[H] COG0001 Glutamate-1-semialdehyde aminotransferase
  Afu:  AF1241
  Hbs:  VNG2326G
  Mac:  MA0581
  Mth:  MTH228
  Mja:  MJ0603
  Mka:  MK0280
  Tac:  Ta0571
  Tvo:  TVN0635
  Pya:  PAE0594
  Sso:  SSO0182
  Ape:  APE2130 APE2299
  Spo:  SPCC417.11c
  Aae:  aq_816
  Fnu:  FN0540
  Dra:  DR0555
  Cac:  CAC0099
  Cgl:  Cgl0432
  Mtu:  Rv0524
  MtC:  MT0546
  Mle:  ML2414
  Sau:  SA1491 SA1681
  Lin:  lin1588 lin1793
  Bsu:  BS_gsaB BS_hemL
  Bha:  BH0943 BH2941 BH3043
  Syn:  sll0017
  Nos:  all2638 alr3265
  Eco:  hemL
  EcZ:  ZhemL
  Ecs:  ECs0158
  Ype:  YPO3389
  Sty:  STM0202
  Vch:  VC0626
  Pae:  PA3977 PA4088 PA5523
  Pmu:  PM0462
  Xfa:  XF2302
  Nme:  NMB1864
  NmA:  NMA0592
  Rso:  RSc0666 RSp0641_3
  Hpy:  HP0306
  jHp:  jhp0291
  Cje:  Cj0853c
  Atu:  AGl159 AGl2319 AGpA182
  Sme:  SMa0956
  Bme:  BMEII0192 BMEII0834
  Mlo:  mll5149
  Ccr:  CC3139
  Ctr:  CT210
  Cpn:  CPn0138
_______

[E] COG0002 Acetylglutamate semialdehyde dehydrogenase
  Afu:  AF2071
  Mac:  MA3566
  Mth:  MTH846
  Mja:  MJ1096
  Mka:  MK1077
  Pho:  PH1720
  Pab:  PAB0291
  Pya:  PAE2881
  Sso:  SSO0155
  Ape:  APE1462
  Sce:  YER069w_2
  Spo:  SPAC4G9.09c_3
  Aae:  aq_1879
  Tma:  TM1782
  Dra:  DR0078 DR0963
  Cac:  CAC2390
  Cgl:  Cgl1361
  Mtu:  Rv1652
  MtC:  MT1690
  Mle:  ML1406
  Lla:  L0104
  Sau:  SA0178
  Lin:  lin1633
  Bsu:  BS_argC
  Bha:  BH2900
  Syn:  sll0080
  Nos:  all2498 alr3537
  Eco:  argC
  EcZ:  ZargC
  Ecs:  ECs4887
  Ype:  YPO3927
  Sty:  STM4121
  Buc:  BU048
  Vch:  VC2644
  Pae:  PA0662
  Pmu:  PM1118
  Xfa:  XF1002
  Nme:  NMB1787
  NmA:  NMA0676
  Rso:  RSc0142
  Cje:  Cj0224
  Atu:  AGc2293
  Sme:  SMc01801
  Bme:  BMEI1171
  Mlo:  mll8452
  Ccr:  CC1378
_______

[P] COG0003 Oxyanion-translocating ATPase
  Hbs:  VNG0365G VNG7123
  Mth:  MTH1511
  Mja:  MJ1142
  Mka:  MK1680
  Tac:  Ta0437
  Tvo:  TVN0026 TVN1056
  Pab:  PAB1555
  Pya:  PAE1427
  Ape:  APE2164 APE2165
  Sce:  YDL100c
  Spo:  SPAC1142.06
  Aae:  aq_343 aq_682
  Fnu:  FN1537 FN1538
  Mtu:  Rv2184c Rv3679 Rv3680
  MtC:  MT2239 MT3781 MT3782
  Mle:  ML0890 ML2305 ML2306
  Lin:  pli0037
  Bha:  BH1795
  Syn:  sll0086 slr1794
  Nos:  all2244 all2700 all4481
_______

[P] COG0004 Ammonia permease
  Afu:  AF0977 AF1746 AF1749
  Mac:  MA3917 MA3918 MA4207
  Mth:  MTH661 MTH663
  Mja:  MJ0058 MJ1343
  Mka:  MK0053
  Tac:  Ta0181a Ta0181m
  Tvo:  TVN1042
  Sso:  SSO1054
  Sce:  YGR121c YNL142w YPR138c
  Spo:  SPAC2E1P3.02c SPAC664.14 SPCPB1C11.01
  Aae:  aq_112
  Tma:  TM0402
  Dra:  DR0693
  Cac:  CAC0682
  Cgl:  Cgl1545 Cgl2012
  Mtu:  Rv2920c
  MtC:  MT2988
  Lla:  L0236
  Sau:  SA1848
  Lin:  lin1551
  Bsu:  BS_nrgA
  Bha:  BH3834
  Syn:  sll0108 sll0537 sll1017
  Nos:  alr0990 alr0991 alr0992
  Eco:  amtB
  EcZ:  ZamtB
  Ecs:  ECs0505
  Ype:  YPO3142
  Sty:  STM0463
  Pae:  PA3039 PA5287
  Xfa:  XF1844
  Nme:  NMB0615
  NmA:  NMA0820
  Rso:  RSc0343
  Atu:  AGc5001
  Sme:  SMc03807
  Bme:  BMEI0167
  Mlo:  mll4246
  Ccr:  CC1338
  Uur:  UU218 UU219
_______

[F] COG0005 Purine nucleoside phosphorylase
  Afu:  AF1788
  Hbs:  VNG0335a VNG0335b
  Mac:  MA1409
  Mth:  MTH1596
  Mja:  MJ0060
  Mka:  MK0021
  Tac:  Ta0332
  Tvo:  TVN0438
  Pho:  PH0125 PH1143
  Pab:  PAB1659 PAB2264
  Pya:  PAE3338
  Sso:  SSO2343
  Ape:  APE1885
  Sce:  YLR017w YLR209c
  Spo:  SPAC16C9.02c SPAC1805.16c
  Aae:  aq_568
  Tma:  TM1596 TM1737
  Cac:  CAC2064
  Mtu:  Rv0535 Rv3307
  MtC:  MT0559 MT3406
  Mle:  ML0707
  Spy:  SPy0892
  Spn:  SP0831
  Lin:  lin2067
  Bsu:  BS_pnp
  Bha:  BH1531 BH1532
  Syn:  sll0135
  Nos:  alr4054
  Eco:  xapA
  Ype:  YPO1171
  Sty:  STM2422
  Pae:  PA3004
  Xfa:  XF2353
  Atu:  AGc210
  Sme:  SMc04123
  Mlo:  mlr3159 mlr7546
_______

[E] COG0006 Xaa-Pro aminopeptidase
  Afu:  AF2034
  Hbs:  VNG0723G VNG1233G
  Mac:  MA0213 MA4232
  Mth:  MTH981
  Mja:  MJ0806
  Mka:  MK0223
  Tac:  Ta0483 Ta1037
  Tvo:  TVN0558
  Pho:  PH0974 PH1149 PH1902
  Pab:  PAB1637 PAB1781 PAB2178
  Pya:  PAE0637 PAE2025
  Sso:  SSO0010 SSO0363
  Ape:  APE0526
  Sce:  YER078c YFR006w YLL029w
  Spo:  SPAC12B10.05 SPAC22G7.01c SPAPJ696.03c
  Ecu:  ECU04g0600
  Aae:  aq_1535
  Tma:  TM0042
  Fnu:  FN0453 FN1949
  Dra:  DR0478 DR1246
  Cac:  CAC2095 CAC2788
  Cgl:  Cgl1451 Cgl1582
  Mtu:  Rv2089c Rv2535c
  MtC:  MT2150 MT2610
  Mle:  ML0521
  Lla:  L90422 L96847
  Spy:  SPy0513 SPy1824
  Spn:  SP0187 SP1591
  Sau:  SA1360 SA1530
  Lin:  lin1391 lin1613
  Bsu:  BS_ykvY BS_yqhT
  Bha:  BH0491 BH1739 BH2800 BH3179
  Syn:  sll0136
  Nos:  all0266 alr1946
  Eco:  pepP pepQ ypdF
  EcZ:  Z3651 ZpepP ZpepQ
  Ecs:  ECs3265 ECs3779 ECs4775
  Ype:  YPO0910 YPO1950 YPO3765
  Sty:  STM3058 STM3984
  Vch:  VC0067
  Pae:  PA4498 PA5224
  Hin:  HI0816
  Pmu:  PM1724
  Xfa:  XF0220 XF2009
  Nme:  NMB1428
  NmA:  NMA1640
  Rso:  RSc0509
  Hpy:  HP1037
  jHp:  jhp0387
  Cje:  Cj0653c
  Atu:  AGc3749 AGc4027 AGl1483 AGl248 AGl3328 AGpA604 AGpA704
  Sme:  SMa1329 SMa1473 SMb20434 SMc01885 SMc02684
  Bme:  BMEI0485 BMEI0591 BMEI0924
  Mlo:  mll3393 mll4500 mll5970 mll6252 mlr1214 mlr1535 mlr2682
        mlr4446 mlr6027 mlr6218 mlr7141 mlr8570 mlr9012 mlr9203
        mlr9375
  Ccr:  CC1525
  Rpr:  RP482
  Rco:  RC0725
  Ctr:  CT574
  Cpn:  CPn0813
  Tpa:  TP0569
  Bbu:  BB0067
  Uur:  UU532
  Mpu:  MYPU_4880
  Mpn:  MPN470
  Mge:  MG324
_______

[H] COG0007 Uroporphyrinogen-III methylase
  Afu:  AF0422 AF1243
  Hbs:  VNG2331G
  Mac:  MA3033
  Mth:  MTH167
  Mja:  MJ0965
  Mka:  MK1548
  Tac:  Ta0653
  Tvo:  TVN0923
  Pya:  PAE0590 PAE2573 PAE3601
  Sso:  SSO2435 SSO2908
  Ape:  APE0236
  Sce:  YKR069w_2
  Spo:  SPCC1739.06c_2
  Aae:  aq_207
  Fnu:  FN0644_1
  Dra:  DRA0011_1
  Cac:  CAC0098_1
  Cgl:  Cgl0424_1 Cgl1952
  Mtu:  Rv0511_1 Rv2847c_2
  MtC:  MT0532_1 MT2913_2
  Mle:  ML2420_1
  Sau:  SA2186
  Lin:  lin1164_1
  Bsu:  BS_nasF_1 BS_ylnD
  Bha:  BH1495_1
  Syn:  sll0166_1 sll0378
  Nos:  alr0520 alr3450_1
  Eco:  cysG_2
  EcZ:  ZcysG_2
  Ecs:  ECs4219_2
  Ype:  YPO0158_2 YPO3367_2
  Sty:  STM3477_2
  Buc:  BU425_2
  Vch:  VC1363_2 VC2561
  Pae:  PA0510 PA1778 PA2611_2
  Xfa:  XF0832_2
  Nme:  NMB1156_2 NMB1194_2
  NmA:  NMA1367_2
  Rso:  RSc2420
  Atu:  AGc2683_2 AGc5071 AGl1897_2
  Sme:  SMb20987_2 SMc01053_2 SMc04284
  Bme:  BMEI0704 BMEI1768_2
  Mlo:  mll3232_2 mlr1386
  Ccr:  CC0024_2 CC0618 CC1118
_______

[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases
  Afu:  AF0260
  Hbs:  VNG1153G
  Mac:  MA0587
  Mth:  MTH51
  Mja:  MJ1377
  Mka:  MK0757
  Tac:  Ta0942
  Tvo:  TVN1086
  Pho:  PH1686
  Pab:  PAB0323
  Pya:  PAE2969
  Sso:  SSO0093
  Ape:  APE2317
  Sce:  YGL245w YOL033w YOR168w
  Spo:  SPAC17A5.15c SPAPB1A10.11c SPBC342.02
  Ecu:  ECU02g1210 ECU10g1460
  Aae:  aq_1221
  Tma:  TM1351 TM1875
  Fnu:  FN1340
  Dra:  DR0485 DR1687 DR2611_1
  Cac:  CAC0990
  Cgl:  Cgl0237 Cgl1263
  Mtu:  Rv2992c
  MtC:  MT3070
  Mle:  ML1688
  Lla:  L0349
  Spy:  SPy0239
  Spn:  SP2069
  Sau:  SA0486
  Lin:  lin0269
  Bsu:  BS_gltX
  Bha:  BH0109
  Syn:  sll0179
  Nos:  all3205
  Eco:  glnS gltX yadB
  EcZ:  ZglnS ZgltX ZyadB
  Ecs:  ECs0148 ECs0710 ECs3278
  Ype:  YPO2630 YPO2984 YPO3398
  Sty:  STM0185 STM0686 STM2415
  Buc:  BU070 BU415
  Vch:  VC0595 VC0997 VC2214
  Pae:  PA1794 PA3134 PA4724
  Hin:  HI0274 HI1354
  Pmu:  PM0528 PM1115
  Xfa:  XF0822 XF1338
  Nme:  NMB0003 NMB0349 NMB1560
  NmA:  NMA0250 NMA1748 NMA2138
  Rso:  RSc0791 RSc1179 RSc2210
  Hpy:  HP0476 HP0643
  jHp:  jhp0428 jhp0588
  Cje:  Cj0845c Cj1288c
  Atu:  AGl2475 AGl791
  Sme:  SMc00735 SMc03172
  Bme:  BMEI0381 BMEI0837 BMEI0968
  Mlo:  mll0813 mlr0628 mlr3479
  Ccr:  CC1905 CC2205
  Rpr:  RP325 RP623
  Rco:  RC0448 RC0966
  Ctr:  CT445
  Cpn:  CPn0560
  Tpa:  TP0673
  Bbu:  BB0372
  Uur:  UU599
  Mpu:  MYPU_6820
  Mpn:  MPN678
  Mge:  MG462
_______

[J] COG0009 Putative translation factor (SUA5)
  Afu:  AF0781
  Hbs:  VNG2312C
  Mac:  MA4554
  Mth:  MTH1692
  Mja:  MJ0062
  Mka:  MK0635
  Tac:  Ta0302
  Tvo:  TVN1298
  Pho:  PH0435
  Pab:  PAB1302
  Pya:  PAE2978
  Sso:  SSO0664
  Ape:  APE2397
  Sce:  YGL169w
  Spo:  SPCC895.03c
  Ecu:  ECU09g1610
  Aae:  aq_651
  Tma:  TM0852
  Fnu:  FN1993
  Dra:  DR1862
  Cac:  CAC2882
  Cgl:  Cgl1176
  Mtu:  Rv1301
  MtC:  MT1340
  Mle:  ML1136
  Lla:  L189883
  Spy:  SPy1143
  Spn:  SP1022
  Sau:  SA0838 SA1918
  Lin:  lin2685
  Bsu:  BS_ywlC
  Bha:  BH3771
  Syn:  sll0216 sll1866 slr0006
  Nos:  alr0116 alr0201
  Eco:  yciO yrdC
  EcZ:  ZyciO ZyrdC
  Ecs:  ECs1839 ECs4148
  Ype:  YPO0245a YPO2212
  Sty:  STM1720 STM3402
  Buc:  BU494
  Vch:  VC0054 VC1079 VC1178
  Pae:  PA0022 PA3199
  Hin:  HI0656 HI1198
  Pmu:  PM0662 PM1270
  Xfa:  XF0919
  Nme:  NMB0436 NMB2150
  NmA:  NMA0237 NMA2049
  Rso:  RSc0577 RSc1141
  Atu:  AGc1315
  Sme:  SMc00984
  Bme:  BMEI1528
  Mlo:  mlr7439
  Ccr:  CC3390
  Rpr:  RP848
  Rco:  RC1315
  Ctr:  CT137
  Cpn:  CPn0270
  Tpa:  TP0182
  Bbu:  BB0734 BBT06 BBU11
  Uur:  UU005m
  Mpu:  MYPU_6130
  Mpn:  MPN362_2
  Mge:  MG259_2
_______

[E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
  Afu:  AF0646
  Hbs:  VNG1209G VNG1767G
  Mac:  MA3986
  Mth:  MTH868
  Mja:  MJ0309
  Mka:  MK0738
  Tac:  Ta1058
  Tvo:  TVN0538
  Pho:  PH0083 PH0794
  Pab:  PAB0050 PAB1539
  Pya:  PAE2260
  Sso:  SSO0445 SSO2732
  Ape:  APE0316 APE1637
  Sce:  YPL111w
  Spo:  SPAC11D3.09 SPAC3H1.07 SPAPB24D3.03 SPBC8E4.03 SPBP26C9.02c
  Fnu:  FN0501_2 FN0662
  Dra:  DR0651 DRA0149
  Cac:  CAC1054
  Spy:  SPy2090
  Sau:  SA1968 SA2125
  Bsu:  BS_hutG BS_rocF BS_ywhG
  Bha:  BH0654 BH1985 BH2984 BH3810 BH3948
  Syn:  sll0228 sll1077
  Nos:  alr2310
  Eco:  speB
  EcZ:  ZspeB
  Ecs:  ECs3812
  Sty:  STM0788 STM3078
  Vch:  VC1204 VCA0814
  Pae:  PA0288 PA1421 PA3175
  Pmu:  PM1381
  Xfa:  XF1250
  Nme:  NMB0469
  NmA:  NMA2016
  Rso:  RSc0158 RSc2645 RSp1578
  Hpy:  HP1399
  jHp:  jhp1427
  Atu:  AGc2296 AGl1693 AGpT56
  Sme:  SMa1711 SMc01802 SMc01967 SMc03091
  Bme:  BMEI0110 BMEI1170 BMEII0396
  Mlo:  mll0412 mll6778 mll8453 mlr4895 mlr5015 mlr5700_2
_______

[S] COG0011 Uncharacterized conserved protein
  Afu:  AF0571
  Hbs:  VNG1877C
  Mth:  MTH1187
  Mja:  MJ1052
  Mka:  MK1019
  Tac:  Ta0847m
  Tvo:  TVN0940
  Pho:  PH1904
  Pab:  PAB1240
  Pya:  PAE1158
  Sce:  YBL001c
  Aae:  aq_2067
  Tma:  TM0486
  Cac:  CAC1398 CAC2786
  Cgl:  Cgl1190
  Mtu:  Rv1898
  MtC:  MT1949
  Spn:  SP2199
  Sau:  SA1133 SA1376
  Bsu:  BS_yqgV
  Bha:  BH1437_2 BH3874
  Syn:  sll0230
_______

[J] COG0012 Predicted GTPase, probable translation factor
  Afu:  AF1364
  Hbs:  VNG0504G VNG1749G
  Mac:  MA4401
  Mth:  MTH1515
  Mja:  MJ1332
  Mka:  MK0373
  Tac:  Ta0905
  Tvo:  TVN1009
  Pho:  PH0525
  Pab:  PAB1357
  Pya:  PAE3165
  Sso:  SSO0743
  Ape:  APE1164
  Sce:  YBR025c YGR210c YHL014c
  Spo:  SPAC27E2.03c SPACUNK4.13c SPBC428.15
  Ecu:  ECU06g1190
  Aae:  aq_609
  Tma:  TM1240
  Fnu:  FN1365
  Dra:  DR1386
  Cac:  CAC2134
  Cgl:  Cgl1003
  Mtu:  Rv1112
  MtC:  MT1143
  Mle:  ML1936
  Lla:  L0161
  Spy:  SPy0006
  Spn:  SP0004
  Sau:  SA0351
  Lin:  lin2919
  Bsu:  BS_yyaF
  Bha:  BH4051
  Syn:  sll0245
  Nos:  all0723
  Eco:  ychF
  EcZ:  ZychF
  Ecs:  ECs1708
  Ype:  YPO2010
  Sty:  STM1784
  Buc:  BU191
  Vch:  VC2185
  Pae:  PA4673
  Hin:  HI0393
  Pmu:  PM0163
  Xfa:  XF2641
  Nme:  NMB1838
  NmA:  NMA0618
  Rso:  RSc2898
  Hpy:  HP0569
  jHp:  jhp0516
  Cje:  Cj0930
  Atu:  AGc4063
  Sme:  SMc02695
  Bme:  BMEI0479
  Mlo:  mlr2695
  Ccr:  CC0479
  Rpr:  RP604
  Rco:  RC0928
  Ctr:  CT092
  Cpn:  CPn0321
  Tpa:  TP0124
  Bbu:  BB0235
  Uur:  UU595
  Mpu:  MYPU_1650
  Mpn:  MPN026
  Mge:  MG024
_______

[J] COG0013 Alanyl-tRNA synthetase
  Afu:  AF2255
  Hbs:  VNG2283G
  Mac:  MA0194
  Mth:  MTH1683
  Mja:  MJ0564
  Mka:  MK0900
  Tac:  Ta0849
  Tvo:  TVN0819
  Pho:  PH0297
  Pab:  PAB1245
  Pya:  PAE3565
  Sso:  SSO0341
  Ape:  APE2166
  Sce:  YOR335c
  Spo:  SPAC23C11.09
  Ecu:  ECU02g1490
  Aae:  aq_1293
  Tma:  TM1396
  Fnu:  FN0697
  Dra:  DR2300
  Cac:  CAC1678
  Cgl:  Cgl1594
  Mtu:  Rv2555c
  MtC:  MT2632
  Mle:  ML0512
  Lla:  L0343
  Spy:  SPy1389
  Spn:  SP1383
  Sau:  SA1446
  Lin:  lin1539
  Bsu:  BS_alaS
  Bha:  BH1267
  Syn:  sll0362
  Nos:  alr2418
  Eco:  alaS
  EcZ:  ZalaS
  Ecs:  ECs3554
  Ype:  YPO3305
  Sty:  STM2827
  Buc:  BU403
  Vch:  VC0545
  Pae:  PA0903
  Hin:  HI0814
  Pmu:  PM1287
  Xfa:  XF0124
  Nme:  NMB1595
  NmA:  NMA1788
  Rso:  RSc0797
  Hpy:  HP1241
  jHp:  jhp1162
  Cje:  Cj0506
  Atu:  AGc3437
  Sme:  SMc00475
  Bme:  BMEI0789
  Mlo:  mlr0032
  Ccr:  CC2529
  Rpr:  RP856
  Rco:  RC1327
  Ctr:  CT749
  Cpn:  CPn0892
  Tpa:  TP1017
  Bbu:  BB0220
  Uur:  UU369
  Mpu:  MYPU_5570
  Mpn:  MPN418
  Mge:  MG292
_______

[E] COG0014 Gamma-glutamyl phosphate reductase
  Mac:  MA4100
  Sce:  YOR323c
  Spo:  SPAC821.11
  Aae:  aq_1071
  Tma:  TM0293
  Dra:  DR1826
  Cac:  CAC3254
  Cgl:  Cgl2303
  Mtu:  Rv2427c
  MtC:  MT2500
  Mle:  ML1458
  Lla:  L0116
  Spy:  SPy1670
  Spn:  SP0932
  Lin:  lin1227
  Bsu:  BS_proA
  Bha:  BH1504
  Syn:  sll0373 sll0461
  Nos:  all2166 alr3995
  Eco:  proA
  EcZ:  ZproA
  Ecs:  ECs0270
  Ype:  YPO3221
  Sty:  STM0322
  Vch:  VC2273
  Pae:  PA4007
  Hin:  HI1239
  Pmu:  PM0936
  Xfa:  XF1005
  Nme:  NMB1068
  NmA:  NMA1267
  Rso:  RSc2741
  Cje:  Cj0558c
  Atu:  AGc5042
  Sme:  SMc03777
  Bme:  BMEI0208
  Mlo:  mll4009
  Ccr:  CC3430
  Tpa:  TP0350
_______

[F] COG0015 Adenylosuccinate lyase
  Afu:  AF2242
  Hbs:  VNG0415G
  Mac:  MA3971
  Mth:  MTH1537
  Mja:  MJ0929
  Mka:  MK1085
  Tac:  Ta0523
  Tvo:  TVN0999
  Pho:  PH0852
  Pab:  PAB0829
  Pya:  PAE0972
  Sso:  SSO0240
  Sce:  YLR359w
  Spo:  SPBC14F5.09c SPBC8E4.05c
  Aae:  aq_597
  Tma:  TM1095
  Fnu:  FN0368
  Dra:  DR2178
  Cac:  CAC1821
  Cgl:  Cgl1998 Cgl2345 Cgl2546
  Mtu:  Rv0777
  MtC:  MT0801
  Mle:  ML2230
  Lla:  L88187
  Spy:  SPy0036
  Spn:  SP0056
  Sau:  SA1724
  Lin:  lin1885
  Bsu:  BS_purB
  Bha:  BH0625
  Syn:  sll0421
  Nos:  alr3395
  Eco:  purB
  EcZ:  ZpurB
  Ecs:  ECs1603
  Ype:  YPO1636
  Sty:  STM1232
  Buc:  BU263
  Vch:  VC1126
  Pae:  PA0230 PA2629 PA3516 PA3517
  Hin:  HI0639
  Pmu:  PM1851
  Xfa:  XF1553
  Nme:  NMB0284
  NmA:  NMA2203
  Rso:  RSc2251 RSc2720
  Hpy:  HP1112
  jHp:  jhp1039
  Cje:  Cj0023 Cj1394
  Atu:  AGc3377 AGl661
  Sme:  SMb20575 SMc00508
  Bme:  BMEI1117 BMEII0634
  Mlo:  mll0079 mlr7211
  Ccr:  CC2410 CC2487
_______

[J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit
  Afu:  AF1955
  Hbs:  VNG2504G
  Mac:  MA0171
  Mth:  MTH742
  Mja:  MJ0487
  Mka:  MK0271
  Tac:  Ta0639
  Tvo:  TVN1037
  Pho:  PH0658
  Pab:  PAB2426
  Pya:  PAE1441
  Sso:  SSO0100
  Ape:  APE2302
  Sce:  YFL022c YPR047w_1
  Spo:  SPAC3G9.06 SPCC736.03c_1
  Ecu:  ECU07g1660
  Aae:  aq_953
  Tma:  TM0821
  Fnu:  FN2123
  Dra:  DR2354
  Cac:  CAC2357
  Cgl:  Cgl1356
  Mtu:  Rv1649
  MtC:  MT1687
  Mle:  ML1401
  Lla:  L0354
  Spy:  SPy0768
  Spn:  SP0579
  Sau:  SA0985
  Lin:  lin1184
  Bsu:  BS_pheS
  Bha:  BH3111
  Syn:  sll0454
  Nos:  all4845
  Eco:  pheS
  EcZ:  ZpheS
  Ecs:  ECs2421
  Ype:  YPO2429
  Sty:  STM1337
  Buc:  BU129
  Vch:  VC1219
  Pae:  PA2740
  Hin:  HI1311
  Pmu:  PM0631
  Xfa:  XF0741
  Nme:  NMB0724
  NmA:  NMA0933
  Rso:  RSc1581
  Hpy:  HP0403
  jHp:  jhp0978
  Cje:  Cj0897c
  Atu:  AGc443
  Sme:  SMc00365
  Bme:  BMEI2005
  Mlo:  mll5055
  Ccr:  CC1044
  Rpr:  RP417
  Rco:  RC0581
  Ctr:  CT836
  Cpn:  CPn0993
  Tpa:  TP0973
  Bbu:  BB0513
  Uur:  UU458
  Mpu:  MYPU_3480
  Mpn:  MPN105
  Mge:  MG194
_______

[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases
  Afu:  AF0920
  Hbs:  VNG0461G
  Mac:  MA1684
  Mth:  MTH226
  Mja:  MJ1555
  Mka:  MK0710
  Tac:  Ta0519 Ta0609m Ta0946
  Tvo:  TVN0659 TVN0996 TVN1090
  Pho:  PH0241 PH0270 PH1020
  Pab:  PAB0646 PAB2203 PAB2356
  Pya:  PAE0703 PAE2557 PAE2973
  Sso:  SSO0173
  Ape:  APE2192
  Sce:  YCR024c YHR019c YLL018c
  Spo:  SPBC1198.10c SPBC1773.10c SPCC1223.07c
  Ecu:  ECU06g0790 ECU09g1680
  Fnu:  FN0040
  Dra:  DR1055 DR1270
  Cac:  CAC2979 CAC3260 CAC3564
  Lla:  L0345
  Spy:  SPy0559 SPy0651
  Spn:  SP1542
  Sau:  SA1287
  Lin:  lin2010
  Bsu:  BS_asnS
  Bha:  BH1696
  Syn:  sll0495
  Nos:  alr3658
  Eco:  asnS
  EcZ:  ZasnS
  Ecs:  ECs1013
  Ype:  YPO1412
  Sty:  STM1000
  Buc:  BU360
  Vch:  VC1297
  Hin:  HI1302
  Pmu:  PM0643
  Xfa:  XF2563
  Tpa:  TP0609
  Bbu:  BB0101
  Uur:  UU365
  Mpu:  MYPU_7710
  Mpn:  MPN252
  Mge:  MG113
_______

[J] COG0018 Arginyl-tRNA synthetase
  Afu:  AF0894
  Hbs:  VNG6312G
  Mac:  MA0043
  Mth:  MTH1447
  Mja:  MJ0237
  Mka:  MK0758
  Tac:  Ta0281
  Tvo:  TVN1320
  Pho:  PH1478
  Pab:  PAB0469
  Pya:  PAE3343
  Sso:  SSO0857
  Ape:  APE1756
  Sce:  YDR341c YHR091c
  Spo:  SPBC25B2.09c
  Ecu:  ECU08g0550
  Aae:  aq_923
  Tma:  TM1093
  Fnu:  FN0506
  Dra:  DR2568
  Cac:  CAC1041
  Cgl:  Cgl1153
  Mtu:  Rv1292
  MtC:  MT1331
  Mle:  ML1127
  Lla:  L0344
  Spy:  SPy2151
  Spn:  SP2078
  Sau:  SA0564
  Lin:  lin2706
  Bsu:  BS_argS
  Bha:  BH0834 BH3808
  Syn:  sll0502
  Nos:  all3717
  Eco:  argS
  EcZ:  ZargS
  Ecs:  ECs2586
  Ype:  YPO2046
  Sty:  STM1909
  Buc:  BU242
  Vch:  VC2074
  Pae:  PA5051
  Hin:  HI1583
  Pmu:  PM0551
  Xfa:  XF0147
  Nme:  NMB1506
  NmA:  NMA1707
  Rso:  RSc0287
  Hpy:  HP0319
  jHp:  jhp0302
  Cje:  Cj1175c
  Atu:  AGc3144
  Sme:  SMc02073
  Bme:  BMEI1089
  Mlo:  mll1091
  Ccr:  CC3359
  Rpr:  RP065
  Rco:  RC0095
  Ctr:  CT454
  Cpn:  CPn0570
  Tpa:  TP0831
  Bbu:  BB0594
  Uur:  UU278
  Mpu:  MYPU_2430
  Mpn:  MPN556
  Mge:  MG378
_______

[E] COG0019 Diaminopimelate decarboxylase
  Afu:  AF0800
  Mac:  MA0726 MA2728
  Mth:  MTH1335
  Mja:  MJ1097
  Mka:  MK0483
  Tac:  Ta0788m
  Tvo:  TVN0806
  Sce:  YKL184w
  Spo:  SPAC144.04c
  Aae:  aq_1208 aq_728
  Tma:  TM1517 TM1873
  Dra:  DR1410 DR1758
  Cac:  CAC0608
  Cgl:  Cgl1154 Cgl2084_2
  Mtu:  Rv1293
  MtC:  MT1332
  Mle:  ML1128
  Lla:  L0121
  Spn:  SP0166 SP0920 SP1978
  Sau:  SA0119 SA1232
  Lin:  lin2066
  Bsu:  BS_lysA
  Bha:  BH1544 BH3958
  Syn:  sll0504 sll0873
  Nos:  all2997
  Eco:  lysA
  EcZ:  ZlysA
  Ecs:  ECs3695
  Ype:  YPO0796
  Sty:  STM2360 STM3013
  Buc:  BU438
  Vch:  VC0125 VC1623
  Pae:  PA4519 PA5277
  Hin:  HI0727
  Pmu:  PM0371 PM1424
  Xfa:  XF1116_2
  Nme:  NMB1976
  NmA:  NMA0468
  Rso:  RSc2979 RSp0424 RSp0679
  Hpy:  HP0020 HP0290
  jHp:  jhp0018 jhp0275
  Cje:  Cj0314 Cj1515c
  Atu:  AGc3079 AGl1366 AGl2454 AGl3227
  Sme:  SMb21631 SMc00723 SMc02983
  Bme:  BMEI0084 BMEI1589 BMEII1133
  Mlo:  mll1584 mll2974 mlr3508
  Ccr:  CC0360 CC2213
_______

[I] COG0020 Undecaprenyl pyrophosphate synthase
  Afu:  AF0707 AF1219
  Hbs:  VNG1779C VNG1781C
  Mac:  MA1831 MA3723 MA4402
  Mth:  MTH232
  Mja:  MJ1372
  Mka:  MK0767
  Tac:  Ta0546
  Tvo:  TVN0600
  Pho:  PH1590
  Pab:  PAB0394
  Pya:  PAE2942
  Sso:  SSO0163
  Ape:  APE1385
  Sce:  YBR002c YDL193w_2 YMR101c
  Spo:  SPAC4D7.04c SPBC2A9.06c
  Ecu:  ECU09g1870
  Aae:  aq_1248
  Tma:  TM1398
  Fnu:  FN1326
  Dra:  DR2447
  Cac:  CAC1432 CAC1791
  Cgl:  Cgl0966 Cgl2231
  Mtu:  Rv1086 Rv2361c
  MtC:  MT1118 MT1118.2 MT2430
  Mle:  ML0634 ML2467
  Lla:  L183602
  Spy:  SPy1965
  Spn:  SP0261
  Sau:  SA1103
  Lin:  lin1352
  Bsu:  BS_yluA
  Bha:  BH2423
  Syn:  sll0506
  Nos:  all2995 all3432
  Eco:  yaeS
  EcZ:  ZyaeS
  Ecs:  ECs0176
  Ype:  YPO1049
  Sty:  STM0221
  Buc:  BU236
  Vch:  VC2256
  Pae:  PA3652
  Hin:  HI0920
  Pmu:  PM1989
  Xfa:  XF1050
  Nme:  NMB0186
  NmA:  NMA0081
  Rso:  RSc1408
  Hpy:  HP1221
  jHp:  jhp1142
  Cje:  Cj0824
  Atu:  AGc2550
  Sme:  SMc02097
  Bme:  BMEI0827
  Mlo:  mll0640
  Ccr:  CC1919
  Rpr:  RP425
  Rco:  RC0590
  Ctr:  CT450
  Cpn:  CPn0566
  Tpa:  TP0603
  Bbu:  BB0120
_______

[G] COG0021 Transketolase
  Sce:  YBR117c YPR074c
  Spo:  SPBC2G5.05
  Ecu:  ECU06g0120
  Aae:  aq_1765
  Tma:  TM1762
  Dra:  DR2256
  Cac:  CAC0944 CAC1348
  Cgl:  Cgl1536
  Mtu:  Rv1449c
  MtC:  MT1496
  Mle:  ML0583
  Lla:  L0043
  Spy:  SPy1676
  Spn:  SP2030
  Sau:  SA1177
  Lin:  lin0360 lin1343 lin2809
  Bsu:  BS_tkt
  Bha:  BH2352
  Syn:  sll1070
  Nos:  all4052 alr3344
  Eco:  tktA tktB
  EcZ:  ZtktA ZtktB
  Ecs:  ECs3327 ECs3810
  Ype:  YPO0926
  Sty:  STM2474 STM3076
  Buc:  BU094
  Vch:  VC0473 VCA0624
  Pae:  PA0548
  Hin:  HI1023
  Pmu:  PM1242 PM1638
  Xfa:  XF1936
  Nme:  NMB1457
  NmA:  NMA1669
  Rso:  RSc2750
  Hpy:  HP1088
  jHp:  jhp0337
  Cje:  Cj1645
  Atu:  AGl2197
  Sme:  SMb20200 SMc02342 SMc03978
  Bme:  BMEI0311
  Mlo:  mlr3749
  Ccr:  CC3620
  Ctr:  CT750
  Cpn:  CPn0893
  Tpa:  TP0560
  Uur:  UU586
  Mpu:  MYPU_5110
  Mpn:  MPN082
  Mge:  MG066
_______

[C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
  Hbs:  VNG2218G
  Tac:  Ta1437
  Tvo:  TVN0101
  Pya:  PAE2646
  Sso:  SSO1370 SSO1526
  Ape:  APE1674
  Sce:  YBR221c
  Spo:  SPBC30D10.13c
  Ecu:  ECU04g1160
  Dra:  DR0030
  Mtu:  Rv2496c
  MtC:  MT2571
  Lla:  L0034
  Spy:  SPy1028
  Spn:  SP1163
  Sau:  SA0944 SA1347
  Lin:  lin1045 lin1410
  Bsu:  BS_acoB BS_bfmBAB BS_pdhB
  Bha:  BH0214 BH0777 BH1823 BH2654 BH2762
  Syn:  sll1721
  Nos:  all0122
  Pae:  PA2248 PA3416 PA4151
  Rso:  RSc1798
  Atu:  AGc2638_2 AGl2718
  Sme:  SMb20020_2 SMc01031_2 SMc03202
  Bme:  BMEI0855_2 BMEII0061_2 BMEII0216_2 BMEII0747
  Mlo:  mll3628 mll4472 mlr0384_2
  Ccr:  CC1727_2
  Rpr:  RP262
  Rco:  RC0348
  Ctr:  CT246 CT340_2
  Cpn:  CPn0033_2 CPn0305
  Mpu:  MYPU_7630
  Mpn:  MPN392
  Mge:  MG273
_______

