{
  "channels": [
    "file:///opt/host-conda-bld",
    "https://conda.anaconda.org/conda-forge",
    "https://conda.anaconda.org/bioconda",
    "https://repo.anaconda.com/pkgs/main",
    "https://conda.anaconda.org/conda-forge",
    "https://conda.anaconda.org/bioconda",
    "https://repo.anaconda.com/pkgs/main"
  ],
  "conda_build_version": "3.21.8",
  "conda_private": false,
  "conda_version": "4.12.0",
  "description": "A differential abundance analysis for the comparison of two or more conditions. Useful for analyzing data from standard RNA-seq or meta-RNA-seq assays as well as selected and unselected values from in-vitro sequence selections. Uses a Dirichlet-multinomial model to infer abundance from counts, optimized for three or more experimental replicates. The method infers biological and sampling variation to calculate the expected false discovery rate, given the variation, based on a Wilcoxon Rank Sum test and Welch's t-test (via aldex.ttest), a Kruskal-Wallis test (via aldex.kw), a generalized linear model (via aldex.glm), or a correlation test (via aldex.corr). All tests report p-values and Benjamini-Hochberg corrected p-values. ALDEx2 also calculates expected standardized effect sizes for paired or unpaired study designs.",
  "env_vars": {
    "CIO_TEST": "<not set>"
  },
  "extra": {
    "copy_test_source_files": true,
    "final": true,
    "identifiers": [
      "biotools:aldex2"
    ],
    "parent_recipe": {
      "name": "bioconductor-aldex2",
      "path": "recipes/bioconductor-aldex2",
      "version": "1.12.0"
    }
  },
  "home": "https://bioconductor.org/packages/3.16/bioc/html/ALDEx2.html",
  "identifiers": [],
  "keywords": [],
  "license": "GPL (>= 3)",
  "license_file": "/opt/conda/conda-bld/bioconductor-aldex2_1667654042588/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/R/share/licenses/GPL-3",
  "root_pkgs": [
    "pkginfo 1.8.3 pyhd8ed1ab_0",
    "tqdm 4.64.1 pyhd8ed1ab_0",
    "libedit 3.1.20191231 he28a2e2_2",
    "backports 1.0 py_2",
    "libzlib 1.2.13 h166bdaf_4",
    "icu 70.1 h27087fc_0",
    "_openmp_mutex 4.5 2_gnu",
    "pkgutil-resolve-name 1.3.10 pyhd8ed1ab_0",
    "libssh2 1.10.0 haa6b8db_3",
    "attrs 22.1.0 pyh71513ae_1",
    "backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0",
    "bzip2 1.0.8 h7f98852_4",
    "libsqlite 3.39.4 h753d276_0",
    "expat 2.5.0 h27087fc_0",
    "certifi 2022.9.24 pyhd8ed1ab_0",
    "watchgod 0.8.2 pyhd8ed1ab_0",
    "wheel 0.37.1 pyhd8ed1ab_0",
    "libcurl 7.86.0 h7bff187_0",
    "sniffio 1.3.0 pyhd8ed1ab_0",
    "python-dateutil 2.8.2 pyhd8ed1ab_0",
    "setuptools 65.5.0 pyhd8ed1ab_0",
    "pcre2 10.37 hc3806b6_1",
    "patch 2.7.6 h7f98852_1002",
    "ca-certificates 2022.9.24 ha878542_0",
    "toolz 0.12.0 pyhd8ed1ab_0",
    "ripgrep 13.0.0 h2f28480_2",
    "pytz 2022.5 pyhd8ed1ab_0",
    "charset-normalizer 2.1.1 pyhd8ed1ab_0",
    "xz 5.2.6 h166bdaf_0",
    "keyutils 1.6.1 h166bdaf_0",
    "json5 0.9.5 pyh9f0ad1d_0",
    "libnsl 2.0.0 h7f98852_0",
    "krb5 1.19.3 h3790be6_0",
    "pycparser 2.21 pyhd8ed1ab_0",
    "lz4-c 1.9.3 h9c3ff4c_1",
    "libev 4.33 h516909a_1",
    "commonmark 0.9.1 py_0",
    "readline 8.1.2 h0f457ee_0",
    "git 2.38.1 pl5321h5fbbf19_0",
    "pybind11-abi 4 hd8ed1ab_3",
    "importlib_resources 5.10.0 pyhd8ed1ab_0",
    "libnghttp2 1.47.0 hdcd2b5c_1",
    "wcwidth 0.2.5 pyh9f0ad1d_2",
    "soupsieve 2.3.2.post1 pyhd8ed1ab_0",
    "glob2 0.7 py_0",
    "python-fastjsonschema 2.16.2 pyhd8ed1ab_0",
    "libarchive 3.5.2 hb890918_3",
    "joblib 1.2.0 pyhd8ed1ab_0",
    "ncurses 6.3 h27087fc_1",
    "curl 7.86.0 h7bff187_0",
    "libiconv 1.17 h166bdaf_0",
    "rich 12.6.0 pyhd8ed1ab_0",
    "tk 8.6.12 h27826a3_0",
    "libuuid 2.32.1 h7f98852_1000",
    "libffi 3.4.2 h7f98852_5",
    "c-ares 1.18.1 h7f98852_0",
    "su-exec 0.2 h166bdaf_1003",
    "reproc 14.2.3 h7f98852_0",
    "zstd 1.5.2 h6239696_4",
    "gettext 0.21.1 h27087fc_0",
    "six 1.16.0 pyh6c4a22f_0",
    "typing_extensions 4.4.0 pyha770c72_0",
    "patchelf 0.16.1 h58526e2_0",
    "libxml2 2.10.3 h7463322_0",
    "perl 5.32.1 2_h7f98852_perl5",
    "lzo 2.10 h516909a_1000",
    "traitlets 5.5.0 pyhd8ed1ab_0",
    "pygments 2.13.0 pyhd8ed1ab_0",
    "anyio 3.6.2 pyhd8ed1ab_0",
    "colorama 0.4.6 pyhd8ed1ab_0",
    "nbformat 5.7.0 pyhd8ed1ab_0",
    "ld_impl_linux-64 2.39 hc81fddc_0",
    "tzdata 2022e h191b570_0",
    "pyopenssl 22.1.0 pyhd8ed1ab_0",
    "reproc-cpp 14.2.3 h9c3ff4c_0",
    "libstdcxx-ng 12.2.0 h46fd767_19",
    "libgomp 12.2.0 h65d4601_19",
    "filelock 3.8.0 pyhd8ed1ab_0",
    "_libgcc_mutex 0.1 conda_forge",
    "tini 0.19.0 h166bdaf_1",
    "clyent 1.2.2 py_1",
    "dataclasses 0.8 pyhc8e2a94_3",
    "libgcc-ng 12.2.0 h65d4601_19",
    "toml 0.10.2 pyhd8ed1ab_0",
    "libsolv 0.7.22 h6239696_0",
    "prompt-toolkit 3.0.31 pyha770c72_0",
    "zipp 3.10.0 pyhd8ed1ab_0",
    "pip 22.3 pyhd8ed1ab_0",
    "yaml 0.2.5 h7f98852_2",
    "prompt_toolkit 3.0.31 hd8ed1ab_0",
    "pyparsing 3.0.9 pyhd8ed1ab_0",
    "xorg-libice 1.0.10 h7f98852_0",
    "font-ttf-inconsolata 3.000 h77eed37_0",
    "typing-extensions 4.4.0 hd8ed1ab_0",
    "yaml-cpp 0.6.3 he1b5a44_4",
    "ruamel 1.0 py37h89c1867_6",
    "markdown 3.4.1 pyhd8ed1ab_0",
    "pthread-stubs 0.4 h36c2ea0_1001",
