Gene_1_symbol(5end_fusion_partner)	Gene_2_symbol(3end_fusion_partner)	Fusion_description	Counts_of_common_mapping_reads	Spanning_pairs	Spanning_unique_reads	Longest_anchor_found	Fusion_finding_method	Fusion_point_for_gene_1(5end_fusion_partner)	Fusion_point_for_gene_2(3end_fusion_partner)	Gene_1_id(5end_fusion_partner)	Gene_2_id(3end_fusion_partner)	Exon_1_id(5end_fusion_partner)	Exon_2_id(3end_fusion_partner)	Fusion_sequence	Predicted_effect	Predicted_fused_transcripts	Predicted_fused_proteins
CLEC6A	CLEC4D	paralogs,adjacent,known,duplicates,10K<gap<100K,readthrough	0	11	4	25	BOWTIE	12:8465629:+	12:8515236:+	ENSG00000205846	ENSG00000166527	ENSE00001490820	ENSE00001103867	GATGGGAGCACATTTGGTTGTGTTCAACACAGAAGCAGAGCAG*TGGAAGGAGGCATGCATCCCCAGCTGATACCTTCGGTTATTGC	out-of-frame	ENST00000382073:555/ENST00000382064:180;ENST00000382073:555/ENST00000299665:222	MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPAWGCCPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFNTEAEQWKEACIPS;MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPAWGCCPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFNTEAEQWKEACIPS
CLEC6A	CLEC4D	paralogs,adjacent,known,duplicates,10K<gap<100K,readthrough	0	11	3	20	BOWTIE	12:8459698:+	12:8515236:+	ENSG00000205846	ENSG00000166527	ENSE00001490821	ENSE00001103867	CATTCAAGTCTCACCTGCTTCAGTGAAGGGACAAAGGTGCCAG*TGGAAGGAGGCATGCATCCCCAGCTGATACCTTCGGTTATTGC	in-frame	ENST00000382073:409/ENST00000382064:180;ENST00000382073:409/ENST00000299665:222	MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPVEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLG;MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPVEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN
CLEC6A	CLEC4D	paralogs,adjacent,known,duplicates,10K<gap<100K,readthrough	0	11	2	28	BOWTIE	12:8465629:+	12:8518164:+	ENSG00000205846	ENSG00000166527	ENSE00001490820	ENSE00001103860	GATGGGAGCACATTTGGTTGTGTTCAACACAGAAGCAGAGCAG*TGACTCATCACAACTTTTCACGCTGTAAGAGAGGCACAGGAGT	out-of-frame	ENST00000382073:555/ENST00000382064:273;ENST00000382073:555/ENST00000299665:315	MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPAWGCCPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFNTEAEQ;MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPAWGCCPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFNTEAEQ
CLEC6A	CLEC4D	paralogs,adjacent,known,duplicates,10K<gap<100K,readthrough	0	11	2	26	BOWTIE+BLAT;BOWTIE+STAR	12:8459698:+	12:8518164:+	ENSG00000205846	ENSG00000166527			CTCATATCATTCAAGTCTCACCTGCTTCAGTGAAGGGACAAAGGTGCCAG*TGACTCATCACAACTTTTCACGCTGTAAGAGAGGCACAGGAGTGCACAAG	in-frame	ENST00000382073:409/ENST00000382064:273;ENST00000382073:409/ENST00000299665:315	MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLG;MMQEQQPQSTEKRGWLSLRLWSVAGISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVPVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN
CLEC6A	CLEC4D	paralogs,adjacent,known,duplicates,10K<gap<100K,readthrough	0	11	2	21	BOWTIE	12:8465629:+	12:8513659:+	ENSG00000205846	ENSG00000166527	ENSE00001490820	ENSE00002277296	GATGGGAGCACATTTGGTTGTGTTCAACACAGAAGCAGAGCAG*AAATATACTCTGGGGGAAAAAAAATAGAACAAATTCTTGCCGT	CDS(truncated)/UTR		
LINC00458	AC005276.1	no_protein,lincrna	0	6	2	21	BOWTIE	13:54132613:-	7:125920057:+	ENSG00000234787	ENSG00000197462	ENSE00001664390	ENSE00001754599	CAGACTGACCAGCCCAAGGAACATCTCACCAATTTCAAATCTG*ATCTTCTCGGCTTAGCAGCTGAAGACTGACACTGGCCGATTGC	exonic(no-known-CDS)/exonic(no-known-CDS)		
EPT1	GUCY1A3	known	0	1	2	19	BOWTIE	2:26383347:+	4:155667346:+	ENSG00000138018	ENSG00000164116	ENSE00000962968	ENSE00002526853	CATTATGTGTGACTCTTCCAATGAGTTTATTAAACTTTTTCAG*TGCGGATTTGCGAGGCGCGCCCTGGAGCTGCTAGAGATCCGGA	CDS(truncated)/UTR		
