Condensation	Condensation domain	20	Condensation.hmm
AMP-binding	Adenylation domain	20	AMP-binding.hmm
A-OX	Adenylation domain with integrated oxidase	500	A-OX.hmm
PP-binding	Thiolation domain	20	PP-binding.hmm
PKS_KS	Ketosynthase domain	50	PKS_KS.hmm
PKS_AT	Acyltransferase domain	50	PKS_AT.hmm
ATd	Trans-acyltransferase docking domain	65	ATd.hmm
bt1fas	Bacterial type I fatty acid synthase	50	bt1fas.hmm
ft1fas	Fungal type I fatty acid synthase	50	ft1fas.hmm
t2fas	Type II fatty acid synthase	50	t2fas.hmm
fabH	FabH fatty acid synthase	50	fabH.hmm
ene_KS	Enediyine ketosynthase	50	ene_KS.hmm
mod_KS	Modular ketosynthase	50	mod_KS.hmm
hyb_KS	Hybrid ketosynthase	50	hyb_KS.hmm
itr_KS	Iterative ketosynthase	50	itr_KS.hmm
tra_KS	Trans-AT ketosynthase	50	tra_KS.hmm
hglD	Unusual PKS HglD-like	50	hglD.hmm
hglE	Unusual PKS HglE-like	50	hglE.hmm
t2ks	Type II PKS ketosynthase	50	t2ks.hmm
t2pks2	Type II PKS ketosynthase, model 2	450	t2ks2.hmm
t2clf	Type II PKS Chain length factor	50	t2clf.hmm
Chal_sti_synt_N	Type III PKS N-terminal	21	Chal_sti_synt_N.hmm
Chal_sti_synt_C	Type III PKS C-terminal	21	Chal_sti_synt_C.hmm
phytoene_synt	Phytoene_synthase	20	phytoene_synt.hmm
Lycopene_cycl	Lycopene cyclase	80	Lycopene_cycl.hmm
dmat	Dimethylallyl tryptophan synthase	200	dmat.hmm
LANC_like	LanC-like lantibiotics biosynthesis protein	17	LANC_like.hmm
DUF4135	Lantibiotic-associated domain	150	PF13575.hmm
Lant_dehydr_N	Lantibiotic dehydratase, N-terminus	27	PF04738.hmm
Lant_dehydr_C	Lantibiotic dehydratase, C-terminus	27	PF14028.hmm
Flavoprotein	Lantibiotic aminovinly flavoprotein	20	PF02441.hmm
Trp_halogenase	Tryptophan halogenase	20	PF04820.hmm
p450	P450 oxygenase	21	PF00067.hmm
Pkinase	Protein kinase domain	30	PF00069.hmm
adh_short	Short-chain dehydrogenase	100	PF00106.hmm
adh_short_C2	Short-chain dehydrogenase, C-terminus	100	PF13561.hmm
PCMT	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	20	PF01135.hmm
Antimicr18	Lantibiotic antimicrobial peptide 18	20	Antimicrobial18.hmm
Gallidermin	Gallidermin	20	Gallidermin.hmm
L_biotic_A	Lantibiotic, type A	20	L_biotic_typeA.hmm
TIGR03731	Lantibiotic, gallidermin/nisin family	20	TIGR03731.hmm
leader_d	Lantibiotic leader lacticin 481 group	20	LE-LAC481.hmm
leader_eh	Lantibiotic leader mersacidin cinnamycin group	20	LE-MER+2PEP.hmm
leader_abc	Lantibiotic leader LanBC modified	20	LE-LanBC.hmm
mature_d	Lantibiotic peptide lacticin 481 group	20	MA-LAC481.hmm
mature_ab	Lantibiotic peptide nisin epidermin group	20	MA-NIS+EPI.hmm
mature_a	Lantibiotic peptide nisin group	20	MA-NIS.hmm
mature_b	Lantibiotic peptide epidermin group	25	MA-EPI.hmm
mature_ha	Lantibiotic peptide two component alpha	20	MA-2PEPA.hmm
mature_h_beta	Lantibiotic peptide two component beta	20	MA-2PEPB.hmm
lacticin_l	lantibiotic peptide lacticin 481 group (dufour et al)	20	LE-DUF.hmm
lacticin_mat	lantibiotic leader lacticin 481 group (dufour et al)	20	MA-DUF.hmm
LD_lanti_pre	FxLD family lantipeptide	20	TIGR04363.hmm
strep_PEQAXS	Streptomyces PEQAXS motif lantipeptide	20	strep_PEQAXS.hmm
strepbact	Putative Streptomyces bacteriocin	50	strepbact.hmm