[J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins
  Afu:  AF0914
  Hbs:  VNG2584C
  Mac:  MA4059
  Mth:  MTH10
  Mja:  MJ0463
  Mka:  MK0844
  Tac:  Ta1263b
  Tvo:  TVN0332
  Pho:  PH1771a
  Pab:  PAB7082
  Pya:  PAE3340
  Sso:  SSO5866
  Ape:  APE1629
  Sce:  YDR117c_2 YJR014w YNL244c
  Spo:  SPBC16C6.05 SPBC23G7.05
  Syn:  sll0546
  Nos:  alr3795
  Eco:  yciH
  EcZ:  ZyciH
  Ecs:  ECs1855
  Ype:  YPO2228
  Sty:  STM1706
  Vch:  VCA0570
  Pae:  PA4840
  Hin:  HI1225
  Pmu:  PM0796
_______

[J] COG0024 Methionine aminopeptidase
  Afu:  AF1840
  Hbs:  VNG1866G
  Mac:  MA0212
  Mth:  MTH1296
  Mja:  MJ1329
  Mka:  MK0613
  Tac:  Ta1439
  Tvo:  TVN0103
  Pho:  PH0628
  Pab:  PAB1434
  Pya:  PAE2116
  Sso:  SSO0098
  Ape:  APE1114
  Sce:  YBL091c YDR101c YLR244c
  Spo:  SPAC23H4.09 SPBC14C8.03 SPBC23E6.05 SPBC3E7.10
  Ecu:  ECU10g0750
  Aae:  aq_076
  Tma:  TM1478
  Fnu:  FN1297
  Dra:  DR1311
  Cgl:  Cgl0543 Cgl1961
  Mtu:  Rv0734 Rv2861c
  MtC:  MT0758 MT2929
  Mle:  ML1576 ML1831
  Lla:  L883
  Spy:  SPy1354
  Spn:  SP1084
  Sau:  SA1704
  Lin:  lin1821
  Bsu:  BS_map BS_yflG
  Bha:  BH0156
  Syn:  sll0555 slr0786 slr0918
  Nos:  all1019 alr4150
  Eco:  map
  EcZ:  Zmap
  Ecs:  ECs0170
  Ype:  YPO1043 YPO3337
  Sty:  STM0215
  Buc:  BU230
  Vch:  VC2261
  Pae:  PA2748 PA3657
  Hin:  HI1722
  Pmu:  PM0459
  Xfa:  XF0111
  Nme:  NMB2093
  NmA:  NMA0337
  Rso:  RSc1403
  Hpy:  HP1299
  jHp:  jhp1219
  Cje:  Cj1651c
  Atu:  AGc2957 AGc4195
  Sme:  SMb21002 SMc00298
  Bme:  BMEI0719
  Mlo:  mlr0954
  Ccr:  CC2677
  Rpr:  RP824
  Rco:  RC1276
  Ctr:  CT851
  Cpn:  CPn1009
  Tpa:  TP0842
  Bbu:  BB0105
  Uur:  UU252
  Mpu:  MYPU_5660
  Mpn:  MPN186
  Mge:  MG172
_______

[P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters
  Afu:  AF0846
  Hbs:  VNG2068C_1
  Mac:  MA2633 MA3020_1
  Mth:  MTH760
  Mja:  MJ0057 MJ1521
  Mka:  MK0552
  Tac:  Ta0900
  Tvo:  TVN1016
  Pab:  PAB1518
  Sce:  YDR456w YLR138w
  Spo:  SPAC15A10.06 SPAC3A11.09 SPAC977.10
  Ecu:  ECU04g1470
  Dra:  DR0652 DR2395 DRB0119
  Cgl:  Cgl1401
  Mtu:  Rv2287
  MtC:  MT2345
  Lla:  L187315
  Spn:  SP0655 SP0656
  Sau:  SA0585 SA2228
  Lin:  lin0795 lin2447
  Bsu:  BS_yvgP
  Syn:  sll0273 sll0556_1 slr1727
  Nos:  all2113 all4620 all4832 all5322 alr0252_1 alr2264_1
  Eco:  yjcE
  EcZ:  ZyjcE
  Ecs:  ECs5047
  Ype:  YPO3630
  Sty:  STM4269
  Vch:  VC0389 VC0689_1
  Pae:  PA2135 PA3660 PA3739_1 PA3887
  Pmu:  PM0365
  Xfa:  XF2019
  Atu:  AGl3497
  Mlo:  mll3064 mlr8398
_______

[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
  Hbs:  VNG0632G
  Tac:  Ta1107
  Tvo:  TVN0455
  Pya:  PAE0232
  Sso:  SSO1065
  Sce:  YOR128c_1
  Spo:  SPCC1322.13_1
  Aae:  aq_245
  Tma:  TM0447
  Dra:  DR0024
  Cgl:  Cgl0691
  Mtu:  Rv3276c
  MtC:  MT3376
  Mle:  ML0735
  Lla:  L151330
  Spy:  SPy0034
  Spn:  SP0054
  Sau:  SA0917
  Lin:  lin1886
  Bsu:  BS_purK
  Bha:  BH0624
  Syn:  sll0578
  Nos:  alr2742
  Eco:  purK
  EcZ:  ZpurK
  Ecs:  ECs0584
  Ype:  YPO3077
  Sty:  STM0533
  Vch:  VC0051
  Pae:  PA5425
  Hin:  HI1616
  Pmu:  PM0620
  Xfa:  XF2671
  Nme:  NMB1019
  NmA:  NMA1245
  Rso:  RSc0576
  Atu:  AGl2157
  Sme:  SMc04002
  Bme:  BMEI0295
  Mlo:  mlr3811
  Ccr:  CC3283
_______

[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
  Mja:  MJ1486
  Pho:  PH0318
  Pab:  PAB1268
  Sso:  SSO0026
  Cgl:  Cgl2702
  Mtu:  Rv0389
  MtC:  MT0401
  Bsu:  BS_purT
  Syn:  slr0861
  Nos:  alr1299
  Eco:  purT
  EcZ:  ZpurT
  Ecs:  ECs2559
  Ype:  YPO1775
  Sty:  STM1883
  Vch:  VC1228
  Pae:  PA3751
  Pmu:  PM1053
_______

[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
  Afu:  AF1720 AF1780 AF2015 AF2100
  Mac:  MA1354 MA1958 MA3298_2 MA3792
  Mth:  MTH1207 MTH1444 MTH1602 MTH476
  Mja:  MJ0256 MJ0277 MJ0663
  Mka:  MK0393 MK0448 MK0531 MK1236
  Tac:  Ta0500 Ta0691_1 Ta0780 Ta0816
  Tvo:  TVN0784 TVN1197
  Pab:  PAB0888
  Pya:  PAE3300
  Sso:  SSO0170 SSO0579 SSO1012 SSO1647 SSO2774 SSO2962 SSO3210
  Ape:  APE2509
  Sce:  YEL020c YMR108w
  Spo:  SPBC725.04 SPBP35G2.07
  Aae:  aq_451
  Tma:  TM0548
  Dra:  DR1516
  Cac:  CAC3169 CAC3652
  Cgl:  Cgl0097 Cgl1241 Cgl2559
  Mtu:  Rv0118c Rv1820 Rv3003c Rv3470c Rv3509c
  MtC:  MT0126 MT1868 MT3083 MT3576
  Mle:  ML0354 ML1696 ML2083
  Lla:  L0078 L0199 L210
  Spn:  SP0445 SP0730
  Sau:  SA1859 SA2008 SA2327
  Lin:  lin0730 lin2091 lin2114
  Bsu:  BS_alsS BS_ilvB BS_ydaP
  Bha:  BH3061 BH3873
  Syn:  sll1981 slr2088
  Nos:  all0427 all3555 all4613
  Eco:  ilvB ilvG ilvI poxB yfdU
  EcZ:  Z3637 ZilvB ZilvG ZilvI ZpoxB
  Ecs:  ECs0081 ECs0957 ECs3253 ECs4612 ECs4702
  Ype:  YPO0539 YPO1358 YPO2293 YPO3901
  Sty:  STM0116 STM0935 STM3796 STM3901
  Buc:  BU226
  Vch:  VC0031 VC1590 VC2483
  Pae:  PA1417 PA2035 PA2108 PA3506 PA4180 PA4696 PA4901
        PA4977 PA5297
  Hin:  HI0737 HI1585
  Pmu:  PM0870 PM1628
  Xfa:  XF1821
  Nme:  NMB1577
  NmA:  NMA1766
  Rso:  RSc1353 RSc2077
  Cje:  Cj0574
  Atu:  AGc3689 AGc3859 AGpA179
  Sme:  SMa0958 SMa2211 SMb20095 SMb21530 SMc01431 SMc02263 SMc04455
  Bme:  BMEI0617 BMEII0351
  Mlo:  mll1433 mll3567 mlr1615 mlr5207 mlr6648 mlr7164
  Ccr:  CC0393 CC2100
_______

[H] COG0029 Aspartate oxidase
  Hbs:  VNG1883G
  Pho:  PH0015
  Pab:  PAB2343
  Sso:  SSO0997
  Aae:  aq_777
  Fnu:  FN0009
  Cac:  CAC1024
  Mtu:  Rv1595
  MtC:  MT1631
  Mle:  ML1226
  Lin:  lin2131
  Bsu:  BS_nadB
  Bha:  BH1218
  Syn:  sll0631
  Nos:  alr1217
  Eco:  nadB
  EcZ:  ZnadB
  Ecs:  ECs3440
  Ype:  YPO2710
  Sty:  STM2641
  Vch:  VC2469
  Pae:  PA0761
  Xfa:  XF1924
  Nme:  NMB0392
  NmA:  NMA2092
  Rso:  RSc2447 RSp1263
  Atu:  AGl1513
  Sme:  SMc02599
  Mlo:  mll5834 mll9103
  Ccr:  CC2913
_______

[J] COG0030 Dimethyladenosine transferase (rRNA methylation)
  Afu:  AF1783
  Hbs:  VNG1165G
  Mac:  MA1441
  Mth:  MTH1326
  Mja:  MJ1029
  Mka:  MK0934
  Tac:  Ta1300m
  Tvo:  TVN0315
  Pho:  PH1823
  Pab:  PAB0253
  Pya:  PAE3221
  Sso:  SSO0749
  Ape:  APE0553
  Sce:  YPL266w
  Spo:  SPBC336.02
  Ecu:  ECU04g0460
  Aae:  aq_1816
  Tma:  TM1437
  Fnu:  FN0287
  Dra:  DR1526
  Cac:  CAC2986
  Cgl:  Cgl0886
  Mtu:  Rv1010 Rv1988
  MtC:  MT1039 MT2042
  Mle:  ML0241
  Lla:  L0363
  Spy:  SPy0262
  Spn:  SP1985
  Sau:  SA0048 SA0451 SA0766 SA1480 SA1951 SA2384
  Lin:  lin0227
  Bsu:  BS_ksgA
  Bha:  BH0057 BH0380
  Syn:  sll0708
  Nos:  alr3229
  Eco:  ksgA
  EcZ:  ZksgA
  Ecs:  ECs0056
  Ype:  YPO0492
  Sty:  STM0090
  Buc:  BU141
  Vch:  VC0443
  Pae:  PA0592
  Hin:  HI0549
  Pmu:  PM1209
  Xfa:  XF2148
  Nme:  NMB0066 NMB0697
  NmA:  NMA0902
  Rso:  RSc0518
  Hpy:  HP1431
  jHp:  jhp1322
  Cje:  Cj1711c
  Atu:  AGc2042
  Sme:  SMc00579
  Bme:  BMEI1267
  Mlo:  mll7860
  Ccr:  CC1685
  Rpr:  RP672
  Rco:  RC1022
  Ctr:  CT354
  Cpn:  CPn1059
  Tpa:  TP0337
  Bbu:  BB0590
  Uur:  UU601
  Mpu:  MYPU_0150
  Mpn:  MPN679
  Mge:  MG463
_______

[E] COG0031 Cysteine synthase
  Hbs:  VNG0606G VNG1301G
  Mac:  MA2720
  Tac:  Ta0535
  Tvo:  TVN0589
  Pab:  PAB0250
  Pya:  PAE1051
  Sso:  SSO0360
  Ape:  APE1223 APE1586
  Sce:  YGR012w YGR155w_1
  Spo:  SPAC3A12.17c SPBC36.04
  Aae:  aq_1556
  Tma:  TM0665
  Fnu:  FN1055 FN1220
  Dra:  DR0789
  Cac:  CAC0931 CAC2235
  Cgl:  Cgl2085 Cgl2508
  Mtu:  Rv0848 Rv1077_1 Rv1336 Rv2334 Rv3684
  MtC:  MT1108_1 MT1377 MT2397 MT3786
  Mle:  ML0839 ML2396_1
  Lla:  L0088 L0089
  Spy:  SPy1618
  Spn:  SP2210
  Sau:  SA0112 SA0418 SA0471
  Lin:  lin0255
  Bsu:  BS_cysK BS_yrhA BS_ytkP
  Bha:  BH0088 BH3271
  Syn:  sll0712 slr1842
  Nos:  all1169 all2521 alr4416 alr4552 alr7586
  Eco:  cysK cysM
  EcZ:  ZcysK ZcysM
  Ecs:  ECs3286 ECs3292
  Ype:  YPO2992 YPO3011 YPO3147 YPO4018
  Sty:  STM0458 STM2430 STM2440
  Buc:  BU066
  Vch:  VC0537 VC0968 VC1061
  Pae:  PA0399_1 PA0932 PA1061 PA2104 PA2709
  Hin:  HI1103
  Pmu:  PM1693
  Xfa:  XF0128 XF0603_1 XF0831
  Nme:  NMB0763
  NmA:  NMA0974
  Rso:  RSc0917 RSp0276 RSp0417
  Hpy:  HP0107
  jHp:  jhp0099
  Cje:  Cj0912c
  Atu:  AGc2247 AGc543
  Sme:  SMc00421 SMc01174
  Bme:  BMEI0101 BMEI0933
  Mlo:  mll4505_1 mll4616 mll9227 mlr0353 mlr4651 mlr9541
  Ccr:  CC1426 CC3625
_______

[G] COG0033 Phosphoglucomutase
  Sce:  YKL127w YMR105c
  Spo:  SPBC32F12.10
  Dra:  DR0303
  Cgl:  Cgl2489
  Mtu:  Rv3068c
  MtC:  MT3153
  Syn:  sll0726
  Eco:  pgm
  EcZ:  Zpgm
  Ecs:  ECs0719
  Ype:  YPO2686
  Sty:  STM0698
  Vch:  VC2095
  Atu:  AGl1564
  Sme:  SMc03925
  Bme:  BMEI1886
  Mlo:  mlr7590
  Ccr:  CC0085
_______

[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase
  Afu:  AF0873
  Hbs:  VNG1493G
  Mac:  MA3193
  Mth:  MTH646
  Mja:  MJ0204
  Mka:  MK1649
  Tac:  Ta1242
  Tvo:  TVN0354
  Pho:  PH0240
  Pab:  PAB0151
  Pya:  PAE0218 PAE0226
  Sso:  SSO0632 SSO0633
  Sce:  YMR300c
  Spo:  SPAC4D7.08c
  Aae:  aq_1175
  Tma:  TM1247
  Fnu:  FN0987
  Dra:  DR0220
  Cac:  CAC1392
  Cgl:  Cgl2530
  Mtu:  Rv0808
  MtC:  MT0829
  Mle:  ML2206
  Lla:  L171350
  Spy:  SPy0026
  Spn:  SP0046
  Sau:  SA0922
  Lin:  lin1880
  Bsu:  BS_purF
  Bha:  BH0630
  Syn:  sll0757
  Nos:  all3651
  Eco:  purF
  EcZ:  ZpurF
  Ecs:  ECs3196
  Ype:  YPO2772
  Sty:  STM2362
  Vch:  VC1004
  Pae:  PA3108
  Hin:  HI1207
  Pmu:  PM0701
  Xfa:  XF1949
  Nme:  NMB0690
  NmA:  NMA0892
  Rso:  RSc1976
  Cje:  Cj0196c
  Atu:  AGc1986
  Sme:  SMc00554
  Bme:  BMEI1488
  Mlo:  mll7833
  Ccr:  CC1658
_______

[F] COG0035 Uracil phosphoribosyltransferase
  Hbs:  VNG2305C
  Mth:  MTH1114
  Pab:  PAB1839
  Pya:  PAE1598
  Sso:  SSO0231
  Ape:  APE0545
  Sce:  YHR128w YNR012w_2
  Spo:  SPAC1002.17c SPAC1399.04c SPAC1B3.01c SPCC162.11c_2
  Aae:  aq_2163
  Tma:  TM0721
  Fnu:  FN0483
  Dra:  DR1563
  Cac:  CAC2879
  Cgl:  Cgl0664
  Mtu:  Rv3309c
  MtC:  MT3408
  Lla:  L175538
  Spy:  SPy0392
  Spn:  SP0745
  Sau:  SA1914
  Lin:  lin2682
  Bsu:  BS_upp
  Bha:  BH3764
  Syn:  sll1035
  Nos:  all2063
  Eco:  upp
  EcZ:  Zupp
  Ecs:  ECs3360
  Ype:  YPO2827
  Sty:  STM2498
  Vch:  VC2225
  Pae:  PA4646
  Hin:  HI1228
  Pmu:  PM0019
  Nme:  NMB0774
  NmA:  NMA0985
  Rso:  RSc2188
  Cje:  Cj1286c
  Atu:  AGc216
  Sme:  SMc04121
  Bme:  BMEII0232
  Mlo:  mll3162
  Ccr:  CC2268
  Tpa:  TP0448
  Uur:  UU116
  Mpu:  MYPU_3150
  Mpn:  MPN033
  Mge:  MG030
_______

[G] COG0036 Pentose-5-phosphate-3-epimerase
  Mja:  MJ0680
  Tac:  Ta1315
  Tvo:  TVN0264
  Sce:  YJL121c
  Spo:  SPAC31G5.05c
  Ecu:  ECU06g1040
  Aae:  aq_968
  Tma:  TM1718
  Fnu:  FN0680
  Dra:  DR1401_2
  Cac:  CAC1730
  Cgl:  Cgl1560
  Mtu:  Rv1408
  MtC:  MT1452
  Mle:  ML0554
  Lla:  L0047
  Spy:  SPy0264
  Spn:  SP1616 SP1983
  Sau:  SA1065
  Lin:  lin0499 lin0505 lin1932 lin2808 lin2810
  Bsu:  BS_yloR
  Bha:  BH2502
  Syn:  sll0807
  Nos:  alr0782
  Eco:  alsE rpe sgcE
  EcZ:  Zrpe
  Ecs:  ECs4228
  Ype:  YPO0155
  Sty:  STM1617 STM3483 STM4080
  Buc:  BU537
  Vch:  VC2625
  Pae:  PA0607
  Hin:  HI0566
  Pmu:  PM1280 PM1619
  Xfa:  XF0208
  Nme:  NMB1244
  NmA:  NMA1413
  Rso:  RSc2879
  Hpy:  HP1386
  jHp:  jhp1439
  Cje:  Cj0451
  Atu:  AGc3374
  Sme:  SMb20195 SMc00511
  Bme:  BMEI1116
  Mlo:  mlr4760 mlr7233
  Ccr:  CC0101
  Ctr:  CT121
  Cpn:  CPn0185
  Tpa:  TP0945
  Uur:  UU456
  Mpu:  MYPU_6830
  Mpn:  MPN251
  Mge:  MG112
_______

[D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
  Afu:  AF1321 AF1595
  Hbs:  VNG0190C
  Mac:  MA1029 MA1974 MA3614 MA3716
  Mth:  MTH1186 MTH1742
  Mja:  MJ0485 MJ1016 MJ1157 MJ1478 MJ1599
  Mka:  MK0051 MK0144 MK0756 MK1054 MK1103 MK1691 MK1692
  Tac:  Ta1119
  Tvo:  TVN0445
  Pho:  PH0300 PH1608 PH1680 PH1968
  Pab:  PAB1092 PAB1152 PAB1992 PAB2029
  Pya:  PAE2295 PAE3646
  Sso:  SSO0586
  Ape:  APE0537 APE1799 APE2086
  Sce:  YGL211w
  Spo:  SPAC12B10.08c SPBC2G5.03
  Ecu:  ECU03g1240
  Aae:  aq_1333 aq_1887
  Tma:  TM0197 TM0579
  Fnu:  FN0868 FN1679 FN1977
  Dra:  DR0480 DR1207_1
  Cac:  CAC3204
  Cgl:  Cgl2642
  Mtu:  Rv3625c
  MtC:  MT3727
  Mle:  ML0213
  Lla:  L1002
  Spy:  SPy0013
  Spn:  SP0011
  Sau:  SA0467
  Lin:  lin0251_1
  Bsu:  BS_yacA
  Bha:  BH0083
  Syn:  slr1278
  Nos:  all0932
  Eco:  mesJ ydaO
  EcZ:  ZmesJ ZydaO
  Ecs:  ECs0190 ECs1928
  Ype:  YPO1062 YPO2335
  Sty:  STM0236 STM1654
  Buc:  BU110
  Vch:  VC1432 VC2242
  Pae:  PA1192 PA3150 PA3638
  Hin:  HI0404 HI1371.1
  Pmu:  PM0289 PM0606
  Xfa:  XF0569 XF0659
  Nme:  NMB1023
  NmA:  NMA1350 NMA1465
  Rso:  RSc0175 RSc1170
  Hpy:  HP0728 HP1182
  jHp:  jhp0665 jhp1108
  Cje:  Cj0118 Cj1316c Cj1324 Cj1453c
  Atu:  AGc3410 AGl2252
  Sme:  SMc00534 SMc02940
  Bme:  BMEI0342 BMEI1132
  Mlo:  mll3884 mlr0047
  Ccr:  CC3227
  Rpr:  RP042
  Rco:  RC0067
  Ctr:  CT217 CT840
  Cpn:  CPn0261 CPn0997
  Tpa:  TP0373
  Bbu:  BB0788
  Uur:  UU077
  Mpu:  MYPU_7800
  Mpn:  MPN222
  Mge:  MG084
_______

[P] COG0038 Chloride channel protein EriC
  Afu:  AF1415_1
  Hbs:  VNG1544G_1
  Mac:  MA3609_1
  Mja:  MJ0305
  Mka:  MK0872
  Tac:  Ta1464_1
  Tvo:  TVN0094_1
  Pho:  PH0032
  Pab:  PAB2010
  Sso:  SSO3202_1
  Ape:  APE1552_1 APE1555
  Sce:  YJR040w_1
  Spo:  SPBC19C7.11_1 SPBC887.02
  Aae:  aq_438_1 aq_439
  Fnu:  FN1727
  Dra:  DR1752
  Cac:  CAC0442
  Cgl:  Cgl0063
  Mtu:  Rv0143c
  MtC:  MT0151
  Lla:  L105113 L113400
  Spy:  SPy0723 SPy1114 SPy1379
  Spn:  SP1157
  Bha:  BH0663
  Syn:  sll0855 sll1864_1 slr0617
  Nos:  alr2079_1 alr4891_1
  Eco:  yadQ yfeO ynfJ
  EcZ:  Z2583 Z3655 ZyadQ
  Ecs:  ECs0159 ECs2298 ECs3269
  Ype:  YPO2270 YPO3388
  Sty:  STM0203 STM1490 STM2404
  Vch:  VCA0526
  Hin:  HI0633
  Pmu:  PM1417
  Nme:  NMB0982 NMB2006
  NmA:  NMA0434 NMA1180 NMA1181
  Rso:  RSc1803 RSc2431_1 RSp0020
  Atu:  AGc1521 AGc2753_1
  Bme:  BMEI1445_1 BMEII0897
  Mlo:  mll1477_1 mll2953_1 mll4356
  Ccr:  CC2555_1
_______

[C] COG0039 Malate/lactate dehydrogenases
  Afu:  AF0855
  Hbs:  VNG2367G
  Mac:  MA0819
  Mth:  MTH188
  Mja:  MJ0490
  Mka:  MK1069
  Tac:  Ta0952
  Tvo:  TVN1097
  Pya:  PAE2370
  Sso:  SSO2585
  Ape:  APE0672
  Sce:  YDL078c YKL085w YOL126c
  Spo:  SPAC186.08c SPCC306.08c
  Aae:  aq_1665 aq_1782
  Tma:  TM1867
  Fnu:  FN1169
  Dra:  DR0325 DR2364
  Cac:  CAC0267 CAC3552
  Cgl:  Cgl2329 Cgl2848
  Mtu:  Rv1240
  MtC:  MT1278
  Mle:  ML1091
  Lla:  L0017 L0018 L142159
  Spy:  SPy1151
  Spn:  SP1220
  Sau:  SA0232 SA2395
  Lin:  lin0242 lin1049 lin1569 lin1775
  Bsu:  BS_citH BS_lctE
  Bha:  BH3158 BH3937
  Syn:  sll0891
  Nos:  alr4322
  Eco:  mdh
  EcZ:  Zmdh
  Ecs:  ECs4109
  Ype:  YPO3516
  Sty:  STM3359
  Vch:  VC0432
  Hin:  HI1210
  Pmu:  PM0550
  Xfa:  XF1211
  Rso:  RSc1998
  Cje:  Cj0532 Cj1167
  Atu:  AGc4782
  Sme:  SMc02479
  Bme:  BMEI0137
  Mlo:  mll4308
  Ccr:  CC3655
  Rpr:  RP376
  Rco:  RC0520
  Ctr:  CT376
  Cpn:  CPn1028
  Bbu:  BB0087
  Mpu:  MYPU_7590
  Mpn:  MPN674
  Mge:  MG460
_______

[E] COG0040 ATP phosphoribosyltransferase
  Afu:  AF0590
  Hbs:  VNG2247G
  Mac:  MA0217
  Mth:  MTH119 MTH1506
  Mja:  MJ1204
  Mka:  MK0365
  Pya:  PAE0961
  Sso:  SSO0593
  Sce:  YER055c
  Spo:  SPAC25G10.05c
  Aae:  aq_1613
  Tma:  TM1042
  Dra:  DR1445
  Cac:  CAC0936
  Cgl:  Cgl1468
  Mtu:  Rv2121c
  MtC:  MT2181
  Mle:  ML1310
  Lla:  L0066
  Sau:  SA2471
  Lin:  lin0577
  Bsu:  BS_hisG
  Bha:  BH3583
  Syn:  sll0900
  Nos:  alr1965
  Eco:  hisG
  EcZ:  ZhisG
  Ecs:  ECs2820
  Ype:  YPO1549
  Sty:  STM2071
  Buc:  BU099
  Vch:  VC1132
  Pae:  PA4449
  Hin:  HI0468
  Pmu:  PM1195
  Xfa:  XF2220
  Nme:  NMB1579
  NmA:  NMA1768
  Cje:  Cj1597
  Atu:  AGc1215
  Sme:  SMc00917
  Bme:  BMEII1054
  Mlo:  mlr6931
  Ccr:  CC3511
_______

[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
  Afu:  AF1271
  Hbs:  VNG0633G
  Mac:  MA1376
  Mth:  MTH1393
  Mja:  MJ0616
  Mka:  MK1195
  Tac:  Ta0303m
  Tvo:  TVN1297
  Pho:  PH0320
  Pab:  PAB1077
  Pya:  PAE0250
  Sso:  SSO1064
  Sce:  YOR128c_2
  Spo:  SPCC1322.13_2
  Aae:  aq_1178
  Tma:  TM0446
  Fnu:  FN0989
  Dra:  DR0023
  Cac:  CAC1390
  Cgl:  Cgl0694
  Mtu:  Rv3275c
  MtC:  MT3375
  Mle:  ML0736
  Lla:  L152487
  Spy:  SPy0033
  Spn:  SP0053
  Sau:  SA0916
  Lin:  lin1887
  Bsu:  BS_purE
  Bha:  BH0623
  Syn:  sll0901
  Nos:  alr0989
  Eco:  purE
  EcZ:  ZpurE
  Ecs:  ECs0585
  Ype:  YPO3076
  Sty:  STM0534
  Vch:  VC0052
  Pae:  PA5426
  Hin:  HI1615
  Pmu:  PM0619
  Xfa:  XF2672
  Nme:  NMB1439
  NmA:  NMA1651
  Rso:  RSc0575
  Cje:  Cj0702
  Atu:  AGl2159
  Sme:  SMc04001
  Bme:  BMEI0296
  Mlo:  mlr3809
  Ccr:  CC3284
_______

[J] COG0042 tRNA-dihydrouridine synthase
  Afu:  AF0746
  Hbs:  VNG1431C
  Mac:  MA0035 MA0693_1
  Mth:  MTH1016
  Mja:  MJ0144
  Mka:  MK0604
  Sce:  YLR401c_2 YLR405w YML080w YNR015w
  Spo:  SPAC16.04 SPBC1709.06 SPBC36B7.04 SPCC777.15
  Ecu:  ECU07g1170 ECU07g1610
  Aae:  aq_1598
  Tma:  TM0096
  Fnu:  FN0692
  Dra:  DR1698 DR2440
  Cac:  CAC3199 CAC3454
  Cgl:  Cgl2516
  Mtu:  Rv0823c
  MtC:  MT0845
  Mle:  ML2186
  Lla:  L19272
  Spy:  SPy0122
  Spn:  SP2189
  Sau:  SA0079 SA0085
  Lin:  lin0259
  Bsu:  BS_yacF BS_yfjN
  Bha:  BH0097
  Syn:  sll0926 slr0644
  Nos:  all1227 alr4898
  Eco:  yhdG yjbN yohI
  EcZ:  ZyhdG ZyjbN ZyohI
  Ecs:  ECs3026 ECs4132 ECs5031
  Ype:  YPO0316 YPO1175 YPO3655
  Sty:  STM2174 STM3384 STM4243
  Vch:  VC0291 VC0379 VC1105
  Pae:  PA2795 PA3129 PA4852
  Hin:  HI0270 HI0634 HI0979
  Pmu:  PM1087 PM1418 PM1880
  Xfa:  XF0387
  Nme:  NMB0348 NMB0999 NMB1421
  NmA:  NMA1207 NMA1633 NMA2139
  Rso:  RSc0506 RSc1299 RSc1635
  Hpy:  HP0727
  jHp:  jhp0664
  Cje:  Cj0123c
  Atu:  AGc2661 AGc2794
  Sme:  SMc01041 SMc04235
  Bme:  BMEI0864 BMEI1103
  Mlo:  mll0566 mlr0396
  Ccr:  CC1306 CC1739
  Rpr:  RP011
  Rco:  RC0011
  Ctr:  CT644
  Cpn:  CPn0768
  Tpa:  TP0980
  Bbu:  BB0225 BB0737
_______

[H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
  Afu:  AF0209 AF1643
  Mac:  MA0246
  Mth:  MTH1394
  Mja:  MJ1133
  Mka:  MK0234
  Tac:  Ta0184 Ta1199
  Tvo:  TVN0408
  Pho:  PH0963
  Pab:  PAB1798
  Pya:  PAE1844 PAE2232
  Sso:  SSO0879
  Ape:  APE1571 APE2078
  Sce:  YDR539w
  Aae:  aq_1612
  Dra:  DR0332
  Bsu:  BS_yclC
  Bha:  BH3930
  Syn:  sll0936
  Nos:  alr1108
  Eco:  ubiD
  EcZ:  Z4046 ZyigC
  Ecs:  ECs3592 ECs4771
  Ype:  YPO3769
  Sty:  STM2922 STM3978
  Vch:  VC0309
  Pae:  PA0254 PA5237
  Pmu:  PM0218
  Nme:  NMB1694
  NmA:  NMA1952
  Rso:  RSc0708
  Hpy:  HP0396
  jHp:  jhp0985
  Cje:  Cj0546
  Atu:  AGl941
  Sme:  SMa1288 SMa2217 SMb20136
  Bme:  BMEII0957
  Ccr:  CC0313
  Rpr:  RP821
  Rco:  RC1271
  Ctr:  CT085
  Cpn:  CPn0328
_______

[F] COG0044 Dihydroorotase and related cyclic amidohydrolases
  Afu:  AF2250
  Hbs:  VNG2533G
  Mac:  MA0892
  Mth:  MTH1127
  Mja:  MJ1490
  Mka:  MK0530
  Tac:  Ta1319
  Tvo:  TVN0269
  Pho:  PH1963
  Pab:  PAB1149
  Pya:  PAE0322
  Sso:  SSO0611
  Ape:  APE0261
  Sce:  YIR027c YJL130c_3
  Spo:  SPAC22G7.06c_3
  Aae:  aq_806
  Tma:  TM0335
  Fnu:  FN0420
  Dra:  DR1106 DR1153
  Cac:  CAC0519
  Cgl:  Cgl1573
  Mtu:  Rv1381
  MtC:  MT1425
  Mle:  ML0533
  Lla:  L81189
  Spy:  SPy0907
  Spn:  SP1167
  Sau:  SA1044
  Lin:  lin1951
  Bsu:  BS_pyrC BS_yunH
  Bha:  BH2309 BH2538
  Syn:  sll1018
  Nos:  all2303 alr3339 alr5010
  Eco:  ybbX ygeZ
  EcZ:  Z0666 Z0667 Z4212
  Ecs:  ECs0573 ECs0574 ECs3746
  Sty:  STM0523
  Pae:  PA0401 PA0441 PA5541
  Xfa:  XF0988
  Rso:  RSc0679
  Hpy:  HP0266
  jHp:  jhp0251
  Cje:  Cj1195c
  Atu:  AGc2404 AGc4328
  Sme:  SMa0552 SMc01361 SMc01821
  Bme:  BMEI1281 BMEI1644 BMEII0669
  Mlo:  mll1629 mlr0687 mlr7790
  Ccr:  CC0388 CC2444
_______

[C] COG0045 Succinyl-CoA synthetase, beta subunit
  Afu:  AF1540 AF2186
  Hbs:  VNG1541G
  Mth:  MTH1036
  Mja:  MJ0210
  Mka:  MK0731
  Tac:  Ta1332m
  Tvo:  TVN0274
  Pya:  PAE2312
  Sso:  SSO2483
  Ape:  APE1065
  Sce:  YGR244c
  Spo:  SPAC22A12.16 SPCC1620.08
  Aae:  aq_1306 aq_1620
  Dra:  DR1247
  Cgl:  Cgl2512
  Mtu:  Rv0951
  MtC:  MT0978
  Mle:  ML0155
  Sau:  SA1088
  Bsu:  BS_sucC
  Bha:  BH2470
  Syn:  sll1023
  Nos:  all3914
  Eco:  sucC
  EcZ:  ZsucC
  Ecs:  ECs0753
  Ype:  YPO1115
  Sty:  STM0738
  Vch:  VC2085
  Pae:  PA1588
  Hin:  HI1196
  Pmu:  PM0280
  Xfa:  XF2547
  Nme:  NMB0959
  NmA:  NMA1153
  Rso:  RSc0554
  Cje:  Cj0533
  Atu:  AGc4780
  Sme:  SMc02480
  Bme:  BMEI0138
  Mlo:  mll4306 mlr1324
  Ccr:  CC0337
  Rpr:  RP433
  Rco:  RC0599
  Ctr:  CT821
  Cpn:  CPn0973
_______

[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
  Afu:  AF1940
  Hbs:  VNG0864G
  Mac:  MA4055
  Mth:  MTH1374
  Mja:  MJ1264
  Mka:  MK0497
  Tac:  Ta1066
  Tvo:  TVN0521
  Pho:  PH1953
  Pab:  PAB1201
  Pya:  PAE0225
  Sso:  SSO0629
  Sce:  YGR061c_1
  Spo:  SPAC6F12.10c_1
  Aae:  aq_1836
  Tma:  TM1246
  Fnu:  FN0990_1
  Dra:  DR0222
  Cac:  CAC1655_1
  Cgl:  Cgl2534
  Mtu:  Rv0803
  MtC:  MT0823
  Mle:  ML2211
  Lla:  L173921
  Spy:  SPy0025_1
  Spn:  SP0045_1
  Sau:  SA0921
  Lin:  lin1881
  Bsu:  BS_purQ
  Bha:  BH0629
  Syn:  sll1056
  Nos:  all3652
  Eco:  purL_1
  EcZ:  ZpurL_1
  Ecs:  ECs3423_1
  Ype:  YPO2921_1
  Sty:  STM2565_1
  Vch:  VC0869_1
  Pae:  PA3763_1
  Hin:  HI0752_1
  Pmu:  PM1085_1
  Xfa:  XF1423_1
  Nme:  NMB1996_1
  NmA:  NMA0445_1
  Rso:  RSc1722_1
  Cje:  Cj0955c
  Atu:  AGc3393
  Sme:  SMc00488
  Bme:  BMEI1127
  Mlo:  mll0057
  Ccr:  CC2500
_______

[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
  Afu:  AF1260
  Hbs:  VNG1945G
  Mac:  MA1963
  Mth:  MTH168
  Mja:  MJ1648
  Mka:  MK0790
  Tac:  Ta1318m
  Tvo:  TVN0268
  Pho:  PH1955
  Pab:  PAB1200
  Pya:  PAE0222
  Sso:  SSO0628
  Sce:  YGR061c_2
  Spo:  SPAC6F12.10c_2
  Aae:  aq_1105
  Tma:  TM1245
  Fnu:  FN0990_2
  Dra:  DR0223
  Cac:  CAC1655_2
  Cgl:  Cgl2535
  Mtu:  Rv0788
  MtC:  MT0813
  Mle:  ML2219
  Lla:  L176360
  Spy:  SPy0025_2
  Spn:  SP0045_2
  Sau:  SA0920
  Lin:  lin1882
  Bsu:  BS_purL
  Bha:  BH0628
  Syn:  slr0520
  Nos:  alr2475
  Eco:  purL_2
  EcZ:  ZpurL_2
  Ecs:  ECs3423_2
  Ype:  YPO2921_2
  Sty:  STM2565_2
  Vch:  VC0869_2
  Pae:  PA3763_2
  Hin:  HI0752_2
  Pmu:  PM1085_2
  Xfa:  XF1423_2
  Nme:  NMB1996_2
  NmA:  NMA0445_2
  Rso:  RSc1722_2
  Cje:  Cj0514
  Atu:  AGc3385
  Sme:  SMc00493
  Bme:  BMEI1124
  Mlo:  mll0065
  Ccr:  CC2497
_______

