# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Nov  2 21:31:13 2019
# ------------------------------------------------

package:
    name: bioconductor-camthc
    version: 1.4.0
source:
    md5: 2f44e0d65707afb6e7c218cf6f7be80c
    url:
        - https://bioarchive.galaxyproject.org/CAMTHC_1.4.0.tar.gz
        - https://bioconductor.org/packages/3.10/bioc/src/contrib/CAMTHC_1.4.0.tar.gz
        - https://depot.galaxyproject.org/software/bioconductor-camthc/bioconductor-camthc_1.4.0_src_all.tar.gz
build:
    noarch: generic
    number: '0'
    rpaths:
        - lib/
        - lib/R/lib/
    string: r36_0
requirements:
    host:
        - _libgcc_mutex 0.1 main
        - _r-mutex 1.0.1 anacondar_1
        - binutils_impl_linux-64 2.31.1 h7fc9f1b_2
        - binutils_linux-64 2.31.1 h6176602_12
        - bioconductor-biobase 2.46.0 r36h516909a_0
        - bioconductor-biocgenerics 0.32.0 r36_0
        - bioconductor-biocparallel 1.20.0 r36he1b5a44_0
        - bioconductor-delayedarray 0.12.0 r36h516909a_0
        - bioconductor-genomeinfodb 1.22.0 r36_0
        - bioconductor-genomeinfodbdata 1.2.2 r36_0
        - bioconductor-genomicranges 1.38.0 r36h516909a_0
        - bioconductor-iranges 2.20.0 r36h516909a_0
        - bioconductor-s4vectors 0.24.0 r36h516909a_0
        - bioconductor-summarizedexperiment 1.16.0 r36_0
        - bioconductor-xvector 0.26.0 r36h516909a_0
        - bioconductor-zlibbioc 1.32.0 r36h516909a_0
        - bwidget 1.9.13 0
        - bzip2 1.0.8 h516909a_1
        - ca-certificates 2019.9.11 hecc5488_0
        - cairo 1.16.0 hfb77d84_1002
        - curl 7.65.3 hf8cf82a_0
        - fontconfig 2.13.1 h86ecdb6_1001
        - freetype 2.10.0 he983fc9_1
        - fribidi 1.0.5 h516909a_1002
        - gcc_impl_linux-64 7.3.0 habb00fd_2
        - gcc_linux-64 7.3.0 h553295d_12
        - gettext 0.19.8.1 hc5be6a0_1002
        - gfortran_impl_linux-64 7.3.0 hdf63c60_2
        - gfortran_linux-64 7.3.0 h553295d_12
        - glib 2.58.3 h6f030ca_1002
        - graphite2 1.3.13 hf484d3e_1000
        - gsl 2.5 h294904e_1
        - gxx_impl_linux-64 7.3.0 hdf63c60_2
        - gxx_linux-64 7.3.0 h553295d_12
        - harfbuzz 2.4.0 h9f30f68_3
        - icu 64.2 he1b5a44_1
        - jpeg 9c h14c3975_1001
        - krb5 1.16.3 h05b26f9_1001
        - libblas 3.8.0 14_openblas
        - libcblas 3.8.0 14_openblas
        - libcurl 7.65.3 hda55be3_0
        - libedit 3.1.20170329 hf8c457e_1001
        - libffi 3.2.1 he1b5a44_1006
        - libgcc-ng 9.1.0 hdf63c60_0
        - libgfortran-ng 7.3.0 hdf63c60_2
        - libiconv 1.15 h516909a_1005
        - liblapack 3.8.0 14_openblas
        - libopenblas 0.3.7 h6e990d7_2
        - libpng 1.6.37 hed695b0_0
        - libssh2 1.8.2 h22169c7_2
        - libstdcxx-ng 9.1.0 hdf63c60_0
        - libtiff 4.0.10 hfc65ed5_1004
        - libuuid 2.32.1 h14c3975_1000
        - libxcb 1.13 h14c3975_1002
        - libxml2 2.9.10 hee79883_0
