# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Dec 26 18:07:01 2024
# ------------------------------------------------

package:
  name: bioconductor-coverageview
  version: 1.44.0
source:
  md5: 34b54696a30b3e5dc9addde643fcd0de
  url:
    - https://bioarchive.galaxyproject.org/CoverageView_1.44.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/Archive/CoverageView/CoverageView_1.44.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/CoverageView_1.44.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-coverageview/bioconductor-coverageview_1.44.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-coverageview >=1.44.0,<1.45.0a0
  string: r44hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 3.5.2 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.43 h4bf12b8_2
    - bioconductor-biobase 2.66.0 r44h3df3fcb_0
    - bioconductor-biocgenerics 0.52.0 r44hdfd78af_0
    - bioconductor-biocio 1.16.0 r44hdfd78af_0
    - bioconductor-biocparallel 1.40.0 r44he5774e6_0
    - bioconductor-biostrings 2.74.0 r44h3df3fcb_0
    - bioconductor-data-packages 20241220 hdfd78af_0
    - bioconductor-delayedarray 0.32.0 r44h3df3fcb_0
    - bioconductor-genomeinfodb 1.42.0 r44hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.13 r44hdfd78af_0
    - bioconductor-genomicalignments 1.42.0 r44h3df3fcb_0
    - bioconductor-genomicranges 1.58.0 r44h3df3fcb_0
    - bioconductor-iranges 2.40.0 r44h3df3fcb_0
    - bioconductor-matrixgenerics 1.18.0 r44hdfd78af_0
    - bioconductor-rhtslib 3.2.0 r44h15a9599_0
    - bioconductor-rsamtools 2.22.0 r44h77050f0_0
    - bioconductor-rtracklayer 1.66.0 r44h15a9599_0
    - bioconductor-s4arrays 1.6.0 r44h3df3fcb_0
    - bioconductor-s4vectors 0.44.0 r44h3df3fcb_0
    - bioconductor-sparsearray 1.6.0 r44h3df3fcb_0
    - bioconductor-summarizedexperiment 1.36.0 r44hdfd78af_0
    - bioconductor-ucsc.utils 1.2.0 r44hdfd78af_0
    - bioconductor-xvector 0.46.0 r44h15a9599_0
    - bioconductor-zlibbioc 1.52.0 r44h3df3fcb_0
    - bwidget 1.10.1 ha770c72_0
    - bzip2 1.0.8 h4bc722e_7
    - c-ares 1.34.4 hb9d3cd8_0
    - ca-certificates 2024.12.14 hbcca054_0
    - cairo 1.18.2 h3394656_1
    - curl 8.11.1 h332b0f4_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_3
    - fontconfig 2.15.0 h7e30c49_1
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 h267a509_2
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 14.2.0 h6b349bd_1
    - gfortran_impl_linux-64 14.2.0 hc73f493_1
    - graphite2 1.3.13 h59595ed_1003
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 14.2.0 h2c03514_1
    - harfbuzz 10.1.0 h0b3b770_0
    - icu 75.1 he02047a_0
    - jq 1.7.1 hd590300_0
    - kernel-headers_linux-64 3.10.0 he073ed8_18
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.3 h659f571_0
    - ld_impl_linux-64 2.43 h712a8e2_2
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 26_linux64_openblas
    - libcblas 3.9.0 26_linux64_openblas
    - libcurl 8.11.1 h332b0f4_0
    - libdeflate 1.23 h4ddbbb0_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 hd590300_2
    - libexpat 2.6.4 h5888daf_0
    - libffi 3.4.2 h7f98852_5
    - libgcc 14.2.0 h77fa898_1
    - libgcc-devel_linux-64 14.2.0 h41c2201_101
    - libgcc-ng 14.2.0 h69a702a_1
    - libgfortran 14.2.0 h69a702a_1
    - libgfortran-ng 14.2.0 h69a702a_1
    - libgfortran5 14.2.0 hd5240d6_1
    - libglib 2.82.2 h2ff4ddf_0
    - libgomp 14.2.0 h77fa898_1
    - libiconv 1.17 hd590300_2
    - libjpeg-turbo 3.0.0 hd590300_1
    - liblapack 3.9.0 26_linux64_openblas
    - liblzma 5.6.3 hb9d3cd8_1
    - libmpdec 4.0.0 h4bc722e_0
