^PLATFORM = GPL2025
!Platform_title = [Rice] Affymetrix Rice Genome Array
!Platform_geo_accession = GPL2025
!Platform_status = Public on May 05 2005
!Platform_submission_date = May 05 2005
!Platform_last_update_date = Dec 23 2016
!Platform_technology = in situ oligonucleotide
!Platform_distribution = commercial
!Platform_organism = Oryza sativa
!Platform_taxid = 4530
!Platform_manufacturer = Affymetrix
!Platform_manufacture_protocol = see manufacturer's web site
!Platform_description = Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
!Platform_description = 
!Platform_description = This array contains probes to query 51,279 transcripts representing two rice cultivars, with approximately 48,564 japonica transcripts and 1,260 transcripts representing the indica cultivar.This array contains probes to query 51,279 transcripts representing two rice cultivars, with approximately 48,564 japonica transcripts and 1,260 transcripts representing the indica cultivar. This unique design was created within the Affymetrix GeneChip Consortia Program and provides scientists with a single array that can be used for the study of rice. High-quality sequence data were derived from GenBank mRNAs, TIGR gene predictions, and the International Rice Genome sequencing project. The arrays were designed using NCBI UniGene Build #52, (May 7, 2004) incorporating predicted genes from GenBank and the TIGR Os1 v2 data set. (ftp.tigr.org FASTA, 89.3 MB)
!Platform_description = 
!Platform_description = Annotations derived from Affymetrix CSV file dated 4/01/2005
!Platform_description = 
!Platform_web_link = http://www.affymetrix.com/support/technical/byproduct.affx?product=rice
!Platform_web_link = http://www.affymetrix.com/analysis/index.affx
!Platform_contact_name =  ,,Affymetrix, Inc.
!Platform_contact_email = geo@ncbi.nlm.nih.gov, support@affymetrix.com
!Platform_contact_phone = 888-362-2447
!Platform_contact_institute = Affymetrix, Inc.
!Platform_contact_address =  
!Platform_contact_city = Santa Clara
!Platform_contact_state = CA
!Platform_contact_zip/postal_code = 95051
!Platform_contact_country = USA
!Platform_contact_web_link = http://www.affymetrix.com/index.affx
!Platform_relation = Affiliated with: GPL11322
!Platform_relation = Affiliated with: GPL16106 (Alternative CDF [affyricechipalt.cdf])
!Platform_relation = Alternative to: GPL18620 (Alternative custom CDF)

#ID = Affymetrix Probe Set ID LINK_PRE:"https://www.affymetrix.com/LinkServlet?array=Rice&probeset="
#GB_ACC = GenBank Accession Number LINK_PRE:"http://www.ncbi.nlm.nih.gov/nuccore/?term="
#SPOT_ID = identifies controls
#Species Scientific Name = The genus and species of the organism represented by the probe set.
#Annotation Date = The date that the annotations for this probe array were last updated. It will generally be earlier than the date when the annotations were posted on the Affymetrix web site.
#Sequence Type = Indicates whether the sequence is an Exemplar, Consensus or Control sequence. An Exemplar is a single nucleotide sequence taken directly from a public database. This sequence could be an mRNA or EST. A Consensus sequence, is a nucleotide sequence assembled by Affymetrix, based on one or more sequence taken from a public database.
#Sequence Source = The database from which the sequence used to design this probe set was taken.
#Representative Public ID = The accession number of a representative sequence. Note that for consensus-based probe sets, the representative sequence is only one of several sequences (sequence sub-clusters) used to build the consensus sequence and it is not directly used to derive the probe sequences. The representative sequence is chosen during array design as a sequence that is best associated with the transcribed region being interrogated by the probe set. Refer to the "Sequence Source" field to determine the database used.
#Target Description = GenBank description associated with the representative public identifier. Blank for some probe sets.
#Gene Title = Title of Gene represented by the probe set.
#Gene Symbol = A gene symbol, when one is available (from UniGene).