        - lz4-c 1.8.3 he1b5a44_1001
        - make 4.2.1 h14c3975_2004
        - ncurses 6.1 hf484d3e_1002
        - openjdk 8.0.192 h14c3975_1003
        - openssl 1.1.1c h516909a_0
        - pango 1.42.4 ha030887_1
        - pcre 8.43 he1b5a44_0
        - pixman 0.38.0 h516909a_1003
        - pthread-stubs 0.4 h14c3975_1001
        - r-abind 1.4_5 r36h6115d3f_1002
        - r-apcluster 1.4.8 r36he1b5a44_0
        - r-assertthat 0.2.1 r36h6115d3f_1
        - r-backports 1.1.5 r36hcdcec82_0
        - r-base 3.6.1 hba50c9b_5
        - r-bh 1.69.0_1 r36h6115d3f_1
        - r-bibtex 0.4.2 r36hcdcec82_1003
        - r-bitops 1.0_6 r36hcdcec82_1003
        - r-catools 1.17.1.2 r36h0357c0b_1
        - r-class 7.3_15 r36hcdcec82_1001
        - r-cli 1.1.0 r36h6115d3f_2
        - r-cluster 2.1.0 r36h9bbef5b_2
        - r-codetools 0.2_16 r36h6115d3f_1001
        - r-colorspace 1.4_1 r36hcdcec82_1
        - r-corpcor 1.6.9 r36h6115d3f_1002
        - r-crayon 1.3.4 r36h6115d3f_1002
        - r-curl 4.2 r36hcdcec82_0
        - r-digest 0.6.22 r36h0357c0b_0
        - r-dmwr 0.4.1 r36h6115d3f_1002
        - r-doparallel 1.0.15 r36h6115d3f_0
        - r-ellipsis 0.3.0 r36hcdcec82_0
        - r-fansi 0.4.0 r36hcdcec82_1001
        - r-foreach 1.4.7 r36h6115d3f_0
        - r-formatr 1.7 r36h6115d3f_1
        - r-futile.logger 1.4.3 r36h6115d3f_1002
        - r-futile.options 1.0.1 r36h6115d3f_1001
        - r-gdata 2.18.0 r36h6115d3f_1002
        - r-geometry 0.4.4 r36h0357c0b_0
        - r-ggplot2 3.2.1 r36h6115d3f_0
        - r-glue 1.3.1 r36hcdcec82_1
        - r-gplots 3.0.1.1 r36h6115d3f_1
        - r-gridbase 0.4_7 r36h6115d3f_1002
        - r-gtable 0.3.0 r36h6115d3f_2
        - r-gtools 3.8.1 r36hcdcec82_1003
        - r-iterators 1.0.12 r36h6115d3f_0
        - r-kernsmooth 2.23_15 r36h9bbef5b_1004
        - r-labeling 0.3 r36h6115d3f_1002
        - r-lambda.r 1.2.4 r36h6115d3f_0
        - r-lattice 0.20_38 r36hcdcec82_1002
        - r-lazyeval 0.2.2 r36hcdcec82_1
        - r-linprog 0.9_2 r36h6115d3f_1
        - r-lpsolve 5.6.13.3 r36hcdcec82_0
        - r-magic 1.5_9 r36h6115d3f_1
        - r-magrittr 1.5 r36h6115d3f_1002
        - r-mass 7.3_51.4 r36hcdcec82_1
        - r-matrix 1.2_17 r36hcdcec82_1
        - r-matrixstats 0.55.0 r36hcdcec82_0
        - r-mgcv 1.8_29 r36hcdcec82_0
        - r-munsell 0.5.0 r36h6115d3f_1002
        - r-mvtnorm 1.0_11 r36h9bbef5b_2
        - r-nlme 3.1_141 r36h9bbef5b_1
        - r-nmf 0.21.0 r36h0357c0b_1003
        - r-nnls 1.4 r36h9bbef5b_1004
        - r-pcapp 1.9_73 r36h0357c0b_1001
        - r-pillar 1.4.2 r36h6115d3f_2
        - r-pkgconfig 2.0.3 r36h6115d3f_0
        - r-pkgmaker 0.27 r36h6115d3f_1001
        - r-plyr 1.8.4 r36h0357c0b_1003
        - r-quantmod 0.4_15 r36h6115d3f_1
        - r-r6 2.4.0 r36h6115d3f_2
        - r-rcolorbrewer 1.1_2 r36h6115d3f_1002
        - r-rcpp 1.0.2 r36h0357c0b_0
        - r-rcppprogress 0.4.1 r36h6115d3f_1
        - r-rcurl 1.95_4.12 r36hcdcec82_1
