# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Jan 15 16:20:20 2024
# ------------------------------------------------

package:
  name: annotsv
  version: 3.3.9
source:
  sha256: 698db38f70aaf7e839fbe090fc647b5dd7584c71a9b6397e38bf5af83a4e4c44
  url: https://github.com/lgmgeo/AnnotSV/archive/refs/tags/v3.3.9.tar.gz
build:
  noarch: generic
  number: '0'
  run_exports:
    - annotsv >=3.3.9,<4.0a0
  string: py312hdfd78af_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - libgcc-ng 13.2.0 h807b86a_3
    - libgomp 13.2.0 h807b86a_3
    - make 4.3 hd18ef5c_1
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 hd590300_5
    - ca-certificates 2023.11.17 hbcca054_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 13.2.0 h807b86a_3
    - libgomp 13.2.0 h807b86a_3
    - libnsl 2.0.1 hd590300_0
    - libsqlite 3.44.2 h2797004_0
    - libuuid 2.38.1 h0b41bf4_0
    - libxcrypt 4.4.36 hd590300_1
    - libzlib 1.2.13 hd590300_5
    - ncurses 6.4 h59595ed_2
    - openssl 3.2.0 hd590300_1
    - pip 23.3.2 pyhd8ed1ab_0
    - python 3.12.1 hab00c5b_1_cpython
    - readline 8.2 h8228510_1
    - setuptools 69.0.3 pyhd8ed1ab_0
    - tk 8.6.13 noxft_h4845f30_101
    - tzdata 2023d h0c530f3_0
    - wheel 0.42.0 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
  run:
    - bcftools >=1.10
    - bedtools >=2.25
    - coreutils
    - curl
    - natsort >=7.1.1
    - openjdk >=8
    - pandas >=1.5.2
    - pyfaidx >=0.7.1
    - python >=3.8
    - tk >=8.5
    - tqdm >=4.64.1
    - unzip
test:
  commands:
    - AnnotSV -help
    - bash -n INSTALL_annotations.sh
    - variantconvert -h
about:
  home: https://github.com/lgmgeo/AnnotSV
  license: GPL-3.0-only
  license_family: GPL3
  license_file: License.txt
  summary: Annotation and Ranking of Structural Variation
extra:
  copy_test_source_files: true
  final: true