#ENTREZ_GENE_ID = Entrez Gene Database UID LINK_PRE:"http://www.ncbi.nlm.nih.gov/gene/" DELIMIT:" /// "
#RefSeq Transcript ID = References to multiple sequences in RefSeq. The field contains the ID and Description for each entry, and there can be multiple entries per ProbeSet.
#Gene Ontology Biological Process = Gene Ontology Consortium Biological Process derived from LocusLink.  Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
#Gene Ontology Cellular Component = Gene Ontology Consortium Cellular Component derived from LocusLink.  Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
#Gene Ontology Molecular Function = Gene Ontology Consortium Molecular Function derived from LocusLink.  Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
!platform_table_begin
ID	GB_ACC	SPOT_ID	Species Scientific Name	Annotation Date	Sequence Type	Sequence Source	Representative Public ID	Target Description	Gene Title	Gene Symbol	ENTREZ_GENE_ID	RefSeq Transcript ID	Gene Ontology Biological Process	Gene Ontology Cellular Component	Gene Ontology Molecular Function
AFFX-BioB-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioB-3	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2755-3052 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-BioB-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioB-5	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2032-2305 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-BioB-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioB-M	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2482-2739 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-BioC-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioC-3	E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4626-4878 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-BioC-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioC-5	E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4218-4566 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-BioDn-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioDn-3	E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5286-5570 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-BioDn-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-BioDn-5	E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4980-5256 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-CreX-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-CreX-3	Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 1089-1495 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.					0006310 // DNA recombination // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0032196 // transposition // inferred from electronic annotation		0003677 // DNA binding // inferred from electronic annotation
AFFX-CreX-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-CreX-5	Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 513-1047 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.					0006310 // DNA recombination // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0032196 // transposition // inferred from electronic annotation		0003677 // DNA binding // inferred from electronic annotation
AFFX-DapX-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-DapX-3	B. subtilis /GEN=jojG /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2684-3130 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.					0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation	0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016564 // transcription repressor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
AFFX-DapX-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-DapX-5	B. subtilis /GEN=dapB /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 1428-1926 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.					0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation	0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016564 // transcription repressor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
AFFX-DapX-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-DapX-M	B. subtilis /GEN=dapB, jojF /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2020-2580 of gb:L38424.1, not 100% identical /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.					0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation	0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016564 // transcription repressor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
AFFX-LysX-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-LysX-3	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 1061-1343 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).					0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation		0003824 // catalytic activity // inferred from electronic annotation /// 0008836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation
AFFX-LysX-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-LysX-5	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 387-658 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).					0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation		0003824 // catalytic activity // inferred from electronic annotation /// 0008836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation
AFFX-LysX-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-LysX-M	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 720-990 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).					0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation		0003824 // catalytic activity // inferred from electronic annotation /// 0008836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation
AFFX-Mgr-actin-3_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-actin-3	M. grisea /NOTE=CONTROL MG03982.4 /GEN=MG03982.4 /DB_XREF=gi:38103539 gb:EAA50223.1 /DEF=hypothetical protein similar to ACTG_CEPAC Actin, gamma gi|6002486|gb|AAF00008.1|AF056976_1 gamma-actin (Acremonium chrysogenum) gi|12718452|emb|CAC28718.1| Actin (Neurospora crassa) (15328 - 13567)							
AFFX-Mgr-actin-5_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-actin-5	M. grisea /NOTE=CONTROL MG03982.4 /GEN=MG03982.4 /DB_XREF=gi:38103539 gb:EAA50223.1 /DEF=hypothetical protein similar to ACTG_CEPAC Actin, gamma gi|6002486|gb|AAF00008.1|AF056976_1 gamma-actin (Acremonium chrysogenum) gi|12718452|emb|CAC28718.1| Actin (Neurospora crassa) (15328 - 13567)							
AFFX-Mgr-actin-M_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-actin-M	M. grisea /NOTE=CONTROL MG03982.4 /GEN=MG03982.4 /DB_XREF=gi:38103539 gb:EAA50223.1 /DEF=hypothetical protein similar to ACTG_CEPAC Actin, gamma gi|6002486|gb|AAF00008.1|AF056976_1 gamma-actin (Acremonium chrysogenum) gi|12718452|emb|CAC28718.1| Actin (Neurospora crassa) (15328 - 13567)							
AFFX-Mgr-ef1a-3_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-ef1a-3	M. grisea /NOTE=CONTROL MG03641.4 /GEN=MG03641.4 /DB_XREF=gi:38105647 gb:EAA52046.1 /DEF=hypothetical protein similar to EF1A_PODAN ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA)  gi|1072496|pir||S43861 translation elongation factor eEF-1 alpha chain							
AFFX-Mgr-ef1a-3_x_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-ef1a-3	M. grisea /NOTE=CONTROL MG03641.4 /GEN=MG03641.4 /DB_XREF=gi:38105647 gb:EAA52046.1 /DEF=hypothetical protein similar to EF1A_PODAN ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA)  gi|1072496|pir||S43861 translation elongation factor eEF-1 alpha chain							
AFFX-Mgr-ef1a-5_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-ef1a-5	M. grisea /NOTE=CONTROL MG03641.4 /GEN=MG03641.4 /DB_XREF=gi:38105647 gb:EAA52046.1 /DEF=hypothetical protein similar to EF1A_PODAN ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA)  gi|1072496|pir||S43861 translation elongation factor eEF-1 alpha chain							
AFFX-Mgr-ef1a-M_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-ef1a-M	M. grisea /NOTE=CONTROL MG03641.4 /GEN=MG03641.4 /DB_XREF=gi:38105647 gb:EAA52046.1 /DEF=hypothetical protein similar to EF1A_PODAN ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA)  gi|1072496|pir||S43861 translation elongation factor eEF-1 alpha chain							
AFFX-Mgr-gapdh-3_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-gapdh-3	M. grisea /NOTE=CONTROL MG01084.4 /GEN=MG01084.4 /DB_XREF=gi:38102607 gb:EAA49426.1 /DEF=hypothetical protein similar to (AL670003) glyceraldehyde 3-phosphate dehydrogenase (ccg-7) (Neurospora crassa) (34253 - 33022)							
AFFX-Mgr-gapdh-5_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-gapdh-5	M. grisea /NOTE=CONTROL MG01084.4 /GEN=MG01084.4 /DB_XREF=gi:38102607 gb:EAA49426.1 /DEF=hypothetical protein similar to (AL670003) glyceraldehyde 3-phosphate dehydrogenase (ccg-7) (Neurospora crassa) (34253 - 33022)							
AFFX-Mgr-gapdh-M_at		--control	Magnaporthe grisea	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Mgr-gapdh-M	M. grisea /NOTE=CONTROL MG01084.4 /GEN=MG01084.4 /DB_XREF=gi:38102607 gb:EAA49426.1 /DEF=hypothetical protein similar to (AL670003) glyceraldehyde 3-phosphate dehydrogenase (ccg-7) (Neurospora crassa) (34253 - 33022)							
AFFX-OS-18SrRNA_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-OS-18SrRNA	Oryza sativa /DEF=gi|3342031|gb|AF069218.1|AF069218 Oryza sativa 18S small subunit ribosomal RNA gene, complete sequence							
AFFX-OS-25SrRNA_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-OS-25SrRNA	Oryza sativa /DEF=gi|169818|gb|M11585.1|RICRGHA Rice 25S ribosomal RNA gene							
AFFX-OS-5.8SrRNA_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-OS-5.8SrRNA	Oryza sativa /DEF=gi|169814|gb|M35384.1|RICRGC2 Rice 5.8S rRNA gene							
AFFX-Os-actin-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AB047313.1	O. sativa /GEN=OsRAc1 /DB_XREF=gb:AB047313.1 /DB_XREF=gi:30409355 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) OsRAc1 mRNA for actin, complete cds.  /REP_ORG=O. sativa						0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
AFFX-Os-actin-3_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AB047313.1	O. sativa /GEN=OsRAc1 /DB_XREF=gb:AB047313.1 /DB_XREF=gi:30409355 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) OsRAc1 mRNA for actin, complete cds.  /REP_ORG=O. sativa						0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
AFFX-Os-actin-5_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AB047313.1	O. sativa /GEN=OsRAc1 /DB_XREF=gb:AB047313.1 /DB_XREF=gi:30409355 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) OsRAc1 mRNA for actin, complete cds.  /REP_ORG=O. sativa						0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
AFFX-Os-actin-M_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AB047313.1	O. sativa /GEN=OsRAc1 /DB_XREF=gb:AB047313.1 /DB_XREF=gi:30409355 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) OsRAc1 mRNA for actin, complete cds.  /REP_ORG=O. sativa						0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
AFFX-Os-ef1a-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK069160.1	O. sativa /GEN=ef1a /DB_XREF=gb:AK069160.1 /DB_XREF=gi:32979184 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J023007E09, full insert sequence.  /REP_ORG=O. sativa							
AFFX-Os-ef1a-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK069160.1	O. sativa /GEN=ef1a /DB_XREF=gb:AK069160.1 /DB_XREF=gi:32979184 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J023007E09, full insert sequence.  /REP_ORG=O. sativa							
AFFX-Os-ef1a-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK069160.1	O. sativa /GEN=ef1a /DB_XREF=gb:AK069160.1 /DB_XREF=gi:32979184 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J023007E09, full insert sequence.  /REP_ORG=O. sativa							
AFFX-Os-gapdh-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK108644.1	O. sativa /GEN=gapdh /DB_XREF=gb:AK108644.1 /DB_XREF=gi:32993853 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:002-148-B02, full insert sequence.  /REP_ORG=O. sativa							
AFFX-Os-gapdh-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK108644.1	O. sativa /GEN=gapdh /DB_XREF=gb:AK108644.1 /DB_XREF=gi:32993853 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:002-148-B02, full insert sequence.  /REP_ORG=O. sativa							
AFFX-Os-gapdh-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK108644.1	O. sativa /GEN=gapdh /DB_XREF=gb:AK108644.1 /DB_XREF=gi:32993853 /FEA=FLmRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:002-148-B02, full insert sequence.  /REP_ORG=O. sativa							
AFFX-Os-r2-Bs-dap-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-dap-3	B. subtilis /GEN=jojG /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2634-3089 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.							
AFFX-Os-r2-Bs-dap-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-dap-5	B. subtilis /GEN=dapB /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 1439-1846 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.							
AFFX-Os-r2-Bs-dap-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-dap-M	B. subtilis /GEN=dapB, jojF /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2055-2578 of gb:L38424.1, not 100% identical /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.							
AFFX-Os-r2-Bs-lys-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-lys-3	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 1008-1263 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).							
AFFX-Os-r2-Bs-lys-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-lys-5	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 411-659 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).							
AFFX-Os-r2-Bs-lys-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-lys-M	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 673-1002 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).							
AFFX-Os-r2-Bs-phe-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-phe-3	B. subtilis /GEN=pheB /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2897-3200 of gb:M24537.1, not 100% identical /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.							
AFFX-Os-r2-Bs-phe-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-phe-5	B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2116-2382 of gb:M24537.1 /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.							
AFFX-Os-r2-Bs-phe-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-phe-M	B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2484-2875 of gb:M24537.1 /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.							
AFFX-Os-r2-Bs-thr-3_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-thr-3	B. subtilis /GEN=thrB /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 1735-2143 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase.							
AFFX-Os-r2-Bs-thr-5_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-thr-5	B. subtilis /GEN=thrC /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 290-888 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase.							
AFFX-Os-r2-Bs-thr-M_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Bs-thr-M	B. subtilis /GEN=thrC, thrB /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 1045-1556 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase.							
AFFX-Os-r2-Ec-bioB-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioB-3	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2772-3004 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-Ec-bioB-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioB-5	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2071-2304 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-Ec-bioB-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioB-M	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2393-2682 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-Ec-bioC-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioC-3	E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4608-4883 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-Ec-bioC-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioC-5	E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4257-4573 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-Ec-bioD-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioD-3	E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5312-5559 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-Ec-bioD-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-Ec-bioD-5	E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5024-5244 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.							
AFFX-Os-r2-P1-cre-3_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-P1-cre-3	Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 1032-1270 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.							
AFFX-Os-r2-P1-cre-5_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-r2-P1-cre-5	Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 581-1001 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.							
AFFX-Os-TrpnX-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-TrpnX-3	B. subtilis /GEN=trpC, trpF /DB_XREF=gb:K01391.1 /NOTE=SIF corresponding to nucleotides 3790-4368 of gb:K01391.1, not 100% identical /DEF=B.subtilis tryptophan (trp) operon, complete cds.							
AFFX-Os-TrpnX-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-TrpnX-5	B. subtilis /GEN=trpE, trpD /DB_XREF=gb:K01391.1 /NOTE=SIF corresponding to nucleotides 1953-2483 of gb:K01391.1, not 100% identical /DEF=B.subtilis tryptophan (trp) operon, complete cds.							
AFFX-Os-TrpnX-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os-TrpnX-M	B. subtilis /GEN=trpD, trpC /DB_XREF=gb:K01391.1 /NOTE=SIF corresponding to nucleotides 2880-3359 of gb:K01391.1, not 100% identical /DEF=B.subtilis tryptophan (trp) operon, complete cds.							
AFFX-Os_18SrRNA_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_18SrRNA	Oryza sativa /REF=AF069218.1 /DEF=18S small subunit ribosomal RNA gene /LEN=1754							
AFFX-Os_28SrRNA_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_28SrRNA	Oryza sativa /REF=M11585 /DEF=25S ribosomal RNA gene /LEN=3377							
AFFX-Os_Actin_3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Actin_3	Oryza sativa /REF=X16280 /DEF=RAc1 mRNA for actin /LEN=1460 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Actin_5_f_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Actin_5	Oryza sativa /REF=X16280 /DEF=RAc1 mRNA for actin /LEN=1460 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Actin_M_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Actin_M	Oryza sativa /REF=X16280 /DEF=RAc1 mRNA for actin /LEN=1460 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Cyph_3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Cyph_3	Oryza sativa /REF=L29471 /DEF=cyclophilin 1 (Cyp1) /LEN=590 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Cyph_5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Cyph_5	Oryza sativa /REF=L29471 /DEF=cyclophilin 1 (Cyp1) /LEN=590 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Cyph_M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Cyph_M	Oryza sativa /REF=L29471 /DEF=cyclophilin 1 (Cyp1) /LEN=590 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Gapdh_3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Gapdh_3	Oryza sativa /REF=U31676 /DEF=clone glyceraldehyde-3-phosphate dehydrogenase (Gpc) /LEN=1326 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Gapdh_5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Gapdh_5	Oryza sativa /REF=U31676 /DEF=clone glyceraldehyde-3-phosphate dehydrogenase (Gpc) /LEN=1326 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Gapdh_M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Gapdh_M	Oryza sativa /REF=U31676 /DEF=clone glyceraldehyde-3-phosphate dehydrogenase (Gpc) /LEN=1326 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Ubiquitin_3_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Ubiquitin_3	Oryza sativa /REF=U37687 /DEF=polyubiquitin (Rubq1) /LEN=1679 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Ubiquitin_5_f_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Ubiquitin_5	Oryza sativa /REF=U37687 /DEF=polyubiquitin (Rubq1) /LEN=1679 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-Os_Ubiquitin_M_f_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-Os_Ubiquitin_M	Oryza sativa /REF=U37687 /DEF=polyubiquitin (Rubq1) /LEN=1679 (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively)							
