# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /opt/recipe, last modified Tue Dec 31 09:07:00 2024
# ------------------------------------------------

package:
  name: bioconductor-tfbstools
  version: 1.44.0
source:
  md5: 6a911dc2eaa79f199041039488ed7271
  url:
    - https://bioarchive.galaxyproject.org/TFBSTools_1.44.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/Archive/TFBSTools/TFBSTools_1.44.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/TFBSTools_1.44.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-tfbstools/bioconductor-tfbstools_1.44.0_src_all.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-tfbstools >=1.44.0,<1.45.0a0
  string: r44h59b44dc_0
requirements:
  build:
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-aarch64 2.43 h4c662bb_2
    - binutils_linux-aarch64 2.43 hf1166c9_2
    - gcc_impl_linux-aarch64 13.3.0 hcdea9b6_1
    - gcc_linux-aarch64 13.3.0 h1cd514b_7
    - kernel-headers_linux-aarch64 4.18.0 h05a177a_18
    - ld_impl_linux-aarch64 2.43 h80caac9_2
    - libgcc 14.2.0 he277a41_1
    - libgcc-devel_linux-aarch64 13.3.0 h0c07274_101
    - libgomp 14.2.0 he277a41_1
    - libsanitizer 13.3.0 ha58e236_1
    - libstdcxx 14.2.0 h3f4de04_1
    - make 4.4.1 h2a6d0cb_2
    - sysroot_linux-aarch64 2.17 h68829e0_18
    - tzdata 2024b hc8b5060_0
  host:
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 3.5.2 pyhd8ed1ab_0
    - binutils_impl_linux-aarch64 2.43 h4c662bb_2
    - bioconductor-annotate 1.84.0 r44hdfd78af_0
    - bioconductor-annotationdbi 1.68.0 r44hdfd78af_0
    - bioconductor-biobase 2.66.0 r44h59b44dc_0
    - bioconductor-biocgenerics 0.52.0 r44hdfd78af_0
    - bioconductor-biocio 1.16.0 r44hdfd78af_0
    - bioconductor-biocparallel 1.40.0 r44h12ab77f_0
    - bioconductor-biostrings 2.74.0 r44h59b44dc_0
    - bioconductor-bsgenome 1.74.0 r44hdfd78af_0
    - bioconductor-cner 1.42.0 r44h8793571_0
    - bioconductor-data-packages 20241220 hdfd78af_0
    - bioconductor-delayedarray 0.32.0 r44h59b44dc_0
    - bioconductor-dirichletmultinomial 1.48.0 r44h02e93f8_0
    - bioconductor-genomeinfodb 1.42.0 r44hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.13 r44hdfd78af_0
    - bioconductor-genomicalignments 1.42.0 r44h59b44dc_0
    - bioconductor-genomicranges 1.58.0 r44h59b44dc_0
    - bioconductor-go.db 3.20.0 r44hdfd78af_0
    - bioconductor-iranges 2.40.0 r44h59b44dc_0
    - bioconductor-keggrest 1.46.0 r44hdfd78af_0
    - bioconductor-matrixgenerics 1.18.0 r44hdfd78af_0
    - bioconductor-pwalign 1.2.0 r44h59b44dc_0
    - bioconductor-rhtslib 3.2.0 r44h8793571_1
    - bioconductor-rsamtools 2.22.0 r44h6e81ef9_0
    - bioconductor-rtracklayer 1.66.0 r44h8793571_0
    - bioconductor-s4arrays 1.6.0 r44h59b44dc_0
    - bioconductor-s4vectors 0.44.0 r44h59b44dc_0
    - bioconductor-seqlogo 1.72.0 r44hdfd78af_0
