U:RDoc::Attr[iI"
aqual:ETI"Bio::Scf#aqual;TI"RW;T:publico:RDoc::Markup::Document:@parts[o:RDoc::Markup::Paragraph;	[I"\The quality of each base at each position along the length of the sequence is captured ;TI"[by the nqual attributes where n is one of a, c, g or t. Generally the quality will be ;TI"`high for the base that is called at a particular position and low for all the other bases. ;TI"dHowever at positions of poor sequence quality, more than one base may have similar top scores. ;TI"_By analysing the nqual attributes it may be possible to determine if the base calling was ;TI"correct or not. ;TI"8The quality of the A base at each sequence position;T:
@fileI"*lib/bio/db/sanger_chromatogram/scf.rb;T:0@omit_headings_from_table_of_contents_below0F@I"
Bio::Scf;TcRDoc::NormalClass0