    "jsonschema 2.6.0 py37_1002",
    "aiofiles 0.8.0 pyhd8ed1ab_0",
    "graphviz 6.0.1 h5abf519_0",
    "ruamel_yaml 0.15.80 py37h540881e_1007",
    "giflib 5.2.1 h36c2ea0_2",
    "aiohttp-security 0.4.0 py_0",
    "gdk-pixbuf 2.42.8 hff1cb4f_1",
    "snowballstemmer 2.2.0 pyhd8ed1ab_0",
    "markupsafe 2.0.1 py37h5e8e339_1",
    "font-ttf-dejavu-sans-mono 2.37 hab24e00_0",
    "imagesize 1.4.1 pyhd8ed1ab_0",
    "sphinxcontrib-serializinghtml 1.1.5 pyhd8ed1ab_2",
    "python 3.7.12 hb7a2778_100_cpython",
    "uritemplate 4.1.1 pyhd8ed1ab_0",
    "xorg-xextproto 7.3.0 h7f98852_1002",
    "asynctest 0.13.0 py_0",
    "graphite2 1.3.13 h58526e2_1001",
    "boltons 18.0.1 py_0",
    "libxcb 1.13 h7f98852_1004",
    "pixman 0.40.0 h36c2ea0_0",
    "xorg-xproto 7.0.31 h7f98852_1007",
    "psutil 5.9.3 py37h540881e_0",
    "xorg-libsm 1.2.3 hd9c2040_1000",
    "importlib-metadata 4.11.4 py37h89c1867_0",
    "liblapack 3.9.0 16_linux64_openblas",
    "cairo 1.16.0 ha61ee94_1014",
    "sphinxcontrib-htmlhelp 2.0.0 pyhd8ed1ab_0",
    "async-timeout 4.0.2 pyhd8ed1ab_0",
    "simplejson 3.17.6 py37h540881e_1",
    "conda-forge-pinning 2022.08.25.15.20.42 hd8ed1ab_0",
    "conda-build 3.21.8 py37h89c1867_1",
    "sphinxcontrib-applehelp 1.0.2 py_0",
    "cryptography 38.0.2 py37h38fbfac_1",
    "py-lief 0.12.2 py37hd23a5d3_0",
    "aiohttp 3.8.3 py37h540881e_0",
    "pyaml 17.12.1 py_0",
    "involucro 1.1.2 he881be0_3",
    "pysocks 1.7.1 py37h89c1867_5",
    "sqlite 3.39.4 h4ff8645_0",
    "conda 4.12.0 py37h89c1867_0",
    "libdeflate 1.14 h166bdaf_0",
    "requests 2.22.0 py37_1",
    "libopenblas 0.3.21 pthreads_h78a6416_3",
    "zlib 1.2.13 h166bdaf_4",
    "pyyaml 6.0 py37h540881e_4",
    "regex 2018.08.29 py37h14c3975_1000",
    "chardet 3.0.4 py37he5f6b98_1008",
    "cachetools 3.0.0 py_0",
    "xorg-libxau 1.0.9 h7f98852_0",
    "libmamba 0.21.2 h3985d26_0",
    "pandas 0.23.4 py37h04863e7_0",
    "sphinxcontrib-qthelp 1.0.3 py_0",
    "numpy 1.19.5 py37h3e96413_3",
    "packaging 21.3 pyhd8ed1ab_0",
    "jupyter_core 4.11.1 py37h89c1867_0",
    "libcblas 3.9.0 16_linux64_openblas",
    "libgfortran-ng 12.2.0 h69a702a_19",
    "sphinxcontrib-jsmath 1.0.1 py_0",
    "gitdb2 3.0.2 py_0",
    "future 0.18.2 py37h89c1867_5",
    "yarl 1.7.2 py37h540881e_2",
    "cached_property 1.5.2 pyha770c72_1",
    "pycosat 0.6.4 py37h540881e_0",
    "brotlipy 0.7.0 py37h540881e_1004",
    "jpeg 9e h166bdaf_2",
    "sphinxcontrib-devhelp 1.0.2 py_0",
    "gidgethub 3.0.0 py_0",
    "fontconfig 2.14.1 hc2a2eb6_0",
    "backoff 1.6.0 py_1",
    "conda-verify 3.1.1 py37h89c1867_1004",
    "libgfortran5 12.2.0 h337968e_19",