Antimicrobial14	Antimicrobial peptide 14	90	Antimicrobial14.hmm
Bacteriocin_IIc	Bacteriocin_IIc domain	27	Bacteriocin_IIc.hmm
Bacteriocin_IId	Bacteriocin_IId domain	23	Bacteriocin_IId.hmm
BacteriocIIc_cy	Bacteriocin_IIdc_cydomain	92	BacteriocIIc_cy.hmm
Bacteriocin_II	Bacteriocin_II domain	40	Bacteriocin_II.hmm
Bacteriocin_IIi	Bacteriocin_IIi domain	56	Bacteriocin_IIi.hmm
Lactococcin	Lactococcin	24	Lactococcin.hmm
Antimicrobial17	Antimicrobial peptide 17	31	Antimicrobial17.hmm
Lactococcin_972	Lactococcin 972	25	Lactococcin_972.hmm
LcnG-beta	Lactococcin G-beta	78	LcnG-beta.hmm
Subtilosin_A	Subtilosin A	68	Subtilosin_A.hmm
Cloacin	Cloacin	27	Cloacin.hmm
Linocin_M18	Linocin M18	25	Linocin_M18.hmm
TIGR03651	Bacteriocin, circularin A/uberolysin famil	18	TIGR03651.hmm
TIGR03678	Bacteriocin, microcyclamide/patellamide family	35	TIGR03678.hmm
TIGR03693	Thiazole-containing bacteriocin maturation protein	400	TIGR03693.hmm
TIGR03798	Bacteriocin propeptide	20	TIGR03798.hmm
TIGR03882	Bacteriocin biosynthesis cyclodehydratase	150	TIGR03882.hmm
TIGR03601	Bacteriocin, BA_2677 family	50	TIGR03601.hmm
TIGR03795	Ribosomal natural product, two-chain TOMM family	41	TIGR03795.hmm
TIGR03793	NHLP leader peptide domain	51	TIGR03793.hmm
TIGR03975	Bacteriocin maturation radical SAM protein 1	282	TIGR03975.hmm
TIGR01193	ABC-type bacteriocin transporter	523	TIGR01193.hmm
mvnA	Microviridin A	25	mvnA.hmm
thiostrepton	Thiostrepton-like thiopeptides	20	thiostrepton.hmm
atropopeptide_p450	atropopeptide-specific cytochrome p450	500	atropopeptide_p450.hmm
BLS	Beta-lactam synthase	250	BLS.hmm
CAS	Clavulanic acid synthase-like	250	CAS.hmm
tabtoxin	Tabtoxin synthase-like	500	tabtoxin.hmm
DOIS	2-deoxy-scyllo-inosose synthase	500	DOIS.hmm
NeoL	NeoL-like deacetylase	50	neoL_like.hmm
SpcDK_glyc	SpcD-/SpcK-like thymidylyltransferas	600	spcDK_like_glyc.hmm
SpcFG	SpcF-/SpcG-like glycosyltransferase	200	spcFG_like.hmm
strH	StrH-like glycosyltransferase	200	strH_like.hmm
strK1	StrK-like phosphatase	800	strK_like1.hmm
strK2	StrK-like phosphatase	650	strK_like2.hmm
ValA	ValA-like 2-epi-5-epi-valiolone synthase	600	valA_like.hmm
salQ	2-epi-5-epi-valiolone synthase, SalQ-like	480	salQ.hmm
novK	NovK-like reductase	200	novK.hmm
novJ	NovJ-like reductase	350	novJ.hmm
novI	NovI-like cytochrome P450	600	novI.hmm
novH	NovH-like protein	750	novH.hmm
SpcDK_cou	SpcD/SpcK-like thymidylyltransferase, aminocoumarins group	600	spcDK_like_cou.hmm
IucA_IucC	Siderophore synthase	30	IucA_IucC.hmm
ectoine_synt	Ectoine synthase	35	ectoine_synt.hmm
AfsA	AfsA-like butyrolactone synthase	25	AfsA.hmm
indsynth	StaD-like chromopyrrolic acid synthase domain	100	indsynth.hmm
LipM	LipM-like nucleotidyltransferase	50	LipM.hmm
LipU	LipU-like protein	30	LipU.hmm
LipV	LipV-like dehydrogenase	375	LipV.hmm
TunD	TunD-like putative N-acetylglucosamine transferase	200	TunD.hmm
pur6	Pur6-like synthetase	200	pur6.hmm
pur10	Pur10-like oxidoreductase	600	pur10.hmm
nikJ	NikJ-like protein	200	nikJ.hmm
nikO	NikO-like enolpyruvyl transferase	400	nikO.hmm
MoeO5	MoeO5-like prenyl-3-phosphoglycerate synthase	65	MoeO5.hmm