    - bioconductor-sparsearray 1.6.0 r44h59b44dc_0
    - bioconductor-summarizedexperiment 1.36.0 r44hdfd78af_0
    - bioconductor-ucsc.utils 1.2.0 r44hdfd78af_0
    - bioconductor-xvector 0.46.0 r44h8793571_0
    - bioconductor-zlibbioc 1.52.0 r44h59b44dc_0
    - bwidget 1.10.1 h8af1aa0_0
    - bzip2 1.0.8 h68df207_7
    - c-ares 1.34.4 h86ecc28_0
    - ca-certificates 2024.12.14 hcefe29a_0
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    - font-ttf-ubuntu 0.83 h77eed37_3
    - fontconfig 2.15.0 h8dda3cd_1
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hf0a5ef3_2
    - fribidi 1.0.10 hb9de7d4_0
    - gcc_impl_linux-aarch64 14.2.0 hc4119dd_1
    - gfortran_impl_linux-aarch64 14.2.0 hddc744a_1
    - graphite2 1.3.13 h2f0025b_1003
    - gsl 2.7 h294027d_0
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    - harfbuzz 10.1.0 hbdc1db7_0
    - icu 75.1 hf9b3779_0
    - jq 1.7.1 h31becfc_0
    - kernel-headers_linux-aarch64 4.18.0 h05a177a_18
    - keyutils 1.6.1 h4e544f5_0
    - krb5 1.21.3 h50a48e9_0
    - ld_impl_linux-aarch64 2.43 h80caac9_2
    - lerc 4.0.0 h4de3ea5_0
    - libblas 3.9.0 8_hed5cd8a_netlib
    - libcblas 3.9.0 8_hed5cd8a_netlib
    - libcurl 8.11.1 h6702fde_0
    - libdeflate 1.23 h5e3c512_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h31becfc_2
    - libexpat 2.6.4 h5ad3122_0
    - libffi 3.4.2 h3557bc0_5
    - libgcc 14.2.0 he277a41_1
    - libgcc-devel_linux-aarch64 14.2.0 h46490cb_101
    - libgcc-ng 14.2.0 he9431aa_1
    - libgfortran 14.2.0 he9431aa_1
    - libgfortran-ng 14.2.0 he9431aa_1
    - libgfortran5 14.2.0 hb6113d0_1
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    - libgomp 14.2.0 he277a41_1
    - libiconv 1.17 h31becfc_2
    - libjpeg-turbo 3.0.0 h31becfc_1
    - liblapack 3.9.0 8_hed5cd8a_netlib
    - liblzma 5.6.3 h86ecc28_1
    - libmpdec 4.0.0 h68df207_0
    - libnghttp2 1.64.0 hc8609a4_0
    - libpng 1.6.44 hc4a20ef_0
    - libsanitizer 14.2.0 hff26f3d_1
    - libsqlite 3.47.2 h5eb1b54_0
    - libssh2 1.11.1 ha41c0db_0
    - libstdcxx 14.2.0 h3f4de04_1
    - libstdcxx-devel_linux-aarch64 14.2.0 h46490cb_101
    - libstdcxx-ng 14.2.0 hf1166c9_1
    - libtiff 4.7.0 h88f7998_3
    - libuuid 2.38.1 hb4cce97_0
    - libwebp-base 1.5.0 h0886dbf_0
    - libxcb 1.17.0 h262b8f6_0
    - libxml2 2.13.5 h2e0c361_1
    - libzlib 1.3.1 h86ecc28_2
    - make 4.4.1 h2a6d0cb_2
    - ncurses 6.5 hcccb83c_1
    - oniguruma 6.9.9 h31becfc_0
    - openssl 3.4.0 h86ecc28_0
    - pango 1.54.0 hd49db62_4
    - pcre2 10.44 h070dd5b_2
    - pip 24.3.1 pyh145f28c_2
    - pixman 0.44.2 h86a87f0_0
    - pthread-stubs 0.4 h86ecc28_1002
    - python 3.13.1 h3e021d1_102_cp313
    - python_abi 3.13 5_cp313
    - pyyaml 6.0.2 py313h31d5739_1
    - r-abind 1.4_5 r44hc72bb7e_1006
    - r-askpass 1.2.1 r44hdd76399_0
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    - r-base 4.4.2 h704e9fa_2
