# Data-Adaptive Statistics for High-Dimensional Multiple Testing

## Documentation for package ‘adaptest’ version 1.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

.adaptmle | Constructor for class adaptmle
adaptest | Data-adaptive Statistics for High-Dimensional Multiple Testing
adapTMLE-class | Constructor for class adaptmle
bioadaptest | Data Adaptive Multiple Testing for Computational Biology
cv_param_est | Compute data-adaptive parameter estimate for a single cross-validation fold
data_adapt | S3-Style Constructor for Data Adaptive Parameter Class
get_composition | Decomposition tables of the data-adaptive parameter after data-mining
get_significant_biomarker | Extract statistically significant biomarkers
plot.data_adapt | Plot method for data_adapt objects
print.data_adapt | Print method for data_adapt objects
rank_DE | Compute ranking of biomarkers by sorting effect sizes
rank_ttest | Compute ranking of biomarkers by sorting t-test p-values
simulated_array | Simulated differential expression data with one exposure
simulated_treatment | Simulated differential expression data with one exposure
summary.data_adapt | Summary tables for data_adapt objects