# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Fri Apr 14 08:55:10 2023
# ------------------------------------------------

package:
  name: annotsv
  version: 3.3.4
source:
  sha256: 9fa4164e7df33304969bd595659995f413b09dff77325a61d73bfe4a020409d3
  url: https://github.com/lgmgeo/AnnotSV/archive/refs/tags/v3.3.4.tar.gz
build:
  noarch: generic
  number: '1'
  string: py311hdfd78af_1
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - make 4.3 hd18ef5c_1
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h7f98852_4
    - ca-certificates 2022.12.7 ha878542_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libnsl 2.0.0 h7f98852_0
    - libsqlite 3.40.0 h753d276_0
    - libuuid 2.38.1 h0b41bf4_0
    - libzlib 1.2.13 h166bdaf_4
    - ncurses 6.3 h27087fc_1
    - openssl 3.1.0 h0b41bf4_0
    - pip 23.0.1 pyhd8ed1ab_0
    - python 3.11.3 h2755cc3_0_cpython
    - readline 8.2 h8228510_1
    - setuptools 67.6.1 pyhd8ed1ab_0
    - tk 8.6.12 h27826a3_0
    - tzdata 2023c h71feb2d_0
    - wheel 0.40.0 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
  run:
    - bcftools >=1.10
    - bedtools >=2.25
    - coreutils
    - curl
    - natsort >=7.1.1
    - openjdk >=8
    - pandas >=1.5.2
    - pyfaidx >=0.7.1
    - python >=3.8
    - tk >=8.6.12,<8.7.0a0
    - tqdm >=4.64.1
    - unzip
test:
  commands:
    - AnnotSV -help
    - bash -n INSTALL_annotations.sh
    - variantconvert -h
about:
  home: https://github.com/lgmgeo/AnnotSV
  license: GPL-3.0
  license_file: License.txt
  summary: Annotation and Ranking of Structural Variation
extra:
  copy_test_source_files: true
  final: true
