@HD	VN:1.6	SO:coordinate
@SQ	SN:z	LN:13
@CO	
@CO	Copyright (c) 2018 Genome Research Ltd.
@CO	
@CO	Permission is hereby granted, free of charge, to any person obtaining
@CO	a copy of this software and associated documentation files (the
@CO	"Software"), to deal in the Software without restriction, including
@CO	without limitation the rights to use, copy, modify, merge, publish,
@CO	distribute, sublicense, and/or sell copies of the Software, and to
@CO	permit persons to whom the Software is furnished to do so, subject
@CO	to the following conditions:
@CO	
@CO	The above copyright notice and this permission notice shall be included
@CO	in all copies or substantial portions of the Software.
@CO	
@CO	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
@CO	OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
@CO	MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
@CO	IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
@CO	CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
@CO	TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
@CO	SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
@CO	
@CO	               1
@CO	    123  4567890  123 Depadded base numbering
@CO	ref TAG  CTTAGCA  GGT
@CO	
@CO	s1   AG  CTTAG**TTGGC 7M 2D 2I 3M
@CO	s2   AG  CTTAG**TT    7M 2D 2I
@CO	s4   AG  CTTAG***T    7M 2D 1P 1I
@CO	s3   **AACTTAGCA  GG  2D 2I 9M
@CO	s5   ***ACTTAGCA  GG  2D 1P 1I 9M
@CO	     01AB2345678AB901
@CO	
s1	0	z	2	0	7M2D2I3M	*	0	0	AGCTTAGTTGGC	0123456AB901
s2	0	z	2	0	7M2D2I	*	0	0	AGCTTAGTT	0123456AB
s4	0	z	2	0	7M2D1P1I	*	0	0	AGCTTAGT	0123456B
s3	0	z	2	0	2D2I9M	*	0	0	AACTTAGCAGG	AB234567890
s5	0	z	2	0	2D1P1I9M	*	0	0	ACTTAGCAGG	B234567890