moeGT	Phosphoglycolipid glycosyltransferase	100	moeGT.hmm
melC	MelC-like melanin synthase	40	melC.hmm
NAD_binding_4	NAD-binding domain 4	40	NAD_binding_4.hmm
LmbU	LmbU-like protein	50	LmbU.hmm
mmyO	MmyO-like protein	500	mmyO.hmm
AvrD	Pseudomonas avriulence D protein	50	PF05655.hmm
goadsporin_like	Goadsporin-like protein	500	goadsporin_like.hmm
LeupA	leupeptin A	580	LeupA.hmm
LeupB	leupeptin B	800	LeupB.hmm
LeupC	leupeptin C	450	LeupC.hmm
LeupD	leupeptin D	225	LeupD.hmm
TIGR03602	Bacteriocin protoxin, streptolysin S family	50	TIGR03602.hmm
TIGR03603	Bacteriocin biosynthesis cyclodehydratase	150	TIGR03603.hmm
TIGR03604	Bacteriocin biosynthesis docking scaffold	219	TIGR03604.hmm
TIGR03605	SagB-type dehydrogenase	200	TIGR03605.hmm
Neocarzinostat	Neocarzinostatin-like protein	28	Neocarzinostat.hmm
cyanobactin_synth	Cyanobactin protease	80	cyanobactin_synth.hmm
bcpB	BcpB-like phosphomutase	400	bcpB.hmm
frbD	FrbD-like phosphomutase	350	frbD.hmm
mitE	MitE-like CoA-ligase	400	mitE.hmm
vlmB	Valanimycin biosynthesis VlmB domain	250	vlmB.hmm
prnB	Pyrrolnitrin biosynthesis PrnB domain	200	prnB.hmm
CaiA	Nitrososynthase domain linked to oligosaccharide antibiotics	200	CaiA.hmm
MGT	Secondary metabolite-related glycosyltransferase	100	MGT.hmm
Glycos_transf_1	Secondary metabolite-related glycosyltransferase	20	Glycos_transf_1.hmm
Glycos_transf_2	Secondary metabolite-related glycosyltransferase	20	Glycos_transf_2.hmm
Glyco_transf_28	Secondary metabolite-related glycosyltransferase	26	Glyco_transf_28.hmm
DUF1205	Secondary metabolite-related glycosyltransferase	20	DUF1205.hmm
Autoind_synth	Autoinducer synthetase	20	Autoind_synth.hmm
YcaO	YcaO-like family	25	YcaO.hmm
TIGR01408	ubiquitin-activating enzyme E1	750	TIGR01408.hmm
PF06968	BATS family	20	PF06968.hmm
PF04055	radical SAM superfamily	40	PF04055.hmm
PF07366	SnoaL family	20	PF07366.hmm
thio_amide	nosA tpdK nocA berI pbtH	20	thio_amide.hmm
phzB	Phenazine biosynthesis gene	80	phzB.hmm
phosphonates-like	Phosphonate biosynthesis PEP mutase	275	phosphonates-like.hmm
phosphonates	Phosphonate biosynthesis PEP mutase	150	phosphonates.hmm
phosphonatesHydrolase	Phosphonopyruvate hydrolase	400	phosphonatesHydrolase.hmm
phosphonatesMeIsocitrateLyase	Methylisocitrate Lyase	250	phosphonatesMeIsocitrateLyase.hmm
2-Hacid_dh_C	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	25	2-Hacid_dh_C.hmm
Aldedh	Aldehyde dehydrogenase family	23	Aldedh.hmm
Aminotran_1_2	Aminotransferase class I and II	19	Aminotran_1_2.hmm
Aminotran_5	Aminotransferase class-V	21	Aminotran_5.hmm
AurF	P-aminobenzoate N-oxygenase AurF	29	AurF.hmm
CTP_transf_like	Cytidylyltransferase-like	21	CTP_transf_like.hmm
DUF4992	Domain of unknown function	29	DUF4992.hmm
Fe-ADH	Iron-containing alcohol dehydrogenase	26	Fe-ADH.hmm
Metallophos_2	Calcineurin-like phosphoesterase superfamily domain	27	Metallophos_2.hmm
NpaA	Nitrosuccinic acid synthase	600	NpaA.hmm
NpaB	Nitrosuccinic acid decarboxylase	200	NpaB.hmm
NpaC	Nitronate monooxygenase	400	NpaC.hmm
NTP_transf_3	MobA-like NTP transferase domain	27	NTP_transf_3.hmm
NTP_transf_5	Uncharacterised nucleotidyltransferase	31	NTP_transf_5.hmm
