Package: combi
Type: Package
Title: Compositional omics model based visual integration
Version: 1.0.0
Author: Stijn Hawinkel <stijn.hawinkel@ugent.be>
Maintainer: Joris Meys <joris.meys@ugent.be>
Description: Combine quasi-likelihood estimation, compositional regression models and latent variable models for integrative visualization of several omics datasets. Both unconstrained and constrained integration is available, the results are shown as interpretable multiplots.
License: GPL-2
Encoding: UTF-8
RoxygenNote: 6.1.1
Imports: ggplot2, nleqslv, phyloseq, tensor, stats, limma, Matrix, BB,
        reshape2, alabama, cobs, Biobase, vegan, grDevices, graphics,
        methods, SummarizedExperiment
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: Metagenomics, DimensionReduction, Microbiome, Visualization,
        Metabolomics
BugReports: https://github.com/CenterForStatistics-UGent/combi/issues
git_url: https://git.bioconductor.org/packages/combi
git_branch: RELEASE_3_11
git_last_commit: 66d74fe
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
NeedsCompilation: no
Packaged: 2020-04-28 04:45:57 UTC; biocbuild
Depends: R (>= 3.5.0)
Built: R 4.0.0; ; 2020-05-11 10:03:27 UTC; unix
