MANIFEST.in
README.md
setup.cfg
setup.py
biobb_adapters/__init__.py
biobb_adapters.egg-info/PKG-INFO
biobb_adapters.egg-info/SOURCES.txt
biobb_adapters.egg-info/dependency_links.txt
biobb_adapters.egg-info/not-zip-safe
biobb_adapters.egg-info/requires.txt
biobb_adapters.egg-info/top_level.txt
biobb_adapters/cwl/biobb_amber/amber_to_pdb.cwl
biobb_adapters/cwl/biobb_amber/cpptraj_randomize_ions.cwl
biobb_adapters/cwl/biobb_amber/leap_add_ions.cwl
biobb_adapters/cwl/biobb_amber/leap_build_linear_structure.cwl
biobb_adapters/cwl/biobb_amber/leap_gen_top.cwl
biobb_adapters/cwl/biobb_amber/leap_solvate.cwl
biobb_adapters/cwl/biobb_amber/nab_build_dna_structure.cwl
biobb_adapters/cwl/biobb_amber/parmed_cpinutil.cwl
biobb_adapters/cwl/biobb_amber/parmed_hmassrepartition.cwl
biobb_adapters/cwl/biobb_amber/pdb4amber.cwl
biobb_adapters/cwl/biobb_amber/pmemd_mdrun.cwl
biobb_adapters/cwl/biobb_amber/process_mdout.cwl
biobb_adapters/cwl/biobb_amber/process_minout.cwl
biobb_adapters/cwl/biobb_amber/sander_mdrun.cwl
biobb_adapters/cwl/biobb_amber/ambpdb/amber_to_pdb.cwl
biobb_adapters/cwl/biobb_amber/cpptraj/cpptraj_randomize_ions.cwl
biobb_adapters/cwl/biobb_amber/leap/leap_add_ions.cwl
biobb_adapters/cwl/biobb_amber/leap/leap_build_linear_structure.cwl
biobb_adapters/cwl/biobb_amber/leap/leap_gen_top.cwl
biobb_adapters/cwl/biobb_amber/leap/leap_solvate.cwl
biobb_adapters/cwl/biobb_amber/nap/nab_build_dna_structure.cwl
biobb_adapters/cwl/biobb_amber/parmed/parmed_cpinutil.cwl
biobb_adapters/cwl/biobb_amber/parmed/parmed_hmassrepartition.cwl
biobb_adapters/cwl/biobb_amber/pdb4amber/pdb4amber.cwl
biobb_adapters/cwl/biobb_amber/pmemd/pmemd_mdrun.cwl
biobb_adapters/cwl/biobb_amber/process/process_mdout.cwl
biobb_adapters/cwl/biobb_amber/process/process_minout.cwl
biobb_adapters/cwl/biobb_amber/sander/sander_mdrun.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_average.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_bfactor.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_convert.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_dry.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_image.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_mask.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_rgyr.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_rms.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_rmsf.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_slice.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_snapshot.cwl
biobb_adapters/cwl/biobb_analysis/cpptraj_strip.cwl
biobb_adapters/cwl/biobb_analysis/gmx_cluster.cwl
biobb_adapters/cwl/biobb_analysis/gmx_energy.cwl
biobb_adapters/cwl/biobb_analysis/gmx_image.cwl
biobb_adapters/cwl/biobb_analysis/gmx_rgyr.cwl
biobb_adapters/cwl/biobb_analysis/gmx_rms.cwl
biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str.cwl
biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str_ens.cwl
biobb_adapters/cwl/biobb_analysis/gmx_trjconv_trj.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_average.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_bfactor.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_convert.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_dry.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_image.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_mask.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rgyr.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rms.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rmsf.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_slice.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_snapshot.cwl
biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_strip.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_cluster.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_energy.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_image.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rgyr.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rms.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str_ens.cwl
biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_trj.cwl