PALP	Pyridoxal-phosphate dependent enzyme	35	PALP.hmm
PEP_mutase	Phosphoenolpyruvate phosphomutase	31	PEP_mutase.hmm
TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	21	TPP_enzyme_C.hmm
TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	26	TPP_enzyme_N.hmm
bacilysin	Bacilysin-related amino acid ligase	160	bacilysin.hmm
subtilosin	Putative subtilosin biosynthesis enzyme ywiA	140	subtilosin.hmm
sublancin	Sublancin prepeptide	30	sublancin.hmm
thuricin	Thuricin prepeptide	30	thuricin.hmm
skfc	SkfC biosynthesis enzyme	70	skfc.hmm
botH	bottromycin biosynthesis enzyme	65	botH.hmm
glycocin	glycocin prepeptide	30	glycocin.hmm
mcjC	Microcin J25-processing protein McjC	60	mcjC.hmm
micJ25	Microcin J25 prepeptide	60	micJ25.hmm
DUF692	DUF692 domain of unknown function, associated with small prepeptides such as methanobactin	40	DUF692.hmm
lasso	Lasso peptide modification enzyme	400	lasso.hmm
mvd	Marinostatin/microviridin prepeptide	20	mvd_mst.hmm
cypemycin	Cypemycin prepeptide	20	cypemycin.hmm
cypI	cypemycin biosynthesis cypI enzyme	20	cypI.hmm
PoyD	proteusin biosynthesis PoyD enzyme	25	PoyD.hmm
CBM_48	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	20	PF02922.hmm
DegT_DnrJ_EryC1	DegT/DnrJ/EryC1/StrS aminotransferase family	19	PF01041.hmm
Alpha-amylase	Alpha amylase, catalytic domain	20	PF00128.hmm
dTDP_sugar_isom	dTDP-4-dehydrorhamnose 3,5-epimerase	20	PF00908.hmm
Polysacc_synt_2	Polysaccharide biosynthesis protein	20	PF02719.hmm
RmlD_sub_bind	RmlD substrate binding domain	20	PF04321.hmm
Polysacc_synt	Polysaccharide biosynthesis protein	23	PF01943.hmm
Alpha-amylase_C	Alpha amylase, C-terminal all-beta domain	21	PF02806.hmm
Epimerase_2	UDP-N-acetylglucosamine 2-epimerase	22	PF02350.hmm
Bac_transf	Bacterial sugar transferase	21	PF02397.hmm
Wzy_C	O-Antigen ligase	24	PF04932.hmm
Glyco_transf_9	Glycosyltransferase family 9 (heptosyltransferase)	20	PF01075.hmm
Glycos_transf_4	Glycosyl transferase family 4	21	PF00953.hmm
MannoseP_isomer	Mannose-6-phosphate isomerase	23	PF01050.hmm
Glyco_transf_8	Glycosyl transferase family 8	24	PF01501.hmm
Capsule_synth	Capsule polysaccharide biosynthesis protein	20	PF05159.hmm
Glyco_tran_28_C	Glycosyltransferase family 28 C-terminal domain	21	PF04101.hmm
Poly_export	Polysaccharide biosynthesis/export protein	26	PF02563.hmm
Glyco_transf_8C	Glycosyl transferase family 8 C-terminal	19	PF08437.hmm
PIG-L	GlcNAc-PI de-N-acetylase	22	PF02585.hmm
APE_KS1	Aryl polyene ketosynthase 1	50	APE_KS1.hmm
APE_KS2	Aryl polyene ketosynthase 2	50	APE_KS2.hmm
DarB	(Dialkyl)resorcinol-associated ketosynthase	50	DarB.hmm
FabF	FabF	50	FabF.hmm
ksIII	CerJ-like KSIII enzyme	50	ksIII.hmm
hr-t2pks-ksa	Highly reducing PKS type II ketosynthase alpha	200	hr-t2pks-ksa.hmm
ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	20	PF00109.hmm
PUFA_KS	Polyunsaturated fatty acid ketosynthase	50	PUFA_KS.hmm
PF13471	Transglut_core3 domain	22	PF13471.hmm
Asn_synthase	Asparagine synthase	21	PF00733.hmm
PF05402	PqqD / RRE protein	23	PF05402.hmm
orf2_PTase	Orf2-type phenol/phenazine prenyltransferase	50	orf2_PTase.hmm
