part_func_up.h
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#ifndef __VIENNA_RNA_PACKAGE_PART_FUNC_UP_H__
#define __VIENNA_RNA_PACKAGE_PART_FUNC_UP_H__
#include "data_structures.h"
#define RNA_UP_MODE_1 1U
#define RNA_UP_MODE_2 2U
#define RNA_UP_MODE_3 4U
pu_contrib *pf_unstru(char *sequence,
int max_w);
interact *pf_interact(const char *s1,
const char *s2,
pu_contrib *p_c,
pu_contrib *p_c2,
int max_w,
char *cstruc,
int incr3,
int incr5);
void free_interact(interact *pin);
int Up_plot(pu_contrib *p_c,
pu_contrib *p_c_sh,
interact *pint,
char *ofile,
int **unpaired_values,
char *select_contrib,
char *head,
unsigned int mode);
pu_contrib *get_pu_contrib_struct( unsigned int n,
unsigned int w);
void free_pu_contrib_struct(pu_contrib *pu);
#endif