accessors-methods	accessors-methods
alignSpectra	alignSpectra
AnalysisResults-class	AnalysisResults-class
ASICS	ASICS
ASICSResults-class	ASICSResults-class
ASICSUsersGuide	ASICSUsersGuide
binning	binning
c,ASICSResults-method	combineAndSubset-methods
c,PureLibrary-method	combineAndSubset-methods
c,Spectra-method	combineAndSubset-methods
c.ASICSResults	combineAndSubset-methods
c.PureLibrary	combineAndSubset-methods
c.Spectra	combineAndSubset-methods
combineAndSubset-methods	combineAndSubset-methods
createPureLibrary	createPureLibrary
createSpectra	createSpectra
dim,ASICSResults-method	summary-methods
dim,Spectra-method	summary-methods
dim.Spectra	summary-methods
formatForAnalysis	formatForAnalysis
getBestModel	accessors-methods
getBestModel,AnalysisResults-method	accessors-methods
getCVError	accessors-methods
getCVError,AnalysisResults-method	accessors-methods
getDataset	accessors-methods
getDataset,AnalysisResults-method	accessors-methods
getDeformedLibrary	accessors-methods
getDeformedLibrary,ASICSResults-method	accessors-methods
getMeanByGroup	accessors-methods
getMeanByGroup,AnalysisResults-method	accessors-methods
getNbProtons	accessors-methods
getNbProtons,PureLibrary-method	accessors-methods
getNormMethod	accessors-methods
getNormMethod,Spectra-method	accessors-methods
getNormParams	accessors-methods
getNormParams,Spectra-method	accessors-methods
getPpmGrid	accessors-methods
getPpmGrid,Spectra-method	accessors-methods
getQuantification	accessors-methods
getQuantification,ASICSResults-method	accessors-methods
getReconstructedSpectra	accessors-methods
getReconstructedSpectra,ASICSResults-method	accessors-methods
getResults	accessors-methods
getResults,AnalysisResults-method	accessors-methods
getSampleName	accessors-methods
getSampleName,Spectra-method	accessors-methods
getSpectra	accessors-methods
getSpectra,Spectra-method	accessors-methods
getTypeAnalysis	accessors-methods
getTypeAnalysis,AnalysisResults-method	accessors-methods
getTypeData	accessors-methods
getTypeData,AnalysisResults-method	accessors-methods
importSpectra	importSpectra
importSpectraBruker	importSpectraBruker
kruskalWallis	kruskalWallis
length,Spectra-method	summary-methods
length.Spectra	summary-methods
normaliseSpectra	normaliseSpectra
oplsda	oplsda
pca	pca
plot,AnalysisResults,ANY-method	visualisation-methods-analyses
plot,ASICSResults,ANY-method	visualisation-methods-spectra
plot,Spectra,ANY-method	visualisation-methods-spectra
plot.AnalysisResults	visualisation-methods-analyses
plot.ASICSResults	visualisation-methods-spectra
plot.Spectra	visualisation-methods-spectra
plotAlignment	plotAlignment
PureLibrary-class	PureLibrary-class
pure_library	pure_library
show,AnalysisResults-method	summary-methods
show,ASICSResults-method	summary-methods
show,Spectra-method	summary-methods
show.AnalysisResults	summary-methods
show.ASICSResults	summary-methods
show.Spectra	summary-methods
simulate_spectra	simulate_spectra
Spectra-class	Spectra-class
summary,AnalysisResults-method	summary-methods
summary,Spectra-method	summary-methods
summary-methods	summary-methods
summary.AnalysisResults	summary-methods
summary.Spectra	summary-methods
visualisation-methods-analyses	visualisation-methods-analyses
visualisation-methods-spectra	visualisation-methods-spectra
[,ASICSResults,ANY,ANY,ANY-method	combineAndSubset-methods
[,PureLibrary,ANY,ANY,ANY-method	combineAndSubset-methods
[,Spectra,ANY,ANY,ANY-method	combineAndSubset-methods
[.ASICSResults	combineAndSubset-methods
[.PureLibrary	combineAndSubset-methods
[.Spectra	combineAndSubset-methods