    "aioftp 0.12.0 py_0",
    "python-libarchive-c 4.0 py37h89c1867_1",
    "anaconda-client 1.6.14 py_0",
    "ruamel.yaml 0.16.5 py37h516909a_0",
    "boa 0.9.0 pyha770c72_0",
    "networkx 2.5.1 pyhd8ed1ab_0",
    "click-repl 0.2.0 pyhd8ed1ab_0",
    "libmambapy 0.21.2 py37hab1676c_0",
    "colorlog 3.1.4 py37_1000",
    "fonts-conda-forge 1 0",
    "click 8.1.3 py37h89c1867_0",
    "argh 0.26.2 pyh9f0ad1d_1002",
    "xorg-kbproto 1.0.7 h7f98852_1002",
    "libtiff 4.4.0 h55922b4_4",
    "frozenlist 1.3.1 py37h540881e_0",
    "kombu 5.2.4 py37h89c1867_1",
    "fonts-conda-ecosystem 1 0",
    "amqp 5.1.1 pyhd8ed1ab_0",
    "decorator 4.4.2 py_0",
    "fribidi 1.0.10 h36c2ea0_0",
    "libglib 2.74.1 h7a41b64_0",
    "freetype 2.12.1 hca18f0e_0",
    "pango 1.50.11 h382ae3d_0",
    "billiard 3.6.4.0 py37h540881e_2",
    "aiohttp-jinja2 1.1.2 py_0",
    "docutils 0.19 py37h89c1867_0",
    "librsvg 2.54.4 h7abd40a_0",
    "lerc 4.0.0 h27087fc_0",
    "libtool 2.4.6 h9c3ff4c_1008",
    "openssl 1.1.1s h166bdaf_0",
    "vine 5.0.0 pyhd8ed1ab_1",
    "atk-1.0 2.36.0 h3371d22_4",
    "libpng 1.6.38 h753d276_0",
    "gitpython 3.0.8 py_0",
    "aiohttp-session 2.7.0 py_0",
    "click-plugins 1.1.1 py_0",
    "aiosignal 1.2.0 pyhd8ed1ab_0",
    "celery 5.2.7 pyhd8ed1ab_0",
    "harfbuzz 5.3.0 h418a68e_0",
    "sphinx 5.1.1 pyhd8ed1ab_1",
    "multidict 6.0.2 py37h540881e_1",
    "gts 0.7.6 h64030ff_2",
    "conda-package-handling 1.9.0 py37h540881e_0",
    "font-ttf-ubuntu 0.83 hab24e00_0",
    "click-didyoumean 0.3.0 pyhd8ed1ab_0",
    "idna 2.8 py37_1000",
    "xorg-libxrender 0.9.10 h7f98852_1003",
    "mamba 0.21.2 py37h6dacc13_0",
    "libwebp 1.2.4 h522a892_0",
    "python_abi 3.7 2_cp37m",
    "pyjwt 2.6.0 pyhd8ed1ab_0",
    "smmap 5.0.0 pyhd8ed1ab_0",
    "jinja2 2.11.3 pyhd8ed1ab_2",
    "font-ttf-source-code-pro 2.038 h77eed37_0",
    "alabaster 0.7.12 py_0",
    "skopeo 0.1.35 haa36a5b_1",
    "libblas 3.9.0 16_linux64_openblas",
    "xorg-renderproto 0.11.1 h7f98852_1002",
    "smmap2 3.0.1 py_0",
    "urllib3 1.25.11 py_0",
    "xorg-libxext 1.3.4 h7f98852_1",
    "libgd 2.3.3 h18fbbfe_3",
    "gtk2 2.24.33 h90689f9_2",
    "beautifulsoup4 4.6.3 py37_1000",
    "xorg-libx11 1.7.2 h7f98852_0",
    "xorg-libxdmcp 1.1.3 h7f98852_0",
    "cached-property 1.5.2 hd8ed1ab_1",
    "sphinx-autodoc-typehints 1.19.2 pyhd8ed1ab_0",
    "galaxy-lib 19.5.2 pyh864c0ab_1",
    "libwebp-base 1.2.4 h166bdaf_0",
    "babel 2.10.3 pyhd8ed1ab_0",
    "cffi 1.15.1 py37h43b0acd_1",
    "liblief 0.12.2 h27087fc_0"
  ],
  "summary": "Analysis Of Differential Abundance Taking Sample Variation Into Account",
  "tags": []
}