    - r-bh 1.87.0_1 r44hc72bb7e_0
    - r-bit 4.5.0.1 r44hdd76399_0
    - r-bit64 4.5.2 r44hdd76399_0
    - r-bitops 1.0_9 r44hdd76399_0
    - r-blob 1.2.4 r44hc72bb7e_2
    - r-cachem 1.1.0 r44hc1cf72c_1
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    - r-cli 3.6.3 r44h6170684_1
    - r-clipr 0.8.0 r44hc72bb7e_3
    - r-codetools 0.2_20 r44hc72bb7e_1
    - r-colorspace 2.1_1 r44hc1cf72c_0
    - r-cpp11 0.5.1 r44hc72bb7e_0
    - r-crayon 1.5.3 r44hc72bb7e_1
    - r-curl 6.0.1 r44h8829f0d_0
    - r-dbi 1.2.3 r44hc72bb7e_1
    - r-ellipsis 0.3.2 r44hc1cf72c_3
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    - r-futile.options 1.0.1 r44hc72bb7e_1005
    - r-ggplot2 3.5.1 r44hc72bb7e_1
    - r-glue 1.8.0 r44hdd76399_0
    - r-gtable 0.3.6 r44hc72bb7e_0
    - r-gtools 3.9.5 r44hc1cf72c_1
    - r-hms 1.1.3 r44hc72bb7e_2
    - r-httr 1.4.7 r44hc72bb7e_1
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    - r-mass 7.3_60.0.1 r44hc1cf72c_1
    - r-matrix 1.6_5 r44h4469540_1
    - r-matrixstats 1.4.1 r44hdd76399_0
    - r-memoise 2.0.1 r44hc72bb7e_3
    - r-mgcv 1.9_1 r44h4469540_1
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    - r-png 0.1_8 r44hb81c312_2
    - r-powerlaw 0.80.0 r44hc72bb7e_1
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    - r-prettyunits 1.2.0 r44hc72bb7e_1
    - r-progress 1.2.3 r44hc72bb7e_1
    - r-r.methodss3 1.8.2 r44hc72bb7e_3
    - r-r.oo 1.27.0 r44hc72bb7e_0
    - r-r.utils 2.12.3 r44hc72bb7e_1
    - r-r6 2.5.1 r44hc72bb7e_3
    - r-rcolorbrewer 1.1_3 r44h785f33e_3
    - r-rcpp 1.0.13_1 r44h21d2c02_0
    - r-rcurl 1.98_1.16 r44ha5cee84_1
    - r-readr 2.1.5 r44h6170684_1
    - r-reshape2 1.4.4 r44h6170684_4
    - r-restfulr 0.0.15 r44h475cc98_5
    - r-rjson 0.2.23 r44h9d76b47_0
    - r-rlang 1.1.4 r44h6170684_1
    - r-rsqlite 2.3.9 r44h21d2c02_0
    - r-scales 1.3.0 r44hc72bb7e_1
    - r-snow 0.4_4 r44hc72bb7e_3
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    - r-stringr 1.5.1 r44h785f33e_1
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    - r-tfmpvalue 0.0.9 r44h7d3bd7d_2
    - r-tibble 3.2.1 r44hc1cf72c_3
    - r-tidyselect 1.2.1 r44hc72bb7e_1
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    - r-utf8 1.2.4 r44hc1cf72c_1
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    - r-vroom 1.6.5 r44h6170684_1
    - r-withr 3.0.2 r44hc72bb7e_0
    - r-xml 3.99_0.17 r44hed34aec_2
    - r-xtable 1.8_4 r44hc72bb7e_6
    - r-yaml 2.3.10 r44hc1cf72c_0
    - readline 8.2 h8fc344f_1
    - sed 4.8 ha0d5d3d_0
    - setuptools 75.6.0 pyhff2d567_1
    - sysroot_linux-aarch64 2.17 h68829e0_18
    - tk 8.6.13 h194ca79_0
    - tktable 2.10 h52f7bd3_6
    - toml 0.10.2 pyhd8ed1ab_1
    - tomlkit 0.13.2 pyha770c72_1
    - tzdata 2024b hc8b5060_0
    - xmltodict 0.14.2 pyhd8ed1ab_1
    - xorg-libice 1.1.2 h86ecc28_0
