org.bdgenomics.adam.sql

# Feature

###
Related Docs: object Feature | package sql

#### case class Feature(featureId: Option[String] = None, sampleId: Option[String] = None, name: Option[String] = None, source: Option[String] = None, featureType: Option[String] = None, contigName: Option[String] = None, start: Option[Long] = None, end: Option[Long] = None, strand: Option[String] = None, phase: Option[Int] = None, frame: Option[Int] = None, score: Option[Double] = None, geneId: Option[String] = None, transcriptId: Option[String] = None, exonId: Option[String] = None, aliases: Seq[String] = Seq(), parentIds: Seq[String] = Seq(), target: Option[String] = None, gap: Option[String] = None, derivesFrom: Option[String] = None, notes: Seq[String] = Seq(), dbxrefs: Seq[Dbxref] = Seq(), ontologyTerms: Seq[OntologyTerm] = Seq(), circular: Option[Boolean] = None, attributes: Map[String, String] = Map()) extends Product with Serializable

Linear Supertypes
Serializable, Serializable, Product, Equals, AnyRef, Any
Ordering

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2. By Inheritance

Inherited

1. Feature
2. Serializable
3. Serializable
4. Product
5. Equals
6. AnyRef
7. Any

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Visibility

1. Public
2. All

### Instance Constructors

1. #### new Feature(featureId: Option[String] = None, sampleId: Option[String] = None, name: Option[String] = None, source: Option[String] = None, featureType: Option[String] = None, contigName: Option[String] = None, start: Option[Long] = None, end: Option[Long] = None, strand: Option[String] = None, phase: Option[Int] = None, frame: Option[Int] = None, score: Option[Double] = None, geneId: Option[String] = None, transcriptId: Option[String] = None, exonId: Option[String] = None, aliases: Seq[String] = Seq(), parentIds: Seq[String] = Seq(), target: Option[String] = None, gap: Option[String] = None, derivesFrom: Option[String] = None, notes: Seq[String] = Seq(), dbxrefs: Seq[Dbxref] = Seq(), ontologyTerms: Seq[OntologyTerm] = Seq(), circular: Option[Boolean] = None, attributes: Map[String, String] = Map())

### Value Members

1. #### final def !=(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

2. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

3. #### final def ==(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

4. #### val aliases: Seq[String]

5. #### final def asInstanceOf[T0]: T0

   Definition Classes
     Any

6. #### val attributes: Map[String, String]

7. #### def canEqual(that: Any): Boolean

   Definition Classes
     Feature → Equals

8. #### val circular: Option[Boolean]

9. #### def clone(): AnyRef

   Attributes
     protected[java.lang]
   Definition Classes
     AnyRef
   Annotations
     @throws( ... )

10. #### val contigName: Option[String]

11. #### val dbxrefs: Seq[Dbxref]

12. #### val derivesFrom: Option[String]

13. #### val end: Option[Long]

14. #### final def eq(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

15. #### val exonId: Option[String]

16. #### val featureId: Option[String]

17. #### val featureType: Option[String]

18. #### def finalize(): Unit

    Attributes
      protected[java.lang]
    Definition Classes
      AnyRef
    Annotations
      @throws( classOf[java.lang.Throwable] )

19. #### val frame: Option[Int]

20. #### val gap: Option[String]

21. #### val geneId: Option[String]

22. #### final def getClass(): Class[_]

    Definition Classes
      AnyRef → Any

23. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
      Any

24. #### val name: Option[String]

25. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

26. #### val notes: Seq[String]

27. #### final def notify(): Unit

    Definition Classes
      AnyRef

28. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

29. #### val ontologyTerms: Seq[OntologyTerm]

30. #### val parentIds: Seq[String]

31. #### val phase: Option[Int]

32. #### def productArity: Int

    Definition Classes
      Feature → Product

33. #### def productElement(i: Int): Any

    Definition Classes
      Feature → Product

34. #### val sampleId: Option[String]

35. #### val score: Option[Double]

36. #### val source: Option[String]

37. #### val start: Option[Long]

38. #### val strand: Option[String]

39. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
      AnyRef

40. #### val target: Option[String]

41. #### def toAvro: formats.avro.Feature

42. #### val transcriptId: Option[String]

43. #### final def wait(): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

44. #### final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

45. #### final def wait(arg0: Long): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

### Inherited from Serializable

### Inherited from Product

### Inherited from Equals

### Inherited from AnyRef

### Inherited from Any

### Ungrouped