[J] COG0048 Ribosomal protein S12
  Afu:  AF1892
  Hbs:  VNG2658G
  Mac:  MA1259
  Mth:  MTH1055
  Mja:  MJ1046
  Mka:  MK0681
  Tac:  Ta0091
  Tvo:  TVN0163
  Pho:  PH1542
  Pab:  PAB0427
  Pya:  PAE0670
  Sso:  SSO0219
  Ape:  APE1849
  Sce:  YGR118w YNR036c YPR132w
  Spo:  SPAC23C11.02c SPAC4F8.06 SPBP4H10.13
  Ecu:  ECU10g0400
  Aae:  aq_1834 aq_735
  Tma:  TM1505
  Fnu:  FN1558
  Dra:  DR0305
  Cac:  CAC3140
  Cgl:  Cgl0486
  Mtu:  Rv0682
  MtC:  MT0710
  Mle:  ML1880
  Lla:  L0389
  Spy:  SPy0271
  Spn:  SP0271
  Sau:  SA0503
  Lin:  lin2805
  Bsu:  BS_rpsL
  Bha:  BH0129
  Syn:  sll1096
  Nos:  all4340
  Eco:  rpsL
  EcZ:  ZrpsL
  Ecs:  ECs4193
  Ype:  YPO0200
  Sty:  STM3448
  Buc:  BU529
  Vch:  VC0359
  Pae:  PA4268
  Hin:  HI0581
  Pmu:  PM1354
  Xfa:  XF2631
  Nme:  NMB0136
  NmA:  NMA0137
  Rso:  RSc3024
  Hpy:  HP1197
  jHp:  jhp1120
  Cje:  Cj0491
  Atu:  AGc3561
  Sme:  SMc01314
  Bme:  BMEI0752
  Mlo:  mlr0283
  Ccr:  CC3202
  Rpr:  RP130
  Rco:  RC0172
  Ctr:  CT439m
  Cpn:  CPn0552
  Tpa:  TP0243
  Bbu:  BB0387
  Uur:  UU525
  Mpu:  MYPU_4300
  Mpn:  MPN225
  Mge:  MG087
_______

[J] COG0049 Ribosomal protein S7
  Afu:  AF1893
  Hbs:  VNG2657G
  Mac:  MA1258
  Mth:  MTH1056
  Mja:  MJ1047
  Mka:  MK0680
  Tac:  Ta0092
  Tvo:  TVN0162
  Pho:  PH1541
  Pab:  PAB0428
  Pya:  PAE0733
  Sso:  SSO0217
  Ape:  APE1846
  Sce:  YJR113c YJR123w
  Spo:  SPAC16E8.10c SPAC328.10c SPAC8C9.08
  Ecu:  ECU04g0140
  Aae:  aq_1832 aq_734
  Tma:  TM1504
  Fnu:  FN1557
  Dra:  DR0306
  Cac:  CAC3139
  Cgl:  Cgl0487
  Mtu:  Rv0683
  MtC:  MT0711
  Mle:  ML1879
  Lla:  L0384
  Spy:  SPy0272
  Spn:  SP0272
  Sau:  SA0504
  Lin:  lin2804
  Bsu:  BS_rpsG
  Bha:  BH0130
  Syn:  sll1097
  Nos:  all4339
  Eco:  rpsG
  EcZ:  ZrpsG
  Ecs:  ECs4192
  Ype:  YPO0201
  Sty:  STM3447
  Buc:  BU528
  Vch:  VC0360
  Pae:  PA4267
  Hin:  HI0580
  Pmu:  PM1355
  Xfa:  XF2630
  Nme:  NMB0137
  NmA:  NMA0136
  Rso:  RSc3023
  Hpy:  HP1196
  jHp:  jhp1119
  Cje:  Cj0492
  Atu:  AGc3559
  Sme:  SMc01313
  Bme:  BMEI0753
  Mlo:  mlr0284
  Ccr:  CC3201
  Rpr:  RP131
  Rco:  RC0173
  Ctr:  CT438
  Cpn:  CPn0551
  Tpa:  TP0244
  Bbu:  BB0386
  Uur:  UU524
  Mpu:  MYPU_4290
  Mpn:  MPN226
  Mge:  MG088
_______

[J] COG0050 GTPases - translation elongation factors
  Mka:  MK1404
  Sce:  YOR187w
  Spo:  SPBC9B6.04c
  Aae:  aq_005 aq_1928
  Tma:  TM1502
  Fnu:  FN1555
  Dra:  DR0309 DR2050
  Cac:  CAC3136
  Cgl:  Cgl0489
  Mtu:  Rv0685
  MtC:  MT0713
  Mle:  ML1877
  Lla:  L0371
  Spy:  SPy0611
  Spn:  SP1489
  Sau:  SA0506
  Lin:  lin2802
  Bsu:  BS_tufA
  Bha:  BH0132
  Syn:  sll1099
  Nos:  all4337
  Eco:  tufA tufB
  EcZ:  ZtufA ZtufB
  Ecs:  ECs4190 ECs4903
  Ype:  YPO0203 YPO3754
  Sty:  STM3445 STM4146
  Buc:  BU526
  Vch:  VC0321 VC0362
  Pae:  PA4265 PA4277
  Hin:  HI0578 HI0632
  Pmu:  PM1357 PM1746
  Xfa:  XF2628 XF2640
  Nme:  NMB0124 NMB0139
  NmA:  NMA0134 NMA0149
  Rso:  RSc3021 RSc3041
  Hpy:  HP1205
  jHp:  jhp1128
  Cje:  Cj0470
  Atu:  AGc3557 AGc3583
  Sme:  SMc01311 SMc01326
  Bme:  BMEI0742 BMEI0755
  Mlo:  mlr0263 mlr0288
  Ccr:  CC1240 CC3199
  Rpr:  RP661
  Rco:  RC1008
  Ctr:  CT322
  Cpn:  CPn0074
  Tpa:  TP0187
  Bbu:  BB0476
  Uur:  UU522
  Mpu:  MYPU_4050
  Mpn:  MPN665
  Mge:  MG451
_______

[J] COG0051 Ribosomal protein S10
  Afu:  AF0938
  Hbs:  VNG0433C VNG2648G
  Mac:  MA1255
  Mth:  MTH1059
  Mja:  MJ0322
  Mka:  MK0246
  Tac:  Ta0445
  Tvo:  TVN1050
  Pho:  PH1483
  Pab:  PAB0466
  Pya:  PAE2907
  Sso:  SSO0215
  Ape:  APE1842
  Sce:  YDR041w YHL015w
  Spo:  SPBC23E6.11 SPCC576.09
  Ecu:  ECU11g0720
  Aae:  aq_008
  Tma:  TM1501
  Fnu:  FN1646
  Dra:  DR0310
  Cac:  CAC3134
  Cgl:  Cgl0495
  Mtu:  Rv0700
  MtC:  MT0727
  Mle:  ML1864
  Lla:  L0387
  Spy:  SPy0047
  Spn:  SP0208
  Sau:  SA2048
  Lin:  lin2782
  Bsu:  BS_rpsJ
  Bha:  BH0133
  Syn:  sll1101
  Nos:  all4336
  Eco:  rpsJ
  EcZ:  ZrpsJ
  Ecs:  ECs4186
  Ype:  YPO0209
  Sty:  STM3441
  Buc:  BU525
  Vch:  VC2597
  Pae:  PA4264
  Hin:  HI0776
  Pmu:  PM1416
  Xfa:  XF1151
  Nme:  NMB0140
  NmA:  NMA0133
  Rso:  RSc3020
  Hpy:  HP1320
  jHp:  jhp1240
  Cje:  Cj1708c
  Sme:  SMc01310
  Bme:  BMEI0756
  Mlo:  mlr0289
  Ccr:  CC1247
  Rpr:  RP660
  Rco:  RC1007
  Ctr:  CT436
  Cpn:  CPn0549
  Tpa:  TP0188
  Bbu:  BB0477
  Uur:  UU230
  Mpu:  MYPU_5900
  Mpn:  MPN164
  Mge:  MG150
_______

[J] COG0052 Ribosomal protein S2
  Afu:  AF1133
  Hbs:  VNG1143G
  Mac:  MA0600
  Mth:  MTH44
  Mja:  MJ0982
  Mka:  MK1578
  Tac:  Ta1190
  Tvo:  TVN0399
  Pho:  PH1629
  Pab:  PAB0368
  Pya:  PAE0817
  Sso:  SSO0067
  Ape:  APE1750
  Sce:  YGR214w YHL004w_2 YLR048w
  Spo:  SPAC24C9.10c SPAPJ698.02c SPBC685.06
  Ecu:  ECU04g0450
  Aae:  aq_2007
  Tma:  TM0762
  Fnu:  FN1620
  Dra:  DR1513
  Cac:  CAC1787
  Cgl:  Cgl1979
  Mtu:  Rv2890c
  MtC:  MT2958
  Mle:  ML1598
  Lla:  L0379
  Spy:  SPy2092
  Spn:  SP2215
  Sau:  SA1099
  Lin:  lin1767
  Bsu:  BS_rpsB
  Bha:  BH2427
  Syn:  sll1260
  Nos:  all4792
  Eco:  rpsB
  EcZ:  ZrpsB
  Ecs:  ECs0171
  Ype:  YPO1044
  Sty:  STM0216
  Buc:  BU231
  Vch:  VC2260
  Pae:  PA3656
  Hin:  HI0913
  Pmu:  PM1984
  Xfa:  XF2580
  Nme:  NMB2101
  NmA:  NMA0328
  Rso:  RSc1404
  Hpy:  HP1554
  jHp:  jhp1445
  Cje:  Cj1182c
  Atu:  AGc2539
  Sme:  SMc02101
  Bme:  BMEI0823
  Mlo:  mll0651
  Ccr:  CC1923
  Rpr:  RP086
  Rco:  RC0112
  Ctr:  CT680
  Cpn:  CPn0696
  Tpa:  TP0606
  Bbu:  BB0123
  Uur:  UU026
  Mpu:  MYPU_5330
  Mpn:  MPN208
  Mge:  MG070
_______

[P] COG0053 Predicted Co/Zn/Cd cation transporters
  Afu:  AF2137 AF2388_1
  Hbs:  VNG1862G
  Mac:  MA0549 MA0617 MA0805 MA2085_1 MA3366 MA4005 MA4394
  Mth:  MTH1172_1 MTH1893
  Mja:  MJ0449
  Mka:  MK1570
  Pab:  PAB0462
  Pya:  PAE0568 PAE2261
  Sso:  SSO2228
  Ape:  APE1262
  Sce:  YMR177w YPL224c
  Spo:  SPCC1020.03
  Aae:  aq_2073
  Tma:  TM0876
  Fnu:  FN0948
  Dra:  DR1236
  Cac:  CAC0087 CAC0606 CAC1094
  Cgl:  Cgl2082 Cgl2724
  Mtu:  Rv2025c
  MtC:  MT2084
  Lla:  L106965 L67760
  Spy:  SPy1272
  Spn:  SP1552
  Sau:  SA2205
  Lin:  lin1805 lin2333 lin2517
  Bsu:  BS_ydbO BS_ydfM BS_yeaB
  Bha:  BH0712 BH1238
  Syn:  sll1263
  Nos:  all2900
  Eco:  yiiP
  EcZ:  ZyiiP
  Ecs:  ECs4840
  Ype:  YPO0077
  Sty:  STM4061
  Vch:  VC2690
  Pae:  PA3963
  Pmu:  PM0068
  Rso:  RSc3077
  Cje:  Cj0948c
  Atu:  AGc4131
  Sme:  SMc02724
  Bme:  BMEI0450
  Mlo:  mll4860 mlr2775
  Ccr:  CC3641
  Rpr:  RP832
  Rco:  RC1286
  Bbu:  BB0616
_______

[H] COG0054 Riboflavin synthase beta-chain
  Afu:  AF2128
  Hbs:  VNG0630G
  Mac:  MA1818
  Mth:  MTH1390
  Mja:  MJ0303
  Mka:  MK0281
  Pya:  PAE3296
  Sso:  SSO0400
  Ape:  APE1366
  Sce:  YOL143c
  Spo:  SPBC409.13
  Aae:  aq_132
  Tma:  TM1825
  Fnu:  FN1505
  Dra:  DR0156
  Cac:  CAC0593
  Cgl:  Cgl1556
  Mtu:  Rv1416
  MtC:  MT1459
  Mle:  ML0560
  Lla:  L0166
  Spn:  SP0175
  Sau:  SA1586
  Bsu:  BS_ribH
  Bha:  BH1557
  Syn:  sll1282
  Nos:  alr3993
  Eco:  ribH
  EcZ:  Z0516
  Ecs:  ECs0468
  Ype:  YPO3182
  Sty:  STM0417
  Buc:  BU459
  Vch:  VC2268
  Pae:  PA4053
  Hin:  HI1303
  Pmu:  PM0731
  Xfa:  XF0954
  Nme:  NMB0684
  NmA:  NMA0886
  Rso:  RSc0712
  Hpy:  HP0002
  jHp:  jhp0002
  Cje:  Cj0383c
  Atu:  AGc2165
  Sme:  SMc01609 SMc01777
  Bme:  BMEI1187 BMEII0589
  Mlo:  mll7281 mlr8409
  Ccr:  CC0888 CC1359
  Ctr:  CT732
  Cpn:  CPn0873
_______

[C] COG0055 F0F1-type ATP synthase, beta subunit
  Mac:  MA2441
  Sce:  YJR121w
  Spo:  SPAC222.12c
  Aae:  aq_2038
  Tma:  TM1610
  Fnu:  FN0358
  Cac:  CAC2865
  Cgl:  Cgl1185
  Mtu:  Rv1310
  MtC:  MT1350
  Mle:  ML1145
  Lla:  L6563
  Spy:  SPy0760
  Spn:  SP1508
  Sau:  SA1905
  Lin:  lin0138 lin2673
  Bsu:  BS_atpD
  Bha:  BH3754
  Syn:  slr1329
  Nos:  all5039
  Eco:  atpD
  EcZ:  ZatpD
  Ecs:  ECs4674
  Ype:  YPO4121
  Sty:  STM3865
  Buc:  BU008
  Vch:  VC2764
  Pae:  PA5554
  Hin:  HI0479
  Pmu:  PM1494
  Xfa:  XF1143
  Nme:  NMB1934
  NmA:  NMA0519
  Rso:  RSc3317
  Hpy:  HP1132
  jHp:  jhp1060
  Cje:  Cj0107
  Atu:  AGc4754
  Sme:  SMc02501
  Bme:  BMEI0251
  Mlo:  mll4060
  Ccr:  CC3447
  Rpr:  RP801
  Rco:  RC1235
  Uur:  UU054 UU129
  Mpu:  MYPU_2360 MYPU_2660 MYPU_4500 MYPU_6990
  Mpn:  MPN598
  Mge:  MG399
_______

[C] COG0056 F0F1-type ATP synthase, alpha subunit
  Mac:  MA2434
  Sce:  YBL099w
  Spo:  SPAC14C4.14
  Aae:  aq_679
  Tma:  TM1612
  Fnu:  FN0360
  Cac:  CAC2867
  Cgl:  Cgl1183
  Mtu:  Rv1308
  MtC:  MT1348
  Mle:  ML1143
  Lla:  L8990
  Spy:  SPy0758
  Spn:  SP1510
  Sau:  SA1907
  Lin:  lin0136 lin2675
  Bsu:  BS_atpA
  Bha:  BH3756
  Syn:  sll1326
  Nos:  all0005
  Eco:  atpA
  EcZ:  ZatpA
  Ecs:  ECs4676
  Ype:  YPO4123
  Sty:  STM3867
  Buc:  BU006
  Vch:  VC2766
  Pae:  PA5556
  Hin:  HI0481
  Pmu:  PM1492
  Xfa:  XF1145
  Nme:  NMB1936
  NmA:  NMA0517
  Rso:  RSc3319
  Hpy:  HP1134
  jHp:  jhp1062
  Cje:  Cj0105
  Atu:  AGc4757
  Sme:  SMc02499
  Bme:  BMEI0249
  Mlo:  mll4065
  Ccr:  CC3449
  Rpr:  RP803
  Rco:  RC1237
  Uur:  UU053 UU132_1
  Mpu:  MYPU_2350 MYPU_2680 MYPU_4490 MYPU_7000
  Mpn:  MPN600
  Mge:  MG401
_______

[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase
  Afu:  AF1732
  Hbs:  VNG0095G
  Mac:  MA1018 MA3345
  Mth:  MTH1009
  Mja:  MJ1146
  Mka:  MK0618
  Tac:  Ta1103
  Tvo:  TVN0458
  Pho:  PH1830
  Pab:  PAB0257
  Pya:  PAE1740
  Sso:  SSO0528
  Ape:  APE0171
  Sce:  YGR192c YJL052w YJR009c
  Spo:  SPBC32F12.11 SPBC354.12
  Ecu:  ECU07g0800
  Aae:  aq_1065
  Tma:  TM0688
  Fnu:  FN0652
  Dra:  DR1343
  Cac:  CAC0709
  Cgl:  Cgl0913 Cgl1550 Cgl2898
  Mtu:  Rv1436
  MtC:  MT1480
  Mle:  ML0570
  Lla:  L0004 L0005
  Spy:  SPy0274
  Spn:  SP2012
  Sau:  SA0727 SA1510
  Lin:  lin2553
  Bsu:  BS_gap BS_gapB
  Bha:  BH3149 BH3560
  Syn:  sll1342 slr0884
  Nos:  all2566 all5062 alr1095
  Eco:  epd gapA gapC
  EcZ:  Zepd ZgapA ZgapC
  Ecs:  ECs2022 ECs2488 ECs3798
  Ype:  YPO0922 YPO2157
  Sty:  STM1290 STM3070
  Buc:  BU298
  Vch:  VC0476 VC1069 VC2000 VCA0843
  Pae:  PA0551 PA3001 PA3195
  Hin:  HI0001
  Pmu:  PM0924
  Xfa:  XF0457
  Nme:  NMB0207 NMB2159
  NmA:  NMA0062 NMA0246
  Rso:  RSc2749
  Hpy:  HP0921 HP1346
  jHp:  jhp0855 jhp1265
  Cje:  Cj1403c
  Atu:  AGl2195
  Sme:  SMc03979
  Bme:  BMEI0310
  Mlo:  mlr3750
  Ccr:  CC3248
  Ctr:  CT505
  Cpn:  CPn0624
  Tpa:  TP0844
  Bbu:  BB0057
  Mpu:  MYPU_0460
  Mpn:  MPN430
  Mge:  MG301
_______

[G] COG0058 Glucan phosphorylase
  Mac:  MA1874
  Mja:  MJ1631
  Pho:  PH1512
  Pab:  PAB2414
  Pya:  PAE3422
  Sso:  SSO2538
  Sce:  YPR160w
  Aae:  aq_717
  Fnu:  FN0857
  Dra:  DR2195
  Cac:  CAC0857 CAC1664
  Cgl:  Cgl1277 Cgl2034
  Mtu:  Rv1328
  MtC:  MT1370
  Lla:  L99884
  Spy:  SPy1291
  Spn:  SP2106
  Bsu:  BS_glgP
  Bha:  BH1084
  Syn:  sll1356 slr1367
  Nos:  all1272 all2806
  Eco:  glgP malP
  EcZ:  ZglgP ZmalP
  Ecs:  ECs4259 ECs4273
  Ype:  YPO3938
  Sty:  STM3514 STM3534
  Vch:  VCA0013
  Pae:  PA2144
  Hin:  HI1361
  Pmu:  PM0545
  Atu:  AGl1556
  Sme:  SMc04460
  Mlo:  mlr7586
  Ctr:  CT248
  Cpn:  CPn0307
_______

[EH] COG0059 Ketol-acid reductoisomerase
  Afu:  AF1985
  Mac:  MA3790
  Mth:  MTH1442
  Mja:  MJ1543
  Mka:  MK0832
  Pab:  PAB0889
  Pya:  PAE3298
  Sso:  SSO0576 SSO1322 SSO1942
  Sce:  YLR355c
  Aae:  aq_1245
  Tma:  TM0550
  Dra:  DR1519
  Cac:  CAC0091
  Cgl:  Cgl1243
  Mtu:  Rv3001c
  MtC:  MT3081
  Mle:  ML1694
  Lla:  L0080
  Spn:  SP0447
  Sau:  SA1861
  Lin:  lin2093
  Bsu:  BS_ilvC
  Bha:  BH3059
  Syn:  sll1363
  Nos:  all2315
  Eco:  ilvC
  EcZ:  ZilvC
  Ecs:  ECs4708
  Ype:  YPO3888
  Sty:  STM3909
  Buc:  BU599
  Vch:  VC0162
  Pae:  PA4694
  Hin:  HI0682
  Pmu:  PM1284
  Xfa:  XF1822
  Nme:  NMB1574
  NmA:  NMA1763
  Rso:  RSc2075
  Hpy:  HP0330
  jHp:  jhp0313
  Cje:  Cj0632
  Atu:  AGc3660
  Sme:  SMc04346
  Bme:  BMEI0624
  Mlo:  mll1405
  Ccr:  CC2120
_______

[J] COG0060 Isoleucyl-tRNA synthetase
  Afu:  AF0633
  Hbs:  VNG2190G
  Mac:  MA2431
  Mth:  MTH1375
  Mja:  MJ0947
  Mka:  MK0899
  Tac:  Ta0879
  Tvo:  TVN0829
  Pho:  PH1065
  Pab:  PAB0616
  Pya:  PAE1617
  Sso:  SSO0722
  Ape:  APE0374
  Sce:  YBL076c YPL040c
  Spo:  SPBC8D2.06 SPBPI058 SPCC18B5.08c
  Ecu:  ECU11g1100
  Aae:  aq_305
  Tma:  TM1361
  Fnu:  FN0067
  Dra:  DR1335
  Cac:  CAC3038
  Cgl:  Cgl2098
  Mtu:  Rv1536
  MtC:  MT1587
  Mle:  ML1195
  Lla:  L0350
  Spy:  SPy1513
  Spn:  SP1659
  Sau:  SA1036
  Lin:  lin2127
  Bsu:  BS_ileS
  Bha:  BH2545
  Syn:  sll1362
  Nos:  alr1073
  Eco:  ileS
  EcZ:  ZileS
  Ecs:  ECs0029
  Ype:  YPO0475
  Sty:  STM0046
  Buc:  BU149
  Vch:  VC0682
  Pae:  PA4560
  Hin:  HI0962
  Pmu:  PM1662
  Xfa:  XF2418
  Nme:  NMB1833
  NmA:  NMA0622
  Rso:  RSc2458
  Hpy:  HP1422
  jHp:  jhp1317
  Cje:  Cj1061c
  Atu:  AGc1230
  Sme:  SMc00908
  Bme:  BMEII1043
  Mlo:  mlr8250
  Ccr:  CC0701
  Rpr:  RP617
  Rco:  RC0953
  Ctr:  CT019
  Cpn:  CPn0109
  Tpa:  TP0452
  Bbu:  BB0833
  Uur:  UU410
  Mpu:  MYPU_6670
  Mpn:  MPN520
  Mge:  MG345
_______

[G] COG0061 Predicted sugar kinase
  Afu:  AF2373
  Hbs:  VNG0576C VNG1900C
  Mac:  MA3343
  Mth:  MTH872
  Mja:  MJ0917_2
  Mka:  MK0742
  Tac:  Ta0622
  Tvo:  TVN1034
  Pho:  PH1074
  Pab:  PAB1756
  Pya:  PAE0624 PAE3116_1
  Sso:  SSO2219
  Ape:  APE1104
  Sce:  YEL041w YJR049c YPL188w
  Spo:  SPAC1B1.02c SPAC323.01c SPAC3H5.11 SPCC24B10.02c
  Ecu:  ECU07g1050
  Aae:  aq_909
  Tma:  TM1733
  Fnu:  FN0267
  Cac:  CAC2075
  Cgl:  Cgl1379
  Mtu:  Rv1695
  MtC:  MT1734
  Mle:  ML1359
  Lla:  L166614
  Spy:  SPy1126
  Spn:  SP1098
  Sau:  SA0865
  Lin:  lin0967 lin1628
  Bsu:  BS_yjbN BS_ytdI
  Bha:  BH2848 BH3199
  Syn:  sll1415 slr0400
  Nos:  all4751 alr0227
  Eco:  yfjB
  EcZ:  ZyfjB
  Ecs:  ECs3477
  Ype:  YPO1106
  Sty:  STM2683
  Buc:  BU185
  Vch:  VC0853
  Pae:  PA3088
  Hin:  HI0072
  Pmu:  PM0333
  Xfa:  XF2090
  Nme:  NMB0807
  NmA:  NMA1017
  Rso:  RSc2650
  Hpy:  HP1394
  jHp:  jhp1433
  Cje:  Cj0641
  Atu:  AGc2483
  Sme:  SMc01331
  Bme:  BMEI1036
  Mlo:  mll0225
  Ccr:  CC1221
  Rpr:  RP440
  Rco:  RC0612
  Tpa:  TP0441
  Bbu:  BB0311
  Uur:  UU177
  Mpn:  MPN267
  Mge:  MG128
_______

[S] COG0062 Uncharacterized conserved protein
  Afu:  AF0851_1
  Hbs:  VNG1272C_1
  Mac:  MA1170_1
  Mth:  MTH1256_1
  Mja:  MJ1586_1
  Mka:  MK0808_1
  Tac:  Ta1451_1
  Tvo:  TVN0127_1
  Pho:  PH1950_1
  Pab:  PAB1144_1
  Pya:  PAE2520_1
  Sso:  SSO2254_1
  Ape:  APE2362_1
  Sce:  YNL200c
  Spo:  SPAC15A10.05c
  Aae:  aq_1365_1
  Tma:  TM0922_1
  Dra:  DR1529_1
  Cac:  CAC0490_1
  Cgl:  Cgl0579_1
  Mtu:  Rv3433c_1
  MtC:  MT3539_1
  Mle:  ML0373_1
  Syn:  sll1433_1
  Nos:  alr2957_1
  Eco:  yjeF_1
  EcZ:  ZyjeF_1
  Ecs:  ECs5142_1
  Ype:  YPO0368_1
  Sty:  STM4356_1
  Vch:  VCA0191_1
  Pae:  PA4949_1
  Xfa:  XF0757_1
  Rso:  RSc1720_1
  Hpy:  HP1363_1
  jHp:  jhp1281_1
  Cje:  Cj0188c_1
  Atu:  AGc3249_1
  Sme:  SMc00946_1
  Bme:  BMEI0977_1
  Mlo:  mlr0346_1
  Ccr:  CC1965_1
_______

[G] COG0063 Predicted sugar kinase
  Afu:  AF0851_2
  Hbs:  VNG1272C_2
  Mac:  MA1170_2
  Mth:  MTH1256_2
  Mja:  MJ1337 MJ1586_2
  Mka:  MK0264 MK0808_2
  Tac:  Ta1451_2
  Tvo:  TVN0127_2
  Pho:  PH1950_2
  Pab:  PAB1144_2
  Pya:  PAE2520_2
  Sso:  SSO2254_2
  Ape:  APE2362_2
  Sce:  YKL151c
  Spo:  SPCC61.03
  Ecu:  ECU03g1390
  Aae:  aq_1365_2
  Tma:  TM0922_2
  Dra:  DR1529_2
  Cac:  CAC0490_2
  Cgl:  Cgl0579_2
  Mtu:  Rv3433c_2
  MtC:  MT3539_2
  Mle:  ML0373_2
  Lla:  L57608
  Sau:  SA0007
  Lin:  lin1663
  Bsu:  BS_yxkO
  Syn:  sll1433_2
  Nos:  alr2957_2
  Eco:  yjeF_2
  EcZ:  ZyjeF_2
  Ecs:  ECs5142_2
  Ype:  YPO0368_2
  Sty:  STM4356_2
  Vch:  VCA0191_2
  Pae:  PA4949_2
  Xfa:  XF0757_2
  Nme:  NMB1159 NMB1197
  NmA:  NMA1369
  Rso:  RSc1720_2
  Hpy:  HP1363_2
  jHp:  jhp1281_2
  Cje:  Cj0188c_2
  Atu:  AGc3249_2
  Sme:  SMc00946_2
  Bme:  BMEI0977_2
  Mlo:  mlr0346_2
  Ccr:  CC1965_2
_______

[J] COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)
  Afu:  AF2116
  Hbs:  VNG0345G
  Mac:  MA4524
  Mth:  MTH1280
  Mja:  MJ0160
  Mka:  MK0960
  Sso:  SSO0232
  Ape:  APE1718
  Sce:  YBL080c
  Spo:  SPAC343.13
  Aae:  aq_461
  Tma:  TM1273
  Fnu:  FN0753
  Dra:  DR2555 DR2611_2
  Cac:  CAC2669 CAC2976
  Cgl:  Cgl1230
  Mtu:  Rv3009c
  MtC:  MT3089
  Mle:  ML1700
  Lla:  L0474
  Spy:  SPy1770
  Spn:  SP0436
  Sau:  SA1715
  Lin:  lin1866
  Bsu:  BS_yerN
  Bha:  BH0667
  Syn:  sll1435
  Nos:  alr1396
  Pae:  PA4484
  Nme:  NMB1358
  NmA:  NMA1570
  Rso:  RSc0054
  Hpy:  HP0658
  jHp:  jhp0603
  Cje:  Cj1197c
  Atu:  AGc2438
  Sme:  SMc01350
  Bme:  BMEI1068
  Mlo:  mlr0190
  Ccr:  CC2436
  Rpr:  RP151
  Rco:  RC0193
  Ctr:  CT004
  Cpn:  CPn0004
  Tpa:  TP1021
  Bbu:  BB0341
  Uur:  UU544
  Mpu:  MYPU_2010
  Mpn:  MPN238
  Mge:  MG100
_______

[E] COG0065 3-isopropylmalate dehydratase large subunit
  Afu:  AF1963 AF2199
  Hbs:  VNG0014C
  Mac:  MA1393 MA3085
  Mth:  MTH1386 MTH1631
  Mja:  MJ0499 MJ1003
  Mka:  MK1208 MK1440
  Pho:  PH1726
  Pab:  PAB0287 PAB0891
  Pya:  PAE1984
  Sso:  SSO2471
  Sce:  YGL009c_1
  Spo:  SPAC9E9.03_1
  Aae:  aq_940
  Tma:  TM0291 TM0554
  Dra:  DR1610 DR1778
  Cac:  CAC3173
  Cgl:  Cgl1284
  Mtu:  Rv2988c
  MtC:  MT3066
  Mle:  ML1685
  Lla:  L0075
  Sau:  SA1864
  Lin:  lin2096
  Bsu:  BS_leuC
  Bha:  BH3056
  Syn:  sll1470
  Nos:  all1417
  Eco:  leuC
  EcZ:  ZleuC
  Ecs:  ECs0076
  Ype:  YPO0531
  Sty:  STM0111 STM0329
  Buc:  BUpL06
  Vch:  VC2492
  Pae:  PA3121
  Hin:  HI0988
  Pmu:  PM1960
  Xfa:  XF2375
  Nme:  NMB1036
  NmA:  NMA1450
  Rso:  RSc1990
  Cje:  Cj1717c
  Atu:  AGc4910
  Sme:  SMc03823
  Bme:  BMEI0157
  Mlo:  mll4272
  Ccr:  CC0196
_______

[E] COG0066 3-isopropylmalate dehydratase small subunit
  Afu:  AF0629 AF1761
  Mac:  MA0202 MA1223 MA3751
  Mth:  MTH1387 MTH829
  Mja:  MJ1271 MJ1277
  Mka:  MK0781 MK1206
  Pho:  PH1724
  Pab:  PAB0288 PAB0892
  Pya:  PAE1991
  Sso:  SSO2470
  Sce:  YGL009c_2
  Spo:  SPAC9E9.03_2
  Aae:  aq_1398
  Tma:  TM0292 TM0555
  Dra:  DR1614 DR1784
  Cac:  CAC3172
  Cgl:  Cgl1285
  Mtu:  Rv2987c
  MtC:  MT3065
  Mle:  ML1684
  Lla:  L0076
  Spn:  SP1255
  Sau:  SA1865
  Lin:  lin2097
  Bsu:  BS_leuD
  Bha:  BH3055
  Syn:  sll1444
  Nos:  all1416
  Eco:  leuD
  EcZ:  ZleuD
  Ecs:  ECs0075
  Ype:  YPO0530
  Sty:  STM0110 STM0330
  Buc:  BUpL07
  Vch:  VC2493
  Pae:  PA3120
  Hin:  HI0989
  Pmu:  PM1959
  Xfa:  XF2374
  Nme:  NMB1034
  NmA:  NMA1452
  Rso:  RSc1989
  Cje:  Cj1716c
  Atu:  AGc5065
  Sme:  SMc03795
  Bme:  BMEII0411
  Mlo:  mll4408
  Ccr:  CC0195
_______

[E] COG0067 Glutamate synthase domain 1
  Afu:  AF0952
  Mac:  MA4217
  Mth:  MTH191
  Mja:  MJ1351.1
  Mka:  MK1063
  Pya:  PAE3443_1
  Sso:  SSO0683_1
  Sce:  YDL171c_1
  Spo:  SPAPB1E7.07_1
  Aae:  aq_1565_1
  Tma:  TM0398
  Dra:  DR0183_1
  Cac:  CAC1673_1
  Cgl:  Cgl0184_1
  Mtu:  Rv3859c_1
  MtC:  MT3974_1
  Mle:  ML0061_1
  Lla:  L0119_1
  Sau:  SA0430_1
  Lin:  lin1845_1
  Bsu:  BS_gltA_1
  Bha:  BH1728_1
  Syn:  sll1499_1 sll1502_1
  Nos:  alr4344_1
  Eco:  gltB_1
  EcZ:  ZgltB_1
  Ecs:  ECs4091_1
  Ype:  YPO3557_1
  Sty:  STM3330_1
  Vch:  VC2373_1 VC2376_1
  Pae:  PA5036_1
  Xfa:  XF2710_1
  Rso:  RSc2965_1
  Cje:  Cj0007_1
  Atu:  AGc235_1 AGl1268 AGl2101_1
  Sme:  SMc02610 SMc04028_1
  Bme:  BMEII0040_1
  Mlo:  mll3030_1 mll7311
  Ccr:  CC3607_1
_______

[O] COG0068 Hydrogenase maturation factor
  Afu:  AF1366
  Mac:  MA0506 MA4161
  Mth:  MTH1287
  Mja:  MJ0713
  Mka:  MK0648
  Pho:  PH0897
  Pab:  PAB1560
  Aae:  aq_672
  Cac:  CAC0810 CAP0146
  Syn:  sll0322
  Nos:  alr0694
  Eco:  hypF
  EcZ:  ZhypF
  Ecs:  ECs3568
  Sty:  STM2842
  Hpy:  HP0048
  jHp:  jhp0041
  Cje:  Cj0622
_______

[E] COG0069 Glutamate synthase domain 2
  Afu:  AF0953_2
  Mac:  MA4218_2
  Mth:  MTH105_2 MTH1666 MTH194_2
  Mja:  MJ1351_2
  Mka:  MK0550
  Pya:  PAE3444
  Sso:  SSO0684
  Sce:  YDL171c_2
  Spo:  SPAPB1E7.07_2
  Aae:  aq_1565_2
  Tma:  TM0397_2 TM1058
  Dra:  DR0183_2
  Cac:  CAC1673_2
  Cgl:  Cgl0184_2
  Mtu:  Rv3859c_2
  MtC:  MT3974_2
  Mle:  ML0061_2
  Lla:  L0119_2
  Sau:  SA0430_2 SA2248
  Lin:  lin1845_2
  Bsu:  BS_gltA_2 BS_yerD
  Bha:  BH1728_2
  Syn:  sll1499_2 sll1502_2
  Nos:  alr4344_2
  Eco:  gltB_2
  EcZ:  ZgltB_2
  Ecs:  ECs4091_2
  Ype:  YPO3557_2
  Sty:  STM3330_2
  Vch:  VC2373_2 VC2376_2
  Pae:  PA3602 PA5036_2
  Xfa:  XF2710_2
  Rso:  RSc2722 RSc2965_2
  Cje:  Cj0007_2
  Atu:  AGc235_2 AGl1265 AGl2101_2
  Sme:  SMc02612 SMc04028_2
  Bme:  BMEII0040_2
  Mlo:  mll3030_2 mll7308
  Ccr:  CC3607_2
_______

[E] COG0070 Glutamate synthase domain 3
  Afu:  AF0954
  Mac:  MA4219
  Mth:  MTH106 MTH192
  Mja:  MJ1350
  Mka:  MK1064
  Pya:  PAE3443_2
  Sso:  SSO0683_2
  Sce:  YDL171c_3
  Spo:  SPAPB1E7.07_3
  Aae:  aq_1565_3
  Tma:  TM0394
  Dra:  DR0183_3
  Cac:  CAC1673_3
  Cgl:  Cgl0184_3
  Mtu:  Rv3859c_3
  MtC:  MT3974_3
  Mle:  ML0061_3
  Lla:  L0119_3
  Sau:  SA0430_3
  Lin:  lin1845_3
  Bsu:  BS_gltA_3
  Bha:  BH1728_3
  Syn:  sll1499_3 sll1502_3
  Nos:  alr4344_3
  Eco:  gltB_3
  EcZ:  ZgltB_3
  Ecs:  ECs4091_3
  Ype:  YPO3557_3
  Sty:  STM3330_3
  Vch:  VC2373_3 VC2376_3
  Pae:  PA5036_3
  Xfa:  XF2710_3
  Rso:  RSc2965_3
  Cje:  Cj0007_3
  Atu:  AGc235_3 AGl1266 AGl2101_3
  Sme:  SMc02611 SMc04028_3
  Bme:  BMEII0040_3
  Mlo:  mll3030_3 mll7310
  Ccr:  CC3607_3
_______