biobb_adapters/cwl/biobb_analysis/test/cwl_unitest.sh
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_average.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_bfactor.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_convert.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_dry.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_image.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_mask.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rgyr.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rms.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rmsf.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_slice.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_snapshot.yml
biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_strip.yml
biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.parm.top
biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.traj.dcd
biobb_adapters/cwl/biobb_analysis/test/data/gromacs/energy.edr
biobb_adapters/cwl/biobb_analysis/test/data/gromacs/topology.tpr
biobb_adapters/cwl/biobb_analysis/test/data/gromacs/trajectory.trr
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_cluster.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_energy.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_image.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rgyr.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rms.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str_ens.yml
biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_trj.yml
biobb_adapters/cwl/biobb_chemistry/acpype_params_ac.cwl
biobb_adapters/cwl/biobb_chemistry/acpype_params_cns.cwl
biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx.cwl
biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx_opls.cwl
biobb_adapters/cwl/biobb_chemistry/babel_add_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/babel_convert.cwl
biobb_adapters/cwl/biobb_chemistry/babel_minimize.cwl
biobb_adapters/cwl/biobb_chemistry/babel_remove_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/reduce_add_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/reduce_remove_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_ac.cwl
biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_cns.cwl
biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx.cwl
biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx_opls.cwl
biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_add_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_remove_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/babelm/babel_add_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/babelm/babel_convert.cwl
biobb_adapters/cwl/biobb_chemistry/babelm/babel_minimize.cwl
biobb_adapters/cwl/biobb_chemistry/babelm/babel_remove_hydrogens.cwl
biobb_adapters/cwl/biobb_chemistry/test/cwl_unitest.sh
biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_ac.yml
biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_cns.yml
biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx.yml
biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx_opls.yml
biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_add_hydrogens.yml
biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_remove_hydrogens.yml
biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_add_hydrogens.yml
biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_convert.yml
biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_minimize.yml
biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_remove_hydrogens.yml
biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.mol2
biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.pdb
biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.H.pdb
biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.no.H.pdb
biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.H.pdb
biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.minimize.pdb
biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.no.H.pdb
biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.smi
biobb_adapters/cwl/biobb_cmip/cmip.cwl
