# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /opt/recipe, last modified Wed Mar  5 09:20:39 2025
# ------------------------------------------------

package:
  name: varlociraptor
  version: 8.7.1
source:
  sha256: 7460550a2806c67bcc7ecba66ec70862f9e0c92815ecf1319bda34810b0e989b
  url: https://github.com/varlociraptor/varlociraptor/archive/v8.7.1.tar.gz
build:
  number: '0'
  run_exports:
    - varlociraptor >=8.7.1,<9.0a0
  string: ha8ac579_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.43 h4bf12b8_4
    - binutils_linux-64 2.43 h4852527_4
    - bzip2 1.0.8 h4bc722e_7
    - c-ares 1.34.4 hb9d3cd8_0
    - ca-certificates 2025.1.31 hbcca054_0
    - cmake 3.31.6 h74e3db0_0
    - gcc_impl_linux-64 13.3.0 h1e990d8_2
    - gcc_linux-64 13.3.0 hc28eda2_8
    - gxx_impl_linux-64 13.3.0 hae580e1_2
    - gxx_linux-64 13.3.0 h6834431_8
    - kernel-headers_linux-64 3.10.0 he073ed8_18
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.3 h659f571_0
    - ld_impl_linux-64 2.43 h712a8e2_4
    - libcurl 8.12.1 h332b0f4_0
    - libedit 3.1.20250104 pl5321h7949ede_0
    - libev 4.33 hd590300_2
    - libexpat 2.6.4 h5888daf_0
    - libgcc 14.2.0 h767d61c_2
    - libgcc-devel_linux-64 13.3.0 hc03c837_102
    - libgcc-ng 14.2.0 h69a702a_2
    - libgomp 14.2.0 h767d61c_2
    - liblzma 5.6.4 hb9d3cd8_0
    - libnghttp2 1.64.0 h161d5f1_0
    - libsanitizer 13.3.0 he8ea267_2
    - libssh2 1.11.1 hf672d98_0
    - libstdcxx 14.2.0 h8f9b012_2
    - libstdcxx-devel_linux-64 13.3.0 hc03c837_102
    - libstdcxx-ng 14.2.0 h4852527_2
    - libuv 1.50.0 hb9d3cd8_0
    - libzlib 1.3.1 hb9d3cd8_2
    - make 4.4.1 hb9d3cd8_2
    - ncurses 6.5 h2d0b736_3
    - openssl 3.4.1 h7b32b05_0
    - pkg-config 0.29.2 h4bc722e_1009
    - rhash 1.4.5 hb9d3cd8_0
    - rust 1.84.0 h1a8d7c4_0
    - rust-std-x86_64-unknown-linux-gnu 1.84.0 h2c6d0dc_0
    - rust_linux-64 1.84.0 h94163a4_1
    - sysroot_linux-64 2.17 h0157908_18
    - tzdata 2025a h78e105d_0
    - zstd 1.5.7 hb8e6e7a_1
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_kmp_llvm
    - binutils_impl_linux-64 2.43 h4bf12b8_4
    - blis 0.9.0 h4ab18f5_2
    - bzip2 1.0.8 h4bc722e_7
    - ca-certificates 2025.1.31 hbcca054_0
    - clang 19.1.7 default_h9e3a008_1
    - clang-19 19.1.7 default_hb5137d0_1
    - clang-format 19.1.7 default_hb5137d0_1
    - clang-format-19 19.1.7 default_hb5137d0_1
    - clang-tools 19.1.7 default_hb5137d0_1
    - clangdev 19.1.7 default_hb5137d0_1
    - clangxx 19.1.7 default_ha78316a_1
    - gsl 2.7 he838d99_0
    - icu 75.1 he02047a_0
    - kernel-headers_linux-64 3.10.0 he073ed8_18
    - ld_impl_linux-64 2.43 h712a8e2_4
    - libblas 3.9.0 11_ha94c79b_netlib
    - libcblas 3.9.0 11_h71a1b9d_netlib
    - libclang 19.1.7 default_hb5137d0_1
    - libclang-cpp 19.1.7 default_hb5137d0_1
    - libclang-cpp19.1 19.1.7 default_hb5137d0_1
    - libclang13 19.1.7 default_h9c6a7e4_1
    - libgcc 14.2.0 h767d61c_2
    - libgcc-devel_linux-64 14.2.0 h9c4974d_102
    - libgcc-ng 14.2.0 h69a702a_2
    - libgfortran 14.2.0 h69a702a_2
    - libgfortran5 14.2.0 hf1ad2bd_2
    - libhwloc 2.11.2 default_h0d58e46_1001
    - libiconv 1.18 h4ce23a2_1
    - libllvm19 19.1.7 ha7bfdaf_1
    - liblzma 5.6.4 hb9d3cd8_0
    - liblzma-devel 5.6.4 hb9d3cd8_0
    - libstdcxx 14.2.0 h8f9b012_2
    - libstdcxx-devel_linux-64 14.2.0 h9c4974d_102
    - libstdcxx-ng 14.2.0 h4852527_2
    - libxml2 2.13.6 h8d12d68_0
    - libzlib 1.3.1 hb9d3cd8_2
    - llvm-openmp 19.1.7 h024ca30_0
    - llvm-tools 19.1.7 h84d6215_1
    - llvm-tools-19 19.1.7 h48f18f5_1
    - llvmdev 19.1.7 h48f18f5_1
    - mkl 2024.2.2 ha957f24_16
    - openssl 3.4.1 h7b32b05_0
    - sysroot_linux-64 2.17 h0157908_18
    - tbb 2021.13.0 hceb3a55_1
    - tzdata 2025a h78e105d_0
    - xz 5.6.4 hbcc6ac9_0
    - xz-gpl-tools 5.6.4 hbcc6ac9_0
    - xz-tools 5.6.4 hb9d3cd8_0
    - zlib 1.3.1 hb9d3cd8_2
    - zstd 1.5.7 hb8e6e7a_1
  run:
    - blis
    - bzip2 >=1.0.8,<2.0a0
    - gsl >=2.7,<2.8.0a0
    - libcblas >=3.9.0,<4.0a0
    - libgcc >=13
    - liblzma >=5.6.4,<6.0a0
    - libstdcxx >=13
    - libzlib >=1.3.1,<2.0a0
    - openssl >=3.4.1,<4.0a0
  run_constrained:
    - __glibc >=2.17
test:
  commands:
    - varlociraptor -h
about:
  dev_url: https://github.com/varlociraptor/varlociraptor
  doc_url: https://varlociraptor.github.io
  home: https://github.com/varlociraptor/varlociraptor
  license: GPL-3.0-or-later
  license_family: GPL3
  summary: Flexible, uncertainty-aware variant calling with parameter free filtration
    via FDR control.
extra:
  additional-platforms:
    - linux-aarch64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:varlociraptor
    - doi:10.1186/s13059-020-01993-6
