# Package for CTDbase data query, visualization and downstream analysis

## Documentation for package ‘CTDquerier’ version 2.0.0

- DESCRIPTION file.

## Help Pages

CTDdata | Class CTDdata
CTDdata-class | Class CTDdata
CTDquerier | Package for CTDbase data query, data visualization and data analysis.
download_ctd_chem | Function to download checmicals available in CTDbase
download_ctd_dise | Function to download diseases available in CTDbase
download_ctd_genes | Function to download genes available in CTDbase
enrich | Method to perform enrichment analysis using two 'CTDdata' objects
enrich-method | Class CTDdata
gala | 'CTDdata' for ilustrative purpouses
get_table | Method to obtain a specific inner table from a 'CTDdata' object.
get_table-method | Class CTDdata
get_terms | Getter to obtain the terms used to perform a query into CTDbase
get_terms-method | Class CTDdata
leaf_plot | Function to create a leaf plot
load_ctd_chem | Function to load the '.tsv.gz' file for chemicals
load_ctd_dise | Function to load the '.tsv.gz' file for disease
load_ctd_gene | Function to load the '.tsv.gz' file for genes
plot-method | Class CTDdata
query_ctd_chem | Function to query CTDbase using chemical terminology ( Chemical Name )
query_ctd_dise | Function to query CTDbase using disease terminology
query_ctd_gene | Function to query CTDbase using gene terminology ( Gene Symbol )