[O] COG0071 Molecular chaperone (small heat shock protein)
  Afu:  AF1296 AF1971
  Hbs:  VNG0097G VNG0283C VNG1771C VNG1801G VNG6201G
  Mac:  MA0133 MA3589 MA3594 MA4573 MA4574
  Mth:  MTH1366 MTH859
  Mja:  MJ0285
  Mka:  MK0002
  Tac:  Ta0471 Ta0864
  Tvo:  TVN0775 TVN0984
  Pho:  PH1842
  Pab:  PAB2072
  Pya:  PAE2270 PAE3117 PAE3172
  Sso:  SSO2427 SSO2603
  Ape:  APE0103 APE1950
  Sce:  YBR072w YDR171w_2
  Spo:  SPBC3E7.02c SPCC338.06c
  Aae:  aq_1283
  Tma:  TM0374
  Dra:  DR1114 DR1691
  Cac:  CAC3714
  Mtu:  Rv0251c Rv2031c
  MtC:  MT0265 MT2090
  Mle:  ML1795
  Sau:  SA2175
  Bsu:  BS_cotM BS_ydfT BS_yocM
  Bha:  BH0480 BH2272
  Syn:  sll1514
  Nos:  alr0286 alr1809
  Eco:  ibpA ibpB
  EcZ:  ZibpA ZibpB
  Ecs:  ECs4626 ECs4627
  Ype:  YPO4084 YPO4085
  Sty:  STM1251 STM3808 STM3809
  Buc:  BU580
  Vch:  VC0018
  Pae:  PA3126
  Xfa:  XF2234
  Rso:  RSc0200
  Atu:  AGc657 AGl1921 AGpA660 AGpA69
  Sme:  SMa1118 SMb21294 SMb21295 SMc01106 SMc04040
  Bme:  BMEI1784 BMEII0042
  Mlo:  mll2257 mll2386 mll2387 mll3033 mll9627 mlr3192 mlr4720
        mlr4721
  Ccr:  CC2258 CC3592
  Rpr:  RP273
  Rco:  RC0363
_______

[J] COG0072 Phenylalanyl-tRNA synthetase beta subunit
  Afu:  AF1424
  Hbs:  VNG2505G
  Mac:  MA1956
  Mth:  MTH770
  Mja:  MJ1108
  Mka:  MK0820
  Tac:  Ta0551
  Tvo:  TVN0605
  Pho:  PH0657
  Pab:  PAB2427
  Pya:  PAE1669
  Sso:  SSO0101
  Ape:  APE2305
  Sce:  YLR060w YPR047w_2
  Spo:  SPAC23A1.12c SPCC736.03c_2
  Ecu:  ECU04g0900
  Aae:  aq_1730_2
  Tma:  TM0822_2
  Fnu:  FN2122_2
  Dra:  DR2357_2
  Cac:  CAC2356_2
  Cgl:  Cgl1357_2
  Mtu:  Rv1650_2
  MtC:  MT1688_2
  Mle:  ML1402_2
  Lla:  L0355_2
  Spy:  SPy0769_2
  Spn:  SP0581_2
  Sau:  SA0986_2
  Lin:  lin1185_2
  Bsu:  BS_pheT_2
  Bha:  BH3110_2
  Syn:  sll1553_2
  Nos:  alr4958_2
  Eco:  pheT_2
  EcZ:  ZpheT_2
  Ecs:  ECs2420_2
  Ype:  YPO2428_2
  Sty:  STM1338_2
  Buc:  BU130_2
  Vch:  VC1220_2
  Pae:  PA2739_2
  Hin:  HI1312_2
  Pmu:  PM0629_2
  Xfa:  XF0742_2
  Nme:  NMB0728_2
  NmA:  NMA0937_2
  Rso:  RSc1582_2
  Hpy:  HP0402_2
  jHp:  jhp0979_2
  Cje:  Cj0896c_2
  Atu:  AGc445_2
  Sme:  SMc00366_2
  Bme:  BMEI2004_2
  Mlo:  mll5053_2
  Ccr:  CC1043_2
  Rpr:  RP418_2
  Rco:  RC0582_2
  Ctr:  CT475_2
  Cpn:  CPn0594_2
  Tpa:  TP0015
  Bbu:  BB0514
  Uur:  UU457_2
  Mpu:  MYPU_3470_2
  Mpn:  MPN106_2
  Mge:  MG195_2
_______

[R] COG0073 EMAP domain
  Afu:  AF1453_2
  Hbs:  VNG0326G_2
  Mac:  MA4046_2
  Mth:  MTH587_2
  Mja:  MJ1263_2
  Mka:  MK0850_2
  Tac:  Ta1046 Ta1284
  Tvo:  TVN0533 TVN0550
  Pho:  PH0285 PH0993_2
  Pab:  PAB0278 PAB2364_2
  Pya:  PAE2942a
  Sso:  SSO0627
  Ape:  APE0675
  Sce:  YGL105w
  Spo:  SPAC30C2.04
  Ecu:  ECU04g1510
  Aae:  aq_1730_1 aq_422
  Tma:  TM0822_1 TM1085_2
  Fnu:  FN1268_2 FN2122_1
  Dra:  DR1433_2 DR2357_1
  Cac:  CAC2356_1 CAC2991_2
  Cgl:  Cgl1357_1
  Mtu:  Rv1650_1
  MtC:  MT1688_1
  Mle:  ML1402_1
  Lla:  L0353_2 L0355_1 L195751
  Spy:  SPy0422_2 SPy0769_1
  Spn:  SP0581_1 SP0788_2 SP1910
  Sau:  SA0448_2 SA0986_1 SA1563
  Lin:  lin0216_2 lin1185_1 lin1648
  Bsu:  BS_csaA BS_metS_2 BS_pheT_1 BS_ytpR
  Bha:  BH0053_2 BH1785 BH3110_1 BH3251
  Syn:  sll1553_1
  Nos:  alr4958_1 asl2455
  Eco:  metG_2 pheT_1 ygjH
  EcZ:  ZmetG_2 ZpheT_1 ZygjH
  Ecs:  ECs2420_1 ECs2920_2 ECs3956
  Ype:  YPO1522_2 YPO2428_1
  Sty:  STM1338_1 STM2155_2
  Buc:  BU130_1
  Vch:  VC1036_2 VC1220_1 VC2336
  Pae:  PA2739_1 PA3221 PA3482_2
  Hin:  HI1276_2 HI1312_1
  Pmu:  PM0303_2 PM0629_1
  Xfa:  XF0549_2 XF0742_1
  Nme:  NMB0030_2 NMB0728_1
  NmA:  NMA0275_2 NMA0937_1
  Rso:  RSc1582_1 RSc2381_2
  Hpy:  HP0402_1 HP0417_2
  jHp:  jhp0967_2 jhp0979_1
  Cje:  Cj0838c_2 Cj0896c_1
  Atu:  AGc4014 AGc445_1
  Sme:  SMc00366_1 SMc04456
  Bme:  BMEI0491 BMEI2004_1
  Mlo:  mll2673 mll5053_1
  Ccr:  CC1043_1
  Rpr:  RP418_1
  Rco:  RC0582_1
  Ctr:  CT475_1
  Cpn:  CPn0594_1
  Tpa:  TP0798_2
  Bbu:  BB0587_2
  Uur:  UU192 UU457_1
  Mpu:  MYPU_3470_1 MYPU_4860
  Mpn:  MPN106_1 MPN663
  Mge:  MG195_1 MG449
_______

[C] COG0074 Succinyl-CoA synthetase, alpha subunit
  Afu:  AF1539 AF2185
  Hbs:  VNG1542G
  Mth:  MTH563
  Mja:  MJ1246
  Mka:  MK0732
  Tac:  Ta1331
  Tvo:  TVN0273
  Pya:  PAE2313
  Sso:  SSO2482
  Ape:  APE1072
  Sce:  YOR142w
  Spo:  SPAC16E8.17c SPBC1703.07_1
  Aae:  aq_1622 aq_1888
  Dra:  DR1248
  Cgl:  Cgl2511
  Mtu:  Rv0952
  MtC:  MT0979
  Mle:  ML0156
  Sau:  SA1089
  Bsu:  BS_sucD
  Bha:  BH2469
  Syn:  sll1557
  Nos:  all3913
  Eco:  fdrA sucD yahF
  EcZ:  ZfdrA ZsucD ZyahF
  Ecs:  ECs0369 ECs0580 ECs0754
  Ype:  YPO1116
  Sty:  STM0529 STM0739
  Vch:  VC2084
  Pae:  PA1589
  Hin:  HI1197
  Pmu:  PM0281
  Xfa:  XF2548
  Nme:  NMB0960
  NmA:  NMA1154
  Rso:  RSc0555
  Cje:  Cj0534
  Atu:  AGc4779
  Sme:  SMc02481
  Bme:  BMEI0139
  Mlo:  mll4303 mlr1326
  Ccr:  CC0338
  Rpr:  RP432
  Rco:  RC0598
  Ctr:  CT822
  Cpn:  CPn0974
_______

[E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
  Afu:  AF1417
  Hbs:  VNG2418G
  Mac:  MA1816
  Mth:  MTH1601
  Mja:  MJ0959
  Mka:  MK0633
  Tac:  Ta1018
  Tvo:  TVN0571
  Pho:  PH1308
  Pab:  PAB1801
  Pya:  PAE3321 PAE3447
  Sso:  SSO0906 SSO2597
  Ape:  APE2423
  Sce:  YFL030w
  Aae:  aq_1591 aq_1593
  Tma:  TM1400
  Dra:  DR0991 DR1350 DR2465
  Cac:  CAC0014 CAC0221
  Lla:  L86881
  Sau:  SA1544
  Bsu:  BS_yurG
  Bha:  BH0762
  Syn:  sll1559
  Nos:  alr1004
  Sty:  STM0431
  Vch:  VC0392 VCA0604
  Pae:  PA1310
  Hpy:  HP0736
  jHp:  jhp0673
  Atu:  AGl3195
  Sme:  SMa1495 SMa2139 SMb21537
  Mlo:  mlr1322 mlr6806
  Ccr:  CC2604
_______

[E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins
  Afu:  AF1323 AF2004 AF2295
  Hbs:  VNG0327G VNG6211G
  Mac:  MA0006 MA1949
  Mth:  MTH1116
  Mja:  MJ0050 MJ0610
  Mka:  MK0672 MK1500
  Pho:  PH0937
  Pab:  PAB1578
  Ape:  APE0020 APE0412 APE2267
  Sce:  YDR294c YMR250w
  Mtu:  Rv3432c
  MtC:  MT3538
  Lla:  L123581
  Lin:  lin2463 lin2528
  Bha:  BH0566 BH2623
  Syn:  sll1641
  Nos:  all0395
  Eco:  gadA gadB
  EcZ:  ZgadA ZgadB
  Ecs:  ECs2098 ECs4397
  Ype:  YPO1193 YPO1529
  Vch:  VC1149 VCA0269
  Hin:  HI0946.1
  Sme:  SMa2402 SMb21414
  Bme:  BMEII0910 BMEII0911
  Mlo:  mll0712 mlr4653 mlr6209
_______

[E] COG0077 Prephenate dehydratase
  Afu:  AF0227_3
  Hbs:  VNG2222G
  Mac:  MA3150
  Mth:  MTH1220
  Mja:  MJ0637
  Mka:  MK0079
  Tac:  Ta0915
  Tvo:  TVN0861
  Pya:  PAE0893
  Sso:  SSO0246
  Sce:  YNL316c
  Spo:  SPBC30D10.16
  Aae:  aq_951_2
  Tma:  TM0155_2
  Dra:  DR1147
  Cac:  CAC0217
  Cgl:  Cgl2836
  Mtu:  Rv3838c
  MtC:  MT3946
  Mle:  ML0078
  Lla:  L0055
  Spn:  SP1369
  Sau:  SA1731
  Lin:  lin1571
  Bsu:  BS_pheA
  Bha:  BH1215
  Syn:  sll1662
  Nos:  alr4334
  Eco:  pheA_2
  EcZ:  ZpheA_2
  Ecs:  ECs3462_2
  Sty:  STM2667_2
  Buc:  BU392_2
  Vch:  VC0705_2
  Pae:  PA3166_2
  Hin:  HI1145_2
  Pmu:  PM0150_2
  Xfa:  XF2325_2
  Nme:  NMB0446_2
  NmA:  NMA2039_2
  Rso:  RSc0904_2
  Cje:  Cj0316_2
  Atu:  AGc151
  Sme:  SMc02899
  Bme:  BMEI1905
  Mlo:  mlr5498
  Ccr:  CC2933
_______

[E] COG0078 Ornithine carbamoyltransferase
  Afu:  AF1255
  Hbs:  VNG6315G
  Mac:  MA3310
  Mth:  MTH1446
  Mja:  MJ0881
  Mka:  MK1070
  Tac:  Ta1330
  Tvo:  TVN0272
  Pho:  PH0726
  Pab:  PAB1502
  Pya:  PAE1985
  Sso:  SSO0871
  Ape:  APE1992
  Sce:  YJL088w
  Spo:  SPAC4G9.10
  Aae:  aq_1711
  Tma:  TM1097
  Dra:  DR0080
  Cac:  CAC0316
  Cgl:  Cgl1006 Cgl1365
  Mtu:  Rv1656
  MtC:  MT1694
  Mle:  ML1410
  Lla:  L0108 L0109 L0113
  Spy:  SPy1544
  Spn:  SP2150
  Sau:  SA1012 SA2427
  Lin:  lin1629
  Bsu:  BS_argF
  Bha:  BH2894
  Syn:  sll0902
  Nos:  alr4907
  Eco:  argF argI ygeW
  EcZ:  Z4209 ZargI
  Ecs:  ECs3743 ECs5231
  Ype:  YPO3446
  Sty:  STM4465 STM4469
  Buc:  BU368
  Vch:  VC2508
  Pae:  PA3537 PA5172
  Hin:  HI0596
  Pmu:  PM0808
  Xfa:  XF0998
  Nme:  NMB1573
  NmA:  NMA1762
  Rso:  RSc2554
  Cje:  Cj0994c
  Atu:  AGc755
  Sme:  SMa0695 SMc02137
  Bme:  BMEI1620
  Mlo:  mlr5647
  Ccr:  CC2242
  Bbu:  BB0842
  Mpn:  MPN306
_______

[E] COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
  Afu:  AF2002 AF2024
  Hbs:  VNG1033G VNG1582G
  Mac:  MA0118 MA0942_1
  Mth:  MTH1587
  Mja:  MJ0955
  Mka:  MK1426
  Tac:  Ta0021m
  Tvo:  TVN0078
  Pho:  PH0377
  Pab:  PAB0026
  Pya:  PAE0377 PAE0918 PAE0958
  Sso:  SSO0448 SSO0592
  Ape:  APE2035
  Sce:  YIL116w
  Spo:  SPBC11B10.02c
  Aae:  aq_2084
  Tma:  TM1040
  Fnu:  FN0973
  Dra:  DR2461 DRB0011
  Cac:  CAC1369 CAC3031
  Cgl:  Cgl0219 Cgl2048
  Mtu:  Rv1600 Rv2231c Rv3772
  MtC:  MT1636 MT2290 MT3881
  Mle:  ML1258
  Lla:  L0065
  Sau:  SA0679 SA2469
  Lin:  lin1133 lin2039
  Bsu:  BS_hisC
  Bha:  BH1589 BH1665
  Syn:  sll1713 sll1958
  Nos:  all4966 alr2092 alr3936
  Eco:  hisC
  EcZ:  ZhisC
  Ecs:  ECs2822
  Ype:  YPO1547
  Sty:  STM0644 STM2073
  Buc:  BU101
  Vch:  VC1134
  Pae:  PA1276 PA2531 PA3165 PA4447
  Hin:  HI0470 HI1166
  Pmu:  PM0838 PM1199
  Xfa:  XF2218
  Nme:  NMB1582
  NmA:  NMA1771
  Rso:  RSc0905 RSc2393 RSc2951
  Cje:  Cj0317 Cj1436c Cj1437c
  Atu:  AGc1866 AGc5096 AGl2426
  Sme:  SMa0387 SMc00710 SMc02393 SMc03885 SMc04281
  Bme:  BMEI0080 BMEI0706 BMEI1308 BMEI1309
  Mlo:  mll1303 mll3536 mll7105 mll7737 mlr5786 mlr5890
  Ccr:  CC1071 CC2223 CC2534
_______

[J] COG0080 Ribosomal protein L11
  Afu:  AF0538
  Hbs:  VNG1108G
  Mac:  MA4274
  Mth:  MTH1679
  Mja:  MJ0373
  Mka:  MK0824
  Tac:  Ta0361
  Tvo:  TVN0423
  Pho:  PH0001
  Pab:  PAB2353
  Pya:  PAE3104
  Sso:  SSO0346
  Ape:  APE2174
  Sce:  YDR418w YEL054c YNL185c
  Spo:  SPAC1486.07c SPCC16C4.13c SPCC31H12.04c
  Ecu:  ECU08g2010
  Aae:  aq_1933
  Tma:  TM0454
  Fnu:  FN2040
  Dra:  DR2046
  Cac:  CAC3148
  Cgl:  Cgl0469
  Mtu:  Rv0640
  MtC:  MT0669
  Mle:  ML1905
  Lla:  L0408
  Spy:  SPy0460
  Spn:  SP0630
  Sau:  SA0495
  Lin:  lin0280
  Bsu:  BS_rplK
  Bha:  BH0119 BH0409
  Syn:  sll1743
  Nos:  alr5300
  Eco:  rplK
  EcZ:  ZrplK
  Ecs:  ECs4906
  Ype:  YPO3751
  Sty:  STM4149
  Buc:  BU038
  Vch:  VC0324
  Pae:  PA4274
  Hin:  HI0517
  Pmu:  PM1743
  Xfa:  XF2637
  Nme:  NMB0127
  NmA:  NMA0146
  Rso:  RSc3038
  Hpy:  HP1202
  jHp:  jhp1125
  Cje:  Cj0474
  Atu:  AGc3575
  Sme:  SMc01321
  Bme:  BMEI0745
  Mlo:  mlr0271
  Ccr:  CC0641
  Rpr:  RP136
  Rco:  RC0177
  Ctr:  CT319
  Cpn:  CPn0077
  Tpa:  TP0237
  Bbu:  BB0393
  Uur:  UU541
  Mpu:  MYPU_0090
  Mpn:  MPN219
  Mge:  MG081
_______

[J] COG0081 Ribosomal protein L1
  Afu:  AF1490
  Hbs:  VNG1105G
  Mac:  MA4275
  Mth:  MTH1680
  Mja:  MJ0510
  Mka:  MK0825
  Tac:  Ta0360
  Tvo:  TVN0422
  Pho:  PH2000
  Pab:  PAB1166
  Pya:  PAE3106
  Sso:  SSO0345
  Ape:  APE2173
  Sce:  YDR116c YGL135w YPL220w
  Spo:  SPBC30D10.18c SPCC1183.08c
  Ecu:  ECU05g0600
  Aae:  aq_1935
  Tma:  TM0455
  Fnu:  FN2039
  Dra:  DR2045
  Cac:  CAC3147
  Cgl:  Cgl0470
  Mtu:  Rv0641
  MtC:  MT0669.1
  Mle:  ML1904
  Lla:  L0399
  Spy:  SPy0461
  Spn:  SP0631
  Sau:  SA0496
  Lin:  lin0281
  Bsu:  BS_rplA
  Bha:  BH0120
  Syn:  sll1744
  Nos:  alr5301
  Eco:  rplA
  EcZ:  ZrplA
  Ecs:  ECs4907
  Ype:  YPO3750
  Sty:  STM4150
  Buc:  BU037
  Vch:  VC0325
  Pae:  PA4273
  Hin:  HI0516
  Pmu:  PM1742
  Xfa:  XF2636
  Nme:  NMB0128
  NmA:  NMA0145
  Rso:  RSc3037
  Hpy:  HP1201
  jHp:  jhp1124
  Cje:  Cj0475
  Atu:  AGc3573
  Sme:  SMc01320
  Bme:  BMEI0746
  Mlo:  mlr0273
  Ccr:  CC0640
  Rpr:  RP137
  Rco:  RC0178
  Ctr:  CT318
  Cpn:  CPn0078
  Tpa:  TP0238
  Bbu:  BB0392
  Uur:  UU540
  Mpu:  MYPU_0100
  Mpn:  MPN220
  Mge:  MG082
_______

[E] COG0082 Chorismate synthase
  Afu:  AF0670
  Hbs:  VNG1230G
  Mac:  MA0550
  Mth:  MTH748
  Mja:  MJ1175
  Mka:  MK0631
  Tac:  Ta0824
  Tvo:  TVN0729
  Pab:  PAB0307
  Pya:  PAE1912
  Sso:  SSO0307
  Ape:  APE0564
  Sce:  YGL148w
  Spo:  SPCC1223.14
  Aae:  aq_081
  Tma:  TM0347
  Fnu:  FN0934
  Dra:  DR0775
  Cac:  CAC0896
  Cgl:  Cgl1585
  Mtu:  Rv2540c
  MtC:  MT2615
  Mle:  ML0516
  Lla:  L0059
  Spy:  SPy0810
  Spn:  SP1374
  Sau:  SA1299
  Lin:  lin2042
  Bsu:  BS_aroF
  Bha:  BH1656
  Syn:  sll1747
  Nos:  all0797
  Eco:  aroC
  EcZ:  ZaroC
  Ecs:  ECs3213
  Ype:  YPO2751
  Sty:  STM2384
  Buc:  BU097
  Vch:  VC2116
  Pae:  PA1681
  Hin:  HI0196
  Pmu:  PM0359
  Xfa:  XF1369
  Nme:  NMB1680
  NmA:  NMA1939
  Rso:  RSc1566
  Hpy:  HP0663
  jHp:  jhp0608
  Cje:  Cj1634c
  Atu:  AGc1368
  Sme:  SMc00007
  Bme:  BMEI1506
  Mlo:  mlr7461
  Ccr:  CC3154
  Ctr:  CT368
  Cpn:  CPn1037
_______

[E] COG0083 Homoserine kinase
  Hbs:  VNG1797G
  Mja:  MJ1104
  Mka:  MK0333
  Tac:  Ta0530
  Tvo:  TVN1006
  Pho:  PH1087
  Pab:  PAB1676
  Pya:  PAE0034
  Sso:  SSO2367
  Ape:  APE2067
  Sce:  YHR025w
  Spo:  SPBC4C3.03
  Aae:  aq_1309
  Tma:  TM0545
  Dra:  DR2390
  Cac:  CAC1235
  Cgl:  Cgl1158
  Mtu:  Rv1296
  MtC:  MT1335
  Mle:  ML1131
  Lla:  L0091
  Spn:  SP1360
  Sau:  SA1166
  Lin:  lin2689
  Bsu:  BS_thrB
  Bha:  BH3420
  Syn:  sll1760
  Nos:  alr0346
  Eco:  thrB
  EcZ:  ZthrB
  Ecs:  ECs0003
  Ype:  YPO0460
  Sty:  STM0003
  Buc:  BU193
  Vch:  VC2363
  Hin:  HI0088
  Pmu:  PM0114
  Xfa:  XF2224
  Hpy:  HP1050
  jHp:  jhp0375
  Cje:  Cj0134
_______

[L] COG0084 Mg-dependent DNase
  Mac:  MA4616
  Mth:  MTH233
  Mja:  MJ1582
  Mka:  MK0546
  Pho:  PH1208
  Pab:  PAB0707
  Pya:  PAE2003
  Sso:  SSO0046 SSO1028
  Ape:  APE0423
  Sce:  YBL055c YMR262w
  Spo:  SPAC688.13 SPBC17A3.08
  Ecu:  ECU03g0200
  Aae:  aq_2060_1
  Tma:  TM0667
  Fnu:  FN1343
  Dra:  DR0146 DRC0006
  Cac:  CAC1397 CAC2989
  Cgl:  Cgl0884
  Mtu:  Rv1008
  MtC:  MT1037
  Mle:  ML0239
  Lla:  L87336
  Spy:  SPy0260
  Spn:  SP1991
  Sau:  SA0449
  Lin:  lin0224
  Bsu:  BS_yabD
  Bha:  BH0054
  Syn:  sll1786
  Nos:  alr1593
  Eco:  tatD ycfH yjjVm
  EcZ:  ZtatD ZycfH ZyjjV
  Ecs:  ECs1478 ECs4769 ECs5336
  Ype:  YPO0434 YPO1607
  Sty:  STM1202 STM3976 STM4564
  Buc:  BU355
  Vch:  VC0103 VC2014 VC2353
  Pae:  PA2866 PA2959 PA3564
  Hin:  HI0081 HI0454 HI1664
  Pmu:  PM0942 PM1675
  Xfa:  XF0177 XF1913
  Nme:  NMB0771 NMB1687
  NmA:  NMA0982 NMA1946
  Rso:  RSc1119 RSc1787
  Hpy:  HP1573
  jHp:  jhp1481
  Cje:  Cj0644
  Atu:  AGc2756 AGpA25
  Sme:  SMc01193
  Bme:  BMEI0986
  Mlo:  mll0418
  Ccr:  CC1822
  Rpr:  RP682
  Rco:  RC1045
  Ctr:  CT594
  Cpn:  CPn0787
  Tpa:  TP0979 TP0994
  Bbu:  BB0194
  Uur:  UU017
  Mpu:  MYPU_0140 MYPU_5360
  Mpn:  MPN009
  Mge:  MG009
_______

[K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit
  Afu:  AF1886 AF1887
  Hbs:  VNG2665G VNG2666G
  Mac:  MA1264 MA1265
  Mth:  MTH1049 MTH1050
  Mja:  MJ1040 MJ1041
  Mka:  MK0686 MK0687
  Tac:  Ta0390
  Tvo:  TVN1182
  Pho:  PH1546
  Pab:  PAB0423
  Pya:  PAE0665
  Sso:  SSO0227 SSO3254
  Ape:  APE1856
  Sce:  YOR151c YOR207c YPR010c
  Spo:  SPAC23G3.01 SPAC4G9.08c SPBP23A10.07
  Ecu:  ECU03g0440 ECU10g0250 ECU11g0370
  Aae:  aq_1939
  Tma:  TM0458
  Fnu:  FN2036
  Dra:  DR0912
  Cac:  CAC3143
  Cgl:  Cgl0481
  Mtu:  Rv0667
  MtC:  MT0695
  Mle:  ML1891
  Lla:  L0137
  Spy:  SPy0098
  Spn:  SP1961
  Sau:  SA0500
  Lin:  lin0285
  Bsu:  BS_rpoB
  Bha:  BH0126
  Syn:  sll1787
  Nos:  alr1594
  Eco:  rpoB
  EcZ:  ZrpoB
  Ecs:  ECs4910
  Ype:  YPO3747
  Sty:  STM4153
  Buc:  BU034
  Vch:  VC0328
  Pae:  PA4270
  Hin:  HI0515
  Pmu:  PM1737
  Xfa:  XF2633
  Nme:  NMB0132
  NmA:  NMA0142
  Rso:  RSc3034
  Hpy:  HP1198_1
  jHp:  jhp1121_1
  Cje:  Cj0478
  Atu:  AGc3569
  Sme:  SMc01317
  Bme:  BMEI0749
  Mlo:  mlr0276
  Ccr:  CC0502
  Rpr:  RP140
  Rco:  RC0181
  Ctr:  CT315
  Cpn:  CPn0081
  Tpa:  TP0241
  Bbu:  BB0389
  Uur:  UU187
  Mpu:  MYPU_5460
  Mpn:  MPN516
  Mge:  MG341
_______

[K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit
  Afu:  AF1888 AF1889
  Hbs:  VNG2662G VNG2664Gm
  Mac:  MA1262 MA1263
  Mth:  MTH1051 MTH1052 MTH297 MTH298 MTH299
  Mja:  MJ1042_1 MJ1042_3 MJ1043_1 MJ1043_3
  Mka:  MK0684 MK0685
  Tac:  Ta0391 Ta0392
  Tvo:  TVN1180 TVN1181
  Pho:  PH1544 PH1545
  Pab:  PAB0424 PAB0425
  Pya:  PAE0666 PAE0667
  Sso:  SSO0223 SSO0225
  Ape:  APE1852 APE1853
  Sce:  YDL140c YOR116c YOR341w
  Spo:  SPBC28F2.12 SPBC4C3.05c SPBC651.08c
  Ecu:  ECU03g0290 ECU04g1400 ECU07g0090
  Aae:  aq_1945
  Tma:  TM0459
  Fnu:  FN2035
  Dra:  DR0911
  Cac:  CAC3142
  Cgl:  Cgl0482
  Mtu:  Rv0668
  MtC:  MT0696
  Mle:  ML1890
  Lla:  L0138
  Spy:  SPy0099
  Spn:  SP1960
  Sau:  SA0501
  Lin:  lin0286
  Bsu:  BS_rpoC
  Bha:  BH0127
  Syn:  sll1789 slr1265
  Nos:  alr1595 alr1596
  Eco:  rpoC
  EcZ:  ZrpoC
  Ecs:  ECs4911
  Ype:  YPO3746
  Sty:  STM4154
  Buc:  BU033
  Vch:  VC0329
  Pae:  PA4269
  Hin:  HI0514
  Pmu:  PM1736
  Xfa:  XF2632
  Nme:  NMB0133
  NmA:  NMA0141
  Rso:  RSc3033
  Hpy:  HP1198_2
  jHp:  jhp1121_2
  Cje:  Cj0479
  Atu:  AGc3568
  Sme:  SMc01316
  Bme:  BMEI0750
  Mlo:  mlr0277
  Ccr:  CC0503
  Rpr:  RP141
  Rco:  RC0182
  Ctr:  CT314
  Cpn:  CPn0082
  Tpa:  TP0242
  Bbu:  BB0388
  Uur:  UU188
  Mpu:  MYPU_5450
  Mpn:  MPN515
  Mge:  MG340
_______

[J] COG0087 Ribosomal protein L3
  Afu:  AF1925
  Hbs:  VNG1689G
  Mac:  MA1072
  Mth:  MTH2
  Mja:  MJ0176
  Mka:  MK0415
  Tac:  Ta1271
  Tvo:  TVN0324
  Pho:  PH1777
  Pab:  PAB2120
  Pya:  PAE1970
  Sso:  SSO0719
  Ape:  APE0227
  Sce:  YGR220c YOR063w
  Spo:  SPAC17A5.03 SPAC644.17c SPAPB8E5.06c
  Ecu:  ECU03g1220 ECU09g1000
  Aae:  aq_009
  Tma:  TM1500
  Fnu:  FN1645
  Dra:  DR0311
  Cac:  CAC3133
  Cgl:  Cgl0496
  Mtu:  Rv0701
  MtC:  MT0728
  Mle:  ML1863
  Lla:  L0401
  Spy:  SPy0049
  Spn:  SP0209
  Sau:  SA2047
  Lin:  lin2781
  Bsu:  BS_rplC
  Bha:  BH0134
  Syn:  sll1799
  Nos:  all4215
  Eco:  rplC
  EcZ:  ZrplC
  Ecs:  ECs4185
  Ype:  YPO0210
  Sty:  STM3440
  Buc:  BU524
  Vch:  VC2596
  Pae:  PA4263
  Hin:  HI0777
  Pmu:  PM1415
  Xfa:  XF1152
  Nme:  NMB0142
  NmA:  NMA0129
  Rso:  RSc3019
  Hpy:  HP1319
  jHp:  jhp1239
  Cje:  Cj1707c
  Atu:  AGc3555
  Sme:  SMc01309
  Bme:  BMEI0757
  Mlo:  mlr0291
  Ccr:  CC1248
  Rpr:  RP659
  Rco:  RC1006
  Ctr:  CT528
  Cpn:  CPn0647
  Tpa:  TP0189
  Bbu:  BB0478
  Uur:  UU231
  Mpu:  MYPU_5890
  Mpn:  MPN165
  Mge:  MG151
_______

[J] COG0088 Ribosomal protein L4
  Afu:  AF1924
  Hbs:  VNG1690G
  Mac:  MA1073
  Mth:  MTH3
  Mja:  MJ0177
  Mka:  MK0414
  Tac:  Ta1270
  Tvo:  TVN0325
  Pho:  PH1776
  Pab:  PAB2121
  Pya:  PAE1971
  Sso:  SSO0718
  Ape:  APE0228
  Sce:  YBR031w YDR012w YML025c
  Spo:  SPBC1711.06 SPBC2D10.08c SPBP8B7.03c
  Ecu:  ECU08g0830
  Aae:  aq_011
  Tma:  TM1499
  Fnu:  FN1644
  Dra:  DR0312
  Cac:  CAC3132
  Cgl:  Cgl0497
  Mtu:  Rv0702
  MtC:  MT0729
  Mle:  ML1862
  Lla:  L0402
  Spy:  SPy0050
  Spn:  SP0210
  Sau:  SA2046
  Lin:  lin2780
  Bsu:  BS_rplD
  Bha:  BH0135
  Syn:  sll1800
  Nos:  all4214
  Eco:  rplD
  EcZ:  ZrplD
  Ecs:  ECs4184
  Ype:  YPO0211
  Sty:  STM3439
  Buc:  BU523
  Vch:  VC2595
  Pae:  PA4262
  Hin:  HI0778
  Pmu:  PM1414
  Xfa:  XF1153
  Nme:  NMB0143
  NmA:  NMA0128
  Rso:  RSc3018
  Hpy:  HP1318
  jHp:  jhp1238
  Cje:  Cj1706c
  Atu:  AGc3553
  Sme:  SMc01308
  Bme:  BMEI0758
  Mlo:  mlr0292
  Ccr:  CC1249
  Rpr:  RP658
  Rco:  RC1005
  Ctr:  CT527
  Cpn:  CPn0646
  Tpa:  TP0190
  Bbu:  BB0479
  Uur:  UU232
  Mpu:  MYPU_5870
  Mpn:  MPN166
  Mge:  MG152
_______

[J] COG0089 Ribosomal protein L23
  Afu:  AF1923
  Hbs:  VNG1691G
  Mac:  MA1074
  Mth:  MTH4
  Mja:  MJ0178
  Mka:  MK0413
  Tac:  Ta1269
  Tvo:  TVN0326
  Pho:  PHS049
  Pab:  PAB7083
  Pya:  PAE1972
  Sso:  SSO6401
  Ape:  APES004
  Sce:  YOL127w
  Spo:  SPBC106.18 SPBC4F6.04
  Ecu:  ECU08g1910 ECU10g0160
  Aae:  aq_012
  Tma:  TM1498
  Fnu:  FN1643
  Dra:  DR0313
  Cac:  CAC3131
  Cgl:  Cgl0498
  Mtu:  Rv0703
  MtC:  MT0730
  Mle:  ML1861
  Lla:  L0419
  Spy:  SPy0051
  Spn:  SP0211
  Sau:  SA2045
  Lin:  lin2779
  Bsu:  BS_rplW
  Bha:  BH0136
  Syn:  sll1801
  Nos:  all4213
  Eco:  rplW
  EcZ:  ZrplW
  Ecs:  ECs4183
  Ype:  YPO0212
  Sty:  STM3438
  Buc:  BU522
  Vch:  VC2594
  Pae:  PA4261
  Hin:  HI0779
  Pmu:  PM1413
  Xfa:  XF1154
  Nme:  NMB0144
  NmA:  NMA0127
  Rso:  RSc3017
  Hpy:  HP1317
  jHp:  jhp1237
  Cje:  Cj1705c
  Atu:  AGc3552
  Sme:  SMc01307
  Bme:  BMEI0759
  Mlo:  msr0293
  Ccr:  CC1250
  Rpr:  RP657
  Rco:  RC1004
  Ctr:  CT526
  Cpn:  CPn0645
  Tpa:  TP0191
  Bbu:  BB0480
  Uur:  UU233
  Mpu:  MYPU_5860
  Mpn:  MPN167_1
  Mge:  MG153
_______

[J] COG0090 Ribosomal protein L2
  Afu:  AF1922
  Hbs:  VNG1692G
  Mac:  MA1075
  Mth:  MTH5
  Mja:  MJ0179
  Mka:  MK0412
  Tac:  Ta1268
  Tvo:  TVN0327
  Pho:  PH1775
  Pab:  PAB2122
  Pya:  PAE0803
  Sso:  SSO0716
  Ape:  APE0218
  Sce:  YEL050c YFR031c-a YIL018w
  Spo:  SPBC2F12.07c SPBC839.04 SPCC16C4.15
  Ecu:  ECU01g0310
  Aae:  aq_013
  Tma:  TM1497
  Fnu:  FN1642
  Dra:  DR0314
  Cac:  CAC3130
  Cgl:  Cgl0499
  Mtu:  Rv0704
  MtC:  MT0731
  Mle:  ML1860
  Lla:  L0400
  Spy:  SPy0052
  Spn:  SP0212
  Sau:  SA2044
  Lin:  lin2778
  Bsu:  BS_rplB
  Bha:  BH0137
  Syn:  sll1802
  Nos:  all4212
  Eco:  rplB
  EcZ:  ZrplB
  Ecs:  ECs4182
  Ype:  YPO0213
  Sty:  STM3437
  Buc:  BU521
  Vch:  VC2593
  Pae:  PA4260
  Hin:  HI0780
  Pmu:  PM1412
  Xfa:  XF1155
  Nme:  NMB0145
  NmA:  NMA0126
  Rso:  RSc3016
  Hpy:  HP1316
  jHp:  jhp1236
  Cje:  Cj1704c
  Atu:  AGc3550
  Sme:  SMc01306
  Bme:  BMEI0760
  Mlo:  mlr0295
  Ccr:  CC1251
  Rpr:  RP656
  Rco:  RC1003
  Ctr:  CT525
  Cpn:  CPn0644
  Tpa:  TP0192
  Bbu:  BB0481
  Uur:  UU234
  Mpu:  MYPU_5850
  Mpn:  MPN168
  Mge:  MG154
_______

