentze-group/DEWSeq/
Encoding: UTF-8
LazyData: false
RoxygenNote: 6.1.1
BugReports: https://github.com/EMBL-Hentze-group/DEWSeq/issues
git_url: https://git.bioconductor.org/packages/DEWSeq
git_branch: RELEASE_3_11
git_last_commit: 10771df
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
NeedsCompilation: no
Packaged: 2020-04-28 04:28:15 UTC; biocbuild
Built: R 4.0.0; ; 2020-05-12 05:44:48 UTC; unix
