RNAlib-2.1.8

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dist_vars.h
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1 #ifndef __VIENNA_RNA_PACKAGE_DIST_VARS_H__
2 #define __VIENNA_RNA_PACKAGE_DIST_VARS_H__
3
15 extern int edit_backtrack;
16
21 extern char *aligned_line[4];
22
29 extern int cost_matrix;
30
31 /* Global type defs for Distance-Package */
32
33 typedef struct {
34 int type;
35 int weight;
36 int father;
37 int sons;
38 int leftmostleaf;
39 } Postorder_list;
40
41 typedef struct {
42 Postorder_list *postorder_list;
43 int *keyroots;
44 } Tree;
45
46 typedef struct {
47 int type;
48 int sign;
49 float weight;
50 } swString;
51 #endif