setup.py
src/columncostcomputer.cpp
src/columnindexingiterator.cpp
src/columnindexingscheme.cpp
src/columniterator.cpp
src/dptable.cpp
src/entry.cpp
src/graycodes.cpp
src/indexset.cpp
src/pedigree.cpp
src/pedigreecolumncostcomputer.cpp
src/pedigreedptable.cpp
src/pedigreepartitions.cpp
src/read.cpp
src/readset.cpp
whatshap/__init__.py
whatshap/__main__.py
whatshap/_variants.pyx
whatshap/align.pyx
whatshap/args.py
whatshap/bam.py
whatshap/compare.py
whatshap/core.pyx
whatshap/coverage.py
whatshap/example.py
whatshap/graph.py
whatshap/pedigree.py
whatshap/phase.py
whatshap/priorityqueue.pyx
whatshap/stats.py
whatshap/timer.py
whatshap/variants.py
whatshap/vcf.py
whatshap/verification.py
whatshap.egg-info/PKG-INFO
whatshap.egg-info/SOURCES.txt
whatshap.egg-info/dependency_links.txt
whatshap.egg-info/entry_points.txt
whatshap.egg-info/requires.txt
whatshap.egg-info/top_level.txt