Utilities - Odds and Ends

### Table of Contents

- Producing secondary structure graphs
- Producing (colored) dot plots for base pair probabilities
- Producing (colored) alignments
- RNA sequence related utilities
- RNA secondary structure related utilities
- Miscellaneous Utilities

# Producing secondary structure graphs

    int PS_rna_plot ( char *string,
                      char *structure,
                      char *file)

Produce a secondary structure graph in PostScript and write it to 'filename'.