# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Dec 31 13:47:57 2022
# ------------------------------------------------

package:
  name: tgsgapcloser
  version: 1.2.1
source:
  sha256: bc2cde9397d6dc7776a204cb86e730a5d714d62c2ba60ae38a097cc9799286fe
  url: https://github.com/BGI-Qingdao/TGS-GapCloser/releases/download/v1.2.1/TGS-GapCloser-1.2.1_ml.zip
build:
  number: '0'
  string: h5b5514e_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.39 he00db2b_1
    - binutils_linux-64 2.39 h5fc0e48_11
    - gcc_impl_linux-64 10.4.0 h5231bdf_19
    - gcc_linux-64 10.4.0 h9215b83_11
    - gxx_impl_linux-64 10.4.0 h5231bdf_19
    - gxx_linux-64 10.4.0 h6e491c6_11
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.39 hcc3a1bd_1
    - libgcc-devel_linux-64 10.4.0 hd38fd1e_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libsanitizer 10.4.0 h5246dfb_19
    - libstdcxx-devel_linux-64 10.4.0 hd38fd1e_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - k8 0.2.5 hd03093a_2
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libzlib 1.2.13 h166bdaf_4
    - minimap2 2.24 h7132678_1
    - zlib 1.2.13 h166bdaf_4
  run:
    - libgcc-ng >=12
    - libstdcxx-ng >=12
    - libzlib >=1.2.13,<1.3.0a0
    - minimap2
    - zlib >=1.2.13,<1.3.0a0
test:
  commands:
    - tgsgapcloser
about:
  home: https://github.com/BGI-Qingdao/TGS-GapCloser
  license: GPL-3.0-only
  license_file: LICENSE
  summary: A gap-closing software tool that uses error-prone long reads generated
    by third-generation-sequence techniques (Pacbio, Oxford Nanopore, etc.) or preassembled
    contigs to fill N-gap in the genome assembly.
extra:
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - cchd0001
