# This file created by conda-build 3.19.2
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Nov 12 09:45:49 2020
# ------------------------------------------------

package:
    name: bioconductor-chicago
    version: 1.18.0
source:
    md5: 773127bc58667690d35d6b1cc1710f7a
    url:
        - https://bioarchive.galaxyproject.org/Chicago_1.18.0.tar.gz
        - https://bioconductor.org/packages/3.12/bioc/src/contrib/Chicago_1.18.0.tar.gz
        - https://depot.galaxyproject.org/software/bioconductor-chicago/bioconductor-chicago_1.18.0_src_all.tar.gz
build:
    noarch: generic
    number: '0'
    rpaths:
        - lib/
        - lib/R/lib/
    string: r40_0
requirements:
    host:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 1_gnu
        - _r-mutex 1.0.1 anacondar_1
        - binutils_impl_linux-64 2.35 h18a2f87_9
        - binutils_linux-64 2.35 hc3fd857_29
        - bwidget 1.9.14 ha770c72_0
        - bzip2 1.0.8 h516909a_3
        - c-ares 1.16.1 h516909a_3
        - ca-certificates 2020.11.8 ha878542_0
        - cairo 1.16.0 h9f066cc_1006
        - curl 7.71.1 he644dc0_8
        - fontconfig 2.13.1 h7e3eb15_1002
        - freetype 2.10.4 h7ca028e_0
        - fribidi 1.0.10 h36c2ea0_0
        - gcc_impl_linux-64 9.3.0 h28f5a38_17
        - gcc_linux-64 9.3.0 h7247604_29
        - gettext 0.19.8.1 hf34092f_1004
        - gfortran_impl_linux-64 9.3.0 h2bb4189_17
        - gfortran_linux-64 9.3.0 ha1c937c_29
        - graphite2 1.3.13 h58526e2_1001
        - gsl 2.6 hf94e986_0
        - gxx_impl_linux-64 9.3.0 h53cdd4c_17
        - gxx_linux-64 9.3.0 h0d07fa4_29
        - harfbuzz 2.7.2 hb1ce69c_1
        - icu 67.1 he1b5a44_0
        - jpeg 9d h36c2ea0_0
        - kernel-headers_linux-64 2.6.32 h77966d4_13
        - krb5 1.17.1 hfafb76e_3
        - ld_impl_linux-64 2.35 h769bd43_9
        - libblas 3.9.0 2_openblas
        - libcblas 3.9.0 2_openblas
        - libcurl 7.71.1 hcdd3856_8
        - libedit 3.1.20191231 he28a2e2_2
        - libev 4.33 h516909a_1
        - libffi 3.2.1 he1b5a44_1007
        - libgcc-devel_linux-64 9.3.0 hfd08b2a_17
        - libgcc-ng 9.3.0 h5dbcf3e_17
        - libgfortran-ng 9.3.0 he4bcb1c_17
        - libgfortran5 9.3.0 he4bcb1c_17
        - libglib 2.66.2 hbe7bbb4_0
        - libgomp 9.3.0 h5dbcf3e_17
        - libiconv 1.16 h516909a_0
        - liblapack 3.9.0 2_openblas
        - libnghttp2 1.41.0 h8cfc5f6_2
        - libopenblas 0.3.12 pthreads_h4812303_1
        - libpng 1.6.37 h21135ba_2
        - libssh2 1.9.0 hab1572f_5
        - libstdcxx-devel_linux-64 9.3.0 h4084dd6_17
        - libstdcxx-ng 9.3.0 h2ae2ef3_17
        - libtiff 4.1.0 h4f3a223_6
        - libuuid 2.32.1 h14c3975_1000
        - libwebp-base 1.1.0 h36c2ea0_3
        - libxcb 1.13 h14c3975_1002
        - libxml2 2.9.10 h68273f3_2
        - lz4-c 1.9.2 he1b5a44_3
        - make 4.3 hd18ef5c_1
        - ncurses 6.2 h58526e2_3
        - openssl 1.1.1h h516909a_0
        - pango 1.42.4 h80147aa_5
        - pcre 8.44 he1b5a44_0
        - pcre2 10.35 h279444b_1
        - pixman 0.40.0 h36c2ea0_0
        - pthread-stubs 0.4 h14c3975_1001
        - r-acepack 1.4.1 r40h580db52_1006
        - r-assertthat 0.2.1 r40h6115d3f_2
        - r-backports 1.2.0 r40h9e2df91_0
        - r-base 4.0.3 hc603457_2
        - r-base64enc 0.1_3 r40hcdcec82_1004
        - r-brio 1.1.0 r40h9e2df91_1
        - r-callr 3.5.1 r40h142f84f_0
        - r-checkmate 2.0.0 r40hcdcec82_1
        - r-cli 2.1.0 r40h142f84f_0
        - r-cluster 2.1.0 r40h580db52_4
        - r-colorspace 2.0_0 r40h9e2df91_0
        - r-crayon 1.3.4 r40h6115d3f_1003
        - r-data.table 1.13.2 r40h0eb13af_0
        - r-delaporte 7.0.5 r40h30ea16f_1
        - r-desc 1.2.0 r40h6115d3f_1003
        - r-diffobj 0.3.2 r40h9e2df91_1
        - r-digest 0.6.27 r40h1b71b39_0
        - r-ellipsis 0.3.1 r40hcdcec82_0
        - r-evaluate 0.14 r40h6115d3f_2
        - r-fansi 0.4.1 r40hcdcec82_1
        - r-farver 2.0.3 r40h0357c0b_1
        - r-foreign 0.8_80 r40hcdcec82_0
        - r-formula 1.2_4 r40h142f84f_0
        - r-ggplot2 3.3.2 r40h6115d3f_0
        - r-glue 1.4.2 r40hcdcec82_0
        - r-gridextra 2.3 r40h6115d3f_1003
        - r-gtable 0.3.0 r40h6115d3f_3
        - r-highr 0.8 r40h6115d3f_2
        - r-hmisc 4.4_1 r40h580db52_1
        - r-htmltable 2.1.0 r40h6115d3f_0
        - r-htmltools 0.5.0 r40h0357c0b_0
        - r-htmlwidgets 1.5.2 r40h142f84f_0
        - r-isoband 0.2.2 r40h0357c0b_0
        - r-jpeg 0.1_8.1 r40hcdcec82_1
        - r-jsonlite 1.7.1 r40hcdcec82_0
        - r-knitr 1.30 r40h6115d3f_0
        - r-labeling 0.4.2 r40h142f84f_0
        - r-lattice 0.20_41 r40hcdcec82_2
        - r-latticeextra 0.6_29 r40h6115d3f_1
        - r-lifecycle 0.2.0 r40h6115d3f_1
        - r-magrittr 1.5 r40h6115d3f_1003
        - r-markdown 1.1 r40hcdcec82_1
        - r-mass 7.3_53 r40hcdcec82_0
        - r-matrix 1.2_18 r40h7fa42b6_3
        - r-matrixstats 0.57.0 r40hcdcec82_0
        - r-mgcv 1.8_33 r40h7fa42b6_0
        - r-mime 0.9 r40hcdcec82_1
        - r-munsell 0.5.0 r40h6115d3f_1003
        - r-nlme 3.1_150 r40h580db52_0
        - r-nnet 7.3_14 r40hcdcec82_1
        - r-pillar 1.4.6 r40h6115d3f_0
        - r-pkgbuild 1.1.0 r40h6115d3f_0
        - r-pkgconfig 2.0.3 r40h6115d3f_1
        - r-pkgload 1.1.0 r40h0357c0b_0
        - r-png 0.1_7 r40hcdcec82_1004
        - r-praise 1.0.0 r40h6115d3f_1004
        - r-prettyunits 1.1.1 r40h6115d3f_1
        - r-processx 3.4.4 r40hcdcec82_0
        - r-ps 1.4.0 r40h0eb13af_0
        - r-r6 2.5.0 r40hc72bb7e_0
        - r-rcolorbrewer 1.1_2 r40h6115d3f_1003
        - r-rcpp 1.0.4.6 r40h0357c0b_1
        - r-rematch2 2.1.2 r40h6115d3f_1
        - r-rlang 0.4.8 r40h9e2df91_0
        - r-rpart 4.1_15 r40hcdcec82_2
        - r-rprojroot 1.3_2 r40h6115d3f_1003
        - r-rstudioapi 0.12 r40hc72bb7e_0
        - r-scales 1.1.1 r40h6115d3f_0
        - r-stringi 1.5.3 r40h604b29c_0
        - r-stringr 1.4.0 r40h6115d3f_2
        - r-survival 3.2_7 r40hcdcec82_0
        - r-testthat 3.0.0 r40he524a50_0
        - r-tibble 3.0.4 r40h0eb13af_0
        - r-utf8 1.1.4 r40hcdcec82_1003
        - r-vctrs 0.3.4 r40hcdcec82_0
        - r-viridis 0.5.1 r40h6115d3f_1004
        - r-viridislite 0.3.0 r40h6115d3f_1003
        - r-waldo 0.2.3 r40hc72bb7e_0
        - r-withr 2.3.0 r40h6115d3f_0
        - r-xfun 0.19 r40h9e2df91_0
        - r-yaml 2.2.1 r40hcdcec82_1
        - r-zeallot 0.1.0 r40h6115d3f_1002
        - readline 8.0 he28a2e2_2
        - sed 4.8 hbfbb72e_0
        - sysroot_linux-64 2.12 h77966d4_13
        - tk 8.6.10 hed695b0_1
        - tktable 2.10 hb7b940f_3
        - xorg-kbproto 1.0.7 h14c3975_1002
        - xorg-libice 1.0.10 h516909a_0
        - xorg-libsm 1.2.3 h84519dc_1000
        - xorg-libx11 1.6.12 h516909a_0
        - xorg-libxau 1.0.9 h14c3975_0
        - xorg-libxdmcp 1.1.3 h516909a_0
        - xorg-libxext 1.3.4 h516909a_0
        - xorg-libxrender 0.9.10 h516909a_1002
        - xorg-renderproto 0.11.1 h14c3975_1002
        - xorg-xextproto 7.3.0 h14c3975_1002
        - xorg-xproto 7.0.31 h14c3975_1007
        - xz 5.2.5 h516909a_1
        - zlib 1.2.11 h516909a_1010
        - zstd 1.4.5 h6597ccf_2
    run:
        - r-base >=4.0,<4.1.0a0
        - r-data.table
        - r-delaporte
        - r-hmisc
        - r-mass
        - r-matrixstats
test:
    commands:
        - $R -e "library('Chicago')"
about:
    description: A pipeline for analysing Capture Hi-C data.
    home: https://bioconductor.org/packages/3.12/bioc/html/Chicago.html
    license: Artistic-2.0
    summary: 'CHiCAGO: Capture Hi-C Analysis of Genomic Organization'
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - biotools:chicago
