duplex.h
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#ifndef __VIENNA_RNA_PACKAGE_DUPLEX_H__
#define __VIENNA_RNA_PACKAGE_DUPLEX_H__
#include "data_structures.h"
duplexT duplexfold( const char *s1,
const char *s2);
duplexT *duplex_subopt( const char *s1,
const char *s2,
int delta,
int w);
duplexT aliduplexfold(const char *s1[],
const char *s2[]);
duplexT *aliduplex_subopt(const char *s1[],
const char *s2[],
int delta,
int w);
#endif