biobb_adapters/cwl/biobb_cmip/titration.cwl
biobb_adapters/cwl/biobb_io/api_binding_site.cwl
biobb_adapters/cwl/biobb_io/binding_site.cwl
biobb_adapters/cwl/biobb_io/canonical_fasta.cwl
biobb_adapters/cwl/biobb_io/drugbank.cwl
biobb_adapters/cwl/biobb_io/ideal_sdf.cwl
biobb_adapters/cwl/biobb_io/ligand.cwl
biobb_adapters/cwl/biobb_io/memprotmd_sim.cwl
biobb_adapters/cwl/biobb_io/memprotmd_sim_list.cwl
biobb_adapters/cwl/biobb_io/memprotmd_sim_search.cwl
biobb_adapters/cwl/biobb_io/mmcif.cwl
biobb_adapters/cwl/biobb_io/pdb.cwl
biobb_adapters/cwl/biobb_io/pdb_cluster_zip.cwl
biobb_adapters/cwl/biobb_io/pdb_variants.cwl
biobb_adapters/cwl/biobb_io/structure_info.cwl
biobb_adapters/cwl/biobb_io/mmb_api/binding_site.cwl
biobb_adapters/cwl/biobb_io/mmb_api/canonical_fasta.cwl
biobb_adapters/cwl/biobb_io/mmb_api/drugbank.cwl
biobb_adapters/cwl/biobb_io/mmb_api/ideal_sdf.cwl
biobb_adapters/cwl/biobb_io/mmb_api/ligand.cwl
biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim.cwl
biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_list.cwl
biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_search.cwl
biobb_adapters/cwl/biobb_io/mmb_api/mmcif.cwl
biobb_adapters/cwl/biobb_io/mmb_api/pdb.cwl
biobb_adapters/cwl/biobb_io/mmb_api/pdb_cluster_zip.cwl
biobb_adapters/cwl/biobb_io/mmb_api/pdb_variants.cwl
biobb_adapters/cwl/biobb_io/mmb_api/structure_info.cwl
biobb_adapters/cwl/biobb_md/append_ligand.cwl
biobb_adapters/cwl/biobb_md/editconf.cwl
biobb_adapters/cwl/biobb_md/genion.cwl
biobb_adapters/cwl/biobb_md/genrestr.cwl
biobb_adapters/cwl/biobb_md/gmxselect.cwl
biobb_adapters/cwl/biobb_md/grompp.cwl
biobb_adapters/cwl/biobb_md/grompp_mdrun.cwl
biobb_adapters/cwl/biobb_md/make_ndx.cwl
biobb_adapters/cwl/biobb_md/mdrun.cwl
biobb_adapters/cwl/biobb_md/ndx2resttop.cwl
biobb_adapters/cwl/biobb_md/pdb2gmx.cwl
biobb_adapters/cwl/biobb_md/solvate.cwl
biobb_adapters/cwl/biobb_md/gromacs/editconf.cwl
biobb_adapters/cwl/biobb_md/gromacs/genion.cwl
biobb_adapters/cwl/biobb_md/gromacs/genrestr.cwl
biobb_adapters/cwl/biobb_md/gromacs/grompp.cwl
biobb_adapters/cwl/biobb_md/gromacs/make_ndx.cwl
biobb_adapters/cwl/biobb_md/gromacs/mdrun.cwl
biobb_adapters/cwl/biobb_md/gromacs/pdb2gmx.cwl
biobb_adapters/cwl/biobb_md/gromacs/solvate.cwl
biobb_adapters/cwl/biobb_md/gromacs_extra/ndx2resttop.cwl
biobb_adapters/cwl/biobb_md/test/cwl_unitest.sh
biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.gro
biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.trr
biobb_adapters/cwl/biobb_md/test/data/gromacs/editconf.gro
biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.tpr
biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.zip
biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.gro
biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.ndx
biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.zip
biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.gro
biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.zip
biobb_adapters/cwl/biobb_md/test/data/gromacs/make_ndx.tpr
biobb_adapters/cwl/biobb_md/test/data/gromacs/mdrun.tpr
biobb_adapters/cwl/biobb_md/test/data/gromacs/pyruvate_kinase.pdb
biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.gro
biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.trr
biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.gro
biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.zip
biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.ndx
biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.zip
biobb_adapters/cwl/biobb_md/test/gromacs/editconf.yml
biobb_adapters/cwl/biobb_md/test/gromacs/genion.yml
biobb_adapters/cwl/biobb_md/test/gromacs/genrestr.yml
biobb_adapters/cwl/biobb_md/test/gromacs/grompp.yml
biobb_adapters/cwl/biobb_md/test/gromacs/make_ndx.yml
biobb_adapters/cwl/biobb_md/test/gromacs/mdrun.yml
biobb_adapters/cwl/biobb_md/test/gromacs/pdb2gmx.yml
biobb_adapters/cwl/biobb_md/test/gromacs/solvate.yml
biobb_adapters/cwl/biobb_md/test/gromacs_extra/ndx2resttop.yml
biobb_adapters/cwl/biobb_ml/agglomerative_clustering.cwl
biobb_adapters/cwl/biobb_ml/agglomerative_coefficient.cwl
biobb_adapters/cwl/biobb_ml/autoencoder_neural_network.cwl
biobb_adapters/cwl/biobb_ml/classification_neural_network.cwl
biobb_adapters/cwl/biobb_ml/classification_predict.cwl
biobb_adapters/cwl/biobb_ml/clustering_predict.cwl
biobb_adapters/cwl/biobb_ml/correlation_matrix.cwl
biobb_adapters/cwl/biobb_ml/dbscan.cwl
biobb_adapters/cwl/biobb_ml/decision_tree.cwl
biobb_adapters/cwl/biobb_ml/dendrogram.cwl
biobb_adapters/cwl/biobb_ml/drop_columns.cwl
biobb_adapters/cwl/biobb_ml/dummy_variables.cwl
biobb_adapters/cwl/biobb_ml/k_means.cwl
biobb_adapters/cwl/biobb_ml/k_means_coefficient.cwl
biobb_adapters/cwl/biobb_ml/k_neighbors.cwl
biobb_adapters/cwl/biobb_ml/k_neighbors_coefficient.cwl
biobb_adapters/cwl/biobb_ml/linear_regression.cwl
biobb_adapters/cwl/biobb_ml/logistic_regression.cwl
biobb_adapters/cwl/biobb_ml/map_variables.cwl
biobb_adapters/cwl/biobb_ml/neural_network_decode.cwl
biobb_adapters/cwl/biobb_ml/neural_network_predict.cwl
biobb_adapters/cwl/biobb_ml/oversampling.cwl
biobb_adapters/cwl/biobb_ml/pairwise_comparison.cwl
biobb_adapters/cwl/biobb_ml/pls_components.cwl
biobb_adapters/cwl/biobb_ml/pls_regression.cwl
biobb_adapters/cwl/biobb_ml/polynomial_regression.cwl
biobb_adapters/cwl/biobb_ml/principal_component.cwl
biobb_adapters/cwl/biobb_ml/random_forest_classifier.cwl
biobb_adapters/cwl/biobb_ml/random_forest_regressor.cwl
biobb_adapters/cwl/biobb_ml/recurrent_neural_network.cwl
biobb_adapters/cwl/biobb_ml/regression_neural_network.cwl
biobb_adapters/cwl/biobb_ml/regression_predict.cwl
biobb_adapters/cwl/biobb_ml/resampling.cwl
biobb_adapters/cwl/biobb_ml/scale_columns.cwl
biobb_adapters/cwl/biobb_ml/spectral_clustering.cwl
biobb_adapters/cwl/biobb_ml/spectral_coefficient.cwl
biobb_adapters/cwl/biobb_ml/support_vector_machine.cwl
biobb_adapters/cwl/biobb_ml/undersampling.cwl
biobb_adapters/cwl/biobb_ml/classification/classification_predict.cwl
biobb_adapters/cwl/biobb_ml/classification/decision_tree.cwl
biobb_adapters/cwl/biobb_ml/classification/k_neighbors.cwl
biobb_adapters/cwl/biobb_ml/classification/k_neighbors_coefficient.cwl
biobb_adapters/cwl/biobb_ml/classification/logistic_regression.cwl
biobb_adapters/cwl/biobb_ml/classification/random_forest_classifier.cwl
biobb_adapters/cwl/biobb_ml/classification/support_vector_machine.cwl
biobb_adapters/cwl/biobb_ml/clustering/agglomerative_clustering.cwl
biobb_adapters/cwl/biobb_ml/clustering/agglomerative_coefficient.cwl
biobb_adapters/cwl/biobb_ml/clustering/clustering_predict.cwl
biobb_adapters/cwl/biobb_ml/clustering/dbscan.cwl
biobb_adapters/cwl/biobb_ml/clustering/k_means.cwl
biobb_adapters/cwl/biobb_ml/clustering/k_means_coefficient.cwl
biobb_adapters/cwl/biobb_ml/clustering/spectral_clustering.cwl
biobb_adapters/cwl/biobb_ml/clustering/spectral_coefficient.cwl
biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_components.cwl
biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_regression.cwl
biobb_adapters/cwl/biobb_ml/dimensionality_reduction/principal_component.cwl
biobb_adapters/cwl/biobb_ml/neural_networks/autoencoder_neural_network.cwl
biobb_adapters/cwl/biobb_ml/neural_networks/classification_neural_network.cwl
biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_decode.cwl
biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_predict.cwl
biobb_adapters/cwl/biobb_ml/neural_networks/recurrent_neural_network.cwl
biobb_adapters/cwl/biobb_ml/neural_networks/regression_neural_network.cwl
biobb_adapters/cwl/biobb_ml/regression/linear_regression.cwl
biobb_adapters/cwl/biobb_ml/regression/polynomial_regression.cwl
biobb_adapters/cwl/biobb_ml/regression/random_forest_regressor.cwl
biobb_adapters/cwl/biobb_ml/regression/regression_predict.cwl
biobb_adapters/cwl/biobb_ml/resampling/oversampling.cwl
biobb_adapters/cwl/biobb_ml/resampling/resampling.cwl
biobb_adapters/cwl/biobb_ml/resampling/undersampling.cwl
biobb_adapters/cwl/biobb_ml/utils/correlation_matrix.cwl
biobb_adapters/cwl/biobb_ml/utils/dendrogram.cwl
biobb_adapters/cwl/biobb_ml/utils/drop_columns.cwl
biobb_adapters/cwl/biobb_ml/utils/dummy_variables.cwl
biobb_adapters/cwl/biobb_ml/utils/map_variables.cwl