    - libnghttp2 1.64.0 h161d5f1_0
    - libopenblas 0.3.28 pthreads_h94d23a6_1
    - libpng 1.6.44 hadc24fc_0
    - libsanitizer 14.2.0 h2a3dede_1
    - libsqlite 3.47.2 hee588c1_0
    - libssh2 1.11.1 hf672d98_0
    - libstdcxx 14.2.0 hc0a3c3a_1
    - libstdcxx-devel_linux-64 14.2.0 h41c2201_101
    - libstdcxx-ng 14.2.0 h4852527_1
    - libtiff 4.7.0 hd9ff511_3
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.5.0 h851e524_0
    - libxcb 1.17.0 h8a09558_0
    - libxml2 2.13.5 h8d12d68_1
    - libzlib 1.3.1 hb9d3cd8_2
    - make 4.4.1 hb9d3cd8_2
    - ncurses 6.5 he02047a_1
    - oniguruma 6.9.9 hd590300_0
    - openssl 3.4.0 hb9d3cd8_0
    - pango 1.54.0 h861ebed_4
    - pcre2 10.44 hba22ea6_2
    - pip 24.3.1 pyh145f28c_2
    - pixman 0.44.2 h29eaf8c_0
    - pthread-stubs 0.4 hb9d3cd8_1002
    - python 3.13.1 ha99a958_102_cp313
    - python_abi 3.13 5_cp313
    - pyyaml 6.0.2 py313h536fd9c_1
    - r-abind 1.4_5 r44hc72bb7e_1006
    - r-askpass 1.2.1 r44h2b5f3a1_0
    - r-base 4.4.2 hc737e89_2
    - r-bh 1.87.0_1 r44hc72bb7e_0
    - r-bitops 1.0_9 r44h2b5f3a1_0
    - r-codetools 0.2_20 r44hc72bb7e_1
    - r-cpp11 0.5.1 r44hc72bb7e_0
    - r-crayon 1.5.3 r44hc72bb7e_1
    - r-curl 6.0.1 r44h2700575_0
    - r-formatr 1.14 r44hc72bb7e_2
    - r-futile.logger 1.4.3 r44hc72bb7e_1006
    - r-futile.options 1.0.1 r44hc72bb7e_1005
    - r-httr 1.4.7 r44hc72bb7e_1
    - r-jsonlite 1.8.9 r44h2b5f3a1_0
    - r-lambda.r 1.2.4 r44hc72bb7e_4
    - r-lattice 0.22_6 r44hb1dbf0f_1
    - r-matrix 1.6_5 r44he966344_1
    - r-matrixstats 1.4.1 r44h2b5f3a1_0
    - r-mime 0.12 r44hb1dbf0f_3
    - r-openssl 2.2.2 r44he8289e2_0
    - r-r6 2.5.1 r44hc72bb7e_3
    - r-rcurl 1.98_1.16 r44he8228da_1
    - r-restfulr 0.0.15 r44h5ef9028_5
    - r-rjson 0.2.23 r44h93ab643_0
    - r-snow 0.4_4 r44hc72bb7e_3
    - r-sys 3.4.3 r44h2b5f3a1_0
    - r-xml 3.99_0.17 r44h5bae778_2
    - r-yaml 2.3.10 r44hdb488b9_0
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - setuptools 75.6.0 pyhff2d567_1
    - sysroot_linux-64 2.17 h4a8ded7_18
    - tk 8.6.13 noxft_h4845f30_101
    - tktable 2.10 h8bc8fbc_6
    - toml 0.10.2 pyhd8ed1ab_1
    - tomlkit 0.13.2 pyha770c72_1
    - tzdata 2024b hc8b5060_0
    - xmltodict 0.14.2 pyhd8ed1ab_1
    - xorg-libice 1.1.2 hb9d3cd8_0
    - xorg-libsm 1.2.5 he73a12e_0
    - xorg-libx11 1.8.10 h4f16b4b_1
    - xorg-libxau 1.0.12 hb9d3cd8_0
    - xorg-libxdmcp 1.1.5 hb9d3cd8_0
    - xorg-libxext 1.3.6 hb9d3cd8_0
    - xorg-libxrender 0.9.12 hb9d3cd8_0
    - xorg-libxt 1.3.1 hb9d3cd8_0
    - yaml 0.2.5 h7f98852_2
    - yq 3.4.3 pyhd8ed1ab_1
    - zstd 1.5.6 ha6fb4c9_0
  run:
    - bioconductor-genomicalignments >=1.42.0,<1.43.0
    - bioconductor-genomicranges >=1.58.0,<1.59.0
    - bioconductor-iranges >=2.40.0,<2.41.0
    - bioconductor-rsamtools >=2.22.0,<2.23.0
    - bioconductor-rtracklayer >=1.66.0,<1.67.0
    - bioconductor-s4vectors >=0.44.0,<0.45.0
    - r-base >=4.4,<4.5.0a0
    - r-base >=4.4,<4.5.0a0
test:
  commands:
    - $R -e "library('CoverageView')"
about:
  description: This package provides a framework for the visualization of genome coverage
    profiles. It can be used for ChIP-seq experiments, but it can be also used for
    genome-wide nucleosome positioning experiments or other experiment types where
    it is important to have a framework in order to inspect how the coverage distributed
    across the genome
  home: https://bioconductor.org/packages/3.20/bioc/html/CoverageView.html
  license: Artistic-2.0
  summary: Coverage visualization package for R
extra:
  copy_test_source_files: true
  final: true