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    - xorg-libxrender 0.9.12 h86ecc28_0
    - xorg-libxt 1.3.1 h57736b2_0
    - yaml 0.2.5 hf897c2e_2
    - yq 3.4.3 pyhd8ed1ab_1
    - zstd 1.5.6 h02f22dd_0
  run:
    - bioconductor-biobase >=2.66.0,<2.67.0
    - bioconductor-biobase >=2.66.0,<2.67.0a0
    - bioconductor-biocgenerics >=0.52.0,<0.53.0
    - bioconductor-biocgenerics >=0.52.0,<0.53.0a0
    - bioconductor-biocparallel >=1.40.0,<1.41.0
    - bioconductor-biocparallel >=1.40.0,<1.41.0a0
    - bioconductor-biostrings >=2.74.0,<2.75.0
    - bioconductor-biostrings >=2.74.0,<2.75.0a0
    - bioconductor-bsgenome >=1.74.0,<1.75.0
    - bioconductor-bsgenome >=1.74.0,<1.75.0a0
    - bioconductor-cner >=1.42.0,<1.43.0
    - bioconductor-cner >=1.42.0,<1.43.0a0
    - bioconductor-dirichletmultinomial >=1.48.0,<1.49.0
    - bioconductor-dirichletmultinomial >=1.48.0,<1.49.0a0
    - bioconductor-genomeinfodb >=1.42.0,<1.43.0
    - bioconductor-genomeinfodb >=1.42.0,<1.43.0a0
    - bioconductor-genomicranges >=1.58.0,<1.59.0
    - bioconductor-genomicranges >=1.58.0,<1.59.0a0
    - bioconductor-iranges >=2.40.0,<2.41.0
    - bioconductor-iranges >=2.40.0,<2.41.0a0
    - bioconductor-pwalign >=1.2.0,<1.3.0
    - bioconductor-pwalign >=1.2.0,<1.3.0a0
    - bioconductor-rtracklayer >=1.66.0,<1.67.0
    - bioconductor-rtracklayer >=1.66.0,<1.67.0a0
    - bioconductor-s4vectors >=0.44.0,<0.45.0
    - bioconductor-s4vectors >=0.44.0,<0.45.0a0
    - bioconductor-seqlogo >=1.72.0,<1.73.0
    - bioconductor-seqlogo >=1.72.0,<1.73.0a0
    - bioconductor-xvector >=0.46.0,<0.47.0
    - bioconductor-xvector >=0.46.0,<0.47.0a0
    - libblas >=3.9.0,<4.0a0
    - libgcc >=13
    - liblapack >=3.9.0,<4.0a0
    - r-base >=4.4,<4.5.0a0
    - r-base >=4.4,<4.5.0a0
    - r-catools >=1.17.1
    - r-dbi >=0.6
    - r-gtools >=3.5.0
    - r-rsqlite >=1.0.0
    - r-tfmpvalue >=0.0.5
    - r-xml >=3.98-1.3
test:
  commands:
    - $R -e "library('TFBSTools')"
about:
  description: TFBSTools is a package for the analysis and manipulation of transcription
    factor binding sites. It includes matrices conversion between Position Frequency
    Matirx (PFM), Position Weight Matirx (PWM) and Information Content Matrix (ICM).
    It can also scan putative TFBS from sequence/alignment, query JASPAR database
    and provides a wrapper of de novo motif discovery software.
  home: https://bioconductor.org/packages/3.20/bioc/html/TFBSTools.html
  license: GPL-2
  license_file: /opt/conda/conda-bld/bioconductor-tfbstools_1735636978072/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_/lib/R/share/licenses/GPL-2
  summary: Software Package for Transcription Factor Binding Site (TFBS) Analysis
extra:
  additional-platforms:
    - linux-aarch64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:tfbstools
