Perl 5 Examples
===============

MFE Prediction (flat interface)
-------------------------------

.. literalinclude:: ../../../examples/Perl5/helloworld_mfe.pl
   :encoding: latin-1
   :language: perl

MFE Prediction (object oriented interface)
------------------------------------------

.. literalinclude:: ../../../examples/Perl5/oo_example1.pl
   :encoding: latin-1
   :language: perl

MFE Consensus Structure Prediction
----------------------------------

.. literalinclude:: ../../../examples/Perl5/helloworld_mfe_comparative.pl
   :encoding: latin-1
   :language: perl

MFE Prediction (deviating from default settings)
------------------------------------------------

.. literalinclude:: ../../../examples/Perl5/helloworld_nondefault.pl
   :encoding: latin-1
   :language: perl

Fun with Soft Constraints
-------------------------

.. literalinclude:: ../../../examples/Perl5/maximum_matching.pl
   :encoding: latin-1
   :language: perl


.. toctree::
   :maxdepth: 1
   :caption: Contents:

