# STOCKHOLM 1.0

#=GF AC   RF01293
#=GF ID   ACA59
#=GF DE   Small nucleolar RNA ACA59
#=GF AU   Wilkinson A
#=GF SE   Predicted; WAR; Wilkinson A
#=GF SS   Predicted; WAR; Wilkinson A
#=GF GA   43.00
#=GF TC   44.90
#=GF NC   40.30
#=GF TP   Gene; snRNA; snoRNA; HACA-box;
#=GF BM   cmbuild -F CM SEED
#=GF CB   cmcalibrate --mpi CM
#=GF SM   cmsearch --cpu 4 --verbose --nohmmonly -E 1000 -Z 549862.597050 CM SEQDB
#=GF DR   snoRNABase; ACA59;
#=GF DR   SO; 0001263; ncRNA_gene;
#=GF DR   GO; 0006396; RNA processing;
#=GF DR   GO; 0005730; nucleolus;
#=GF RN   [1]
#=GF RM   15199136
#=GF RT   Human box H/ACA pseudouridylation guide RNA machinery.
#=GF RA   Kiss AM, Jady BE, Bertrand E, Kiss T
#=GF RL   Mol Cell Biol. 2004;24:5797-5807.
#=GF WK   Small_nucleolar_RNA
#=GF SQ   3


AL031296.1/85969-86120     CUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUAACAAUACUUACUCUCGUUGGUGAUAAGGAACAGCU
AANU01225121.1/438-603     CUGCCUCACAACAUUUGUGCCUCAGUUACUCAUAGAUGUAGUGAGGGUGACAAUACUUACUCUCGUUGGUGAUAAGGAACAGCU
AAWR02037329.1/29294-29150 ---CUCGACACCACU---GCCUCGGUUACCCAUCGGUGCAGUGCGGGUAGUAGUACCAAUGCUAAUUAGUUGUGAGGACCAACU
#=GC SS_cons               -----((((,<<<<<<<<<___________>>>>>>>>>,,,,<<<<<<<______>>>>>>>,,,,,))))::::::::::::
#=GC RF                    CUGCcccaCAaCacuuguGCCUCaGUUACcCauagguGuAGUGaGgGuggcAaUACccaCcCucgUUgGuggUaAGGAaCAgCU
//