[J] COG0091 Ribosomal protein L22
  Afu:  AF1920
  Hbs:  VNG1695G
  Mac:  MA1077
  Mth:  MTH7
  Mja:  MJ0460
  Mka:  MK0841
  Tac:  Ta1266
  Tvo:  TVN0329
  Pho:  PH1773
  Pab:  PAB2396
  Pya:  PAE1782
  Sso:  SSO0713
  Ape:  APE0365
  Sce:  YJL177w YKL180w YNL177c
  Spo:  SPBC2F12.04 SPCC1739.02c SPCC364.03
  Ecu:  ECU07g1410
  Aae:  aq_016a
  Tma:  TM1495
  Fnu:  FN1640
  Dra:  DR0316
  Cac:  CAC3128
  Cgl:  Cgl0501
  Mtu:  Rv0706
  MtC:  MT0733
  Mle:  ML1858
  Lla:  L0418
  Spy:  SPy0055
  Spn:  SP0214
  Sau:  SA2042
  Lin:  lin2776
  Bsu:  BS_rplV
  Bha:  BH0139
  Syn:  sll1803
  Nos:  all4210
  Eco:  rplV
  EcZ:  ZrplV
  Ecs:  ECs4180
  Ype:  YPO0215
  Sty:  STM3435
  Buc:  BU519
  Vch:  VC2591
  Pae:  PA4258
  Hin:  HI0782
  Pmu:  PM1410
  Xfa:  XF1157
  Nme:  NMB0147
  NmA:  NMA0124
  Rso:  RSc3014
  Hpy:  HP1314
  jHp:  jhp1234
  Cje:  Cj1702c
  Atu:  AGc3548
  Sme:  SMc01304
  Bme:  BMEI0762
  Mlo:  mlr0298
  Ccr:  CC1253
  Rpr:  RP654
  Rco:  RC1001
  Ctr:  CT523
  Cpn:  CPn0642
  Tpa:  TP0194
  Bbu:  BB0483
  Uur:  UU236_1
  Mpu:  MYPU_5830
  Mpn:  MPN170
  Mge:  MG156
_______

[J] COG0092 Ribosomal protein S3
  Afu:  AF1919
  Hbs:  VNG1697G
  Mac:  MA1078
  Mth:  MTH8
  Mja:  MJ0461
  Mka:  MK0842
  Tac:  Ta1265
  Tvo:  TVN0330
  Pho:  PH1772
  Pab:  PAB2125
  Pya:  PAE1779
  Sso:  SSO0712
  Ape:  APE0363
  Sce:  YNL178w
  Spo:  SPBC16G5.14c
  Ecu:  ECU09g1250
  Aae:  aq_017
  Tma:  TM1494
  Fnu:  FN1639
  Dra:  DR0317
  Cac:  CAC3127
  Cgl:  Cgl0502
  Mtu:  Rv0707
  MtC:  MT0734
  Mle:  ML1857
  Lla:  L0380
  Spy:  SPy0056
  Spn:  SP0215
  Sau:  SA2041
  Lin:  lin2775
  Bsu:  BS_rpsC
  Bha:  BH0140
  Syn:  sll1804
  Nos:  all4209
  Eco:  rpsC
  EcZ:  ZrpsC
  Ecs:  ECs4179
  Ype:  YPO0216
  Sty:  STM3434
  Buc:  BU518
  Vch:  VC2590
  Pae:  PA4257
  Hin:  HI0783
  Pmu:  PM1409
  Xfa:  XF1158
  Nme:  NMB0148
  NmA:  NMA0123
  Rso:  RSc3013
  Hpy:  HP1313
  jHp:  jhp1233
  Cje:  Cj1701c
  Atu:  AGc3546
  Sme:  SMc01303
  Bme:  BMEI0763
  Mlo:  mlr0300
  Ccr:  CC1254
  Rpr:  RP653
  Rco:  RC1000
  Ctr:  CT522
  Cpn:  CPn0641
  Tpa:  TP0195
  Bbu:  BB0484
  Uur:  UU237
  Mpu:  MYPU_5810
  Mpn:  MPN171
  Mge:  MG157
_______

[J] COG0093 Ribosomal protein L14
  Afu:  AF1915
  Hbs:  VNG1701G
  Mac:  MA1082
  Mth:  MTH13
  Mja:  MJ0466
  Mka:  MK1218
  Tac:  Ta1261
  Tvo:  TVN0335
  Pho:  PH1768
  Pab:  PAB2436
  Pya:  PAE3136
  Sso:  SSO0708
  Ape:  APE0359
  Sce:  YBL087c YER117w YKL170w
  Spo:  SPAC3G9.03 SPBC887.07 SPCC1322.11
  Ecu:  ECU08g1160i
  Aae:  aq_1654
  Tma:  TM1490
  Fnu:  FN1635
  Dra:  DR0321
  Cac:  CAC3123
  Cgl:  Cgl0508
  Mtu:  Rv0714
  MtC:  MT0741
  Mle:  ML1849
  Lla:  L0410
  Spy:  SPy0061
  Spn:  SP0219
  Sau:  SA2037
  Lin:  lin2771
  Bsu:  BS_rplN
  Bha:  BH0144
  Syn:  sll1806
  Nos:  all4205
  Eco:  rplN
  EcZ:  ZrplN
  Ecs:  ECs4175
  Ype:  YPO0220
  Sty:  STM3430
  Buc:  BU514
  Vch:  VC2586
  Pae:  PA4253
  Hin:  HI0788
  Pmu:  PM1405
  Xfa:  XF1162
  Nme:  NMB0152
  NmA:  NMA0119
  Rso:  RSc3009
  Hpy:  HP1309
  jHp:  jhp1229
  Cje:  Cj1697c
  Atu:  AGc3539
  Sme:  SMc01299
  Bme:  BMEI0767
  Mlo:  mlr0305
  Ccr:  CC1258
  Rpr:  RP649
  Rco:  RC0996
  Ctr:  CT518
  Cpn:  CPn0637
  Tpa:  TP0199
  Bbu:  BB0488
  Uur:  UU241
  Mpu:  MYPU_5770
  Mpn:  MPN175
  Mge:  MG161
_______

[J] COG0094 Ribosomal protein L5
  Afu:  AF1912
  Hbs:  VNG1705G
  Mac:  MA1085
  Mth:  MTH16
  Mja:  MJ0469
  Mka:  MK1221
  Tac:  Ta1258
  Tvo:  TVN0338
  Pho:  PH1765
  Pab:  PAB2130
  Pya:  PAE3575
  Sso:  SSO0704
  Ape:  APE0354
  Sce:  YDR237w_2 YGR085c YPR102c
  Spo:  SPAC26A3.07c SPBC17G9.10 SPBC2F12.02c
  Ecu:  ECU02g0610
  Aae:  aq_1652
  Tma:  TM1488
  Fnu:  FN1632
  Dra:  DR0323
  Cac:  CAC3121
  Cgl:  Cgl0510
  Mtu:  Rv0716
  MtC:  MT0742
  Mle:  ML1847
  Lla:  L0403
  Spy:  SPy0063
  Spn:  SP0221
  Sau:  SA2035
  Lin:  lin2769
  Bsu:  BS_rplE
  Bha:  BH0146
  Syn:  sll1808
  Nos:  all4203
  Eco:  rplE
  EcZ:  ZrplE
  Ecs:  ECs4173
  Ype:  YPO0222
  Sty:  STM3428
  Buc:  BU512
  Vch:  VC2584
  Pae:  PA4251
  Hin:  HI0790
  Pmu:  PM1403
  Xfa:  XF1164
  Nme:  NMB0154
  NmA:  NMA0117
  Rso:  RSc3007
  Hpy:  HP1307
  jHp:  jhp1227
  Cje:  Cj1695c
  Atu:  AGc3536
  Sme:  SMc01297
  Bme:  BMEI0769
  Mlo:  mlr0308
  Ccr:  CC1260
  Rpr:  RP647
  Rco:  RC0994
  Ctr:  CT516
  Cpn:  CPn0635
  Tpa:  TP0201
  Bbu:  BB0490
  Uur:  UU243
  Mpu:  MYPU_5750
  Mpn:  MPN177
  Mge:  MG163
_______

[H] COG0095 Lipoate-protein ligase A
  Hbs:  VNG0181G VNG2536C VNG6255C VNG6256G
  Tac:  Ta0513m Ta0514
  Tvo:  TVN0990 TVN0991
  Pho:  PH1487 PH1620a
  Pab:  PAB0376 PAB1916
  Sso:  SSO1060 SSO1112 SSO3157 SSO3159
  Ape:  APE2341 APE2342 APE2581
  Sce:  YJL046w
  Spo:  SPBC17A3.09c
  Aae:  aq_1638_1 aq_1952 aq_264
  Tma:  TM0708
  Cgl:  Cgl1050
  Lla:  L64373
  Spy:  SPy1033 SPy1214 SPy1220
  Spn:  SP1160
  Sau:  SA0316 SA0546 SA0884 SA1363
  Lin:  lin0758 lin0931 lin2711
  Bsu:  BS_yhfJ BS_yqhM BS_ywfL
  Bha:  BH0683 BH2812 BH3822
  Syn:  sll0809
  Nos:  alr1961
  Eco:  lplA
  EcZ:  Z5988_2
  Ecs:  ECs5345_2
  Ype:  YPO2414
  Sty:  STM4576
  Vch:  VC1388
  Pae:  PA4286
  Ctr:  CT285 CT499
  Cpn:  CPn0436 CPn0618
  Mpu:  MYPU_0320 MYPU_4430
  Mpn:  MPN389
  Mge:  MG270
_______

[J] COG0096 Ribosomal protein S8
  Afu:  AF1910
  Hbs:  VNG1707G
  Mac:  MA1087
  Mth:  MTH18
  Mja:  MJ0470
  Mka:  MK1223
  Tac:  Ta1256
  Tvo:  TVN0340
  Pho:  PH1764
  Pab:  PAB2131
  Pya:  PAE2098
  Sso:  SSO0703
  Ape:  APE0352
  Sce:  YJL190c YLR367w YMR158w
  Spo:  SPAC22A12.04c SPAC5D6.01 SPCC736.10c
  Ecu:  ECU09g1350
  Aae:  aq_1651
  Tma:  TM1486
  Fnu:  FN1630
  Dra:  DR2110
  Cac:  CAC3119
  Cgl:  Cgl0524
  Mtu:  Rv0718
  MtC:  MT0743
  Mle:  ML1845
  Lla:  L0385
  Spy:  SPy0065
  Spn:  SP0224
  Sau:  SA2034
  Lin:  lin2767
  Bsu:  BS_rpsH
  Bha:  BH0148
  Syn:  sll1809
  Nos:  all4202
  Eco:  rpsH
  EcZ:  ZrpsH
  Ecs:  ECs4171
  Ype:  YPO0223
  Sty:  STM3426
  Buc:  BU510
  Vch:  VC2582
  Pae:  PA4249
  Hin:  HI0792
  Pmu:  PM1401
  Xfa:  XF1166
  Nme:  NMB0156
  NmA:  NMA0115
  Rso:  RSc3005
  Hpy:  HP1305
  jHp:  jhp1225
  Cje:  Cj1693c
  Atu:  AGc3534
  Sme:  SMc01295
  Bme:  BMEI0771
  Mlo:  mlr0310
  Ccr:  CC1262
  Rpr:  RP645
  Rco:  RC0992
  Ctr:  CT515
  Cpn:  CPn0634
  Tpa:  TP0203
  Bbu:  BB0492
  Uur:  UU245
  Mpu:  MYPU_5730
  Mpn:  MPN179
  Mge:  MG165
_______

[J] COG0097 Ribosomal protein L6P/L9E
  Afu:  AF1909
  Hbs:  VNG1709G
  Mac:  MA1088
  Mth:  MTH19
  Mja:  MJ0471
  Mka:  MK1224
  Tac:  Ta1255
  Tvo:  TVN0341
  Pho:  PH1763
  Pab:  PAB2132
  Pya:  PAE2377
  Sso:  SSO0702
  Ape:  APE0350
  Sce:  YGL147c YHR147c YNL067w
  Spo:  SPAC12G12.08 SPAC4G9.16c SPCC613.06
  Ecu:  ECU02g0800
  Aae:  aq_1649
  Tma:  TM1485
  Fnu:  FN1629
  Dra:  DR2111
  Cac:  CAC3118
  Cgl:  Cgl0525
  Mtu:  Rv0719
  MtC:  MT0744
  Mle:  ML1844
  Lla:  L0404
  Spy:  SPy0066
  Spn:  SP0225
  Sau:  SA2033
  Lin:  lin2766
  Bsu:  BS_rplF
  Bha:  BH0149
  Syn:  sll1810
  Nos:  all4201
  Eco:  rplF
  EcZ:  ZrplF
  Ecs:  ECs4170
  Ype:  YPO0224
  Sty:  STM3425
  Buc:  BU509
  Vch:  VC2581
  Pae:  PA4248
  Hin:  HI0793
  Pmu:  PM1400
  Xfa:  XF1167
  Nme:  NMB0157
  NmA:  NMA0114
  Rso:  RSc3004
  Hpy:  HP1304
  jHp:  jhp1224
  Cje:  Cj1692c
  Atu:  AGc3532
  Sme:  SMc01294
  Bme:  BMEI0772
  Mlo:  mlr0312
  Ccr:  CC1263
  Rpr:  RP644
  Rco:  RC0991
  Ctr:  CT514
  Cpn:  CPn0633
  Tpa:  TP0204
  Bbu:  BB0493
  Uur:  UU246
  Mpu:  MYPU_5720
  Mpn:  MPN180
  Mge:  MG166
_______

[J] COG0098 Ribosomal protein S5
  Afu:  AF1905
  Hbs:  VNG1715G
  Mac:  MA1092
  Mth:  MTH23
  Mja:  MJ0475
  Mka:  MK0029
  Tac:  Ta1251
  Tvo:  TVN0345
  Pho:  PH1757
  Pab:  PAB2136
  Pya:  PAE1182
  Sso:  SSO0698
  Ape:  APE0346
  Sce:  YBR251w_2 YGL123w
  Spo:  SPAC4G9.17c SPCC576.08c
  Ecu:  ECU07g1700
  Aae:  aq_1645
  Tma:  TM1483
  Fnu:  FN1627
  Dra:  DR2113
  Cac:  CAC3116
  Cgl:  Cgl0527
  Mtu:  Rv0721
  MtC:  MT0746
  Mle:  ML1842
  Lla:  L0382
  Spy:  SPy0069
  Spn:  SP0227
  Sau:  SA2031
  Lin:  lin2764
  Bsu:  BS_rpsE
  Bha:  BH0151
  Syn:  sll1812
  Nos:  all4199
  Eco:  rpsE
  EcZ:  ZrpsE
  Ecs:  ECs4168
  Ype:  YPO0226
  Sty:  STM3423
  Buc:  BU507
  Vch:  VC2579
  Pae:  PA4246
  Hin:  HI0795
  Pmu:  PM1398
  Xfa:  XF1169
  Nme:  NMB0159
  NmA:  NMA0112
  Rso:  RSc3002
  Hpy:  HP1302
  jHp:  jhp1222
  Cje:  Cj1690c
  Atu:  AGc3528
  Sme:  SMc01292
  Bme:  BMEI0774
  Mlo:  mlr0315
  Ccr:  CC1265
  Rpr:  RP642
  Rco:  RC0989
  Ctr:  CT512
  Cpn:  CPn0631
  Tpa:  TP0206
  Bbu:  BB0495
  Uur:  UU248
  Mpu:  MYPU_5700
  Mpn:  MPN182
  Mge:  MG168
_______

[J] COG0099 Ribosomal protein S13
  Afu:  AF2285
  Hbs:  VNG1132G
  Mac:  MA1108
  Mth:  MTH34
  Mja:  MJ0189
  Mka:  MK1471
  Tac:  Ta1033
  Tvo:  TVN0562
  Pho:  PH1641
  Pab:  PAB0360
  Pya:  PAE3085
  Sso:  SSO0074
  Ape:  APE1737
  Sce:  YDR450w YML026c YNL081c
  Spo:  SPBC16D10.11c SPCC1795.07 SPCC1259.01c
  Ecu:  ECU06g1110
  Aae:  aq_074
  Tma:  TM1475
  Fnu:  FN1286
  Dra:  DR2125
  Cac:  CAC3107
  Cgl:  Cgl0546
  Mtu:  Rv3460c
  MtC:  MT3567
  Mle:  ML1960
  Lla:  L0390
  Spy:  SPy0077
  Spn:  SP0234
  Sau:  SA2025
  Lin:  lin2757
  Bsu:  BS_rpsM
  Bha:  BH0160
  Syn:  sll1816
  Nos:  all4193
  Eco:  rpsM
  EcZ:  ZrpsM
  Ecs:  ECs4163
  Ype:  YPO0231
  Sty:  STM3418
  Buc:  BU502
  Vch:  VC2574
  Pae:  PA4241
  Hin:  HI0799
  Pmu:  PM1393
  Xfa:  XF1173
  Nme:  NMB0165
  NmA:  NMA0106
  Rso:  RSc2996
  Hpy:  HP1296
  jHp:  jhp1216
  Cje:  Cj1592
  Atu:  AGc3520
  Sme:  SMc01287
  Bme:  BMEI0779
  Mlo:  mlr0323
  Ccr:  CC1270
  Rpr:  RP637
  Rco:  RC0984
  Ctr:  CT509
  Cpn:  CPn0628
  Tpa:  TP0210
  Bbu:  BB0500
  Uur:  UU255
  Mpu:  MYPU_5630
  Mpn:  MPN189
  Mge:  MG175
_______

[J] COG0100 Ribosomal protein S11
  Afu:  AF2283
  Hbs:  VNG1134G
  Mac:  MA1110 MA3817
  Mth:  MTH36
  Mja:  MJ0191
  Mka:  MK1473
  Tac:  Ta1031
  Tvo:  TVN0564
  Pho:  PH1638
  Pab:  PAB0362
  Pya:  PAE3179
  Sso:  SSO0072
  Ape:  APE1742
  Sce:  YCR031c YJL191w YNL306w_2
  Spo:  SPAC1B3.18c SPAC3H5.05c SPBC18H10.13
  Ecu:  ECU03g0650
  Aae:  aq_073
  Tma:  TM1474
  Fnu:  FN1285
  Dra:  DR2126
  Cac:  CAC3106
  Cgl:  Cgl0547
  Mtu:  Rv3459c
  MtC:  MT3566
  Mle:  ML1959
  Lla:  L0388
  Spy:  SPy0078
  Spn:  SP0235
  Sau:  SA2024
  Lin:  lin2756
  Bsu:  BS_rpsK
  Bha:  BH0161
  Syn:  sll1817
  Nos:  all4192
  Eco:  rpsK
  EcZ:  ZrpsK
  Ecs:  ECs4162
  Ype:  YPO0232
  Sty:  STM3417
  Buc:  BU501
  Vch:  VC2573
  Pae:  PA4240
  Hin:  HI0800
  Pmu:  PM1392
  Xfa:  XF1174
  Nme:  NMB0166
  NmA:  NMA0105
  Rso:  RSc2995
  Hpy:  HP1295
  jHp:  jhp1215
  Cje:  Cj1593
  Atu:  AGc3519
  Sme:  SMc01286
  Bme:  BMEI0780
  Mlo:  mlr0324
  Ccr:  CC1271
  Rpr:  RP636
  Rco:  RC0983
  Ctr:  CT508
  Cpn:  CPn0627
  Tpa:  TP0211
  Bbu:  BB0501
  Uur:  UU256
  Mpu:  MYPU_5620
  Mpn:  MPN190
  Mge:  MG176
_______

[J] COG0101 Pseudouridylate synthase
  Afu:  AF1730
  Hbs:  VNG2003G
  Mac:  MA0208
  Mth:  MTH840
  Mja:  MJ1675
  Mka:  MK0888
  Tac:  Ta0932m
  Tvo:  TVN1070
  Pho:  PH1242
  Pab:  PAB1701
  Pya:  PAE1142
  Sce:  YFL001w YGL063w YPL212c
  Spo:  SPAC25B8.05 SPBC887.11 SPCC126.03 SPCC16C4.06c
  Ecu:  ECU04g0890 ECU11g1610
  Aae:  aq_749
  Tma:  TM1574
  Fnu:  FN1600
  Dra:  DR2290
  Cac:  CAC3099
  Cgl:  Cgl0551
  Mtu:  Rv3455c
  MtC:  MT3562
  Mle:  ML1955
  Lla:  L0331
  Spy:  SPy1901
  Spn:  SP1599
  Sau:  SA2018
  Lin:  lin2747
  Bsu:  BS_truA
  Bha:  BH0167
  Syn:  sll1820
  Nos:  all4189
  Eco:  truA
  EcZ:  ZtruA
  Ecs:  ECs3202
  Ype:  YPO2766
  Sty:  STM2368
  Buc:  BU199
  Vch:  VC0999
  Pae:  PA3114
  Hin:  HI1644
  Pmu:  PM0637
  Xfa:  XF1373
  Nme:  NMB2036
  NmA:  NMA0402
  Rso:  RSc1985
  Hpy:  HP0361
  jHp:  jhp1019
  Cje:  Cj0827
  Atu:  AGc644
  Sme:  SMc01099
  Bme:  BMEII0266
  Mlo:  mll4852
  Ccr:  CC0278
  Rpr:  RP857
  Rco:  RC1328
  Ctr:  CT463
  Cpn:  CPn0580
  Tpa:  TP0830
  Bbu:  BB0012
  Uur:  UU536
  Mpn:  MPN196
  Mge:  MG182
_______

[J] COG0102 Ribosomal protein L13
  Afu:  AF1128
  Hbs:  VNG1138G
  Mac:  MA0596
  Mth:  MTH39_1
  Mja:  MJ0194
  Mka:  MK1476
  Tac:  Ta0433
  Tvo:  TVN1135
  Pho:  PH1634
  Pab:  PAB0365
  Pya:  PAE0673
  Sso:  SSO0069
  Ape:  APE1747
  Sce:  YIL133c YNL069c YOR150w
  Spo:  SPAC23A1.11 SPBC16G5.04 SPBC2G2.05 SPBC839.13c
  Ecu:  ECU04g1380
  Aae:  aq_1877
  Tma:  TM1454
  Fnu:  FN0329
  Dra:  DR0174
  Cac:  CAC3098
  Cgl:  Cgl0565
  Mtu:  Rv3443c
  MtC:  MT3548
  Mle:  ML0364
  Lla:  L0409
  Spy:  SPy1932
  Spn:  SP0294
  Sau:  SA2017
  Lin:  lin2746
  Bsu:  BS_rplM
  Bha:  BH0168
  Syn:  sll1821
  Nos:  all4188
  Eco:  rplM
  EcZ:  ZrplM
  Ecs:  ECs4104
  Ype:  YPO3563
  Sty:  STM3345
  Buc:  BU391
  Vch:  VC0570
  Pae:  PA4433
  Hin:  HI1443
  Pmu:  PM0520
  Xfa:  XF1537
  Nme:  NMB2057
  NmA:  NMA0378
  Rso:  RSc0490
  Hpy:  HP0084
  jHp:  jhp0077
  Cje:  Cj1480c
  Atu:  AGc2301
  Sme:  SMc01804
  Bme:  BMEI1168
  Mlo:  mll8458
  Ccr:  CC1376
  Rpr:  RP233
  Rco:  RC0315
  Ctr:  CT125
  Cpn:  CPn0247
  Tpa:  TP1025
  Bbu:  BB0339
  Uur:  UU577
  Mpu:  MYPU_4950
  Mpn:  MPN617
  Mge:  MG418
_______

[J] COG0103 Ribosomal protein S9
  Afu:  AF1129
  Hbs:  VNG1139Gm
  Mac:  MA0597
  Mth:  MTH39_2
  Mja:  MJ0195
  Mka:  MK1477
  Tac:  Ta0432
  Tvo:  TVN1136
  Pho:  PH1633
  Pab:  PAB0366
  Pya:  PAE0674
  Sso:  SSO0068
  Ape:  APE1749
  Sce:  YBR146w_2 YDL083c YMR143w
  Spo:  SPAC29A4.03c SPAC664.04c SPBC18H10.14
  Ecu:  ECU03g0310
  Aae:  aq_1878
  Tma:  TM1453
  Fnu:  FN0330
  Dra:  DR0175
  Cac:  CAC3097
  Cgl:  Cgl0566
  Mtu:  Rv3442c
  MtC:  MT3547
  Mle:  ML0365
  Lla:  L0386
  Spy:  SPy1931
  Spn:  SP0295
  Sau:  SA2016
  Lin:  lin2745
  Bsu:  BS_rpsI
  Bha:  BH0169
  Syn:  sll1822
  Nos:  all4187
  Eco:  rpsI
  EcZ:  ZrpsI
  Ecs:  ECs4103
  Ype:  YPO3562
  Sty:  STM3344
  Buc:  BU390
  Vch:  VC0571
  Pae:  PA4432
  Hin:  HI1442
  Pmu:  PM0521
  Xfa:  XF1536
  Nme:  NMB2056
  NmA:  NMA0379
  Rso:  RSc0491
  Hpy:  HP0083
  jHp:  jhp0076
  Cje:  Cj1479c
  Atu:  AGc2299
  Sme:  SMc01803
  Bme:  BMEI1169
  Mlo:  mll8456
  Ccr:  CC1377
  Rpr:  RP234
  Rco:  RC0316
  Ctr:  CT126
  Cpn:  CPn0246
  Tpa:  TP1024
  Bbu:  BB0338
  Uur:  UU576
  Mpu:  MYPU_4960
  Mpn:  MPN616
  Mge:  MG417
_______

[F] COG0104 Adenylosuccinate synthase
  Afu:  AF0841
  Hbs:  VNG1089G
  Mac:  MA1919 MA4118
  Mth:  MTH615
  Mja:  MJ0561
  Mka:  MK0235
  Tac:  Ta1367m
  Tvo:  TVN0287
  Pho:  PH0438
  Pab:  PAB1303
  Pya:  PAE0974
  Sso:  SSO0242
  Sce:  YNL220w
  Spo:  SPAC144.03
  Aae:  aq_1290
  Tma:  TM1096
  Fnu:  FN1605
  Dra:  DR0035
  Cac:  CAC3593
  Cgl:  Cgl2708
  Mtu:  Rv0357c
  MtC:  MT0373
  Mle:  ML0280
  Lla:  L12179
  Spy:  SPy0160
  Spn:  SP0019
  Sau:  SA0016
  Lin:  lin0048
  Bsu:  BS_purA
  Bha:  BH4028
  Syn:  sll1823
  Nos:  alr4784
  Eco:  purA
  EcZ:  ZpurA
  Ecs:  ECs5153
  Ype:  YPO0378
  Sty:  STM4366
  Buc:  BU566
  Vch:  VC2602
  Pae:  PA4938
  Hin:  HI1633
  Pmu:  PM0938
  Xfa:  XF0455
  Nme:  NMB0815
  NmA:  NMA1024
  Rso:  RSc1226
  Hpy:  HP0255
  jHp:  jhp0239
  Cje:  Cj1498c
  Atu:  AGc4442
  Sme:  SMc00643
  Bme:  BMEI0351
  Mlo:  mll3873
  Ccr:  CC3103
_______

[F] COG0105 Nucleoside diphosphate kinase
  Afu:  AF0767
  Hbs:  VNG1160G
  Mac:  MA1524
  Mth:  MTH258
  Mja:  MJ1265
  Mka:  MK1591
  Tac:  Ta1113
  Tvo:  TVN0452
  Pho:  PH0698
  Pab:  PAB1489
  Pya:  PAE1561
  Sso:  SSO0230
  Ape:  APE2377
  Sce:  YKL067w
  Spo:  SPAC806.07
  Ecu:  ECU06g1530
  Aae:  aq_1590
  Dra:  DR2499
  Cac:  CAC0997
  Cgl:  Cgl2319
  Mtu:  Rv2445c
  MtC:  MT2521
  Mle:  ML1469
  Spn:  SP1959
  Sau:  SA1301
  Lin:  lin2043
  Bsu:  BS_ndk
  Bha:  BH1654
  Syn:  sll1852
  Nos:  alr3402
  Eco:  ndk
  EcZ:  Zndk
  Ecs:  ECs3380
  Ype:  YPO2883
  Sty:  STM2526
  Vch:  VC0756
  Pae:  PA3807
  Hin:  HI0876
  Pmu:  PM1028
  Xfa:  XF0458
  Nme:  NMB1307
  NmA:  NMA1521
  Rso:  RSc1211
  Hpy:  HP0198
  jHp:  jhp0184
  Cje:  Cj0332c
  Atu:  AGc2077
  Sme:  SMc00595
  Bme:  BMEI1256
  Mlo:  mll7917
  Ccr:  CC1699
  Rpr:  RP055
  Rco:  RC0083
  Ctr:  CT500
  Cpn:  CPn0619
  Tpa:  TP1010
  Bbu:  BB0463
_______

[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
  Afu:  AF0986
  Hbs:  VNG2294G
  Mac:  MA0218
  Mth:  MTH843
  Mja:  MJ1532
  Mka:  MK0364
  Pya:  PAE0991
  Sso:  SSO0594
  Sce:  YIL020c
  Spo:  SPAC3F10.09
  Aae:  aq_1303
  Tma:  TM1037
  Dra:  DR2495
  Cac:  CAC0940
  Cgl:  Cgl2043
  Mtu:  Rv1603
  MtC:  MT1639
  Mle:  ML1261
  Lla:  L0070
  Sau:  SA2466
  Lin:  lin0573
  Bsu:  BS_hisA
  Bha:  BH3579
  Syn:  slr0652
  Nos:  all4506
  Eco:  hisA
  EcZ:  ZhisA
  Ecs:  ECs2825
  Ype:  YPO1544
  Sty:  STM2076
  Buc:  BU104
  Vch:  VC1137
  Pae:  PA5141
  Hin:  HI0473
  Pmu:  PM1203
  Xfa:  XF2215
  Nme:  NMB0629
  NmA:  NMA0839
  Rso:  RSc2947
  Cje:  Cj1601
  Atu:  AGc63
  Sme:  SMc02570
  Bme:  BMEI2042
  Mlo:  mlr5014
  Ccr:  CC3736
_______

[E] COG0107 Imidazoleglycerol-phosphate synthase
  Afu:  AF0819
  Hbs:  VNG0862G
  Mac:  MA0541
  Mth:  MTH1343
  Mja:  MJ0411
  Mka:  MK0173
  Pya:  PAE0989
  Sso:  SSO0597
  Sce:  YBR248c_2
  Spo:  SPBC887.20c_2
  Aae:  aq_181
  Tma:  TM1036
  Dra:  DR0732
  Cac:  CAC0941
  Cgl:  Cgl2041
  Mtu:  Rv1605
  MtC:  MT1641
  Mle:  ML1263
  Lla:  L0071
  Sau:  SA2465
  Lin:  lin0572
  Bsu:  BS_hisF
  Bha:  BH3578
  Syn:  sll1893
  Nos:  alr2895
  Eco:  hisF
  EcZ:  ZhisF
  Ecs:  ECs2826
  Ype:  YPO1543
  Sty:  STM2077
  Buc:  BU105
  Vch:  VC1138
  Pae:  PA3151 PA5140
  Hin:  HI0474
  Pmu:  PM1204
  Xfa:  XF2214
  Nme:  NMB0628
  NmA:  NMA0838
  Rso:  RSc2946
  Cje:  Cj1314c Cj1603
  Atu:  AGc62
  Sme:  SMc02569
  Bme:  BMEI2041
  Mlo:  mlr5016
  Ccr:  CC3737
_______

[H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase
  Afu:  AF0484_1 AF2107
  Hbs:  VNG2125Gm
  Mac:  MA0548
  Mth:  MTH1499
  Mja:  MJ0055
  Mka:  MK1397
  Pya:  PAE2986
  Sso:  SSO0402
  Ape:  APE0986
  Sce:  YDR487c
  Spo:  SPBC23E6.06c
  Aae:  aq_350_1
  Tma:  TM1826_1
  Fnu:  FN1508_1
  Dra:  DR0155_1
  Cac:  CAC0592_1
  Cgl:  Cgl1557_1
  Mtu:  Rv1415_1 Rv1940_1
  MtC:  MT1458_1 MT1990_1
  Mle:  ML0559_1
  Lla:  L0165_1
  Spn:  SP0176_1
  Sau:  SA1587_1
  Bsu:  BS_ribA_1
  Bha:  BH1556_1
  Syn:  sll1894_1
  Nos:  all3536_1
  Eco:  ribB
  EcZ:  ZribB
  Ecs:  ECs3929
  Ype:  YPO0658
  Sty:  STM3195
  Buc:  BU059
  Vch:  VC2269_1 VCA1060
  Pae:  PA4054_1
  Hin:  HI0764
  Pmu:  PM1385
  Xfa:  XF0953_1
  Nme:  NMB1256_1
  NmA:  NMA1429_1
  Rso:  RSc0713_1 RSp1191
  Hpy:  HP0804_1
  jHp:  jhp0740_1
  Cje:  Cj0572_1
  Atu:  AGc1366_1 AGc3478
  Sme:  SMc00008_1
  Bme:  BMEI1505_1
  Mlo:  mlr7463_1
  Ccr:  CC0887_1
  Ctr:  CT731_1
  Cpn:  CPn0872_1
_______

[O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor)
  Afu:  AF2036
  Hbs:  VNG0666G_2
  Tac:  Ta0435
  Tvo:  TVN1132
  Pya:  PAE1333 PAE3597
  Sso:  SSO0656
  Ape:  APE1878
  Sce:  YPL172c
  Spo:  SPBC365.02c
  Aae:  aq_154
  Dra:  DR2618
  Cgl:  Cgl1535
  Mtu:  Rv1451
  MtC:  MT1498
  Mle:  ML0584
  Sau:  SA0965
  Lin:  lin2163
  Bsu:  BS_ctaB BS_yjdK
  Bha:  BH2616
  Syn:  sll1899
  Nos:  all0948
  Eco:  cyoE
  EcZ:  ZcyoE
  Ecs:  ECs0482
  Ype:  YPO3168
  Sty:  STM0439
  Buc:  BU468
  Pae:  PA0113 PA1321
  Xfa:  XF1360
  Rso:  RSc0372
  Atu:  AGc1402
  Sme:  SMc00450
  Bme:  BMEI1464
  Mlo:  mll1047 mlr7493
  Ccr:  CC3405
  Rpr:  RP346
  Rco:  RC0469
_______

[R] COG0110 Acetyltransferase (isoleucine patch superfamily)
  Hbs:  VNG1385G VNG2025G
  Mac:  MA0410 MA0513 MA1032 MA2174 MA3713
  Mth:  MTH272
  Mja:  MJ1064
  Mka:  MK0874 MK1061
  Pab:  PAB0773
  Pya:  PAE1472
  Sce:  YJL218w
  Spo:  SPAC18B11.09c
  Tma:  TM0759
  Dra:  DR0580
  Cac:  CAC0777 CAC2109 CAC2343 CAC2692
  Cgl:  Cgl0143 Cgl0360
  Mtu:  Rv1505c Rv3034c
  MtC:  MT1553 MT3119
  Mle:  ML1719
  Lla:  L0026 L120883 L142326 L1734467
  Spy:  SPy1065
  Spn:  SP0074
  Sau:  SA0151 SA0717 SA2342
  Lin:  lin0451 lin0669 lin2623
  Bsu:  BS_yvfD BS_yvoF BS_yyaI
  Bha:  BH3001 BH3586
  Syn:  sll1511 sll1900 slr1084
  Nos:  all1011 alr0555 alr1276 alr3178
  Eco:  b0359 lacA wbbJ wcaF ylaD
  EcZ:  ZlacA ZwbdR ZwcaF ZylaD
  Ecs:  ECs0395 ECs0512 ECs2831 ECs2859
  Sty:  STM0472 STM2110
  Vch:  VC0238 VC0252 VCA0253 VCA0300 VCA0473 VCA0836
  Pae:  PA0706 PA3156 PA3853
  Pmu:  PM1056 PM1197
  Nme:  NMB1820_2
  NmA:  NMA0494 NMA0639_2
  Rso:  RSp1007 RSp1012
  Cje:  Cj1123c Cj1321
  Atu:  AGc1304 AGc2119 AGc291 AGc527 AGl141 AGl286 AGl543_2
        AGpA204
  Sme:  SMa0772 SMb20765 SMb20825 SMb21427 SMc01797
  Bme:  BMEI0594 BMEII0843
  Mlo:  mll1530 mll2311 mll2768 mll4701 mlr2192 mlr3351 mlr4814
  Ccr:  CC1011
  Rco:  RC0554
  Ctr:  CT629
  Cpn:  CPn0749
_______

[HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases
  Afu:  AF0813 AF1779
  Hbs:  VNG0104G VNG1437G VNG2424G
  Mac:  MA0592 MA1334
  Mth:  MTH970
  Mja:  MJ1018
  Mka:  MK0297 MK0319 MK0320
  Tac:  Ta0779
  Tvo:  TVN1198
  Pho:  PH1387
  Pab:  PAB0514
  Pya:  PAE3320
  Sso:  SSO0905
  Ape:  APE2507
  Sce:  YER081w YIL074c
  Spo:  SPCC4G3.01
  Aae:  aq_1905
  Tma:  TM0327 TM1401
  Dra:  DR1291 DR1701
  Cac:  CAC0015 CAC0089 CAC0365
  Cgl:  Cgl0070 Cgl1254 Cgl2304
  Mtu:  Rv0728c Rv2996c
  MtC:  MT0753 MT3074
  Mle:  ML1692
  Lla:  L0084 L51032
  Sau:  SA1545 SA1679
  Lin:  lin1792 lin2956
  Bsu:  BS_serA BS_yoaD
  Bha:  BH0949 BH1602
  Syn:  sll1908 slr2123
  Nos:  alr1890
  Eco:  pdxB serA ycdW
  EcZ:  ZpdxB ZserA ZycdW
  Ecs:  ECs1410 ECs3204 ECs3784
  Ype:  YPO0914 YPO1288 YPO2763
  Sty:  STM1135 STM2370 STM3062
  Vch:  VC0267 VC2108 VC2481 VCA0630
  Pae:  PA0316 PA1296 PA1375
  Hin:  HI0465
  Pmu:  PM1671
  Xfa:  XF2206
  Rso:  RSc0016 RSc0262
  Hpy:  HP0397
  jHp:  jhp0984
  Cje:  Cj0891c
  Atu:  AGc2588 AGl1616 AGl2264 AGl2846 AGl3399 AGl3553 AGpA311
        AGpA470 AGpA578 AGpA699
  Sme:  SMa1347 SMa1838 SMb20535 SMc00340 SMc00641 SMc01622 SMc02045
        SMc02828
  Bme:  BMEI0349 BMEI1939 BMEII0813
  Mlo:  mll1021 mll3875 mll5489 mll7048 mlr2095 mlr3367 mlr4729
        mlr4731 mlr7269 mlr9208
  Ccr:  CC3215
_______

