LICENSE.txt
MANIFEST.in
README.md
setup.cfg
setup.py
falcon_unzip/__init__.py
falcon_unzip/io.py
falcon_unzip/unzip.py
falcon_unzip.egg-info/PKG-INFO
falcon_unzip.egg-info/SOURCES.txt
falcon_unzip.egg-info/dependency_links.txt
falcon_unzip.egg-info/entry_points.txt
falcon_unzip.egg-info/requires.txt
falcon_unzip.egg-info/top_level.txt
falcon_unzip.egg-info/zip-safe
falcon_unzip/mains/__init__.py
falcon_unzip/mains/bam_partition_and_merge.py
falcon_unzip/mains/bam_segregate.py
falcon_unzip/mains/bam_segregate_gather.py
falcon_unzip/mains/bam_segregate_split.py
falcon_unzip/mains/cns_zcat.py
falcon_unzip/mains/db_to_ccs_id.py
falcon_unzip/mains/dedup_h_tigs.py
falcon_unzip/mains/fetch_reads.py
falcon_unzip/mains/gen_rid_gathered_json.py
falcon_unzip/mains/generic_gather.py
falcon_unzip/mains/get_ctg2bam_map.py
falcon_unzip/mains/get_read2ctg.py
falcon_unzip/mains/get_read_hctg_map.py
falcon_unzip/mains/graphs_to_h_tigs_2.py
falcon_unzip/mains/ovlp_filter_with_phase.py
falcon_unzip/mains/ovlp_filter_with_phase_strict.py
falcon_unzip/mains/phased_ovlp_to_graph.py
falcon_unzip/mains/phasing_gather.py
falcon_unzip/mains/phasing_generate_association_table.py
falcon_unzip/mains/phasing_get_phased_blocks.py
falcon_unzip/mains/phasing_get_phased_reads.py
falcon_unzip/mains/phasing_make_het_call.py
falcon_unzip/mains/phasing_readmap.py
falcon_unzip/mains/phasing_split.py
falcon_unzip/mains/polish_gather.py
falcon_unzip/mains/polish_read_to_ctg.py
falcon_unzip/mains/polish_split_fai.py
falcon_unzip/mains/polish_unphased_readmapping.py
falcon_unzip/mains/pr_ctg_track.py
falcon_unzip/mains/quiver_separate_gathered.py
falcon_unzip/mains/quiver_split.py
falcon_unzip/mains/remove_all.py
falcon_unzip/mains/rr_ctg_track.py
falcon_unzip/mains/rr_hctg_track.py
falcon_unzip/mains/select_reads_from_bam.py
falcon_unzip/mains/start_unzip.py
falcon_unzip/proto/__init__.py
falcon_unzip/proto/cigartools.py
falcon_unzip/proto/execute.py
falcon_unzip/proto/extract_phased_preads.py
falcon_unzip/proto/graphs_to_h_tigs_2_utils.py
falcon_unzip/proto/haplotig.py
falcon_unzip/proto/main_augment_pb.py
falcon_unzip/proto/phasing_block.py
falcon_unzip/proto/sam2m4.py
falcon_unzip/tasks/__init__.py
falcon_unzip/tasks/ccs.py
falcon_unzip/tasks/top.py
falcon_unzip/tasks/unzip.py
test/test_ccs.py
test/test_config.py
test/test_db_to_ccs_id.py
test/test_gen_rid_gathered_json.py
test/test_graphs_to_h_tigs_2.py
test/test_help.py
test/test_io.py
test/test_partition.py
test/test_phasing.py
test/test_polish_read_to_ctg.py
test/test_polish_unphased_readmapping.py
test/test_sam2m4.py
test/test_top.py