indole_PTase	bacterial indole prenyltransferase	50	indole_PTase.hmm
ubiA	UbiA prenyltransferase of lipoquinone biosynthesis	50	UbiA.hmm
pgm1	Pgm1-like peptide ligase	300	pgm1.hmm
pgm_amidino	Pgm-related amidinotransferase	300	pgm_amidino.hmm
PF00881	TOMM dehydrogenase	20	PF00881.hmm
Abhydrolase_6	Alpha/beta hydrolase family	27	PF12697.hmm
PF00561	Abhydrolase	20	PF00561.hmm
TIGR04404	SkfA: sporulation killing factor	45	TIGR04404.hmm
Peptidase_S8	Subtilase family	21	PF00082.hmm
Peptidase_M16	Insulinase (Peptidase family M16)	22	PF00675.hmm
Peptidase_S41	Peptidase family S41	21	PF03572.hmm
Peptidase_M16_C	Peptidase M16 inactive domain	20	PF05193.hmm
Peptidase_S28	Peptidase S28 serine carboxypeptiase	20	Peptidase_S28.hmm
Fer4_12	4Fe-4S single cluster domain	22	PF13353.hmm
Abi	CAAX protease self-immunity	21	PF02517.hmm
Peptidase_M50	Peptidase family M50	27	PF02163.hmm
Peptidase_S9	Prolyl oligopeptidase family	22	PF00326.hmm
Peptidase_C39	Peptidase C39 family	21	PF03412.hmm
ThiF	ThiF family	22	PF00899.hmm
NasY	Long-chain N-acyl amino acid synthase	20	NasY.hmm
FMO-like	Flavin-dependent monooxygenase	150	PF00743.hmm
DUF98	p-hydroxybenzoic acid synthase	21	PF01947.hmm
PpyS	PPY synthase	300	ppys.hmm
HMGL-like	HMGL-like Pyruvate carboxylase	30	PF00682.hmm
RimK	RimK-like ATP-grasp domain	21	PF08443.hmm
TIGR04424	Microcin B17-processing protein McbB	65	TIGR04424.hmm
TIGR01716	RGG quorum sensing regulator	37	TIGR01716.hmm
TP_methylase	Tetrapyrrole (Corrin/Porphyrin) methylases	28	TP_methylase.hmm
DUF3328	UstYa/UstYb-like monooxygenase	25	DUF3328.hmm
pop	fungal prolyl oligopeptidase	950	pop.hmm
ustH	fungal ustH-type gamma peptidase	450	ustH.hmm
truD	TruD pseudouridine synthase	120	truD.hmm
micKC	Lipolanthine biosynthesis protein	400	micKC.hmm
GATase_7	Glutamine amidotransferase domain	25	PF13537.hmm
TIGR03103	GNAT-family acetyltransferase	569	TIGR03103.hmm
TIGR03104	asparagine synthase family amidotransferase	570	TIGR03104.hmm
TIGR03106	hydrolase, peptidase M42 family	398	TIGR03106.hmm
Peptidase_M42	M42 glutamyl aminopeptidase	20	PF05343.hmm
CDPS	Cyclodipeptide synthase	27	PF16715.hmm
2OG-FeII_Oxy	2OG-Fe(II) oxygenase superfamily	22	PF03171.hmm
ATP-grasp	ATP-grasp domain	21	PF02222.hmm
Chor_lyase	Chorismate lyase	24	PF04345.hmm
Orn_DAP_Arg_deC	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	21	PF00278.hmm
Orn_Arg_deC_N	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	24	PF02784.hmm
GST_N_3	Glutathione S-transferase, N-terminal domain	22	PF13417.hmm
GST_C	Glutathione S-transferase, C-terminal domain	21	PF00043.hmm
Acyl-CoA_dh_N	Acyl-CoA dehydrogenase, N-terminal domain	23	PF02771.hmm
Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	33	PF02770.hmm
Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	22	PF00441.hmm
TIGR02278	PaaN-DH: phenylacetic acid degradation protein paaN	563	TIGR02278.hmm
TfuA	TfuA-like protein	26	PF07812.hmm
HopA1	HopA1 effector protein family	23	PF17914.hmm
APH	Phosphotransferase enzyme family	23	PF01636.hmm
PPDK_N	Pyruvate phosphate dikinase, AMP/ATP binding domain	20	PF01326.hmm
TIGR02353	Non-alpha poly amino acid condensation domain	423	TIGR02353.hmm
Aminotran_3	Aminotransferase class-III	31	PF00202.hmm
DXP_synthase_N	1-deoxy-D-xylulose-5-phosphate synthase	21	PF13292.hmm
Mac	Maltose acetyltransferase	22	PF12464.hmm
TIGR03973	SCIFF six Cys in fourty-five ranthipeptide precursor	50	TIGR03973.hmm
SCIFF	Six-cysteine peptide SCIFF	22	PF13165.hmm
TIGR04085	radical SAM additional 4Fe4S-binding SPASM domain	27	TIGR04085.hmm
SPASM	Iron-sulfur cluster-binding domain	21	PF13186.hmm
TIGR02111	coenzyme PQQ biosynthesis protein C	240	TIGR02111.hmm
TIGR03966	heme/flavin dehydrogenase, mycofactocin system	471	TIGR03966.hmm
TIGR04078	peptide modification radical SAM enzyme, YydG family	300	TIGR04078.hmm
rSAM_GlyRichRpt	GRRM system radical SAM/SPASM domain protein	310	TIGR04261.hmm
SAM_SPASM_FxsB	FxsB family radical SAM/SPASM domain protein	370	TIGR04269.hmm
rSAM_XyeB	XyeB family radical SAM/SPASM peptide maturase	450	TIGR04496.hmm
rSAM_pep_methan	TIGR04083 family peptide-modifying radical SAM enzyme	100	TIGR04083.hmm
PTHR43273	radical SAM/SPASM domain protein, sulfatase-maturase type	100	PTHR43273.hmm
methano_modCys	TIGR04165 family Cys-rich peptide	60	TIGR04165.hmm
yydH	Epipeptide metalloprotease yydH	400	yydH.hmm
TIGR04223	cyclic lactone autoinducer peptide	19	TIGR04223.hmm
AgrB	cyclic lactone autoinducer endopeptidase	23	PF04647.hmm
TIGR04103	nif11-class peptide radical SAM maturase 3	725	TIGR04103.hmm
Methyltransf_3	O-methyltransferase	22	PF01596.hmm
DHQ_synthase	3-dehydroquinate synthase	24	PF01761.hmm
Dala_Dala_lig_N	D-ala D-ala ligase N-terminus	34	PF01820.hmm
Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	24	PF07478.hmm
ATP-grasp_3	ATP-grasp domain	23	PF02655.hmm
Carbam_trans_N	Carbamoyltransferase N-terminus	24	PF02543.hmm
PhyH	Phytanoyl-CoA dioxygenase (PhyH)	20	PF05721.hmm
ADSI-DH	3-amino-2,3-dideoxy-scyllo-inositol 1-dehydrogenase	460	adsi_dh.hmm
ADH_N	Alcohol dehydrogenase GroES-like domain	21	PF08240.hmm
ADH_zinc_N	Zinc-binding dehydrogenase	32	PF00107.hmm
RCDPS	arginine-containing cyclic dipeptide synthase	500	rcdps.hmm
DIT1_PvcA	Pyoverdine/dityrosine biosynthesis protein	27	PF05141.hmm
TauD	Taurine catabolism dioxygenase TauD, TfdA family	27	PF02668.hmm
Transferase	Transferase family	20	PF02458.hmm
Fer2_4	2Fe-2S iron-sulfur cluster binding domain	22	PF13510.hmm
Fer2_BFD	BFD-like [2Fe-2S] binding domain	23	PF04324.hmm
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	26	PF07992.hmm
DAO	FAD dependent oxidoreductase	27	PF01266.hmm
Lanthipeptide_LanB_RRE	RRE-containing LanB protein in a class I lanthipeptide cluster	25	RREFam001.hmm
Stand_Alone_Lasso_RRE	Stand-alone RRE protein in a lasso peptide cluster	25	RREFam002.hmm
Lasso_Fused_RRE	RRE-containing fused peptidase in a lasso peptide cluster	25	RREFam003.hmm
Thiopeptide_F_RRE	RRE-containing F protein in a thiopeptide cluster	25	RREFam004.hmm
PqqD_RRE	RRE-containing protein in a pyrroloquinoline cluster	25	RREFam006.hmm
Cyanobactin_D_RRE	RRE-containing D protein in a cyanobactin cluster	25	RREFam007.hmm
Bottromycin_Methyltransferase_RRE	RRE-containing methyltransferase protein in a bottromycin cluster	25	RREFam008.hmm
Proteusin_Methyltransferase_RRE	RRE-containing methyltransferase in a proteusin cluster	25	RREFam009.hmm
Proteusin_Epimerase_RRE	RRE-containing epimerase in a proteusin cluster	25	RREFam010.hmm
Heterocycloanthracin_C_RRE	RRE-containing C protein in a heterocycloanthracin LAP cluster	25	RREFam011.hmm
Plantazolicin_C_RRE	RRE-containing discrete C protein in a plantazolicin LAP cluster	25	RREFam012.hmm
Goadsporin_CD_RRE	RRE-containing CD fusion protein in a goadsporin cluster	25	RREFam013.hmm
Cytolysin_C_RRE	RRE-containing discrete C protein in a SLS/cytolysin LAP cluster	25	RREFam014.hmm
NHLP_CD_RRE	RRE-containing CD fusion protein in a NHLP/Nif11 LAP cluster	25	RREFam015.hmm
Mycofactocin_RRE	Stand-alone RRE protein in a mycofactocin cluster	25	RREFam016.hmm
Pantocin_Microcin_RRE	RRE-containing E1-like protein in a pantocin/microcin cluster	25	RREFam017.hmm
Subtilosin_rSAM_RRE	RRE-containing rSAM protein in a subtilosin sactipeptide cluster	25	RREFam018.hmm
Thurincin_rSAM_RRE	RRE-containing rSAM protein in a thurincin sactipeptide cluster	25	RREFam019.hmm
Thuricin_rSAM_RRE	RRE-containing rSAM protein in a thuricin sactipeptide cluster	25	RREFam020.hmm
Other_Sactipeptide_rSAM_RRE	RRE-containing rSAM protein in a sactipeptide cluster	25	RREFam021.hmm
Streptide_RRE	RRE-containing rSAM enzyme in a streptide-like cluster	25	RREFam022.hmm
Quinohemoprotein_rSAM_RRE	RRE-containing rSAM protein in a quinohemoprotein cluster	25	RREFam023.hmm
Ranthipeptide_rSAM_RRE	RRE-containing rSAM protein in a ranthipeptide/SCIFF cluster	25	RREFam024.hmm
Trifolitoxin_RRE	RRE-containing protein in a trifolitoxin cluster	25	RREFam025.hmm
Thiaglutamate_G_RRE	RRE-peptidase fusion protein in a 3-thiaglutamate cluster	25	RREFam026.hmm
Thiaglutamate_I_RRE	RRE-DUF fusion protein in a 3-thiaglutamate cluster	25	RREFam027.hmm
Thiaglutamate_B_RRE	RRE-LanB fusion protein in a 3-thiaglutamate cluster	25	RREFam028.hmm
PlpY_RRE	Discrete RRE protein in an alpha-keto beta-amino acid containing peptide cluster	25	RREFam029.hmm
Cy_tandem	Duplicated cyclization domain found in siderophore clusters	350	Cy_tandem.hmm
EntA	2,3-dihydro-2,3-dihydroxybenzoic acid dehydrogenase	205	EntA.hmm
EntC	Isochorismate synthase	300	EntC.hmm
FbnL	DMAQ biosynthesis protein found in fabrubactin cluster	40	FbnL.hmm
FbnM	DMAQ biosynthesis protein found in fabrubactin cluster	180	FbnM.hmm
GrbD	Graminine biosynthesis protein found in gramibactin cluster	400	GrbD.hmm
GrbE	Graminine biosynthesis protein found in gramibactin cluster	250	GrbE.hmm
IBH_Asp	Interface-associated aspartate beta-hydroxylase	440	IBH_Asp.hmm
IBH_His	Interface-associated histidine beta-hydroxylase	470	IBH_His.hmm
SBH_Asp	Syringomycin-type aspartate beta-hydroxylase not in siderophores	500	SBH_Asp.hmm
TBH_Asp	T_E-associated aspartate beta-hydroxylase	420	TBH_Asp.hmm
CyanoBH_Asp1	Cyanobacterial siderophore Asp beta-hydroxylase (NRPS domain)	400	CyanoBH_Asp1.hmm
CyanoBH_Asp2	Cyanobacterial siderophore Asp beta-hydroxylase (standalone)	450	CyanoBH_Asp2.hmm
IPL	Isopyruvate lyase	110	IPL.hmm
Lys_monoox	Lysine N6-monooxygenase (Mycobactin-type)	300	Lys_monoox.hmm