AFFX-PheX-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-PheX-3	B. subtilis /GEN=pheB /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2885-3326 of gb:M24537.1, not 100% identical /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.					0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation	0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation	0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation
AFFX-PheX-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-PheX-5	B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2028-2375 of gb:M24537.1, not 100% identical /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.					0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation	0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation	0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation
AFFX-PheX-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-PheX-M	B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2437-2828 of gb:M24537.1 /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.					0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation	0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation	0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation
AFFX-r2-Bs-dap-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-dap-3	B. subtilis /GEN=jojG /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2634-3089 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.					0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation	0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016564 // transcription repressor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
AFFX-r2-Bs-dap-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-dap-5	B. subtilis /GEN=dapB /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 1439-1846 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.					0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation	0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016564 // transcription repressor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
AFFX-r2-Bs-dap-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-dap-M	B. subtilis /GEN=dapB, jojF /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2055-2578 of gb:L38424.1, not 100% identical /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds's.					0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation	0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016564 // transcription repressor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation
AFFX-r2-Bs-lys-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-lys-3	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 1008-1263 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).					0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation		0003824 // catalytic activity // inferred from electronic annotation /// 0008836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation
AFFX-r2-Bs-lys-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-lys-5	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 411-659 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).					0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation		0003824 // catalytic activity // inferred from electronic annotation /// 0008836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation
AFFX-r2-Bs-lys-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-lys-M	B. subtilis /GEN=lys /DB_XREF=gb:X17013.1 /NOTE=SIF corresponding to nucleotides 673-1002 of gb:X17013.1, not 100% identical /DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).					0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation		0003824 // catalytic activity // inferred from electronic annotation /// 0008836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation
AFFX-r2-Bs-phe-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-phe-3	B. subtilis /GEN=pheB /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2897-3200 of gb:M24537.1, not 100% identical /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.					0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation	0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation	0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation
AFFX-r2-Bs-phe-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-phe-5	B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2116-2382 of gb:M24537.1 /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.					0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation	0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation	0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation
AFFX-r2-Bs-phe-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-phe-M	B. subtilis /GEN=pheA /DB_XREF=gb:M24537.1 /NOTE=SIF corresponding to nucleotides 2484-2875 of gb:M24537.1 /DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofunctional prephenate dehydratase (pheA) genes, complete cds.					0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation	0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation	0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation
AFFX-r2-Bs-thr-3_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-thr-3	B. subtilis /GEN=thrB /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 1735-2143 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase.					0006508 // proteolysis // inferred from electronic annotation /// 0006520 // amino acid metabolic process // inferred from electronic annotation /// 0006566 // threonine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009082 // branched chain family amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009088 // threonine biosynthetic process // inferred from electronic annotation /// 0009097 // isoleucine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004412 // homoserine dehydrogenase activity // inferred from electronic annotation /// 0004413 // homoserine kinase activity // inferred from electronic annotation /// 0004795 // threonine synthase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation
AFFX-r2-Bs-thr-5_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-thr-5	B. subtilis /GEN=thrC /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 290-888 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase.					0006508 // proteolysis // inferred from electronic annotation /// 0006520 // amino acid metabolic process // inferred from electronic annotation /// 0006566 // threonine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009082 // branched chain family amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009088 // threonine biosynthetic process // inferred from electronic annotation /// 0009097 // isoleucine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004412 // homoserine dehydrogenase activity // inferred from electronic annotation /// 0004413 // homoserine kinase activity // inferred from electronic annotation /// 0004795 // threonine synthase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation
AFFX-r2-Bs-thr-M_s_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Bs-thr-M	B. subtilis /GEN=thrC, thrB /DB_XREF=gb:X04603.1 /NOTE=SIF corresponding to nucleotides 1045-1556 of gb:X04603.1 /DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase.					0006508 // proteolysis // inferred from electronic annotation /// 0006520 // amino acid metabolic process // inferred from electronic annotation /// 0006566 // threonine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // amino acid biosynthetic process // inferred from electronic annotation /// 0009082 // branched chain family amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009088 // threonine biosynthetic process // inferred from electronic annotation /// 0009097 // isoleucine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004412 // homoserine dehydrogenase activity // inferred from electronic annotation /// 0004413 // homoserine kinase activity // inferred from electronic annotation /// 0004795 // threonine synthase activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation
AFFX-r2-Ec-bioB-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioB-3	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2772-3004 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-Ec-bioB-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioB-5	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2071-2304 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-Ec-bioB-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioB-M	E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2393-2682 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-Ec-bioC-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioC-3	E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4608-4883 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-Ec-bioC-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioC-5	E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4257-4573 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-Ec-bioD-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioD-3	E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5312-5559 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-Ec-bioD-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-Ec-bioD-5	E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5024-5244 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.					0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009236 // cobalamin biosynthetic process // inferred from electronic annotation	0005737 // cytoplasm // inferred from electronic annotation	0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation
AFFX-r2-P1-cre-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-P1-cre-3	Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 1032-1270 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.					0006310 // DNA recombination // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0032196 // transposition // inferred from electronic annotation		0003677 // DNA binding // inferred from electronic annotation
AFFX-r2-P1-cre-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-P1-cre-5	Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 581-1001 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.					0006310 // DNA recombination // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0032196 // transposition // inferred from electronic annotation		0003677 // DNA binding // inferred from electronic annotation
AFFX-r2-TagA_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagA	Clone 76A3, synthetic insert (501 bp)+ poly A tail (21 bp), target sequence 1-501							
AFFX-r2-TagB_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagB	Clone 76A7, synthetic insert (467 bp)+ poly A tail (21 bp), target sequence 1-467							
AFFX-r2-TagC_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagC	Clone 76B3, synthetic insert (579 bp)+ poly A tail (21 bp), target sequence 1-579							
AFFX-r2-TagD_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagD	Clone 76B7, synthetic insert (519 bp)+ poly A tail (21 bp), target sequence 1-519							
AFFX-r2-TagE_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagE	Clone 76C1, synthetic insert (578 bp)+ poly A tail (21 bp), target sequence 1-578							
AFFX-r2-TagF_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagF	Clone 76C7, synthetic insert (660 bp)+ poly A tail (21 bp), target sequence 1-660							
AFFX-r2-TagG_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagG	Clone 76D3, synthetic insert (760 bp)+ poly A tail (21 bp), target sequence 1-760							
AFFX-r2-TagH_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagH	Clone 76E7, synthetic insert (848 bp)+ poly A tail (21 bp), target sequence 1-848							
AFFX-r2-TagIN-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagIN-3	Clone 84A3, synthetic insert (1944 bp)+ poly A tail (21 bp), 3 prime target sequence 1345-1944							
AFFX-r2-TagIN-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagIN-5	Clone 84A3, synthetic insert (1944 bp)+ poly A tail (21 bp), 5 prime target sequence 1-744							
AFFX-r2-TagIN-M_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagIN-M	Clone 84A3, synthetic insert (1944 bp)+ poly A tail (21 bp), middle target sequence 745-1344							
AFFX-r2-TagJ-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagJ-3	Clone 76F7, synthetic insert (960 bp)+ poly A tail (21 bp), 3 prime target sequence 361-960							
AFFX-r2-TagJ-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagJ-5	Clone 76F7, synthetic insert (960 bp)+ poly A tail (21 bp), 5 prime target sequence 1-360							
AFFX-r2-TagO-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagO-3	Clone 76G7, synthetic insert (999 bp)+ poly A tail (21 bp), 3 prime target sequence 400-999							
AFFX-r2-TagO-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagO-5	Clone 76G7, synthetic insert (999 bp)+ poly A tail (21 bp), 5 prime target sequence 1-399							
AFFX-r2-TagQ-3_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagQ-3	Clone 76H1, synthetic insert (1000 bp)+ poly A tail (21 bp), 3 prime target sequence 401-1000							
AFFX-r2-TagQ-5_at		--control	Oryza sativa	Mar 11, 2009	Consensus sequence	Affymetrix Proprietary Database	AFFX-r2-TagQ-5	Clone 76H1, synthetic insert (1000 bp)+ poly A tail (21 bp), 5 prime target sequence 1-400							

Os.10.1.S1_s_at	AU030384		Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AU030384	gb:AU030384 /DB_XREF=gi:3763632 /DB_XREF=AU030384 /CLONE=E50986_2Z /TID=Os.10.1 /CNT=3 /FEA=EST /TIER=ConsEnd /STK=0 /UG=Os.10 /UG_TITLE=Transcribed sequence with moderate similarity to protein sp:P49177 (A.thaliana) GBB_ARATH Guanine nucleotide-binding protein beta subunit /REP_ORG=O. sativa	Os03g0669200	Os03g0669200	4333680	NM_001057398		0009536 // plastid // inferred from reviewed computational analysis
Os.10003.1.S1_at	CF297014		Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	CF297014	gb:CF297014 /DB_XREF=gi:33666047 /DB_XREF=30DGS--07-K02.g1 /CLONE=30DGS--07-K02 /TID=Os.10003.1 /CNT=12 /FEA=mRNA /TIER=ConsEnd /STK=1 /UG=Os.10003 /UG_TITLE=(japonica cultivar-group) unnamed protein product (Gene), mRNA /REP_ORG=O. sativa	Os01g0235100	Os01g0235100	4327776	NM_001049054
Os.10007.2.S1_a_at	AK068366.1		Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK068366.1	gb:AK068366.1 /DB_XREF=gi:32978384 /TID=Os.10007.2 /CNT=5 /FEA=FLmRNA /TIER=FL /STK=1 /UG=Os.10007 /UG_TITLE=(japonica cultivar-group) cDNA clone:J023150P17, full insert sequence /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J013145B19, full insert sequence. /FL=gb:AK068366.1 /REP_ORG=O. sativa	Os06g0256200	Os06g0256200	4340675	NM_001063849			
Os.10017.1.S1_at	CB657305		Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	CB657305	gb:CB657305 /DB_XREF=gi:29661030 /DB_XREF=OSJNEc12I18.r /CLONE=OSJNEc12I18 /TID=Os.10017.1 /CNT=20 /FEA=mRNA /TIER=ConsEnd /STK=1 /UG=Os.10017 /UG_TITLE=(japonica cultivar-group) dnaJ-like protein (OJ1014_G12.15), mRNA /REP_ORG=O. sativa	Os01g0556400	Os01g0556400	4324566	NM_001049859		0009536 // plastid // inferred from reviewed computational analysis
Os.10038.1.S1_s_at	AU082861		Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AU082861	gb:AU082861 /DB_XREF=gi:7212558 /DB_XREF=AU082861 /CLONE=C12816 /TID=Os.10038.1 /CNT=3 /FEA=EST /TIER=ConsEnd /STK=1 /UG=Os.10038 /UG_TITLE=Transcribed sequences /REP_ORG=O. sativa	Os07g0153000	Os07g0153000	4342421	NM_001065445		0009536 // plastid // inferred from reviewed computational analysis
Os.10055.1.S1_at	AK111602.1		Oryza sativa	Mar 11, 2009	Consensus sequence	GenBank	AK111602.1	gb:AK111602.1 /DB_XREF=gi:37988265 /TID=Os.10055.1 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=1 /UG=Os.10055 /UG_TITLE=(japonica cultivar-group) unnamed protein product (Gene), mRNA /DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J013095J05, full insert sequence. /FL=gb:AK111602.1 /REP_ORG=O. sativa	Os01g0231500	Os01g0231500	4325891	NM_001049031			
!platform_table_end
