ABSDataSet	ABSDataSet
ABSDataSet-class	ABSDataSet
ABSSeq	ABSSeq
ABSSeqlm	ABSSeqlm
aFoldcomplexDesign	aFoldcomplexDesign
callDEs	callDEs
callParameter	callParameter
callParameterwithoutReplicates	callParameterwithoutReplicates
counts	counts
counts,ABSDataSet-method	counts
counts<-	counts
counts<-,ABSDataSet,matrix-method	counts
estimateSizeFactorsForMatrix	estimateSizeFactorsForMatrix
excounts	excounts
excounts,ABSDataSet-method	excounts
excounts<-	excounts
excounts<-,ABSDataSet,matrix-method	excounts
genAFold	genAFold
groups	groups
groups,ABSDataSet-method	groups
groups<-	groups
groups<-,ABSDataSet,factor-method	groups
LevelstoNormFC	LevelstoNormFC
LevelstoNormFC,ABSDataSet-method	LevelstoNormFC
LevelstoNormFC<-	LevelstoNormFC
LevelstoNormFC<-,ABSDataSet,numeric-method	LevelstoNormFC
maxRates	maxRates
maxRates,ABSDataSet-method	maxRates
maxRates<-	maxRates
maxRates<-,ABSDataSet,numeric-method	maxRates
minimalDispersion	minimalDispersion
minimalDispersion,ABSDataSet-method	minimalDispersion
minimalDispersion<-	minimalDispersion
minimalDispersion<-,ABSDataSet,numeric-method	minimalDispersion
minRates	minRates
minRates,ABSDataSet-method	minRates
minRates<-	minRates
minRates<-,ABSDataSet,numeric-method	minRates
normalFactors	normalFactors
normMethod	normMethod
normMethod,ABSDataSet-method	normMethod
normMethod<-	normMethod
normMethod<-,ABSDataSet,character-method	normMethod
paired	paired
paired,ABSDataSet-method	paired
paired<-	paired
paired<-,ABSDataSet,logical-method	paired
plotDifftoBase	plotDifftoBase
qtotalNormalized	qtotalNormalized
ReplaceOutliersByMAD	ReplaceOutliersByMAD
results	results
results,ABSDataSet-method	results
sFactors	sFactors
sFactors,ABSDataSet-method	sFactors
sFactors<-	sFactors
sFactors<-,ABSDataSet,numeric-method	sFactors
simuN5	simuN5
SumInfo-class	ABSDataSet
[[<-,SumInfo,character,missing-method	ABSDataSet