biobb_adapters/cwl/biobb_ml/utils/pairwise_comparison.cwl
biobb_adapters/cwl/biobb_ml/utils/scale_columns.cwl
biobb_adapters/cwl/biobb_model/checking_log.cwl
biobb_adapters/cwl/biobb_model/fix_amides.cwl
biobb_adapters/cwl/biobb_model/fix_backbone.cwl
biobb_adapters/cwl/biobb_model/fix_chirality.cwl
biobb_adapters/cwl/biobb_model/fix_side_chain.cwl
biobb_adapters/cwl/biobb_model/mutate.cwl
biobb_adapters/cwl/biobb_model/model/checking_log.cwl
biobb_adapters/cwl/biobb_model/model/fix_amides.cwl
biobb_adapters/cwl/biobb_model/model/fix_backbone.cwl
biobb_adapters/cwl/biobb_model/model/fix_chirality.cwl
biobb_adapters/cwl/biobb_model/model/fix_side_chain.cwl
biobb_adapters/cwl/biobb_model/model/mutate.cwl
biobb_adapters/cwl/biobb_model/test/cwl_unitest.sh
biobb_adapters/cwl/biobb_model/test/data/model/2ki5.pdb
biobb_adapters/cwl/biobb_model/test/model/fix_side_chain.yml
biobb_adapters/cwl/biobb_model/test/model/mutate.yml
biobb_adapters/cwl/biobb_pmx/pmxanalyse.cwl
biobb_adapters/cwl/biobb_pmx/pmxgentop.cwl
biobb_adapters/cwl/biobb_pmx/pmxmutate.cwl
biobb_adapters/cwl/biobb_pmx/pmx/pmxanalyse.cwl
biobb_adapters/cwl/biobb_pmx/pmx/pmxgentop.cwl
biobb_adapters/cwl/biobb_pmx/pmx/pmxmutate.cwl
biobb_adapters/cwl/biobb_structure_utils/cat_pdb.cwl
biobb_adapters/cwl/biobb_structure_utils/extract_atoms.cwl
biobb_adapters/cwl/biobb_structure_utils/extract_chain.cwl
biobb_adapters/cwl/biobb_structure_utils/extract_heteroatoms.cwl
biobb_adapters/cwl/biobb_structure_utils/extract_model.cwl
biobb_adapters/cwl/biobb_structure_utils/extract_molecule.cwl
biobb_adapters/cwl/biobb_structure_utils/extract_protein.cwl
biobb_adapters/cwl/biobb_structure_utils/remove_ligand.cwl
biobb_adapters/cwl/biobb_structure_utils/remove_pdb_water.cwl
biobb_adapters/cwl/biobb_structure_utils/renumber_structure.cwl
biobb_adapters/cwl/biobb_structure_utils/sort_gro_residues.cwl
biobb_adapters/cwl/biobb_structure_utils/str_check_add_hydrogens.cwl
biobb_adapters/cwl/biobb_structure_utils/structure_check.cwl
biobb_adapters/cwl/biobb_structure_utils/test/cwl_unitest.sh
biobb_adapters/cwl/biobb_structure_utils/test/data/2vgb.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/G2S_stateA_frame92.sorted.gro
biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.gro
biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_WAT.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/cat_ligand.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/cat_protein.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/cl3.noH.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/extract_chain.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/extract_heteroatom.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/extract_model.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/extract_protein.pdb
biobb_adapters/cwl/biobb_structure_utils/test/data/pyruvate.gro
biobb_adapters/cwl/biobb_structure_utils/test/data/smallgro.gro
biobb_adapters/cwl/biobb_structure_utils/test/utils/cat_pdb.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_atoms.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_chain.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_heteroatoms.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_model.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_protein.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_ligand.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_pdb_water.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/renumber_structure.yml
biobb_adapters/cwl/biobb_structure_utils/test/utils/sort_gro_residues.yml
biobb_adapters/cwl/biobb_structure_utils/utils/cat_pdb.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/extract_atoms.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/extract_chain.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/extract_heteroatoms.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/extract_model.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/extract_protein.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/remove_ligand.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/remove_pdb_water.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/renumber_structure.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/sort_gro_residues.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/str_check_add_hydrogens.cwl
