recipe_sha: a7e0ef3800e530d0039f90535f17f2d4a16eeaaeeeadbee534525ea1d2381a5c  # The commit at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
log: |-
  BUILD START: ['mbg-1.0.14-hdf58011_2.tar.bz2']
  Reloading output folder: /opt/mambaforge/envs/bioconda/conda-bld

  ## Package Plan ##

    environment location: /opt/mambaforge/envs/bioconda/conda-bld/mbg_1685384925071/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_


  The following NEW packages will be INSTALLED:

      libcxx:  16.0.4-hd57cbcb_0 conda-forge
      libzlib: 1.2.13-hfd90126_4 conda-forge
      zlib:    1.2.13-hfd90126_4 conda-forge

  Preparing transaction: ...working... done
  Verifying transaction: ...working... done
  Executing transaction: ...working... done
  Reloading output folder: /opt/mambaforge/envs/bioconda/conda-bld
  Reloading output folder: /opt/mambaforge/envs/bioconda/conda-bld

  ## Package Plan ##

    environment location: /opt/mambaforge/envs/bioconda/conda-bld/mbg_1685384925071/_build_env


  The following NEW packages will be INSTALLED:

      ca-certificates:    2023.5.7-h8857fd0_0       conda-forge
      cctools_osx-64:     973.0.1-h48a5a9d_13       conda-forge
      clang:              15.0.7-h694c41f_2         conda-forge
      clang-15:           15.0.7-default_hdb78580_2 conda-forge
      clang_osx-64:       15.0.7-h03d6864_3         conda-forge
      clangxx:            15.0.7-default_hdb78580_2 conda-forge
      clangxx_osx-64:     15.0.7-h2133e9c_3         conda-forge
      compiler-rt:        15.0.7-he1888fc_1         conda-forge
      compiler-rt_osx-64: 15.0.7-he1888fc_1         conda-forge
      icu:                72.1-h7336db1_0           conda-forge
      ld64_osx-64:        609-h8ce0179_13           conda-forge
      libclang-cpp15:     15.0.7-default_hdb78580_2 conda-forge
      libcxx:             16.0.4-hd57cbcb_0         conda-forge
      libiconv:           1.17-hac89ed1_0           conda-forge
      libllvm15:          15.0.7-he4b1e75_2         conda-forge
      libxml2:            2.11.4-hd95e348_0         conda-forge
      libzlib:            1.2.13-hfd90126_4         conda-forge
      llvm-tools:         15.0.7-he4b1e75_2         conda-forge
      make:               4.3-h22f3db7_1            conda-forge
      openssl:            3.1.0-h8a1eda9_3          conda-forge
      sigtool:            0.1.3-h88f4db0_0          conda-forge
      tapi:               1100.0.11-h9ce4665_0      conda-forge
      xz:                 5.2.6-h775f41a_0          conda-forge
      zstd:               1.5.2-hbc0c0cd_6          conda-forge

  Preparing transaction: ...working... done
  Verifying transaction: ...working... done
  Executing transaction: ...working... done
  Source cache directory is: /opt/mambaforge/envs/bioconda/conda-bld/src_cache
  INFO:conda_build.source:Source cache directory is: /opt/mambaforge/envs/bioconda/conda-bld/src_cache
  INFO:conda_build.source:Downloading source to cache: MBG_457d4540af.tar.gz
  INFO:conda_build.source:Downloading https://github.com/maickrau/MBG/files/10847732/MBG.tar.gz
  Downloading source to cache: MBG_457d4540af.tar.gz
  Downloading https://github.com/maickrau/MBG/files/10847732/MBG.tar.gz
  Success
  INFO:conda_build.source:Success
  Extracting download
  Applying patch: /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/mbg/version.patch
  Applying patch: /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/mbg/version.patch with args:
  ['-Np1', '-i', '/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/tmpaez38ful/version.patch.native', '--binary']
  checking file makefile
  Hunk #1 succeeded at 22 with fuzz 2 (offset 7 lines).
  patch unexpectedly ends in middle of line
  patch unexpectedly ends in middle of line
  patching file makefile
  Hunk #1 succeeded at 22 with fuzz 2 (offset 7 lines).
  patch unexpectedly ends in middle of line
  patch unexpectedly ends in middle of line
  Applying patch: /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/mbg/osx_availability.patch
  Applying patch: /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/mbg/osx_availability.patch with args:
  ['-Np1', '-i', '/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/tmpf8lus_a3/osx_availability.patch.native', '--binary']
  checking file makefile
  /opt/mambaforge/envs/bioconda/bin/patch: **** malformed patch at line 7:

  Warning: failed to download source.  If building, will try again after downloading recipe dependencies.
  Error was:
  Command '['/opt/mambaforge/envs/bioconda/bin/patch', '--no-backup-if-mismatch', '--batch', '-Np1', '-i', '/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/tmpf8lus_a3/osx_availability.patch.native', '--binary', '--dry-run']' returned non-zero exit status 2.
  Traceback (most recent call last):
    File "/opt/mambaforge/envs/bioconda/bin/conda-mambabuild", line 10, in <module>
      sys.exit(main())
    File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 256, in main
      call_conda_build(action, config)
    File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
      result = api.build(
    File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/api.py", line 180, in build
      return build_tree(
    File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/build.py", line 3078, in build_tree
      packages_from_this = build(metadata, stats,
    File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/build.py", line 2125, in build
      try_download(m, no_download_source=False, raise_error=True)
    File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/render.py", line 663, in try_download
      raise RuntimeError("Failed to download or patch source. Please see build log for info.")
  RuntimeError: Failed to download or patch source. Please see build log for info.
# Last 100 lines of the build log.