        - r-registry 0.5_1 r36h6115d3f_1
        - r-reshape2 1.4.3 r36h0357c0b_1004
        - r-rjava 0.9_11 r36hcdcec82_1
        - r-rlang 0.4.1 r36hcdcec82_0
        - r-rngtools 1.4 r36h6115d3f_1
        - r-rocr 1.0_7 r36h6115d3f_1002
        - r-rpart 4.1_15 r36hcdcec82_1
        - r-scales 1.0.0 r36h0357c0b_1002
        - r-snow 0.4_3 r36h6115d3f_1001
        - r-stringi 1.4.3 r36h0e574ca_3
        - r-stringr 1.4.0 r36h6115d3f_1
        - r-tibble 2.1.3 r36hcdcec82_1
        - r-ttr 0.23_5 r36hcdcec82_0
        - r-utf8 1.1.4 r36hcdcec82_1001
        - r-vctrs 0.2.0 r36hcdcec82_1
        - r-viridislite 0.3.0 r36h6115d3f_1002
        - r-withr 2.1.2 r36h6115d3f_1001
        - r-xtable 1.8_4 r36h6115d3f_2
        - r-xts 0.11_2 r36hcdcec82_1
        - r-zeallot 0.1.0 r36h6115d3f_1001
        - r-zoo 1.8_6 r36hcdcec82_1
        - readline 8.0 hf8c457e_0
        - sed 4.7 h1bed415_1000
        - tk 8.6.9 hed695b0_1003
        - tktable 2.10 h555a92e_3
        - xorg-kbproto 1.0.7 h14c3975_1002
        - xorg-libice 1.0.10 h516909a_0
        - xorg-libsm 1.2.3 h84519dc_1000
        - xorg-libx11 1.6.9 h516909a_0
        - xorg-libxau 1.0.9 h14c3975_0
        - xorg-libxdmcp 1.1.3 h516909a_0
        - xorg-libxext 1.3.4 h516909a_0
        - xorg-libxrender 0.9.10 h516909a_1002
        - xorg-renderproto 0.11.1 h14c3975_1002
        - xorg-xextproto 7.3.0 h14c3975_1002
        - xorg-xproto 7.0.31 h14c3975_1007
        - xz 5.2.4 h14c3975_1001
        - zlib 1.2.11 h516909a_1006
        - zstd 1.4.3 h3b9ef0a_0
    run:
        - bioconductor-biobase >=2.46.0,<2.47.0
        - bioconductor-biocparallel >=1.20.0,<1.21.0
        - bioconductor-summarizedexperiment >=1.16.0,<1.17.0
        - openjdk
        - r-apcluster
        - r-base >=3.6,<3.7.0a0
        - r-corpcor
        - r-dmwr
        - r-geometry
        - r-nmf
        - r-nnls
        - r-pcapp
        - r-rjava
test:
    commands:
        - $R -e "library('CAMTHC')"
about:
    description: An R package for tissue heterogeneity characterization by convex
        analysis of mixtures (CAM). It provides basic functions to perform unsupervised
        deconvolution on mixture expression profiles by CAM and some auxiliary functions
        to help understand the subpopulation-specific results. It also implements
        functions to perform supervised deconvolution based on prior knowledge of
        molecular markers, S matrix or A matrix. Combining molecular markers from
        CAM and from prior knowledge can achieve semi-supervised deconvolution of
        mixtures.
    home: https://bioconductor.org/packages/3.10/bioc/html/CAMTHC.html
    license: GPL-2
    license_file: /opt/conda/conda-bld/bioconductor-camthc_1572732483550/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/R/share/licenses/GPL-2
    summary: Convex Analysis of Mixtures for Tissue Heterogeneity Characterization
extra:
    copy_test_source_files: true
    final: true