biobb_adapters/cwl/biobb_structure_utils/utils/structure_check.cwl
biobb_adapters/cwl/biobb_vs/autodock_vina.cwl
biobb_adapters/cwl/biobb_vs/autodock_vina_run.cwl
biobb_adapters/cwl/biobb_vs/bindingsite.cwl
biobb_adapters/cwl/biobb_vs/box.cwl
biobb_adapters/cwl/biobb_vs/box_residues.cwl
biobb_adapters/cwl/biobb_vs/extract_model_pdbqt.cwl
biobb_adapters/cwl/biobb_vs/fpocket.cwl
biobb_adapters/cwl/biobb_vs/fpocket_filter.cwl
biobb_adapters/cwl/biobb_vs/fpocket_run.cwl
biobb_adapters/cwl/biobb_vs/fpocket_select.cwl
biobb_adapters/cwl/biobb_vs/fpocket/fpocket.cwl
biobb_adapters/cwl/biobb_vs/fpocket/fpocket_filter.cwl
biobb_adapters/cwl/biobb_vs/fpocket/fpocket_select.cwl
biobb_adapters/cwl/biobb_vs/utils/bindingsite.cwl
biobb_adapters/cwl/biobb_vs/utils/box.cwl
biobb_adapters/cwl/biobb_vs/utils/box_residues.cwl
biobb_adapters/cwl/biobb_vs/utils/extract_model_pdbqt.cwl
biobb_adapters/cwl/biobb_vs/vina/autodock_vina.cwl
biobb_adapters/pycompss/__init__.py
biobb_adapters/pycompss/biobb_amber/__init__.py
biobb_adapters/pycompss/biobb_amber/ambpdb/__init__.py
biobb_adapters/pycompss/biobb_amber/ambpdb/amber_to_pdb.py
biobb_adapters/pycompss/biobb_amber/cphstats/__init__.py
biobb_adapters/pycompss/biobb_amber/cphstats/cestats_run.py
biobb_adapters/pycompss/biobb_amber/cphstats/cphstats_run.py
biobb_adapters/pycompss/biobb_amber/cpptraj/__init__.py
biobb_adapters/pycompss/biobb_amber/cpptraj/cpptraj_randomize_ions.py
biobb_adapters/pycompss/biobb_amber/leap/__init__.py
biobb_adapters/pycompss/biobb_amber/leap/leap_add_ions.py
biobb_adapters/pycompss/biobb_amber/leap/leap_build_linear_structure.py
biobb_adapters/pycompss/biobb_amber/leap/leap_gen_top.py
biobb_adapters/pycompss/biobb_amber/leap/leap_solvate.py
biobb_adapters/pycompss/biobb_amber/nab/__init__.py
biobb_adapters/pycompss/biobb_amber/nab/nab_build_dna_structure.py
biobb_adapters/pycompss/biobb_amber/parmed/__init__.py
biobb_adapters/pycompss/biobb_amber/parmed/parmed_cpinutil.py
biobb_adapters/pycompss/biobb_amber/parmed/parmed_hmassrepartition.py
biobb_adapters/pycompss/biobb_amber/pdb4amber/__init__.py
biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber.py
biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber_run.py
biobb_adapters/pycompss/biobb_amber/pmemd/__init__.py
biobb_adapters/pycompss/biobb_amber/pmemd/pmemd_mdrun.py
biobb_adapters/pycompss/biobb_amber/process/__init__.py
biobb_adapters/pycompss/biobb_amber/process/process_mdout.py
biobb_adapters/pycompss/biobb_amber/process/process_minout.py
biobb_adapters/pycompss/biobb_amber/sander/__init__.py
biobb_adapters/pycompss/biobb_amber/sander/sander_mdrun.py
biobb_adapters/pycompss/biobb_analysis/__init__.py
biobb_adapters/pycompss/biobb_analysis/ambertools/__init__.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot_pc.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip.py
biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/__init__.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_pc.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj.py
biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj_pc.py
biobb_adapters/pycompss/biobb_chemistry/__init__.py
biobb_adapters/pycompss/biobb_chemistry/acpype/__init__.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac_pc.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns_pc.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls_pc.py
biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_pc.py
biobb_adapters/pycompss/biobb_chemistry/ambertools/__init__.py
biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens.py
biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens_pc.py
biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens.py
biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens_pc.py
