# consensus Independent Component Analysis

## Documentation for package ‘consICA’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

consICA | Calculate consensus Independent Component Analysis
enrichGO | Enrichment analysis of GO-terms based on Ensembl IDs
estimateVarianceExplained | Estimate the variance explained by the model
getFeatures | Get features from consICA deconvolution result
getGO | Assigns IC signatures to Gene Ontologies
get_score | Create score depending on threshold and paradigm
is.consICA | Is the object is consensus ICA compliant?
oneICA | Runs 'fastICA'
plotICVarianceExplained | Barplot variance explained by each IC
samples_data | Samples of gene expression
saveReport | Save PDF report with analysis of each independent component
setOrientation | Set orientation for independent components
set_bpparam | Set up for the parallel computing for biocParallel Adapt from 'FEAST' This function sets up the environment for parallel computing.
sortDataFrame | Sort dataframe
sortFeatures | Sort Genes of consICA object
survivalAnalysis | Survival analysis based on significant IC