[E] COG0112 Glycine/serine hydroxymethyltransferase
  Afu:  AF0852
  Hbs:  VNG1414G
  Mac:  MA3520
  Mth:  MTH1380
  Mja:  MJ1597
  Mka:  MK0122
  Tac:  Ta0811 Ta1509
  Tvo:  TVN0047 TVN0796
  Pho:  PH1654
  Pab:  PAB2018
  Pya:  PAE0798
  Sso:  SSO0530
  Ape:  APE1962
  Sce:  YBR263w YLR058c
  Spo:  SPAC18G6.04c SPAC24C9.12c
  Ecu:  ECU01g0190 ECU01g1420
  Aae:  aq_479
  Tma:  TM0720
  Dra:  DR0038
  Cac:  CAC2264
  Cgl:  Cgl0969
  Mtu:  Rv0070c Rv1093
  MtC:  MT0076 MT1125
  Mle:  ML1953
  Lla:  L0082
  Spy:  SPy1145
  Spn:  SP1024
  Sau:  SA1915
  Lin:  lin2683
  Bsu:  BS_glyA
  Bha:  BH3765
  Syn:  sll1931
  Nos:  alr4806
  Eco:  glyA
  EcZ:  ZglyA
  Ecs:  ECs3417
  Ype:  YPO2907
  Sty:  STM2555
  Buc:  BU289
  Vch:  VC0941 VCA0278
  Pae:  PA2444 PA4602 PA5415
  Hin:  HI0889
  Pmu:  PM0225
  Xfa:  XF0946
  Nme:  NMB1055
  NmA:  NMA1254
  Rso:  RSc0729 RSp0055
  Hpy:  HP0183
  jHp:  jhp0171
  Cje:  Cj0402
  Atu:  AGc2156 AGl1099
  Sme:  SMa2135 SMc01770
  Bme:  BMEI1191 BMEI1192
  Mlo:  mlr6114 mlr8400
  Ccr:  CC1357
  Rpr:  RP743
  Rco:  RC1146
  Ctr:  CT432
  Cpn:  CPn0521
  Tpa:  TP0329
  Bbu:  BB0601
  Mpu:  MYPU_3390
  Mpn:  MPN576
  Mge:  MG394
_______

[H] COG0113 Delta-aminolevulinic acid dehydratase
  Afu:  AF1974
  Hbs:  VNG2322G
  Mac:  MA0578
  Mth:  MTH744
  Mja:  MJ0643
  Mka:  MK0198
  Tac:  Ta0955
  Tvo:  TVN1100
  Pya:  PAE0583
  Sso:  SSO0181
  Ape:  APE2300
  Sce:  YGL040c
  Spo:  SPAC1805.06c
  Aae:  aq_2109
  Fnu:  FN0460
  Dra:  DR2160
  Cac:  CAC0100
  Cgl:  Cgl0426
  Mtu:  Rv0512
  MtC:  MT0533
  Mle:  ML2419
  Sau:  SA1492
  Lin:  lin1589
  Bsu:  BS_hemB
  Bha:  BH3044
  Syn:  sll1994
  Nos:  all4725 alr4380
  Eco:  hemB
  EcZ:  ZhemB
  Ecs:  ECs0423
  Ype:  YPO3771
  Sty:  STM0372
  Vch:  VC0105
  Pae:  PA5243
  Pmu:  PM1692
  Xfa:  XF2306
  Nme:  NMB0801
  NmA:  NMA1011
  Rso:  RSc2989
  Hpy:  HP0163
  jHp:  jhp0150
  Cje:  Cj0995c
  Atu:  AGc2149
  Sme:  SMc01766
  Bme:  BMEI1197
  Mlo:  mll8390
  Ccr:  CC1347
  Rpr:  RP539
  Rco:  RC0798
  Ctr:  CT633
  Cpn:  CPn0744
_______

[C] COG0114 Fumarase
  Hbs:  VNG1356G
  Mac:  MA1001
  Pya:  PAE2743
  Sso:  SSO1077
  Ape:  APE1816
  Sce:  YPL262w
  Spo:  SPCC18.18c
  Dra:  DR2627
  Cgl:  Cgl0981
  Mtu:  Rv1098c
  MtC:  MT1130
  Mle:  ML1947
  Sau:  SA1669
  Lin:  lin2328
  Bsu:  BS_citG
  Bha:  BH1445
  Syn:  slr0018
  Eco:  fumC
  EcZ:  ZfumC
  Ecs:  ECs2317
  Ype:  YPO2264
  Sty:  STM1469
  Vch:  VC1573
  Pae:  PA0854 PA4470
  Hin:  HI1398
  Pmu:  PM0823
  Xfa:  XF1554
  Nme:  NMB1458
  NmA:  NMA1670
  Rso:  RSp1279
  Hpy:  HP1325
  jHp:  jhp1245
  Cje:  Cj1364c
  Atu:  AGc2979
  Sme:  SMc00149
  Bme:  BMEII1051
  Mlo:  mll8172
  Ccr:  CC2109
  Rpr:  RP665
  Rco:  RC1012
  Ctr:  CT855
  Cpn:  CPn1013
_______

[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
  Afu:  AF0933
  Hbs:  VNG0387G VNG2122G
  Mac:  MA4349
  Mth:  MTH1430
  Mja:  MJ1008
  Mka:  MK1627
  Pya:  PAE3297
  Sce:  YHR208w YJR148w YMR289w
  Spo:  SPBC19G7.02 SPBC428.02c
  Aae:  aq_1606 aq_1893
  Tma:  TM0831
  Fnu:  FN1729
  Dra:  DR0195 DR1626
  Cac:  CAC0792 CAC1479 CAC2226
  Cgl:  Cgl0800 Cgl0971 Cgl2155 Cgl2526
  Mtu:  Rv0812 Rv2210c
  MtC:  MT0833 MT2266
  Mle:  ML0866
  Lla:  L0086 L0179_2
  Spy:  SPy0911 SPy1990_2
  Spn:  SP0665_2 SP0856
  Sau:  SA0512 SA0670 SA1571
  Lin:  lin0977 lin1660 lin2893_2
  Bsu:  BS_pabC BS_ybgE BS_yheM BS_ywaA
  Bha:  BH0092 BH2156 BH2811
  Syn:  slr0032 slr0887
  Nos:  alr1260
  Eco:  ilvE pabC
  EcZ:  ZilvE ZpabC
  Ecs:  ECs1474 ECs4704
  Ype:  YPO1603 YPO3899
  Sty:  STM1198 STM3903
  Vch:  VC0029 VC2018
  Pae:  PA2964 PA5013
  Hin:  HI1169 HI1193
  Pmu:  PM0566 PM1465
  Xfa:  XF0075 XF1999
  Nme:  NMB0337 NMB1970_2
  NmA:  NMA0477_2 NMA2151
  Rso:  RSc0567 RSc2633_2 RSp0714 RSp1327 RSp1358
  Hpy:  HP0293_2 HP1468
  jHp:  jhp0278_2 jhp1361
  Cje:  Cj0269c Cj0862c_2
  Atu:  AGc1592 AGc4563 AGl2139 AGpA698
  Sme:  SMa0093 SMc00042 SMc01047 SMc02896 SMc04014
  Bme:  BMEII0014 BMEII0363 BMEII0612 BMEII0613
  Mlo:  mll2664 mll9205 mlr0401 mlr1594 mlr3007 mlr7635
  Ccr:  CC1744 CC2929 CC2952
  Rpr:  RP428
  Rco:  RC0594
_______

[L] COG0116 Predicted N6-adenine-specific DNA methylase
  Afu:  AF2178
  Mja:  MJ0438
  Mka:  MK0969
  Pho:  PH0644
  Pab:  PAB0923
  Pya:  PAE3215
  Ape:  APE0557
  Fnu:  FN0344
  Dra:  DR1669
  Cac:  CAC0223
  Lla:  L100263
  Spy:  SPy1644
  Spn:  SP0373
  Sau:  SA1277
  Lin:  lin2000
  Bsu:  BS_ypsC
  Bha:  BH1771
  Syn:  slr0064
  Eco:  ycbY_1
  EcZ:  ZycbY_1
  Ecs:  ECs1032_1
  Ype:  YPO1418_1
  Sty:  STM1061_1
  Buc:  BU363_1
  Vch:  VC1488_1
  Pae:  PA3048_1
  Hin:  HI0116_1
  Pmu:  PM0304_1
  Xfa:  XF2651_1
  Nme:  NMB0455
  NmA:  NMA2030
  Rso:  RSc2739
_______

[H] COG0117 Pyrimidine deaminase
  Sce:  YOL066c_2
  Spo:  SPCC4G3.16_2
  Aae:  aq_138_1
  Tma:  TM1828_1
  Fnu:  FN1506_1
  Dra:  DR0153_1
  Cac:  CAC0590_1
  Cgl:  Cgl1559_1
  Mtu:  Rv1409_1
  MtC:  MT1453_1
  Mle:  ML0555_1
  Lla:  L0163_1
  Spn:  SP0178_1
  Sau:  SA1589_1
  Bsu:  BS_ribG_1
  Bha:  BH1554_1
  Syn:  slr0066_1
  Nos:  all0082_1
  Eco:  ribD_1
  EcZ:  ZribD_1
  Ecs:  ECs0467_1
  Ype:  YPO3183_1
  Sty:  STM0416_1
  Buc:  BU461
  Vch:  VC2271_1
  Pae:  PA4056_1
  Hin:  HI0944_1
  Pmu:  PM0749_1
  Xfa:  XF0950_1
  Nme:  NMB1817_1
  NmA:  NMA0644_1
  Rso:  RSc0715_1
  Hpy:  HP1505_1
  jHp:  jhp1398_1
  Cje:  Cj1622_1
  Atu:  AGc2159_1
  Sme:  SMc01772_1
  Bme:  BMEI1189_1
  Mlo:  mlr8405_1
  Ccr:  CC0885_1
  Ctr:  CT730_1
  Cpn:  CPn0871_1
_______

[E] COG0118 Glutamine amidotransferase
  Afu:  AF2265
  Hbs:  VNG2087G
  Mac:  MA0913
  Mth:  MTH1524
  Mja:  MJ0506
  Mka:  MK1510
  Pya:  PAE0956
  Sso:  SSO0600
  Sce:  YBR248c_1
  Spo:  SPBC887.20c_1
  Aae:  aq_732
  Tma:  TM1038
  Dra:  DR0426
  Cac:  CAC0939
  Cgl:  Cgl2044
  Mtu:  Rv1602
  MtC:  MT1638
  Mle:  ML1260
  Lla:  L0069
  Sau:  SA2467
  Lin:  lin0574
  Bsu:  BS_hisH
  Bha:  BH3580
  Syn:  slr0084
  Nos:  all1368
  Eco:  hisH
  EcZ:  ZhisH
  Ecs:  ECs2824
  Ype:  YPO1545
  Sty:  STM2075
  Buc:  BU103
  Vch:  VC1136
  Pae:  PA3152 PA5142
  Hin:  HI0472
  Pmu:  PM1202
  Xfa:  XF2216
  Nme:  NMB0630
  NmA:  NMA0840
  Rso:  RSc2948
  Cje:  Cj1315c Cj1600
  Atu:  AGc64
  Sme:  SMc02572
  Bme:  BMEI2043
  Mlo:  mlr5011
  Ccr:  CC3735
_______

[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases
  Afu:  AF0219 AF0957
  Mac:  MA1225 MA1226 MA3342 MA3793 MA4264 MA4615
  Mth:  MTH1481 MTH1630 MTH723
  Mja:  MJ0503 MJ1195 MJ1392
  Mka:  MK0275 MK0391 MK1209
  Tvo:  TVN0909
  Pho:  PH1727
  Pab:  PAB0286 PAB0890 PAB0894
  Pya:  PAE1330 PAE1986 PAE1993
  Sso:  SSO0127 SSO0977 SSO2407
  Sce:  YDL131w YDL182w YNL104c YOR108w
  Spo:  SPBC1105.02c SPBC3E7.16c
  Aae:  aq_2090 aq_356
  Tma:  TM0552 TM0553
  Dra:  DR1238 DR1482
  Cac:  CAC0260 CAC0261 CAC0273 CAC0970 CAC3174
  Cgl:  Cgl0250
  Mtu:  Rv3469c Rv3534c Rv3710
  MtC:  MT3575 MT3638 MT3813
  Mle:  ML2324
  Spn:  SP1258
  Sau:  SA0837 SA1862
  Lin:  lin2094
  Bsu:  BS_leuA BS_yngG
  Bha:  BH1134 BH3058
  Syn:  sll1564 slr0186
  Nos:  alr1407 alr2968 alr3522 alr4840
  Eco:  leuA mhpE
  EcZ:  ZleuA ZmhpE
  Ecs:  ECs0078 ECs0407
  Ype:  YPO0533
  Sty:  STM0113
  Buc:  BUpL04
  Vch:  VC2490
  Pae:  PA1217 PA2011 PA3792
  Hin:  HI0986
  Pmu:  PM1962
  Xfa:  XF1818
  Nme:  NMB1070
  NmA:  NMA1270
  Rso:  RSc0261 RSc2072 RSp0322 RSp0895
  Cje:  Cj1719c
  Atu:  AGc4114 AGl2702
  Sme:  SMb21125 SMc02546 SMc02717
  Bme:  BMEI0451 BMEI1270 BMEI1926
  Mlo:  mlr2792 mlr7805
  Ccr:  CC0467 CC1541
_______

[G] COG0120 Ribose 5-phosphate isomerase
  Afu:  AF0943
  Hbs:  VNG2272G
  Mac:  MA1683
  Mth:  MTH608
  Mja:  MJ1603
  Mka:  MK1665
  Tac:  Ta0878
  Tvo:  TVN0717
  Pho:  PH1375
  Pab:  PAB0522
  Pya:  PAE1027
  Sso:  SSO0978
  Ape:  APE0665
  Sce:  YOR095c
  Spo:  SPAC144.12
  Ecu:  ECU10g0180
  Dra:  DR0845
  Cac:  CAC1431
  Lla:  L0045
  Spy:  SPy0889
  Spn:  SP0828
  Sau:  SA2127
  Lin:  lin0974
  Syn:  slr0194
  Nos:  all0888
  Eco:  rpiA
  EcZ:  ZrpiA
  Ecs:  ECs3785
  Ype:  YPO0915 YPO1292
  Sty:  STM3063
  Buc:  BU411
  Vch:  VC2480
  Pae:  PA0330
  Hin:  HI0464
  Pmu:  PM1670
  Xfa:  XF2015
  Nme:  NMB1511
  NmA:  NMA1711
  Rso:  RSc1232
  Atu:  AGc2972
  Sme:  SMc00152
  Bme:  BMEI0974
  Mlo:  mll0526
  Ccr:  CC2303
  Ctr:  CT213
  Cpn:  CPn0141
  Tpa:  TP0616
  Bbu:  BB0657
_______

[R] COG0121 Predicted glutamine amidotransferase
  Mth:  MTH1465 MTH1466
  Mja:  MJ1515
  Tac:  Ta1463
  Pho:  PH0102
  Pab:  PAB1037 PAB2280
  Pya:  PAE3441 PAE3468
  Sso:  SSO0007 SSO1686 SSO2023
  Sce:  YNL191w
  Mtu:  Rv1061 Rv3702c
  MtC:  MT1091 MT3805
  Syn:  slr0199
  Nos:  all0327 alr2710
  Eco:  yafJ
  EcZ:  ZyafJ
  Ecs:  ECs0250
  Ype:  YPO3242
  Sty:  STM0311
  Vch:  VC2229 VCA0225
  Pae:  PA1307
  Hin:  HI1037
  Pmu:  PM0038
  Nme:  NMB1815
  NmA:  NMA0646
  Rso:  RSc0485
  Atu:  AGl1551
  Sme:  SMc01162
  Bme:  BMEI0355
  Mlo:  mlr5349
_______

[L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
  Afu:  AF2117
  Hbs:  VNG1266G VNG1311G
  Mac:  MA3207 MA3561
  Mth:  MTH1342
  Pho:  PH0784
  Pab:  PAB1530
  Ape:  APE0275
  Sce:  YER142c YML060w
  Spo:  SPAPB24D3.04c SPBC23G7.11
  Ecu:  ECU08g0770
  Dra:  DR2584
  Cac:  CAC2707
  Mtu:  Rv0142 Rv1317c_2
  MtC:  MT0150 MT1358_2
  Bsu:  BS_alkA BS_yfjP
  Bha:  BH1749
  Syn:  slr0231
  Eco:  alkA
  EcZ:  ZalkA
  Ecs:  ECs2877
  Ype:  YPO1834
  Sty:  STM2124
  Vch:  VCA1018_2
  Pae:  PA1686
  Xfa:  XF1326
  Rso:  RSc1168 RSc2505_2 RSc2569
  Atu:  AGl2478
  Sme:  SMc00736
  Bme:  BMEI0382
  Mlo:  mll3478
  Ccr:  CC2201
  Mpu:  MYPU_0950_1
_______

[BQ] COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein
  Afu:  AF0130 AF0690 AF1286 AF2290
  Hbs:  VNG0136G
  Mac:  MA2888
  Mth:  MTH1194
  Mja:  MJ0535
  Mka:  MK1055
  Pho:  PH1267
  Pab:  PAB0764
  Pya:  PAE0891 PAE2981
  Sso:  SSO0009 SSO0028 SSO1117
  Ape:  APE0092m APE1285
  Sce:  YGL194c YNL021w YNL330c YPL116w_1 YPR068c
  Spo:  SPAC3G9.07c SPBC36.05c SPBC800.03
  Ecu:  ECU03g1370 ECU09g0670
  Aae:  aq_1023 aq_2110
  Dra:  DR0833
  Sau:  SA1556
  Bsu:  BS_acuC
  Bha:  BH3237
  Syn:  slr0245
  Nos:  all0839 alr3350
  Vch:  VC2042
  Pae:  PA0321 PA1409 PA3774
  Nme:  NMB0605
  NmA:  NMA0810
  Rso:  RSc0919 RSc1606
  Atu:  AGc1358
  Sme:  SMc00969
  Bme:  BMEI1504
  Mlo:  mll0103 mll5679 mlr2893 mlr6968 mlr7469
  Ccr:  CC2072 CC3648
_______

[J] COG0124 Histidyl-tRNA synthetase
  Afu:  AF1642
  Hbs:  VNG2005G
  Mac:  MA0943
  Mth:  MTH244
  Mja:  MJ1000
  Mka:  MK1538
  Tac:  Ta0099
  Tvo:  TVN0154
  Pho:  PH0290
  Pab:  PAB1100
  Pya:  PAE1553
  Sso:  SSO0279
  Ape:  APE0662
  Sce:  YDR283c_2 YPR033c
  Spo:  SPBC2G2.12
  Ecu:  ECU06g0620
  Aae:  aq_122
  Tma:  TM1043 TM1090
  Fnu:  FN0298
  Dra:  DR1349
  Cac:  CAC2740
  Cgl:  Cgl1609
  Mtu:  Rv2580c
  MtC:  MT2657
  Mle:  ML0494
  Lla:  L0342
  Spy:  SPy2157
  Spn:  SP2121
  Sau:  SA1457
  Lin:  lin1555
  Bsu:  BS_hisS
  Bha:  BH1251
  Syn:  slr0357
  Nos:  all5012
  Eco:  hisS
  EcZ:  ZhisS
  Ecs:  ECs3376
  Ype:  YPO2878
  Sty:  STM2522
  Buc:  BU288
  Vch:  VC0760
  Pae:  PA3802
  Hin:  HI0369
  Pmu:  PM2011
  Xfa:  XF2222
  Nme:  NMB0854
  NmA:  NMA1065
  Rso:  RSc1216
  Hpy:  HP1190
  jHp:  jhp1115
  Cje:  Cj0765c
  Atu:  AGc1210
  Sme:  SMc00919
  Bme:  BMEII1056
  Mlo:  mlr6928
  Ccr:  CC3513
  Rpr:  RP308
  Rco:  RC0412
  Ctr:  CT543
  Cpn:  CPn0663
  Tpa:  TP0641
  Bbu:  BB0135
  Uur:  UU285
  Mpu:  MYPU_3330
  Mpn:  MPN045
  Mge:  MG035
_______

[F] COG0125 Thymidylate kinase
  Afu:  AF0061 AF1308
  Hbs:  VNG1929G
  Mac:  MA2176 MA4433
  Mth:  MTH1100 MTH1765
  Mja:  MJ0293
  Mka:  MK0101
  Tac:  Ta0081
  Tvo:  TVN0173
  Pho:  PH1695
  Pab:  PAB0319
  Pya:  PAE0964
  Sso:  SSO0780 SSO1191 SSO1192
  Ape:  APE2090
  Sce:  YJR057w
  Spo:  SPCC70.07c
  Ecu:  ECU04g1220
  Aae:  aq_969
  Tma:  TM1099
  Fnu:  FN1323
  Dra:  DR0111
  Cgl:  Cgl0730
  Mtu:  Rv3247c
  MtC:  MT3345
  Mle:  ML0772
  Lla:  L3846
  Spy:  SPy0399
  Spn:  SP0935
  Sau:  SA0440
  Lin:  lin2841
  Bsu:  BS_tmk
  Bha:  BH0042
  Syn:  slr0379
  Nos:  all4708
  Eco:  tmk
  EcZ:  Ztmk
  Ecs:  ECs1476
  Ype:  YPO1605
  Sty:  STM1200
  Buc:  BU353
  Vch:  VC2016
  Pae:  PA2962
  Hin:  HI0456
  Pmu:  PM1673
  Xfa:  XF0580
  Nme:  NMB0670
  NmA:  NMA0869
  Rso:  RSc1784
  Hpy:  HP1474
  jHp:  jhp1367
  Cje:  Cj0766c
  Atu:  AGc2760
  Sme:  SMc01189
  Bme:  BMEI0989
  Mlo:  mll0424
  Ccr:  CC1824
  Rpr:  RP684
  Rco:  RC1047
  Ctr:  CT188
  Cpn:  CPn0273
  Tpa:  TP0354
  Bbu:  BB0793
  Uur:  UU020
  Mpu:  MYPU_0520
  Mpn:  MPN006
  Mge:  MG006
_______

[G] COG0126 3-phosphoglycerate kinase
  Afu:  AF1146
  Hbs:  VNG1216G
  Mac:  MA2669 MA3592
  Mth:  MTH1042
  Mja:  MJ0641
  Mka:  MK1662
  Tac:  Ta1075
  Tvo:  TVN0530
  Pho:  PH1218
  Pab:  PAB1679
  Pya:  PAE1742
  Sso:  SSO0527
  Ape:  APE0173
  Sce:  YCR012w
  Spo:  SPBC14F5.04c
  Ecu:  ECU05g0320
  Aae:  aq_118
  Tma:  TM0689_1
  Fnu:  FN0654
  Dra:  DR1342
  Cac:  CAC0710
  Cgl:  Cgl1549
  Mtu:  Rv1437
  MtC:  MT1481
  Mle:  ML0571
  Lla:  L0010
  Spy:  SPy1881
  Spn:  SP0499
  Sau:  SA0728
  Lin:  lin2552
  Bsu:  BS_pgk
  Bha:  BH3559
  Syn:  slr0394
  Nos:  all4131
  Eco:  pgk
  EcZ:  Zpgk
  Ecs:  ECs3797
  Ype:  YPO0921
  Sty:  STM3069
  Buc:  BU450
  Vch:  VC0477
  Pae:  PA0552
  Hin:  HI0525
  Pmu:  PM1860
  Xfa:  XF0823
  Nme:  NMB0010
  NmA:  NMA0257
  Rso:  RSc0571
  Hpy:  HP1345
  jHp:  jhp1264
  Cje:  Cj1402c
  Atu:  AGl2193
  Sme:  SMc03981
  Bme:  BMEI0309
  Mlo:  mlr3753
  Ccr:  CC3249
  Ctr:  CT693
  Cpn:  CPn0679
  Tpa:  TP0538
  Bbu:  BB0056
  Uur:  UU279
  Mpu:  MYPU_2460_1
  Mpn:  MPN429
  Mge:  MG300
_______

[F] COG0127 Xanthosine triphosphate pyrophosphatase
  Afu:  AF2237
  Hbs:  VNG2043G
  Mac:  MA3706
  Mth:  MTH1424
  Mja:  MJ0226
  Mka:  MK1594
  Tac:  Ta0325
  Tvo:  TVN1277
  Pho:  PH1917
  Pab:  PAB1235
  Pya:  PAE2365
  Sso:  SSO0432
  Ape:  APE1138
  Sce:  YJR069c
  Spo:  SPCC830.10
  Ecu:  ECU04g1180 ECU05g0870
  Aae:  aq_202
  Tma:  TM0159
  Fnu:  FN1851_2
  Dra:  DR0179
  Cac:  CAC2665
  Cgl:  Cgl2450
  Mtu:  Rv1341
  MtC:  MT1382
  Mle:  ML1175
  Lla:  L111484
  Spy:  SPy0362
  Spn:  SP1880
  Sau:  SA0998
  Lin:  lin1202
  Bsu:  BS_ysnA
  Bha:  BH1160 BH3067
  Syn:  slr0402
  Nos:  all5088
  Eco:  yggV
  EcZ:  ZyggV
  Ecs:  ECs3830
  Ype:  YPO0945
  Sty:  STM3103
  Vch:  VC0456
  Pae:  PA0387
  Hin:  HI0260
  Pmu:  PM1666
  Xfa:  XF1506
  Nme:  NMB0639
  NmA:  NMA0849
  Rso:  RSc2160
  Cje:  Cj1374c
  Atu:  AGc570
  Sme:  SMc01146
  Bme:  BMEI1772
  Mlo:  mlr4626
  Ccr:  CC0146
  Ctr:  CT606
  Cpn:  CPn0775
  Tpa:  TP0438
  Bbu:  BB0247
_______

[E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase
  Afu:  AF1497
  Hbs:  VNG1232G
  Mac:  MA4544
  Mth:  MTH766
  Mja:  MJ0502
  Mka:  MK0628
  Tac:  Ta0282
  Tvo:  TVN1319
  Pab:  PAB0306
  Pya:  PAE1924
  Sso:  SSO0309
  Ape:  APE0569 APE1404
  Sce:  YDR127w_2
  Spo:  SPAC1834.02_2
  Aae:  aq_1536
  Tma:  TM0345
  Fnu:  FN0933
  Dra:  DR1096
  Cac:  CAC0895
  Cgl:  Cgl0740
  Mtu:  Rv3227
  MtC:  MT3324
  Mle:  ML0792
  Lla:  L0057
  Spy:  SPy1352
  Spn:  SP1371
  Sau:  SA1297
  Lin:  lin2037
  Bsu:  BS_aroE
  Bha:  BH1667 BH2713
  Syn:  slr0444
  Nos:  all5019
  Eco:  aroA
  EcZ:  ZaroA
  Ecs:  ECs0991
  Ype:  YPO1390
  Sty:  STM0978
  Buc:  BU311
  Vch:  VC1732
  Pae:  PA3164_2
  Hin:  HI1589
  Pmu:  PM0839
  Xfa:  XF2324
  Nme:  NMB1432
  NmA:  NMA1644
  Rso:  RSc0907
  Hpy:  HP0401
  jHp:  jhp0980
  Cje:  Cj0895c
  Atu:  AGc1140
  Sme:  SMc00333
  Bme:  BMEI1917
  Mlo:  mll5213
  Ccr:  CC3589
  Ctr:  CT366
  Cpn:  CPn1039
_______

[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase
  Afu:  AF1014
  Mac:  MA1802 MA3373
  Mth:  MTH1449
  Mja:  MJ1276
  Mka:  MK1197
  Pab:  PAB0895
  Pya:  PAE0615
  Sso:  SSO3107
  Ape:  APE0013
  Sce:  YJR016c
  Spo:  SPAC17G8.06c
  Aae:  aq_837
  Tma:  TM0551
  Dra:  DR1132
  Cac:  CAC3170 CAC3604
  Cgl:  Cgl1238
  Mtu:  Rv0189c
  MtC:  MT0199
  Mle:  ML2608
  Lla:  L0077
  Spn:  SP2126
  Sau:  SA1858
  Lin:  lin2090
  Bsu:  BS_ilvD
  Bha:  BH3062
  Syn:  slr0452
  Nos:  alr2771
  Eco:  edd ilvD yagF yjhG
  EcZ:  Zedd ZilvD
  Ecs:  ECs2561 ECs4705
  Ype:  YPO2533 YPO3897
  Sty:  STM1885 STM3531 STM3904
  Buc:  BU600
  Vch:  VC0028 VC0288
  Pae:  PA0353 PA3194
  Hin:  HI0738
  Pmu:  PM1625
  Xfa:  XF0099 XF1062
  Nme:  NMB1150 NMB1188 NMB1393
  NmA:  NMA1361 NMA1610
  Rso:  RSc2412 RSp1560
  Hpy:  HP1100
  jHp:  jhp1026
  Cje:  Cj0013
  Atu:  AGc1060 AGc3510 AGc4959 AGl1769 AGl3190
  Sme:  SMa0235 SMb20115 SMb20890 SMc00884 SMc03068 SMc04045 SMc04144
  Bme:  BMEI1848 BMEII0356 BMEII0511
  Mlo:  mll1102 mll6512 mll7192 mlr5361 mlr5404
  Ccr:  CC0819 CC1421 CC2055 CC3044
_______

[J] COG0130 Pseudouridine synthase
  Afu:  AF0238
  Hbs:  VNG1729G
  Mac:  MA1105
  Mth:  MTH32
  Mja:  MJ0148
  Mka:  MK0133
  Tac:  Ta1244
  Tvo:  TVN0352
  Pho:  PH1644
  Pab:  PAB0356
  Pya:  PAE0865
  Sso:  SSO0393 SSO5761
  Ape:  APE0989 APE0990
  Sce:  YLR175w YNL292w
  Spo:  SPAC29A4.04c SPBC11C11.10
  Ecu:  ECU05g1020
  Aae:  aq_705
  Tma:  TM0856
  Fnu:  FN0635
  Dra:  DR1323
  Cac:  CAC1805
  Cgl:  Cgl1933
  Mtu:  Rv2793c
  MtC:  MT2862.1
  Mle:  ML1546
  Lla:  L0328
  Spy:  SPy1251
  Spn:  SP1212
  Sau:  SA1114
  Lin:  lin1365
  Bsu:  BS_truB
  Bha:  BH2410
  Syn:  slr0457
  Nos:  alr1543
  Eco:  truB
  EcZ:  ZtruB
  Ecs:  ECs4047
  Ype:  YPO3494
  Sty:  STM3284
  Buc:  BU375
  Vch:  VC0645
  Pae:  PA4742
  Hin:  HI1289
  Pmu:  PM0756
  Xfa:  XF0237
  Nme:  NMB1374
  NmA:  NMA1588
  Rso:  RSc1291
  Cje:  Cj1102
  Atu:  AGc127
  Sme:  SMc00321
  Bme:  BMEI1963
  Mlo:  mlr5558
  Ccr:  CC0036
  Rpr:  RP501 RP502
  Rco:  RC0665
  Ctr:  CT094
  Cpn:  CPn0319
  Tpa:  TP0889
  Bbu:  BB0803
  Uur:  UU354
  Mpu:  MYPU_5500
_______

[E] COG0131 Imidazoleglycerol-phosphate dehydratase
  Afu:  AF0985
  Hbs:  VNG2295G
  Mac:  MA0219
  Mth:  MTH1467
  Mja:  MJ0698
  Mka:  MK0855
  Pya:  PAE0990
  Sso:  SSO0596
  Sce:  YOR202w
  Spo:  SPBC21H7.07c
  Aae:  aq_039
  Tma:  TM1039
  Dra:  DR0424
  Cac:  CAC0938
  Cgl:  Cgl2047
  Mtu:  Rv1601
  MtC:  MT1637
  Mle:  ML1259
  Lla:  L0068
  Sau:  SA2468
  Lin:  lin0575
  Bsu:  BS_hisB
  Bha:  BH3581
  Syn:  slr0500
  Nos:  all4390
  Eco:  hisB_2
  EcZ:  ZhisB_2
  Ecs:  ECs2823_2
  Ype:  YPO1546_2
  Sty:  STM2074_2
  Buc:  BU102_2
  Vch:  VC1135_2
  Pae:  PA5143
  Hin:  HI0471_2
  Pmu:  PM1200_2
  Xfa:  XF2217_2
  Nme:  NMB1583
  NmA:  NMA1772
  Rso:  RSc2950
  Cje:  Cj1599_2
  Atu:  AGc69
  Sme:  SMc02574
  Bme:  BMEI2045
  Mlo:  mlr5008
  Ccr:  CC3734
_______

[H] COG0132 Dethiobiotin synthetase
  Mja:  MJ1299
  Sce:  YNR057c
  Aae:  aq_557
  Fnu:  FN1001
  Cac:  CAC1361
  Cgl:  Cgl2554
  Mtu:  Rv1570
  MtC:  MT1621
  Mle:  ML1218
  Sau:  SA2215
  Bsu:  BS_bioD
  Bha:  BH0783
  Syn:  slr0523
  Nos:  all4667
  Eco:  bioD ynfK
  EcZ:  Z2585 ZbioD
  Ecs:  ECs0856 ECs2299
  Ype:  YPO1154 YPO2269
  Sty:  STM0797 STM1489
  Buc:  BU290
  Vch:  VC1115
  Pae:  PA0504
  Hin:  HI1445 HI1550
  Pmu:  PM0641 PM1904
  Xfa:  XF2477
  Nme:  NMB0733
  NmA:  NMA0943
  Rso:  RSc1479
  Hpy:  HP0029
  jHp:  jhp0025
  Cje:  Cj0308c
  Atu:  AGl1705
  Bme:  BMEII0777
  Mlo:  mll5829 mll6005 mll6270 mll9098
  Ccr:  CC1575
  Cpn:  CPn1042
_______

[E] COG0133 Tryptophan synthase beta chain
  Afu:  AF1600
  Hbs:  VNG0307G
  Mac:  MA2991
  Mth:  MTH1659
  Mja:  MJ1037
  Mka:  MK0784
  Pab:  PAB2048
  Sce:  YGL026c_2
  Spo:  SPAC19A8.15_2
  Aae:  aq_706
  Tma:  TM0138
  Fnu:  FN0317
  Dra:  DR0941
  Cac:  CAC3158
  Cgl:  Cgl2975
  Mtu:  Rv1612
  MtC:  MT1647
  Mle:  ML1272
  Lla:  L0049
  Spn:  SP1812
  Sau:  SA1204
  Lin:  lin1669
  Bsu:  BS_trpB
  Bha:  BH1663
  Syn:  slr0543
  Nos:  all0410 all3794
  Eco:  trpB
  EcZ:  ZtrpB
  Ecs:  ECs1833
  Ype:  YPO2204
  Sty:  STM1726
  Buc:  BU278
  Vch:  VC1170
  Pae:  PA0036
  Hin:  HI1431
  Pmu:  PM0578
  Xfa:  XF1375
  Nme:  NMB0699
  NmA:  NMA0904
  Rso:  RSc1983
  Hpy:  HP1278
  jHp:  jhp1199
  Cje:  Cj0348
  Atu:  AGc28
  Sme:  SMc02766
  Bme:  BMEI2018
  Mlo:  mlr5071
  Ccr:  CC3544
  Ctr:  CT170
_______

[E] COG0134 Indole-3-glycerol phosphate synthase
  Afu:  AF1604_1
  Hbs:  VNG0305G
  Mac:  MA2992
  Mth:  MTH1657
  Mja:  MJ0918
  Mka:  MK1391
  Tac:  Ta0808
  Tvo:  TVN1022
  Pab:  PAB2043
  Pya:  PAE0570
  Sso:  SSO0895
  Ape:  APE2546
  Sce:  YKL211c_2
  Spo:  SPBC1539.09c_2
  Aae:  aq_1787
  Tma:  TM0140
  Dra:  DR1426
  Cac:  CAC3160
  Cgl:  Cgl2038 Cgl2974_1
  Mtu:  Rv1611
  MtC:  MT1646
  Mle:  ML1271
  Lla:  L0051
  Spn:  SP1814
  Sau:  SA1202
  Lin:  lin1671
  Bsu:  BS_trpC
  Bha:  BH1661
  Syn:  slr0546
  Nos:  all0413 alr3235 alr4746
  Eco:  trpC_1
  EcZ:  ZtrpC_1
  Ecs:  ECs1834_1
  Ype:  YPO2205_1
  Sty:  STM1725_1
  Buc:  BU279_1
  Vch:  VC1171_1
  Pae:  PA0651
  Hin:  HI1389.1_1
  Pmu:  PM0580_1
  Xfa:  XF0213
  Nme:  NMB0275
  NmA:  NMA2212
  Rso:  RSc2885 RSp0680
  Hpy:  HP1279_1
  jHp:  jhp1200_1
  Cje:  Cj0498
  Atu:  AGc3101
  Sme:  SMc00236
  Bme:  BMEI0843
  Mlo:  mlr0615
  Ccr:  CC1899
_______