biobb_adapters/pycompss/biobb_chemistry/babelm/__init__.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens_pc.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert_pc.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize_pc.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens.py
biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens_pc.py
biobb_adapters/pycompss/biobb_cmip/__init__.py
biobb_adapters/pycompss/biobb_cmip/cmip/__init__.py
biobb_adapters/pycompss/biobb_cmip/cmip/cmip.py
biobb_adapters/pycompss/biobb_cmip/cmip/titration.py
biobb_adapters/pycompss/biobb_commons/__init__.py
biobb_adapters/pycompss/biobb_commons/task_config.py
biobb_adapters/pycompss/biobb_io/__init__.py
biobb_adapters/pycompss/biobb_io/api/__init__.py
biobb_adapters/pycompss/biobb_io/api/api_binding_site.py
biobb_adapters/pycompss/biobb_io/api/binding_site.py
biobb_adapters/pycompss/biobb_io/api/canonical_fasta.py
biobb_adapters/pycompss/biobb_io/api/drugbank.py
biobb_adapters/pycompss/biobb_io/api/ideal_sdf.py
biobb_adapters/pycompss/biobb_io/api/ligand.py
biobb_adapters/pycompss/biobb_io/api/ligand_pc.py
biobb_adapters/pycompss/biobb_io/api/memprotmd_sim.py
biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_list.py
biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_search.py
biobb_adapters/pycompss/biobb_io/api/mmcif.py
biobb_adapters/pycompss/biobb_io/api/pdb.py
biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip.py
biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip_pc.py
biobb_adapters/pycompss/biobb_io/api/pdb_pc.py
biobb_adapters/pycompss/biobb_io/api/pdb_variants.py
biobb_adapters/pycompss/biobb_io/api/pdb_variants_pc.py
biobb_adapters/pycompss/biobb_io/api/structure_info.py
biobb_adapters/pycompss/biobb_md/__init__.py
biobb_adapters/pycompss/biobb_md/gromacs/__init__.py
biobb_adapters/pycompss/biobb_md/gromacs/editconf.py
biobb_adapters/pycompss/biobb_md/gromacs/genion.py
biobb_adapters/pycompss/biobb_md/gromacs/genrestr.py
biobb_adapters/pycompss/biobb_md/gromacs/gmxselect.py
biobb_adapters/pycompss/biobb_md/gromacs/grompp.py
biobb_adapters/pycompss/biobb_md/gromacs/grompp_mdrun.py
biobb_adapters/pycompss/biobb_md/gromacs/make_ndx.py
biobb_adapters/pycompss/biobb_md/gromacs/mdrun.py
biobb_adapters/pycompss/biobb_md/gromacs/pdb2gmx.py
biobb_adapters/pycompss/biobb_md/gromacs/solvate.py
biobb_adapters/pycompss/biobb_md/gromacs_extra/__init__.py
biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand.py
biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand_pc.py
biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop.py
biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop_pc.py
biobb_adapters/pycompss/biobb_ml/__init__.py
biobb_adapters/pycompss/biobb_ml/classification/__init__.py
biobb_adapters/pycompss/biobb_ml/classification/classification_predict.py
biobb_adapters/pycompss/biobb_ml/classification/decision_tree.py
biobb_adapters/pycompss/biobb_ml/classification/k_neighbors.py
biobb_adapters/pycompss/biobb_ml/classification/k_neighbors_coefficient.py
biobb_adapters/pycompss/biobb_ml/classification/logistic_regression.py
biobb_adapters/pycompss/biobb_ml/classification/random_forest_classifier.py
biobb_adapters/pycompss/biobb_ml/classification/support_vector_machine.py
biobb_adapters/pycompss/biobb_ml/clustering/__init__.py
biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_clustering.py
biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_coefficient.py
biobb_adapters/pycompss/biobb_ml/clustering/clustering_predict.py
biobb_adapters/pycompss/biobb_ml/clustering/dbscan.py
biobb_adapters/pycompss/biobb_ml/clustering/k_means.py
biobb_adapters/pycompss/biobb_ml/clustering/k_means_coefficient.py
biobb_adapters/pycompss/biobb_ml/clustering/spectral_clustering.py
biobb_adapters/pycompss/biobb_ml/clustering/spectral_coefficient.py
biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/__init__.py
biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_components.py
biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_regression.py
biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/principal_component.py
biobb_adapters/pycompss/biobb_ml/neural_networks/__init__.py
