BioCor-package	BioCor-package
addSimilarities	addSimilarities
AintoB	AintoB
BioCor	BioCor-package
clusterGeneSim	clusterGeneSim
clusterGeneSim,character,character,GeneSetCollection-method	clusterGeneSim
clusterSim	clusterSim
clusterSim,character,character,GeneSetCollection-method	clusterSim
combinadic	combinadic
combineScores	combineScores
combineScoresPar	combineScores
combineSources	combineSources
conversions	conversions
D2J	conversions
diceSim	diceSim
duplicateIndices	duplicateIndices
geneSim	geneSim
geneSim,character,character,GeneSetCollection-method	geneSim
incidence,list-method	incidence-list-method
inverseList	inverseList
J2D	conversions
mclusterGeneSim	mclusterGeneSim
mclusterGeneSim,list,GeneSetCollection-method	mclusterGeneSim
mclusterSim	mclusterSim
mclusterSim,list,GeneSetCollection-method	mclusterSim
mgeneSim	mgeneSim
mgeneSim,character,GeneSetCollection-method	mgeneSim
mgeneSim,missing,GeneSetCollection-method	mgeneSim
mpathSim	mpathSim
mpathSim,character,GeneSetCollection,ANY-method	mpathSim
mpathSim,missing,GeneSetCollection,ANY-method	mpathSim
mpathSim,missing,list,ANY-method	mpathSim
mpathSim,missing,list,missing-method	mpathSim
pathSim	pathSim
pathSim,character,character,GeneSetCollection-method	pathSim
removeDup	removeDup
seq2mat	seq2mat
similarities	similarities
weighted	weighted
weighted.prod	weighted
weighted.sum	weighted