[E] COG0135 Phosphoribosylanthranilate isomerase
  Afu:  AF1601
  Hbs:  VNG1648G
  Mac:  MA2988
  Mth:  MTH1658
  Mja:  MJ0451
  Mka:  MK0508
  Tac:  Ta0805m
  Tvo:  TVN1025
  Pab:  PAB2047
  Pya:  PAE2499
  Sso:  SSO0892
  Ape:  APE2547
  Sce:  YDR007w
  Spo:  SPBC1539.09c_3
  Aae:  aq_2076
  Tma:  TM0139
  Dra:  DR0123
  Cac:  CAC3159
  Cgl:  Cgl2974_2
  Lla:  L0050_1
  Spn:  SP1813
  Sau:  SA1203
  Lin:  lin1670
  Bsu:  BS_trpF
  Bha:  BH1662
  Syn:  sll0356
  Nos:  all5288
  Eco:  trpC_2
  EcZ:  ZtrpC_2
  Ecs:  ECs1834_2
  Ype:  YPO2205_2
  Sty:  STM1725_2
  Buc:  BU279_2
  Vch:  VC1171_2
  Pae:  PA3113
  Hin:  HI1389.1_2
  Pmu:  PM0580_2
  Xfa:  XF1374
  Nme:  NMB0688
  NmA:  NMA0890
  Rso:  RSc1984
  Hpy:  HP1279_2
  jHp:  jhp1200_2
  Cje:  Cj0347
  Atu:  AGc26
  Sme:  SMc02767
  Bme:  BMEI2017
  Mlo:  mlr5070
  Ccr:  CC3545
  Ctr:  CT327
_______

[E] COG0136 Aspartate-semialdehyde dehydrogenase
  Afu:  AF1506
  Hbs:  VNG1435G
  Mac:  MA0430
  Mth:  MTH799
  Mja:  MJ0205
  Mka:  MK1389
  Tac:  Ta0363
  Pho:  PH1088
  Pab:  PAB1678
  Pya:  PAE2876
  Sso:  SSO0874 SSO2178
  Ape:  APE1143
  Sce:  YDR158w
  Spo:  SPCC1827.06c
  Aae:  aq_1866
  Tma:  TM1523
  Dra:  DR2008
  Cac:  CAC0022 CAC0568
  Cgl:  Cgl0253
  Mtu:  Rv3708c
  MtC:  MT3811
  Mle:  ML2322
  Lla:  L66199
  Spn:  SP1013
  Sau:  SA1226
  Lin:  lin1476
  Bsu:  BS_asd
  Bha:  BH2401
  Syn:  slr0549
  Nos:  all3680
  Eco:  asd usg
  EcZ:  Zasd Zusg
  Ecs:  ECs3203 ECs4278
  Ype:  YPO2765 YPO3949
  Sty:  STM2369 STM3539
  Buc:  BU448
  Vch:  VC2036 VC2107
  Pae:  PA3116 PA3117
  Hin:  HI0646 HI1433
  Pmu:  PM0486 PM1632
  Xfa:  XF1371
  Nme:  NMB2079
  NmA:  NMA0351
  Rso:  RSc1987
  Hpy:  HP1189
  jHp:  jhp1114
  Cje:  Cj1023c
  Atu:  AGc4523
  Sme:  SMc04410
  Bme:  BMEII0407
  Mlo:  mll4392
  Ccr:  CC0253 CC3485
  Rpr:  RP316
  Rco:  RC0430
  Ctr:  CT363
  Cpn:  CPn1048
_______

[E] COG0137 Argininosuccinate synthase
  Afu:  AF2252
  Hbs:  VNG2437G
  Mac:  MA2142
  Mth:  MTH1254
  Mja:  MJ0429
  Mka:  MK0942
  Tac:  Ta0650
  Tvo:  TVN0927
  Pya:  PAE2884
  Sso:  SSO0638
  Sce:  YOL058w
  Spo:  SPBC428.05c
  Aae:  aq_1140
  Tma:  TM1780
  Dra:  DR0674
  Cac:  CAC0973
  Cgl:  Cgl1367
  Mtu:  Rv1658
  MtC:  MT1696
  Mle:  ML1412
  Lla:  L126739
  Sau:  SA0822
  Lin:  lin2195
  Bsu:  BS_argG
  Bha:  BH3187
  Syn:  slr0585
  Nos:  alr4798
  Eco:  argG
  EcZ:  ZargG
  Ecs:  ECs4052
  Ype:  YPO1570
  Sty:  STM3290
  Buc:  BU050
  Vch:  VC2642
  Pae:  PA3525
  Hin:  HI1727
  Pmu:  PM0813
  Xfa:  XF0999
  Nme:  NMB2129
  NmA:  NMA0303
  Rso:  RSc2553
  Cje:  Cj0665c
  Atu:  AGc4836
  Sme:  SMc03826
  Bme:  BMEI1870
  Mlo:  mlr4366
  Ccr:  CC0129
_______

[F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
  Afu:  AF1811
  Hbs:  VNG0414G_2
  Mac:  MA4012
  Tac:  Ta0060
  Tvo:  TVN0016
  Sce:  YLR028c YMR120c
  Spo:  SPCPB16A4.03c
  Aae:  aq_1963
  Tma:  TM1249
  Fnu:  FN0982
  Dra:  DR0868
  Cac:  CAC1395 CAC2445
  Cgl:  Cgl0838
  Mtu:  Rv0957
  MtC:  MT0984
  Mle:  ML0161
  Lla:  L158710
  Spn:  SP0050
  Sau:  SA0925
  Lin:  lin1877
  Bsu:  BS_purH
  Bha:  BH0633
  Syn:  slr0597
  Nos:  all3093
  Eco:  purH
  EcZ:  ZpurH
  Ecs:  ECs4929
  Ype:  YPO3728
  Sty:  STM4176
  Buc:  BU031
  Vch:  VC0276
  Pae:  PA4854
  Hin:  HI0887
  Pmu:  PM0222
  Xfa:  XF1975
  Nme:  NMB0983
  NmA:  NMA1182
  Rso:  RSc0504
  Cje:  Cj0953c
  Atu:  AGc5117
  Sme:  SMc04088
  Bme:  BMEI0233
  Mlo:  mlr4101
  Ccr:  CC0086
_______

[E] COG0139 Phosphoribosyl-AMP cyclohydrolase
  Afu:  AF1950
  Hbs:  VNG2284G
  Mac:  MA0908
  Mth:  MTH245
  Mja:  MJ1430
  Mka:  MK1537
  Pya:  PAE0957
  Sso:  SSO6227
  Sce:  YCL030c_1
  Spo:  SPBC29A3.02c_1
  Aae:  aq_1968_1
  Tma:  TM1035_1
  Dra:  DR0733_1
  Cac:  CAC0942
  Cgl:  Cgl2040
  Mtu:  Rv1606
  MtC:  MT1641.1
  Mle:  ML1264
  Lla:  L0072_1
  Sau:  SA2464_1
  Lin:  lin0571
  Bsu:  BS_hisI_1
  Bha:  BH3577_1
  Syn:  slr0608_1
  Nos:  all3263_1
  Eco:  hisI_1
  EcZ:  ZhisI_1
  Ecs:  ECs2827_1
  Ype:  YPO1542_1
  Sty:  STM2078_1
  Buc:  BU106_1
  Vch:  VC1139_1
  Pae:  PA5066
  Hin:  HI0475_1
  Pmu:  PM1206_1
  Xfa:  XF2213_1
  Nme:  NMB0627
  NmA:  NMA0837
  Rso:  RSc2945
  Cje:  Cj1604_1
  Atu:  AGc3213
  Sme:  SMc01004
  Bme:  BMEI0909
  Mlo:  mlr0923
  Ccr:  CC0457
_______

[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase
  Hbs:  VNG2596G
  Mac:  MA1392
  Mth:  MTH1283
  Mja:  MJ0302
  Mka:  MK0500
  Pya:  PAE0986
  Sso:  SSO6223
  Sce:  YCL030c_2
  Spo:  SPBC29A3.02c_2
  Aae:  aq_1968_2
  Tma:  TM1035_2
  Dra:  DR0733_2
  Cac:  CAC0943
  Cgl:  Cgl1469
  Mtu:  Rv2122c
  MtC:  MT2182
  Mle:  ML1309
  Lla:  L0072_2
  Sau:  SA2464_2
  Lin:  lin0570
  Bsu:  BS_hisI_2
  Bha:  BH3577_2
  Syn:  slr0608_2
  Nos:  all3263_2
  Eco:  hisI_2
  EcZ:  ZhisI_2
  Ecs:  ECs2827_2
  Ype:  YPO1542_2
  Sty:  STM2078_2
  Buc:  BU106_2
  Vch:  VC1139_2
  Pae:  PA5067
  Hin:  HI0475_2
  Pmu:  PM1206_2
  Xfa:  XF2213_2
  Nme:  NMB0603
  NmA:  NMA0807
  Rso:  RSc2944
  Cje:  Cj1604_2
  Atu:  AGc60
  Sme:  SMc02568
  Bme:  BMEI2040
  Mlo:  mlr5018
  Ccr:  CC3738
_______

[E] COG0141 Histidinol dehydrogenase
  Afu:  AF0212
  Hbs:  VNG1444G
  Mac:  MA3201
  Mth:  MTH225
  Mja:  MJ1456
  Mka:  MK0711
  Pya:  PAE0988
  Sso:  SSO0599
  Sce:  YCL030c_3
  Spo:  SPBC1711.13
  Aae:  aq_782
  Tma:  TM1041
  Dra:  DR2140
  Cac:  CAC0937
  Cgl:  Cgl2049
  Mtu:  Rv1599
  MtC:  MT1635
  Mle:  ML1257
  Lla:  L0067
  Sau:  SA2470
  Lin:  lin0576
  Bsu:  BS_hisD
  Bha:  BH3582
  Syn:  slr0682 slr1848
  Nos:  all1591 alr3056
  Eco:  hisD
  EcZ:  ZhisD
  Ecs:  ECs2821
  Ype:  YPO1548
  Sty:  STM2072
  Buc:  BU100
  Vch:  VC1133
  Pae:  PA4448
  Hin:  HI0469
  Pmu:  PM1198
  Xfa:  XF2219
  Nme:  NMB1581
  NmA:  NMA1770
  Rso:  RSc2952
  Cje:  Cj1598
  Atu:  AGc948
  Sme:  SMa0398 SMc02307
  Bme:  BMEI1668
  Mlo:  mll6456 mlr6649 mlr7107
  Ccr:  CC2346
_______

[H] COG0142 Geranylgeranyl pyrophosphate synthase
  Afu:  AF1551 AF2286
  Hbs:  VNG1150G VNG2153G
  Mac:  MA0606 MA4150
  Mth:  MTH50
  Mja:  MJ0860
  Mka:  MK0774
  Tac:  Ta0436 Ta1313
  Tvo:  TVN0262 TVN1057
  Pho:  PH1072
  Pab:  PAB2389
  Pya:  PAE1013 PAE3294
  Sso:  SSO0061 SSO2345
  Ape:  APE1764
  Sce:  YBR003w YJL167w YPL069c
  Spo:  SPAC19G12.12 SPAC6F12.13c SPBC36.06c SPBPJ4664.01
  Ecu:  ECU11g1810
  Aae:  aq_748 aq_895
  Tma:  TM0161 TM1535
  Fnu:  FN1327 FN1541
  Dra:  DR0932 DR1395
  Cac:  CAC2080
  Cgl:  Cgl0466 Cgl0609 Cgl2124
  Mtu:  Rv0562 Rv0989c Rv2173 Rv3383c Rv3398c
  MtC:  MT0588 MT1018 MT2229 MT3491 MT3506
  Mle:  ML2277
  Lla:  L179531 L186258 L80459
  Spy:  SPy1498
  Spn:  SP1205
  Sau:  SA1302 SA1352
  Lin:  lin1400 lin2044 lin2790
  Bsu:  BS_comQ BS_gerCC BS_yqiD
  Bha:  BH1653 BH2781
  Syn:  slr0611 slr0739
  Nos:  alr0096 alr0213
  Eco:  ispA ispB
  EcZ:  ZispA ZispB
  Ecs:  ECs0475 ECs4066
  Ype:  YPO3176 YPO3513
  Sty:  STM0423 STM3305
  Buc:  BU465
  Vch:  VC0434 VC0890
  Pae:  PA4043 PA4569
  Hin:  HI0881 HI1438
  Pmu:  PM0346 PM0533
  Xfa:  XF0661 XF1391
  Nme:  NMB0261 NMB0326
  NmA:  NMA2161 NMA2226
  Rso:  RSc2222 RSc2823
  Hpy:  HP0240 HP0929
  jHp:  jhp0225 jhp0864
  Cje:  Cj0541 Cj1644
  Atu:  AGc1125 AGc4933
  Sme:  SMc00860 SMc03884
  Bme:  BMEI0270 BMEI1532
  Mlo:  mlr3784 mlr6368 mlr7426
  Ccr:  CC2069 CC2113
  Rpr:  RP479
  Rco:  RC0724
  Ctr:  CT628
  Cpn:  CPn0748
  Tpa:  TP0683
  Bbu:  BB0314
_______

[J] COG0143 Methionyl-tRNA synthetase
  Afu:  AF1453_1
  Hbs:  VNG0326G_1
  Mac:  MA4046_1
  Mth:  MTH587_1
  Mja:  MJ1263_1
  Mka:  MK0850_1
  Tac:  Ta1162
  Tvo:  TVN1220
  Pho:  PH0993_1
  Pab:  PAB2364_1
  Pya:  PAE2940
  Sso:  SSO0558
  Ape:  APE1129
  Sce:  YGR171c YGR264c
  Spo:  SPAC27E2.06c SPBC17A3.04c
  Ecu:  ECU11g0890
  Aae:  aq_1257
  Tma:  TM1085_1
  Fnu:  FN1268_1
  Dra:  DR1433_1
  Cac:  CAC2991_1
  Cgl:  Cgl0868
  Mtu:  Rv1007c
  MtC:  MT1036
  Mle:  ML0238
  Lla:  L0353_1
  Spy:  SPy0422_1
  Spn:  SP0788_1
  Sau:  SA0448_1
  Lin:  lin0216_1
  Bsu:  BS_metS_1
  Bha:  BH0053_1
  Syn:  slr0649
  Nos:  all0233
  Eco:  metG_1
  EcZ:  ZmetG_1
  Ecs:  ECs2920_1
  Ype:  YPO1522_1
  Sty:  STM2155_1
  Buc:  BU109
  Vch:  VC1036_1
  Pae:  PA3482_1
  Hin:  HI1276_1
  Pmu:  PM0303_1
  Xfa:  XF0549_1
  Nme:  NMB0030_1
  NmA:  NMA0275_1
  Rso:  RSc1818 RSc2381_1 RSp1438
  Hpy:  HP0417_1
  jHp:  jhp0967_1
  Cje:  Cj0838c_1
  Atu:  AGc2757
  Sme:  SMc01192
  Bme:  BMEI0987
  Mlo:  mll0419 mlr5926
  Ccr:  CC1480
  Rpr:  RP683
  Rco:  RC1046
  Ctr:  CT032
  Cpn:  CPn0122
  Tpa:  TP0798_1
  Bbu:  BB0587_1
  Uur:  UU197
  Mpu:  MYPU_4900
  Mpn:  MPN023
  Mge:  MG021
_______

[J] COG0144 tRNA and rRNA cytosine-C5-methylases
  Afu:  AF0853 AF2039 AF2324
  Hbs:  VNG0499G
  Mja:  MJ0026
  Mka:  MK0043 MK0170 MK0295 MK0370 MK0444 MK0673 MK0769
        MK1539 MK1575 MK1630
  Pho:  PH0851 PH1078 PH1374 PH1537 PH1991
  Pab:  PAB0523 PAB0830 PAB1173 PAB1947 PAB2390
  Pya:  PAE0743 PAE3578
  Sso:  SSO0122 SSO0252 SSO0371
  Ape:  APE0514 APE1098 APE2465
  Sce:  YBL024w YNL022c YNL061w_2
  Spo:  SPAC17D4.04 SPAC23C4.17 SPAC2C4.06c SPBP8B7.20c
  Ecu:  ECU01g1080 ECU07g0320 ECU08g0400
  Tma:  TM1512
  Fnu:  FN0313
  Dra:  DR2168
  Cac:  CAC1725
  Cgl:  Cgl1561
  Mtu:  Rv1407
  MtC:  MT1451
  Lla:  L141260
  Spy:  SPy1246_1 SPy1627
  Spn:  SP1402_1 SP1734
  Sau:  SA1060
  Lin:  lin1936
  Bsu:  BS_yloM
  Bha:  BH2507
  Syn:  slr0679
  Nos:  alr0820 alr1008
  Eco:  sun yebU_1
  EcZ:  Zsun ZyebU_1
  Ecs:  ECs2545_1 ECs4154
  Ype:  YPO0240
  Sty:  STM1850_1 STM3408
  Vch:  VC0044 VC1502_1
  Pae:  PA0017
  Hin:  HI0624
  Pmu:  PM1561
  Xfa:  XF0928
  Nme:  NMB0112 NMB1351
  NmA:  NMA0162 NMA1563
  Rso:  RSc0075 RSc2453
  Cje:  Cj0636
  Atu:  AGc495 AGc5121
  Sme:  SMc00403 SMc04090
  Bme:  BMEI0235 BMEII0890
  Mlo:  mlr4098 mlr6944
  Ccr:  CC0102 CC1619
  Ctr:  CT553
  Cpn:  CPn0674
_______

[EQ] COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit
  Afu:  AF0906
  Mac:  MA0858 MA2300_1 MA2889 MA3497 MA3498 MA4203 MA4395
        MA4396 MA4562 MA4563
  Mja:  MJ0964
  Mka:  MK1091 MK1093
  Tvo:  TVN0812
  Pya:  PAE2030
  Sso:  SSO1663 SSO1668 SSO2008 SSO2936
  Ape:  APE1328 APE2528
  Sce:  YKL215c_1
  Spo:  SPAC11D3.14c_1 SPAC11D3.15_1
  Aae:  aq_708
  Mtu:  Rv0266c_1
  Lin:  lin0475
  Bha:  BH1881 BH1884
  Syn:  slr0697_1
  Nos:  all4970
  Hpy:  HP0695
  jHp:  jhp0633
  Atu:  AGl3521 AGl3530 AGpT62
  Sme:  SMb20023_1 SMb20406 SMc02580
  Bme:  BMEII0602_1
  Mlo:  mll9131 mlr1573_1 mlr4662 mlr4786 mlr5245 mlr7024 mlr9030
  Ccr:  CC2369_1
_______

[EQ] COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit
  Mac:  MA2300_2
  Mja:  MJ0963
  Mka:  MK1048
  Tvo:  TVN0811
  Pya:  PAE2028
  Sso:  SSO1662 SSO2010 SSO2934
  Ape:  APE1331 APE2530
  Sce:  YKL215c_2
  Spo:  SPAC11D3.14c_2 SPAC11D3.15_2
  Aae:  aq_1925
  Mtu:  Rv0266c_2
  Syn:  slr0697_2
  Nos:  all4969
  Hpy:  HP0696
  jHp:  jhp0632
  Atu:  AGpT63
  Sme:  SMb20023_2 SMb20407
  Bme:  BMEII0602_2
  Mlo:  mlr1573_2 mlr4788 mlr5246 mlr7025 mlr9031
  Ccr:  CC2369_2
_______

[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I
  Afu:  AF1603
  Hbs:  VNG0384G VNG1647G
  Mac:  MA2987
  Mth:  MTH1655
  Mja:  MJ1075
  Mka:  MK0437
  Tac:  Ta0806m
  Tvo:  TVN1024
  Pab:  PAB2045
  Pya:  PAE2460
  Sso:  SSO0893
  Ape:  APE2553
  Sce:  YER090w YNR033w_2
  Spo:  SPBP8B7.29_2 SPCC1442.09
  Aae:  aq_1144 aq_582
  Tma:  TM0142
  Fnu:  FN1730
  Dra:  DR0196_1 DR1791
  Cac:  CAC3163
  Cgl:  Cgl0970_2 Cgl2971
  Mtu:  Rv1005c Rv1609 Rv2386c
  MtC:  MT1034 MT1644 MT2454
  Mle:  ML0236 ML1269
  Lla:  L0054 L0179_1
  Spy:  SPy1990_1
  Spn:  SP0665_1 SP1817
  Sau:  SA0669 SA1199
  Lin:  lin1674 lin2893_1
  Bsu:  BS_pabB BS_trpE
  Bha:  BH0090 BH1659
  Syn:  slr0738 slr1979
  Nos:  all0328 all0414_1 alr3233_1 alr3443_2
  Eco:  pabB trpE
  EcZ:  ZpabB ZtrpEm
  Ecs:  ECs1836 ECs2521
  Ype:  YPO1773 YPO1916 YPO1976 YPO2208
  Sty:  STM1723 STM1824
  Buc:  BUpT01
  Vch:  VC1174 VC1303
  Pae:  PA0609 PA1001 PA1758 PA1903_1 PA4214_1
  Hin:  HI1170 HI1387
  Pmu:  PM0584 PM1464
  Xfa:  XF0210 XF0674 XF1914
  Nme:  NMB1021 NMB1970_1
  NmA:  NMA0477_1 NMA1247
  Rso:  RSc2633_1 RSc2881
  Hpy:  HP0293_1 HP1282
  jHp:  jhp0278_1 jhp1203
  Cje:  Cj0345 Cj0862c_1
  Atu:  AGc3082 AGc4162_1
  Sme:  SMc02725_1 SMc04013
  Bme:  BMEI0449_1 BMEII0013
  Mlo:  mlr2774_1 mlr3005
  Ccr:  CC1895 CC2953
_______

[G] COG0148 Enolase
  Afu:  AF1132
  Hbs:  VNG1142G
  Mac:  MA1672
  Mth:  MTH43
  Mja:  MJ0198 MJ0232
  Mka:  MK1647
  Tac:  Ta0882
  Tvo:  TVN0981
  Pho:  PH1630 PH1942
  Pab:  PAB0367 PAB1126
  Pya:  PAE0812
  Sso:  SSO0913
  Ape:  APE2458
  Sce:  YGR254w YHR174w YMR323w YOR393w YPL281c
  Spo:  SPBC1815.01
  Ecu:  ECU10g1690
  Aae:  aq_484
  Tma:  TM0877
  Fnu:  FN1764
  Dra:  DR2637
  Cac:  CAC0713
  Cgl:  Cgl0949
  Mtu:  Rv1023
  MtC:  MT1051
  Mle:  ML0255
  Lla:  L0007 L0008
  Spy:  SPy0731
  Spn:  SP1128
  Sau:  SA0731
  Lin:  lin2549
  Bsu:  BS_eno
  Bha:  BH3556
  Syn:  slr0752
  Nos:  all3538
  Eco:  eno
  EcZ:  Zeno
  Ecs:  ECs3639
  Ype:  YPO3376
  Sty:  STM2952
  Buc:  BU417
  Vch:  VC2447
  Pae:  PA3635
  Hin:  HI0932
  Pmu:  PM1871
  Xfa:  XF1291
  Nme:  NMB1285
  NmA:  NMA1495
  Rso:  RSc1129
  Hpy:  HP0154
  jHp:  jhp0142
  Cje:  Cj1672c
  Atu:  AGc2631
  Sme:  SMc01028
  Bme:  BMEI0851
  Mlo:  mlr0378
  Ccr:  CC1724
  Ctr:  CT587
  Cpn:  CPn0800
  Tpa:  TP0817
  Bbu:  BB0337
  Uur:  UU184
  Mpu:  MYPU_5180
  Mpn:  MPN606
  Mge:  MG407
_______

[G] COG0149 Triosephosphate isomerase
  Afu:  AF1304
  Hbs:  VNG1027G
  Mac:  MA4607
  Mth:  MTH1041
  Mja:  MJ1528
  Mka:  MK1664
  Tac:  Ta0313
  Tvo:  TVN1287
  Pho:  PH1884
  Pab:  PAB1208
  Pya:  PAE1501
  Sso:  SSO2592
  Ape:  APE1538
  Sce:  YDR050c
  Spo:  SPCC24B10.21
  Ecu:  ECU11g0230
  Aae:  aq_360
  Tma:  TM0689_2
  Fnu:  FN1366
  Dra:  DR1339
  Cac:  CAC0711
  Cgl:  Cgl1548
  Mtu:  Rv1438
  MtC:  MT1482
  Mle:  ML0572
  Lla:  L0006
  Spy:  SPy0613
  Spn:  SP1574
  Sau:  SA0729
  Lin:  lin0364 lin2551
  Bsu:  BS_tpi
  Bha:  BH3558
  Syn:  slr0783
  Nos:  alr4385
  Eco:  tpiA
  EcZ:  ZtpiA
  Ecs:  ECs4844
  Ype:  YPO0085
  Sty:  STM4081
  Buc:  BU307
  Vch:  VC2670
  Pae:  PA4748
  Hin:  HI0678
  Pmu:  PM1311 PM1640_1
  Xfa:  XF0303
  Nme:  NMB1887
  NmA:  NMA0570
  Rso:  RSc2064
  Hpy:  HP0194
  jHp:  jhp0180
  Cje:  Cj1401c
  Atu:  AGc2987
  Sme:  SMc01023 SMc01614
  Bme:  BMEI0846 BMEII0425
  Mlo:  mll0610 mlr7275
  Ccr:  CC1893
  Ctr:  CT328
  Cpn:  CPn1063
  Tpa:  TP0537
  Bbu:  BB0055
  Uur:  UU181
  Mpu:  MYPU_4580
  Mpn:  MPN629
  Mge:  MG431
_______

[F] COG0150 Phosphoribosylaminoimidazole (AIR) synthetase
  Afu:  AF1693
  Hbs:  VNG0876G
  Mac:  MA0130
  Mth:  MTH1204
  Mja:  MJ0203
  Mka:  MK1226
  Tac:  Ta0090
  Tvo:  TVN0164
  Pho:  PH0316
  Pab:  PAB1083
  Pya:  PAE0221
  Sso:  SSO0636
  Sce:  YGL234w_2
  Spo:  SPBC405.01_2
  Aae:  aq_769
  Tma:  TM1251
  Fnu:  FN0986
  Dra:  DR1394
  Cac:  CAC1393
  Cgl:  Cgl2529
  Mtu:  Rv0809
  MtC:  MT0830
  Mle:  ML2205
  Lla:  L165202
  Spy:  SPy0027
  Spn:  SP0047
  Sau:  SA0923
  Lin:  lin1879
  Bsu:  BS_purM
  Bha:  BH0631
  Syn:  slr0838
  Nos:  alr3525
  Eco:  purM
  EcZ:  ZpurM
  Ecs:  ECs3361
  Ype:  YPO2828
  Sty:  STM2499
  Vch:  VC2226
  Pae:  PA0945
  Hin:  HI1429
  Pmu:  PM0021
  Xfa:  XF0587
  Nme:  NMB1252
  NmA:  NMA1421
  Rso:  RSc2623
  Cje:  Cj1529c
  Atu:  AGc2111
  Sme:  SMc00615
  Bme:  BMEI1240
  Mlo:  mll7962
  Ccr:  CC1703
_______

[F] COG0151 Phosphoribosylamine-glycine ligase
  Afu:  AF1157
  Hbs:  VNG1305G
  Mac:  MA3309
  Mth:  MTH1445
  Mja:  MJ0937
  Mka:  MK1071
  Tac:  Ta0595m
  Tvo:  TVN0625
  Pho:  PH0323
  Pab:  PAB1271
  Pya:  PAE0216
  Sso:  SSO0635
  Sce:  YGL234w_1
  Spo:  SPBC405.01_1
  Aae:  aq_742
  Tma:  TM1250
  Fnu:  FN0981
  Dra:  DR1431
  Cac:  CAC1396
  Cgl:  Cgl2548
  Mtu:  Rv0772
  MtC:  MT0796
  Mle:  ML2235
  Lla:  L153005
  Spy:  SPy0032
  Spn:  SP0051
  Sau:  SA0926
  Lin:  lin1876
  Bsu:  BS_purD
  Bha:  BH0634
  Syn:  slr1159
  Nos:  alr3510
  Eco:  purD
  EcZ:  ZpurD
  Ecs:  ECs4928
  Ype:  YPO3729
  Sty:  STM4175
  Vch:  VC0275
  Pae:  PA4855
  Hin:  HI0888
  Pmu:  PM0224
  Xfa:  XF1976
  Nme:  NMB2151
  NmA:  NMA0238
  Rso:  RSc2191
  Hpy:  HP1218
  jHp:  jhp1140
  Cje:  Cj1250
  Atu:  AGc1152
  Sme:  SMc00993
  Bme:  BMEI1519
  Mlo:  mlr7447
  Ccr:  CC0297
_______

[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
  Afu:  AF1272
  Hbs:  VNG1939G
  Mac:  MA4063
  Mth:  MTH170
  Mja:  MJ1592
  Mka:  MK0792
  Tac:  Ta0309
  Tvo:  TVN1291
  Pho:  PH0239
  Pab:  PAB2400
  Pya:  PAE0215
  Sso:  SSO0626
  Sce:  YAR015w
  Spo:  SPBC409.10
  Aae:  aq_2117
  Tma:  TM1243
  Fnu:  FN0988
  Dra:  DR0226
  Cac:  CAC1391
  Cgl:  Cgl2543
  Mtu:  Rv0780
  MtC:  MT0804
  Mle:  ML2227
  Lla:  L177350
  Spy:  SPy0024
  Spn:  SP0044
  Sau:  SA0918
  Lin:  lin1884
  Bsu:  BS_purC
  Bha:  BH0626
  Syn:  slr1226
  Nos:  alr2268
  Eco:  purC
  EcZ:  ZpurC
  Ecs:  ECs3338
  Ype:  YPO3059
  Sty:  STM2487
  Vch:  VC1190
  Pae:  PA1013
  Hin:  HI1726
  Pmu:  PM0815
  Xfa:  XF0205
  Nme:  NMB0757
  NmA:  NMA0968
  Rso:  RSc0574
  Cje:  Cj0512
  Atu:  AGc3382 AGc4615
  Sme:  SMc00495
  Bme:  BMEI1122
  Mlo:  mll0069 mll2603
  Ccr:  CC2491 CC3242
  Rpr:  RP220
  Rco:  RC0294
_______

[G] COG0153 Galactokinase
  Pho:  PH0369
  Pya:  PAE1185
  Sce:  YBR020w YDR009w
  Spo:  SPBPB2B2.13
  Tma:  TM1190
  Fnu:  FN2107
  Cac:  CAC2959
  Cgl:  Cgl2184
  Mtu:  Rv0620
  MtC:  MT0648
  Lla:  L0028
  Spn:  SP1853
  Bsu:  BS_galK
  Bha:  BH1107
  Eco:  galK
  EcZ:  ZgalK
  Ecs:  ECs0785
  Ype:  YPO1137
  Sty:  STM0774
  Vch:  VC1595
  Hin:  HI0819
  Pmu:  PM1035
  Tpa:  TP0418
_______

[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
  Afu:  AF1954 AF2329
  Hbs:  VNG0872G
  Mac:  MA4523
  Mth:  MTH1496
  Mja:  MJ1160
  Mka:  MK0238
  Pya:  PAE1525
  Sso:  SSO0765 SSO0957 SSO2122
  Ape:  APE0979 APE1717
  Sce:  YBR208c_1 YDR242w YMR293c
  Spo:  SPAC869.01 SPBC646.03 SPCC550.07
  Aae:  aq_247
  Tma:  TM1272
  Fnu:  FN0754
  Dra:  DR0235 DR1377 DR1625 DR1856
  Cac:  CAC2670 CAC2977
  Cgl:  Cgl1218 Cgl2837
  Mtu:  Rv1263 Rv2363 Rv2888c Rv3011c Rv3175 Rv3375
  MtC:  MT1301 MT2432 MT2956 MT3091 MT3264 MT3485
  Mle:  ML1596 ML1702
  Lla:  L0473 L169390
  Spy:  SPy0902 SPy1771
  Spn:  SP0437
  Sau:  SA1716
  Lin:  lin0842 lin1867
  Bsu:  BS_yerM
  Bha:  BH0666
  Syn:  sll0828 slr0877
  Nos:  all1053 all1235 all7525 alr1018
  Ype:  YPO3261
  Pae:  PA0202 PA0704 PA4163 PA4342 PA4483
  Nme:  NMB1356
  NmA:  NMA1568
  Rso:  RSc0057 RSc0589
  Hpy:  HP0830
  jHp:  jhp0769
  Cje:  Cj1059c
  Atu:  AGc2430 AGl3143 AGl854 AGpT48
  Sme:  SMa1377 SMa2363 SMc01352 SMc02881 SMc03245
  Bme:  BMEI1360 BMEII0197 BMEII0289 BMEII0675 BMEII1134
  Mlo:  mll0675 mll3370 mlr0229 mlr2310 mlr2975 mlr3187 mlr4825
        mlr5350 mlr6081 mlr7070 mlr9017
  Ccr:  CC1323 CC1830 CC2437 CC2473 CC2613
  Rpr:  RP152
  Rco:  RC0194
  Ctr:  CT003
  Cpn:  CPn0003
  Tpa:  TP1020
  Bbu:  BB0342
  Uur:  UU545
  Mpu:  MYPU_2000
  Mpn:  MPN237
  Mge:  MG099
_______

[P] COG0155 Sulfite reductase, beta subunit (hemoprotein)
  Afu:  AF0164
  Pya:  PAE2577
  Sso:  SSO2909
  Sce:  YJR137c_4
  Spo:  SPAC10F6.01c_4
  Aae:  aq_206_2
  Dra:  DRA0013
  Cac:  CAC0094
  Cgl:  Cgl1448 Cgl2756
  Mtu:  Rv2064 Rv2391
  MtC:  MT2124 MT2461
  Bsu:  BS_yvgQ
  Bha:  BH0610
  Syn:  slr0898 slr0963
  Nos:  alr0607 alr1348
  Eco:  cysI
  EcZ:  ZcysI
  Ecs:  ECs3618
  Ype:  YPO3371
  Sty:  STM2947
  Buc:  BU427
  Vch:  VC0385
  Pae:  PA1838 PA2906 PA4130
  Xfa:  XF1498
  Nme:  NMB1151 NMB1189
  NmA:  NMA1362
  Rso:  RSc1862 RSc2425
  Atu:  AGc2687 AGc5083
  Sme:  SMc02124 SMc03193
  Bme:  BMEI0715 BMEI1766
  Mlo:  mll3230 mlr1378
  Ccr:  CC1119
_______

[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes
  Mja:  MJ1298
  Tac:  Ta1189
  Tvo:  TVN0398
  Pho:  PH0292
  Pab:  PAB1244
  Sce:  YDR062w YDR232w YMR296c
  Spo:  SPAC21E11.08 SPAC2F3.09 SPBC18E5.02c
  Ecu:  ECU02g0860 ECU05g0730
  Aae:  aq_626
  Fnu:  FN0849
  Dra:  DR2346
  Mtu:  Rv0032_2 Rv1569
  MtC:  MT0037_2 MT1620
  Mle:  ML1217
  Sau:  SA0508 SA2212
  Bsu:  BS_bioF BS_kbl
  Bha:  BH3907
  Syn:  slr0917
  Nos:  all0374
  Eco:  bioF kbl
  EcZ:  ZbioF Zkbl
  Ecs:  ECs0854 ECs4495
  Ype:  YPO0059 YPO1152
  Sty:  STM0795 STM3709
  Vch:  VC1113 VCA0523 VCA0886
  Pae:  PA0501
  Hin:  HI1553
  Pmu:  PM1901
  Xfa:  XF1357
  Nme:  NMB0472
  NmA:  NMA2013
  Rso:  RSc1478 RSp0961
  Hpy:  HP0598
  jHp:  jhp0545
  Cje:  Cj0306c
  Atu:  AGc4738 AGl1707 AGpA173
  Sme:  SMa0972 SMc01565 SMc02272 SMc03104
  Bme:  BMEI1604 BMEII0776
  Mlo:  mll5695 mll5830 mll6006 mll6007_2 mll6600 mll6664 mll9099
        mll9204 mlr8297
  Ccr:  CC1162 CC1355 CC1576
  Rpr:  RP841
  Rco:  RC1303
  Ctr:  CT777
  Cpn:  CPn0923 CPn1043
_______

[H] COG0157 Nicotinate-nucleotide pyrophosphorylase
  Afu:  AF1839
  Hbs:  VNG1884G
  Mac:  MA0322 MA0955
  Mth:  MTH1832
  Mja:  MJ0493
  Mka:  MK0446
  Pho:  PH0011
  Pab:  PAB2347
  Pya:  PAE3114_1
  Sso:  SSO0996
  Sce:  YFR047c
  Aae:  aq_869
  Tma:  TM1645
  Fnu:  FN0010
  Cac:  CAC1023
  Cgl:  Cgl1044
  Mtu:  Rv1596
  MtC:  MT1632
  Mle:  ML1227
  Spy:  SPy0197
  Spn:  SP2016
  Lin:  lin2132
  Bsu:  BS_nadC
  Bha:  BH1219
  Syn:  slr0936
  Nos:  all2091
  Eco:  nadC
  EcZ:  ZmodD ZnadC
  Ecs:  ECs0113 ECs1694
  Ype:  YPO3424
  Sty:  STM0145
  Vch:  VC2422
  Pae:  PA4524
  Hin:  HI1473
  Pmu:  PM1111
  Xfa:  XF1925
  Nme:  NMB0396
  NmA:  NMA2088
  Rso:  RSc2448
  Hpy:  HP1355
  jHp:  jhp1273
  Atu:  AGl1516
  Sme:  SMc02598
  Mlo:  mll5833 mll6272 mll9102
  Ccr:  CC2915
_______