Orn_monoox	Ornithine N5-monooxygenase (Pyoverdine-type)	415	Orn_monoox.hmm
KtzT	Heme-dependent piperazate synthase (10.1038/nchembio.2411) not in siderophores	200	KtzT.hmm
MetRS-like	Methionyl-tRNA synthase-like ligase (10.1038/s41467-021-27523-x) not in siderophores	360	MetRS-like.hmm
PvdO	Oxidoreductase in pyoverdine chromophore maturation	250	PvdO.hmm
PvdP	Tyrosinase enzyme in pyoverdine chromophore maturation	600	PvdP.hmm
SalSyn	Salicylate synthase	350	SalSyn.hmm
VbsL	PLP-dependent epimerase in vicibactin biosynthesis (10.1021/ja9056008)	570	VbsL.hmm
VibH_like	VibH-like standalone condensation domain	400	VibH_like.hmm
MbnC	Methanobactin maturation protein MbnC	150	MbnC.hmm
CntL	NAS synthase found in opine-like zincophore clusters	100	CntL.hmm
CntM	Staphylopine dehydrogenase found in opine-like zincophore clusters	100	CntM.hmm
AesA	N-((2S)-2-amino-2-carboxyethyl)-L-glutamate dehydrogenase involved in APCA biosynthesis	300	AesA.hmm
AesB	Pyridoxal-dependent decarboxylase involved in APCA biosynthesis	400	AesB.hmm
AesC	N-(2-amino-2-carboxyethyl)-L-glutamate synthase involved in APCA biosynthesis	420	AesC.hmm
4HBT_2	Hotdog fold Thioesterase-like superfamily	25	PF13279.hmm
CDPS_fung	Fungal cyclodipeptide synthase	100	CDPS_fung.hmm
GTP_cyclohydroI	GTP cyclohydrolase I	27	PF01227.hmm
PTPS	6-carboxy-5,6,7,8-tetrahydropterin synthase	22	PF01242.hmm
QueE	7-carboxy-7-deazaguanine synthase	22	QueE.hmm
QueC	7-cyano-7-deazaguanine synthase	22	PF06508.hmm
dpdA1	family of paralogs of tRNA guanosine transglycosylase genes	20	dpdA1.hmm
alpha_am_amid	L-aminoadipate-semialdehyde dehydrogenase	1030	TIGR03443.hmm
bTGT	homodimeric bacterial tRNA-guanine transglycosylases	22	bTGT.hmm
delta9_cd03505	delta9 desaturase	22	delta9_cd03505.hmm
delta12_cd03507	delta12 desaturase	22	delta12_cd03507.hmm
FAAL_cd05931	FAAL	20	FAAL_cd05931.hmm
PP-binding_2	Acyl-carrier	10	PF14573.hmm
Thioesterase	Thioesterase domain	26	PF00975.hmm
LPG_synthase_C	Phosphatidylglycerol lysyltransferase, C-terminal	27	PF09924.hmm
azdH	azdH	50	azdh.hmm
azdO	azdO/vlmO	50	azdO.hmm
Ketoacyl-synt_2	Ketoacyl-synt_2	25	PF13723.hmm
PT_phytoene_like	Prenyltransferase; Phytoene synthase like	20	PT_phytoene_like.hmm
PT_FPPS_like	Prenyltransferase; Farnesyl diphosphate synthase like	56	PT_FPPS_like.hmm
PT_HPP	Prenyltransferase; involved in isoprenoid quinone biosynthesis	139	PT_HPP.hmm
T1TS	Type 1 terpene synthase	15	T1TS.hmm
T1TS_KS	Type 1 terpene synthase; Ent-kaurene synthase type	200	T1TS_KS.hmm
T2TS	Type 2 terpene synthase	45	T2TS.hmm
TS_UbiA	UbiA type terpene synthase	117	TS_UbiA.hmm
HAD_2	Haloacid dehalogenase-like hydrolase	15	PF13419.hmm
TS_Pyr4	Pyr4 type terpene synthase	50	TS_Pyr4.hmm
Lycopene_cycl_fung	Lycopene cyclase domain; fungal	40	TIGR03462.hmm
IPPT	IPP transferase	24	PF01715.hmm
Lysine_decarbox	Possible lysine decarboxylase	27	PF03641.hmm
Amidohydro_1	Amidohydrolase family	25	PF01979.hmm
GFO_IDH_MocA	Oxidoreductase family, NAD-binding Rossmann fold	24	PF01408.hmm
GFO_IDH_MocA_C3	GFO/IDH/MocA C-terminal domain	27	PF22725.hmm
SIS_2	SIS domain	27	PF13580.hmm
