#!/usr/bin/env bash

export NCM_HOME=/opt/conda/conda-bld/ngscheckmate_1736805583753/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_/NGSCheckMate
echo "Set the path to your reference file with the NCM_REF environment variable"
echo "eg. export NCM_REF=/<path>/<to>/<reference>" 
echo
python /opt/conda/conda-bld/ngscheckmate_1736805583753/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_/NGSCheckMate/ncm.py "$@"