biobb_adapters/pycompss/biobb_ml/neural_networks/autoencoder_neural_network.py
biobb_adapters/pycompss/biobb_ml/neural_networks/classification_neural_network.py
biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_decode.py
biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_predict.py
biobb_adapters/pycompss/biobb_ml/neural_networks/recurrent_neural_network.py
biobb_adapters/pycompss/biobb_ml/neural_networks/regression_neural_network.py
biobb_adapters/pycompss/biobb_ml/regression/__init__.py
biobb_adapters/pycompss/biobb_ml/regression/linear_regression.py
biobb_adapters/pycompss/biobb_ml/regression/polynomial_regression.py
biobb_adapters/pycompss/biobb_ml/regression/random_forest_regressor.py
biobb_adapters/pycompss/biobb_ml/regression/regression_predict.py
biobb_adapters/pycompss/biobb_ml/resampling/__init__.py
biobb_adapters/pycompss/biobb_ml/resampling/oversampling.py
biobb_adapters/pycompss/biobb_ml/resampling/resampling.py
biobb_adapters/pycompss/biobb_ml/resampling/undersampling.py
biobb_adapters/pycompss/biobb_ml/utils/__init__.py
biobb_adapters/pycompss/biobb_ml/utils/correlation_matrix.py
biobb_adapters/pycompss/biobb_ml/utils/dendrogram.py
biobb_adapters/pycompss/biobb_ml/utils/drop_columns.py
biobb_adapters/pycompss/biobb_ml/utils/dummy_variables.py
biobb_adapters/pycompss/biobb_ml/utils/map_variables.py
biobb_adapters/pycompss/biobb_ml/utils/pairwise_comparison.py
biobb_adapters/pycompss/biobb_ml/utils/scale_columns.py
biobb_adapters/pycompss/biobb_model/__init__.py
biobb_adapters/pycompss/biobb_model/model/__init__.py
biobb_adapters/pycompss/biobb_model/model/checking_log.py
biobb_adapters/pycompss/biobb_model/model/fix_amides.py
biobb_adapters/pycompss/biobb_model/model/fix_backbone.py
biobb_adapters/pycompss/biobb_model/model/fix_chirality.py
biobb_adapters/pycompss/biobb_model/model/fix_side_chain.py
biobb_adapters/pycompss/biobb_model/model/fix_side_chain_pc.py
biobb_adapters/pycompss/biobb_model/model/mutate.py
biobb_adapters/pycompss/biobb_model/model/mutate_pc.py
biobb_adapters/pycompss/biobb_pmx/__init__.py
biobb_adapters/pycompss/biobb_pmx/pmx/__init__.py
biobb_adapters/pycompss/biobb_pmx/pmx/analyse_pc.py
biobb_adapters/pycompss/biobb_pmx/pmx/gentop_pc.py
biobb_adapters/pycompss/biobb_pmx/pmx/mutate_bst_pc.py
biobb_adapters/pycompss/biobb_pmx/pmx/mutate_pc.py
biobb_adapters/pycompss/biobb_pmx/pmx/pmxanalyse.py
biobb_adapters/pycompss/biobb_pmx/pmx/pmxgentop.py
biobb_adapters/pycompss/biobb_pmx/pmx/pmxmutate.py
biobb_adapters/pycompss/biobb_structure_utils/__init__.py
biobb_adapters/pycompss/biobb_structure_utils/utils/__init__.py
biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb.py
biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_molecule.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein.py
biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand.py
biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water.py
biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structure.py
biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structures_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues.py
biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues_pc.py
biobb_adapters/pycompss/biobb_structure_utils/utils/str_check_add_hydrogens.py
biobb_adapters/pycompss/biobb_structure_utils/utils/structure_check.py
biobb_adapters/pycompss/biobb_vs/__init__.py
biobb_adapters/pycompss/biobb_vs/fpocket/__init__.py
biobb_adapters/pycompss/biobb_vs/fpocket/fpocket.py
biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_filter.py
biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_run.py
biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_select.py
biobb_adapters/pycompss/biobb_vs/utils/__init__.py
biobb_adapters/pycompss/biobb_vs/utils/bindingsite.py
biobb_adapters/pycompss/biobb_vs/utils/box.py
biobb_adapters/pycompss/biobb_vs/utils/box_residues.py
biobb_adapters/pycompss/biobb_vs/utils/extract_model_pdbqt.py
biobb_adapters/pycompss/biobb_vs/vina/__init__.py
biobb_adapters/pycompss/biobb_vs/vina/autodock_vina.py
biobb_adapters/pycompss/biobb_vs/vina/autodock_vina_run.py