[G] COG0158 Fructose-1,6-bisphosphatase
  Hbs:  VNG0684G
  Sce:  YLR377c
  Spo:  SPBC1198.14c
  Syn:  slr0952
  Nos:  all4021
  Eco:  fbp
  EcZ:  Zfbp
  Ecs:  ECs5209
  Ype:  YPO3520
  Sty:  STM4415
  Vch:  VC2544
  Pae:  PA5110
  Hin:  HI1645
  Pmu:  PM0930
  Nme:  NMB1060
  NmA:  NMA1259
  Rso:  RSc2126
  Hpy:  HP1385
  jHp:  jhp1440
  Cje:  Cj0840c
  Sme:  SMb20202
  Bme:  BMEII0422
  Ccr:  CC1385
_______

[E] COG0159 Tryptophan synthase alpha chain
  Afu:  AF1599
  Hbs:  VNG0308Gm
  Mac:  MA2990
  Mth:  MTH1660
  Mja:  MJ1038
  Mka:  MK0403
  Tac:  Ta0803m
  Tvo:  TVN1027
  Pab:  PAB2049
  Pya:  PAE2458
  Sso:  SSO0889
  Ape:  APE2550
  Sce:  YGL026c_1
  Spo:  SPAC19A8.15_1
  Aae:  aq_1548
  Tma:  TM0137
  Dra:  DR0942
  Cac:  CAC3157
  Cgl:  Cgl2976
  Mtu:  Rv1613
  MtC:  MT1648
  Mle:  ML1273
  Lla:  L0048
  Spn:  SP1811
  Sau:  SA1205
  Lin:  lin1668
  Bsu:  BS_trpA
  Bha:  BH1664
  Syn:  slr0966
  Nos:  all0411 alr4811
  Eco:  trpA
  EcZ:  ZtrpA
  Ecs:  ECs1832
  Ype:  YPO2203
  Sty:  STM1727
  Buc:  BU277
  Vch:  VC1169
  Pae:  PA0035
  Hin:  HI1432
  Pmu:  PM0577
  Xfa:  XF1376
  Nme:  NMB0678
  NmA:  NMA0879
  Rso:  RSc1981
  Hpy:  HP1277
  jHp:  jhp1198
  Cje:  Cj0349
  Atu:  AGc30
  Sme:  SMc02765
  Bme:  BMEI2019
  Mlo:  mlr5073
  Ccr:  CC3543
  Ctr:  CT171
_______

[E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases
  Hbs:  VNG1524C VNG6210G
  Mac:  MA2859
  Tac:  Ta0068
  Tvo:  TVN0024
  Pho:  PH0138 PH0782 PH1423 PH1501
  Pab:  PAB0086 PAB0501 PAB1921 PAB2386
  Pya:  PAE1799
  Sso:  SSO2720 SSO2727 SSO3211
  Ape:  APE0457
  Sce:  YGR019w
  Spo:  SPAC1039.07c SPAC19D5.07
  Dra:  DRA0029
  Cac:  CAC0368 CAC1427
  Cgl:  Cgl0472 Cgl2387
  Mtu:  Rv2589 Rv3290c
  MtC:  MT2666 MT3389
  Mle:  ML0485
  Sau:  SA2397
  Bsu:  BS_ycnG
  Bha:  BH0919 BH0991 BH2624
  Nos:  all0396 alr2398
  Eco:  gabT goaG
  EcZ:  ZgabT ZgoaG
  Ecs:  ECs1879 ECs3523
  Ype:  YPO2844
  Sty:  STM2792
  Vch:  VCA0605 VCA0824
  Pae:  PA0266 PA2413
  Hin:  HI0949
  Rso:  RSc0029 RSp1424
  Atu:  AGpA358 AGpA435
  Sme:  SMa1761 SMa2400 SMb20973_3 SMb21186 SMc00675_2 SMc00677_3 SMc02413
  Bme:  BMEII0131 BMEII0348
  Mlo:  mlr5521 mlr5943 mlr6024 mlr6991 mlr7169
_______

[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
  Mja:  MJ1300
  Sce:  YNR058w
  Spo:  SPBC1773.03c
  Aae:  aq_170
  Fnu:  FN1002
  Dra:  DRA0121
  Cac:  CAC1362
  Cgl:  Cgl2553
  Mtu:  Rv1568 Rv3329
  MtC:  MT1619 MT3432
  Mle:  ML1216
  Sau:  SA2214
  Bsu:  BS_bioA BS_yhxA BS_yodT
  Bha:  BH0782 BH1035 BH2260
  Eco:  bioA
  EcZ:  ZbioA
  Ecs:  ECs0852
  Ype:  YPO1150
  Sty:  STM0793
  Buc:  BU292
  Vch:  VC1111
  Pae:  PA0132 PA0221 PA0299 PA0420 PA4805 PA5313
  Hin:  HI1554
  Pmu:  PM1900
  Xfa:  XF0189
  Nme:  NMB0732
  NmA:  NMA0942
  Rso:  RSc0082 RSc1477 RSp1056
  Hpy:  HP0976
  jHp:  jhp0910
  Cje:  Cj0307
  Atu:  AGc1843 AGl1704 AGl242 AGl2830 AGl2984 AGl3037
  Sme:  SMa1855 SMb20277 SMb20379 SMb20423 SMc01534 SMc04388
  Bme:  BMEI1757 BMEII0130 BMEII0371 BMEII0778
  Mlo:  mll0107 mll1207 mll1632 mll3663 mll5828 mll6003 mll6019
        mll7037 mll7127 mll9097 mlr5987 mlr5990 mlr6101 mlr6963
  Ccr:  CC1577 CC3132 CC3143
  Cpn:  CPn1041
_______

[J] COG0162 Tyrosyl-tRNA synthetase
  Afu:  AF0776
  Hbs:  VNG2237G
  Mac:  MA0815
  Mth:  MTH1767
  Mja:  MJ0389
  Mka:  MK0516
  Tac:  Ta0512
  Tvo:  TVN0989
  Pho:  PH1011
  Pab:  PAB1728
  Pya:  PAE0630 PAE1931
  Sso:  SSO0078
  Ape:  APE2074
  Sce:  YGR185c YPL097w
  Spo:  SPCC1672.05c SPCC576.06c
  Ecu:  ECU05g1120i
  Aae:  aq_1751
  Tma:  TM0478
  Fnu:  FN0054
  Dra:  DR2634
  Cac:  CAC0637 CAC0780
  Cgl:  Cgl1373
  Mtu:  Rv1689
  MtC:  MT1728
  Mle:  ML1352
  Lla:  L0359
  Spy:  SPy0096
  Spn:  SP2100
  Sau:  SA1550
  Lin:  lin1639
  Bsu:  BS_tyrS BS_tyrZ
  Bha:  BH3228
  Syn:  slr1031 ssr1720
  Nos:  alr2982
  Eco:  tyrS
  EcZ:  ZtyrS
  Ecs:  ECs2346
  Ype:  YPO2369
  Sty:  STM1449
  Buc:  BU121
  Vch:  VC0465 VC0631
  Pae:  PA0668 PA4138
  Hin:  HI1610
  Pmu:  PM0755
  Xfa:  XF0169
  Nme:  NMB1835
  NmA:  NMA0620
  Rso:  RSc0496
  Hpy:  HP0774
  jHp:  jhp0711
  Cje:  Cj1271c
  Atu:  AGc3358
  Sme:  SMc00526
  Bme:  BMEI1047
  Mlo:  mll0007
  Ccr:  CC1870
  Rpr:  RP556
  Rco:  RC0823
  Ctr:  CT062
  Cpn:  CPn0361
  Tpa:  TP0834
  Bbu:  BB0370
  Uur:  UU117
  Mpu:  MYPU_4850
  Mpn:  MPN669
  Mge:  MG455
_______

[H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase
  Afu:  AF1214
  Mac:  MA0711
  Mth:  MTH147
  Mja:  MJ0102
  Mka:  MK1465
  Tac:  Ta1100
  Tvo:  TVN0461
  Pho:  PH1014
  Pab:  PAB0651
  Pya:  PAE1481
  Sso:  SSO0437
  Ape:  APE1647
  Sce:  YDR538w
  Aae:  aq_528
  Dra:  DR2603
  Bsu:  BS_yclB
  Bha:  BH1651
  Syn:  slr1099
  Nos:  alr1241
  Eco:  ubiX
  EcZ:  Z4047 ZubiX
  Ecs:  ECs3195 ECs3593
  Ype:  YPO2773
  Sty:  STM2356 STM2921
  Vch:  VC2541
  Pae:  PA4019
  Pmu:  PM0700
  Nme:  NMB1945
  NmA:  NMA0507
  Rso:  RSc2905
  Hpy:  HP1476
  jHp:  jhp1369
  Cje:  Cj0768c
  Atu:  AGl942
  Sme:  SMa1285 SMa2219 SMb20135
  Bme:  BMEII0956
  Ccr:  CC3290
  Rpr:  RP541
  Rco:  RC0801
  Ctr:  CT220
  Cpn:  CPn0264
_______

[L] COG0164 Ribonuclease HII
  Afu:  AF0621
  Hbs:  VNG1984G
  Mac:  MA1959
  Mth:  MTH1023
  Mja:  MJ0135
  Mka:  MK0186
  Tac:  Ta1458
  Tvo:  TVN0133
  Pho:  PH1650
  Pab:  PAB0352
  Pya:  PAE1216
  Sso:  SSO2384
  Ape:  APE0496
  Sce:  YNL072w
  Spo:  SPAC4G9.02
  Ecu:  ECU03g0670
  Aae:  aq_1955
  Tma:  TM0915
  Fnu:  FN1371
  Dra:  DR1949
  Cac:  CAC1762
  Cgl:  Cgl1986
  Mtu:  Rv2902c
  MtC:  MT2970
  Mle:  ML1611
  Lla:  L0320
  Spy:  SPy1162
  Spn:  SP1156
  Sau:  SA1087
  Lin:  lin1312
  Bsu:  BS_rnh
  Bha:  BH2475
  Syn:  slr1130
  Nos:  alr4332
  Eco:  rnhB
  EcZ:  ZrnhB
  Ecs:  ECs0185
  Ype:  YPO1058
  Sty:  STM0230
  Vch:  VC2246
  Pae:  PA3642
  Hin:  HI1059
  Pmu:  PM1998
  Xfa:  XF1041
  Nme:  NMB0192
  NmA:  NMA0075
  Rso:  RSc1418
  Hpy:  HP1323
  jHp:  jhp1243
  Cje:  Cj0010c
  Atu:  AGc1307
  Sme:  SMc00867
  Bme:  BMEI1542
  Mlo:  mll7416
  Ccr:  CC0379
  Rpr:  RP202
  Rco:  RC0264
  Ctr:  CT029
  Cpn:  CPn0119
  Bbu:  BB0046
_______

[E] COG0165 Argininosuccinate lyase
  Afu:  AF0883
  Hbs:  VNG2436G
  Mac:  MA1318
  Mth:  MTH269
  Mja:  MJ0791
  Mka:  MK0622
  Tac:  Ta0649
  Tvo:  TVN0928
  Pya:  PAE2887
  Sso:  SSO0639
  Sce:  YHR018c
  Spo:  SPBC1539.03c SPBC1773.14
  Aae:  aq_1372
  Tma:  TM1781
  Dra:  DR0678
  Cac:  CAC0974
  Cgl:  Cgl1368
  Mtu:  Rv1659
  MtC:  MT1697
  Mle:  ML1413
  Lla:  L0114
  Sau:  SA0821
  Lin:  lin2196
  Bsu:  BS_argH
  Bha:  BH3186
  Syn:  slr1133
  Nos:  alr3887
  Eco:  argH
  EcZ:  ZargH
  Ecs:  ECs4889
  Ype:  YPO3924
  Sty:  STM4123
  Buc:  BU051
  Vch:  VC2641
  Pae:  PA5263
  Hin:  HI0811
  Pmu:  PM1120
  Xfa:  XF1003
  Nme:  NMB0637
  NmA:  NMA0847
  Rso:  RSc2363
  Cje:  Cj0931c
  Atu:  AGl2457 AGl463
  Sme:  SMb21094 SMc00725
  Bme:  BMEI0086
  Mlo:  mll9226_2 mlr3506
  Ccr:  CC2211
_______

[G] COG0166 Glucose-6-phosphate isomerase
  Hbs:  VNG1992G
  Mja:  MJ1605
  Tac:  Ta1419
  Tvo:  TVN1438
  Pya:  PAE1610
  Sso:  SSO2281
  Ape:  APE0768
  Sce:  YBR196c
  Spo:  SPBC1604.05
  Ecu:  ECU05g0650
  Aae:  aq_750
  Tma:  TM1385
  Fnu:  FN2054
  Dra:  DR1742
  Cac:  CAC2680
  Cgl:  Cgl0828
  Mtu:  Rv0946c
  MtC:  MT0972
  Mle:  ML0150
  Lla:  L0012
  Spy:  SPy0215
  Spn:  SP2070
  Sau:  SA0823
  Lin:  lin2466
  Bsu:  BS_pgi
  Bha:  BH3343
  Syn:  slr1349
  Nos:  alr1050
  Eco:  pgi
  EcZ:  Zpgi
  Ecs:  ECs5008
  Ype:  YPO3718
  Sty:  STM4221
  Buc:  BU573
  Vch:  VC0374
  Pae:  PA4732
  Hin:  HI1576
  Pmu:  PM0416
  Xfa:  XF0232
  Nme:  NMB0334 NMB1388
  NmA:  NMA1604 NMA2154
  Rso:  RSc1719 RSc2137
  Hpy:  HP1166
  jHp:  jhp1093
  Cje:  Cj1535c
  Atu:  AGc711
  Sme:  SMc02163
  Bme:  BMEI1636
  Mlo:  mlr5411
  Ccr:  CC0222
  Ctr:  CT378
  Cpn:  CPn1025
  Tpa:  TP0475
  Bbu:  BB0730
  Mpu:  MYPU_1310
  Mpn:  MPN250
  Mge:  MG111
_______

[F] COG0167 Dihydroorotate dehydrogenase
  Afu:  AF0745
  Hbs:  VNG2507G
  Mac:  MA0583
  Mth:  MTH1213
  Mja:  MJ0654
  Mka:  MK0563
  Tac:  Ta0404
  Tvo:  TVN1170
  Pho:  PH1516
  Pab:  PAB1936
  Pya:  PAE3263
  Sso:  SSO0610
  Ape:  APE0260
  Sce:  YKL216w
  Spo:  SPAC57A10.12c
  Aae:  aq_046
  Tma:  TM0333
  Fnu:  FN0424
  Dra:  DR0501
  Cac:  CAC2650
  Cgl:  Cgl1482
  Mtu:  Rv2139
  MtC:  MT2197
  Mle:  ML1293
  Lla:  L182555 L192589
  Spy:  SPy1432
  Spn:  SP0764 SP0964
  Sau:  SA2375
  Lin:  lin1947
  Bsu:  BS_pyrD
  Bha:  BH2534
  Syn:  sll0744 slr1418
  Nos:  all4272 alr1912
  Eco:  pyrD yeiA_1
  EcZ:  ZpyrD ZyeiA_1
  Ecs:  ECs1029 ECs3039_1
  Ype:  YPO1415
  Sty:  STM1058 STM2187_1
  Buc:  BU362
  Vch:  VC1491
  Pae:  PA0439_1 PA3050
  Hin:  HI1401
  Pmu:  PM0617
  Xfa:  XF2571
  Nme:  NMB0221
  NmA:  NMA0042
  Rso:  RSc1619
  Hpy:  HP1011
  jHp:  jhp0412
  Cje:  Cj0804
  Atu:  AGc861
  Sme:  SMc01815_1 SMc02245
  Bme:  BMEI1611 BMEI1639_1
  Mlo:  mll1643_1 mll5681
  Ccr:  CC0528
_______

[P] COG0168 Trk-type K+ transport systems, membrane components
  Afu:  AF0839
  Hbs:  VNG1284G VNG1721G VNG2565G
  Mac:  MA1481 MA1483 MA2209
  Mth:  MTH1264
  Mja:  MJ1485
  Mka:  MK1010
  Pho:  PH1813
  Pab:  PAB0248
  Ape:  APE0715
  Sce:  YJL129c YKR050w
  Spo:  SPAC1F5.12_2 SPAC3F10.02c
  Aae:  aq_1504
  Tma:  TM1089
  Fnu:  FN0993 FN1725
  Dra:  DR1667 DR1668
  Spy:  SPy0327
  Spn:  SP0078 SP0479
  Sau:  SA0880 SA1815
  Lin:  lin0992
  Bsu:  BS_ykrM BS_yubG
  Bha:  BH0598 BH3094
  Syn:  slr1509
  Nos:  all1802 all5336 all5337
  Eco:  trkG trkH
  EcZ:  ZtrkH
  Ecs:  ECs4777
  Ype:  YPO3762
  Sty:  STM3986
  Vch:  VC0042 VC2756
  Pae:  PA3210
  Hin:  HI0723
  Pmu:  PM1498
  Nme:  NMB0661_2
  NmA:  NMA0859
  Cje:  Cj1283
  Atu:  AGc2223
  Sme:  SMa1691 SMc00937
  Bme:  BMEI0511
  Tpa:  TP0140
  Bbu:  BB0724
  Mpu:  MYPU_1440
  Mpn:  MPN460
  Mge:  MG322
_______

[E] COG0169 Shikimate 5-dehydrogenase
  Afu:  AF2327
  Hbs:  VNG0382G
  Mac:  MA4594
  Mth:  MTH242
  Mja:  MJ1084
  Mka:  MK0117
  Tac:  Ta0284
  Tvo:  TVN1317
  Pab:  PAB0300
  Pya:  PAE1913
  Sso:  SSO0306
  Ape:  APE0574
  Sce:  YDR127w_5
  Spo:  SPAC1834.02_5
  Aae:  aq_901
  Tma:  TM0346
  Fnu:  FN0045
  Dra:  DR0077 DR1173
  Cac:  CAC0897_2
  Cgl:  Cgl0419 Cgl1108 Cgl1591
  Mtu:  Rv2552c
  MtC:  MT2629
  Mle:  ML0515
  Lla:  L0061
  Spy:  SPy0534 SPy1584
  Spn:  SP1376
  Sau:  SA1424
  Lin:  lin0493 lin1525 lin2338
  Bsu:  BS_aroD
  Bha:  BH1324
  Syn:  slr1559
  Nos:  alr2057
  Eco:  aroE ydiB
  EcZ:  ZaroE ZydiB
  Ecs:  ECs2399 ECs4147
  Ype:  YPO0246 YPO1610
  Sty:  STM1359 STM3401 STM3859
  Buc:  BU493
  Vch:  VC0056
  Pae:  PA0025 PA0244
  Hin:  HI0607 HI0655
  Pmu:  PM1271 PM1429
  Xfa:  XF0624
  Nme:  NMB0358
  NmA:  NMA2129
  Rso:  RSc2777 RSp1398
  Hpy:  HP1249
  jHp:  jhp1170
  Cje:  Cj0405
  Atu:  AGc3 AGl1139 AGl673
  Sme:  SMb20037 SMc02044 SMc02791
  Bme:  BMEI2058 BMEII0059 BMEII0871
  Mlo:  mlr4492
  Ccr:  CC0003
  Ctr:  CT370_2
  Cpn:  CPn1035_2
_______

[I] COG0170 Dolichol kinase
  Afu:  AF1309 AF2371
  Mac:  MA2010 MA3143
  Mth:  MTH1099 MTH1373
  Mja:  MJ1137
  Mka:  MK0978
  Tac:  Ta0306
  Tvo:  TVN1294
  Pho:  PH0936
  Pab:  PAB1577
  Pya:  PAE0627
  Sce:  YMR013c YOR311c
  Spo:  SPBC3D6.05 SPCC63.10c
  Ecu:  ECU04g0670
  Aae:  aq_1542
  Syn:  slr1652
  Nos:  all1610
  Rpr:  RP860
  Rco:  RC1331
  Tpa:  TP0918
  Bbu:  BB0413
_______

[H] COG0171 NAD synthase
  Afu:  AF1000
  Hbs:  VNG2031G
  Mac:  MA1030 MA3526 MA3715
  Mth:  MTH1510
  Mja:  MJ1352
  Mka:  MK1418
  Tac:  Ta0899
  Tvo:  TVN1017
  Pho:  PH0182
  Pab:  PAB2244
  Pya:  PAE1219
  Sso:  SSO2172
  Ape:  APE1958
  Sce:  YHR074w_2
  Spo:  SPCC553.02_2
  Aae:  aq_959_2
  Tma:  TM0645 TM1253_2
  Fnu:  FN1202
  Dra:  DRA0201
  Cac:  CAC1050_2 CAC1782_2
  Cgl:  Cgl2482
  Mtu:  Rv2438c_2
  MtC:  MT2513_2
  Mle:  ML1463_2
  Lla:  L0203
  Spy:  SPy1652
  Spn:  SP1420
  Sau:  SA1728
  Lin:  lin1078
  Bsu:  BS_nadE
  Bha:  BH2285
  Syn:  slr1691_2
  Nos:  alr2485_2
  Eco:  nadE
  EcZ:  ZnadE
  Ecs:  ECs2446
  Ype:  YPO2912_2
  Sty:  STM1310
  Buc:  BU174
  Vch:  VCA0207
  Pae:  PA4920
  Xfa:  XF1961_2
  Nme:  NMB1364
  NmA:  NMA1576
  Rso:  RSc2347_2
  Hpy:  HP0329
  jHp:  jhp0312
  Cje:  Cj0810
  Atu:  AGc3052_2
  Sme:  SMb20649 SMc00161_2
  Bme:  BMEI0969_2
  Mlo:  mll0818_2 mll6744
  Ccr:  CC3619_2
  Tpa:  TP0780_2
  Bbu:  BB0522
  Uur:  UU460
  Mpu:  MYPU_6230
  Mpn:  MPN562
  Mge:  MG383
_______

[J] COG0172 Seryl-tRNA synthetase
  Afu:  AF2035
  Hbs:  VNG2072G
  Mac:  MA4048
  Mth:  MTH1122
  Mja:  MJ1077
  Mka:  MK1460
  Tac:  Ta0468
  Tvo:  TVN0987
  Pho:  PH0710
  Pab:  PAB0881
  Pya:  PAE3158
  Sso:  SSO0602
  Ape:  APE1976
  Sce:  YDR023w YHR011w
  Spo:  SPAC25B8.06c SPAC29A4.15
  Ecu:  ECU04g0750
  Aae:  aq_298
  Tma:  TM1379
  Fnu:  FN0110
  Dra:  DR1276
  Cac:  CAC0017 CAC0021
  Cgl:  Cgl2831
  Mtu:  Rv3834c
  MtC:  MT3942
  Mle:  ML0082
  Lla:  L150515
  Spy:  SPy1742
  Spn:  SP0411
  Sau:  SA0009
  Lin:  lin2890
  Bsu:  BS_serS
  Bha:  BH0024
  Syn:  slr1703
  Nos:  all3976
  Eco:  serS
  EcZ:  ZserS
  Ecs:  ECs0978
  Ype:  YPO1379
  Sty:  STM0963
  Buc:  BU313
  Vch:  VC1110
  Pae:  PA2612
  Hin:  HI0110
  Pmu:  PM0258
  Xfa:  XF2286
  Nme:  NMB1684
  NmA:  NMA1943
  Rso:  RSc2337
  Hpy:  HP1480
  jHp:  jhp1373
  Cje:  Cj0389
  Atu:  AGc3129 AGc4663
  Sme:  SMc02064
  Bme:  BMEI1082
  Mlo:  mll1081
  Ccr:  CC1999
  Rpr:  RP783
  Rco:  RC1216
  Ctr:  CT729
  Cpn:  CPn0870
  Tpa:  TP0647
  Bbu:  BB0226
  Uur:  UU106
  Mpu:  MYPU_0340
  Mpn:  MPN005
  Mge:  MG005
_______

[J] COG0173 Aspartyl-tRNA synthetase
  Sce:  YPL104w
  Spo:  SPCC736.06
  Aae:  aq_1677
  Tma:  TM1441
  Fnu:  FN0299
  Dra:  DR1347
  Cac:  CAC2269
  Cgl:  Cgl1597
  Mtu:  Rv2572c
  MtC:  MT2648
  Mle:  ML0501
  Lla:  L0346
  Spy:  SPy2156
  Spn:  SP2114
  Sau:  SA1456
  Lin:  lin1554
  Bsu:  BS_aspS
  Bha:  BH1252
  Syn:  slr1720
  Nos:  all2436
  Eco:  aspS
  EcZ:  ZaspS
  Ecs:  ECs2576
  Ype:  YPO2053
  Sty:  STM1901
  Buc:  BU316
  Vch:  VC1166
  Pae:  PA0963
  Hin:  HI0317
  Pmu:  PM0983
  Xfa:  XF1856
  Nme:  NMB0466
  NmA:  NMA2019
  Rso:  RSc0466
  Hpy:  HP0617
  jHp:  jhp0560
  Cje:  Cj0640c
  Atu:  AGc2136
  Sme:  SMc01756
  Bme:  BMEI1202
  Mlo:  mlr8358
  Ccr:  CC1892
  Rpr:  RP145
  Rco:  RC0187
  Ctr:  CT542
  Cpn:  CPn0662
  Tpa:  TP0985
  Bbu:  BB0446
  Uur:  UU286
  Mpu:  MYPU_3320
  Mpn:  MPN046
  Mge:  MG036
_______

[E] COG0174 Glutamine synthetase
  Afu:  AF0949
  Hbs:  VNG2093G
  Mac:  MA3382 MA4216
  Mth:  MTH1570
  Mja:  MJ1346
  Mka:  MK0338
  Tac:  Ta1498
  Tvo:  TVN1492
  Pho:  PH0359
  Pab:  PAB1292
  Pya:  PAE2556 PAE3442
  Sso:  SSO0366 SSO2440 SSO2554
  Ape:  APE2142
  Sce:  YPR035w
  Spo:  SPAC23H4.06
  Aae:  aq_111
  Tma:  TM0943
  Dra:  DR0451
  Cgl:  Cgl2165 Cgl2180
  Mtu:  Rv1878 Rv2220 Rv2222c Rv2860c
  MtC:  MT1927 MT2278 MT2280 MT2928
  Mle:  ML0925 ML1631
  Lla:  L0118
  Spy:  SPy1877
  Spn:  SP0502
  Sau:  SA1150
  Lin:  lin1337
  Bsu:  BS_glnA
  Bha:  BH2360 BH3867
  Syn:  slr1756
  Nos:  alr2328
  Eco:  glnA ycjK
  EcZ:  Z2491 ZglnA
  Ecs:  ECs1874 ECs4792
  Ype:  YPO0024
  Sty:  STM4007
  Vch:  VC2746
  Pae:  PA0296 PA0298 PA1566 PA2040 PA3356 PA5119 PA5508
        PA5522
  Hin:  HI0865
  Pmu:  PM1175
  Xfa:  XF1842
  Nme:  NMB0359
  NmA:  NMA2128
  Rso:  RSc1258 RSp0886
  Hpy:  HP0512
  jHp:  jhp0461
  Cje:  Cj0699c
  Atu:  AGc1068 AGc3253 AGc326 AGc3883 AGc4385 AGl1262
  Sme:  SMb20745 SMc00762 SMc00948 SMc01594 SMc01973 SMc02352 SMc02613
  Bme:  BMEI0979 BMEII0523 BMEII0554
  Mlo:  mll0343 mll3074 mll4187 mll5148 mll6521 mll7254 mll7307
        mlr0339 mlr6210
  Ccr:  CC1969 CC3130 CC3138
  Rpr:  RP495
  Rco:  RC0671
_______

[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
  Hbs:  VNG0459G
  Mac:  MA2894_2
  Mja:  MJ0066_2 MJ0973_2
  Mka:  MK0245_2 MK0621_2
  Tac:  Ta1396
  Pho:  PH0268_2 PH1441_2
  Pab:  PAB0168_2 PAB1895_2
  Pya:  PAE1989_2 PAE2575
  Sso:  SSO2911
  Ape:  APE2075_2
  Sce:  YDL045c YPR167c
  Spo:  SPAC13G7.06 SPCC1235.04c
  Fnu:  FN0444_2
  Dra:  DRA0015
  Cac:  CAC0109 CAC1200
  Cgl:  Cgl2754 Cgl2755
  Mtu:  Rv1285 Rv2392
  MtC:  MT1323 MT2462
  Bsu:  BS_cysH BS_yitB
  Bha:  BH1486
  Syn:  slr1791
  Nos:  all4464 alr4917
  Eco:  cysD cysH
  EcZ:  ZcysD ZcysH
  Ecs:  ECs3606 ECs3617
  Ype:  YPO3366
  Sty:  STM2935 STM2946
  Buc:  BU424 BU426
  Vch:  VC0386 VC2560
  Pae:  PA1756 PA4443
  Xfa:  XF1497 XF1500 XF1763
  Nme:  NMB1154 NMB1155 NMB1192 NMB1193
  NmA:  NMA1365 NMA1366
  Rso:  RSc2422 RSc2423
  Atu:  AGc1496 AGc1497
  Sme:  SMa0855 SMb21223 SMc00091 SMc00092
  Bme:  BMEI1755 BMEI1765
  Mlo:  mll3228 mlr7575
  Ccr:  CC1121 CC1483
_______

[G] COG0176 Transaldolase
  Mja:  MJ0960
  Tac:  Ta0616
  Tvo:  TVN0666
  Sce:  YGR043c YLR354c
  Spo:  SPCC1020.06c
  Aae:  aq_119
  Tma:  TM0295
  Dra:  DR1337
  Cac:  CAC1347
  Cgl:  Cgl1537
  Mtu:  Rv1448c
  MtC:  MT1495
  Mle:  ML0582
  Spy:  SPy1678 SPy1947 SPy2048
  Spn:  SP0252
  Sau:  SA1599
  Lin:  lin0361 lin0500 lin0646 lin2886
  Bsu:  BS_ywjH
  Bha:  BH3785
  Syn:  slr1793
  Nos:  all2563 all4020
  Eco:  mipB talA talB talC
  EcZ:  ZmipB ZtalA ZtalB ZtalC
  Ecs:  ECs0008 ECs0903 ECs3326 ECs4875
  Ype:  YPO0463 YPO2232
  Sty:  STM0007 STM2473 STM4109
  Buc:  BU093
  Vch:  VCA0623
  Pae:  PA2796
  Hin:  HI1125
  Pmu:  PM1602 PM1639
  Nme:  NMB0351
  NmA:  NMA2136
  Rso:  RSc1231
  Hpy:  HP1495
  jHp:  jhp1388
  Cje:  Cj0281c
  Atu:  AGl812
  Sme:  SMc02495
  Bme:  BMEI0244
  Mlo:  mlr4072
  Ccr:  CC3614
  Ctr:  CT313
  Cpn:  CPn0083
_______

[L] COG0177 Predicted EndoIII-related endonuclease
  Afu:  AF1692
  Hbs:  VNG0398G VNG0592G
  Mac:  MA4014 MA4609
  Mth:  MTH764
  Mja:  MJ0613_1
  Mka:  MK0193 MK1362
  Tac:  Ta0790m
  Tvo:  TVN0804
  Pho:  PH1498
  Pab:  PAB0459
  Pya:  PAE0880
  Sso:  SSO0116
  Ape:  APE0150
  Sce:  YAL015c YOL043c
  Spo:  SPAC30D11.07
  Ecu:  ECU08g0880
  Aae:  aq_282 aq_496
  Tma:  TM0366
  Fnu:  FN0057
  Dra:  DR0289 DR0928 DR2438
  Cac:  CAC0689
  Cgl:  Cgl0293
  Mtu:  Rv3674c
  MtC:  MT3775
  Mle:  ML2301
  Lla:  L0253
  Spy:  SPy0929
  Spn:  SP1279
  Sau:  SA1285
  Lin:  lin2008
  Bsu:  BS_nth
  Bha:  BH1698
  Syn:  slr1822
  Nos:  all3970
  Eco:  nth
  EcZ:  Znth
  Ecs:  ECs2342
  Ype:  YPO2239
  Sty:  STM1453
  Buc:  BU119
  Vch:  VC1011
  Pae:  PA3495
  Hin:  HI1689
  Pmu:  PM0381
  Xfa:  XF0647
  Nme:  NMB0533
  NmA:  NMA0711
  Rso:  RSc1005
  Hpy:  HP0585
  jHp:  jhp0532
  Cje:  Cj0595c
  Atu:  AGl820
  Sme:  SMc02843
  Bme:  BMEI1782
  Mlo:  mll3176
  Ccr:  CC2272 CC3731
  Rpr:  RP746
  Rco:  RC1149
  Ctr:  CT697
  Cpn:  CPn0837
  Tpa:  TP0775
  Bbu:  BB0745
_______

[L] COG0178 Excinuclease ATPase subunit
  Hbs:  VNG2636G
  Mac:  MA3325
  Mth:  MTH443
  Aae:  aq_686
  Tma:  TM0480
  Fnu:  FN1103
  Dra:  DR1771 DRA0188
  Cac:  CAC0503 CAC1464
  Cgl:  Cgl1061 Cgl1343
  Mtu:  Rv1638
  MtC:  MT1675
  Mle:  ML1392
  Lla:  L0256
  Spy:  SPy1825
  Spn:  SP0186
  Sau:  SA0714
  Lin:  lin1813 lin2156 lin2631
  Bsu:  BS_uvrA
  Bha:  BH0714 BH3594
  Syn:  slr1844
  Nos:  alr3716
  Eco:  uvrA
  EcZ:  ZuvrA
  Ecs:  ECs5040
  Ype:  YPO0324
  Sty:  STM4254
  Vch:  VC0394
  Pae:  PA4234
  Hin:  HI0249
  Pmu:  PM1951
  Xfa:  XF2426
  Nme:  NMB0962
  NmA:  NMA1159
  Rso:  RSc0420 RSp0994
  Hpy:  HP0705
  jHp:  jhp0644
  Cje:  Cj0342c
  Atu:  AGc2790
  Sme:  SMc01235
  Bme:  BMEI0878
  Mlo:  mlr0750
  Ccr:  CC2590
  Rpr:  RP835
  Rco:  RC1294
  Ctr:  CT333
  Cpn:  CPn0096
  Tpa:  TP0514
  Bbu:  BB0837
  Uur:  UU102
  Mpu:  MYPU_7100
  Mpn:  MPN619
  Mge:  MG421
_______

[Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
  Afu:  AF0091 AF2225
  Hbs:  VNG1037G
  Mac:  MA0585
  Mth:  MTH1507
  Mja:  MJ1656
  Mka:  MK1002
  Tac:  Ta0750 Ta1154m
  Tvo:  TVN1232
  Pho:  PH0643
  Pab:  PAB1451
  Pya:  PAE2688
  Sso:  SSO2520 SSO2773 SSO2941
  Ape:  APE0053
  Sce:  YNL168c
  Spo:  SPBC21C3.09c
  Dra:  DR1609 DRA0226
  Cgl:  Cgl1260 Cgl2964
  Mtu:  Rv0939_1 Rv2993c
  MtC:  MT0966_1 MT3071
  Mle:  ML1689
  Sau:  SA0829
  Lin:  lin2367
  Bsu:  BS_yisK
  Bha:  BH1071 BH2000 BH2005
  Syn:  slr1877
  Nos:  alr4803
  Eco:  ycgM
  EcZ:  Z1942 Z3392
  Ecs:  ECs1675 ECs3029
  Ype:  YPO1566 YPO2082
  Sty:  STM0331 STM1101 STM1812 STM2177
  Vch:  VC1346 VCA1004
  Pae:  PA0318 PA2008 PA2471 PA4121 PA4122
  Pmu:  PM1528 PM1529
  Nme:  NMB1338
  NmA:  NMA1552
  Rso:  RSc0301 RSc0383 RSc1086 RSc1824 RSp0690
  Cje:  Cj0021c
  Atu:  AGc22 AGc2795 AGl564
  Sme:  SMb21112 SMc03207 SMc04240
  Bme:  BMEI1708 BMEI1882 BMEII0137
  Mlo:  mll4780 mlr1134 mlr8306
  Ccr:  CC2531 CC3567
_______

[J] COG0180 Tryptophanyl-tRNA synthetase
  Afu:  AF1694
  Hbs:  VNG2208G VNG2232G
  Mac:  MA0172
  Mth:  MTH251
  Mja:  MJ1415
  Mka:  MK0343
  Tac:  Ta1211
  Tvo:  TVN1253
  Pho:  PH1921
  Pab:  PAB1111
  Pya:  PAE3091
  Sso:  SSO0452
  Ape:  APE2461
  Sce:  YDR268w YOL097c
  Spo:  SPAC2F7.13c SPAC3G9.13c
  Ecu:  ECU11g0530
  Aae:  aq_992
  Tma:  TM0492
  Fnu:  FN0405
  Dra:  DR0558 DR1093
  Cac:  CAC0626
  Cgl:  Cgl0657
  Mtu:  Rv3336c
  MtC:  MT3440
  Mle:  ML0686
  Lla:  L0358
  Spy:  SPy2207
  Spn:  SP2229
  Sau:  SA0855
  Lin:  lin2301
  Bsu:  BS_trpS
  Bha:  BH2200 BH2870
  Syn:  slr1884
  Nos:  all1269
  Eco:  trpS
  EcZ:  ZtrpS
  Ecs:  ECs4226
  Ype:  YPO0157
  Sty:  STM3481 STM4508
  Buc:  BU536
  Vch:  VC2623
  Pae:  PA4439
  Hin:  HI0637
  Pmu:  PM1621
  Xfa:  XF0428
  Nme:  NMB1471
  NmA:  NMA1682
  Rso:  RSc1143
  Hpy:  HP1253
  jHp:  jhp1174
  Cje:  Cj0388
  Atu:  AGc611
  Sme:  SMc01121
  Bme:  BMEI1806
  Mlo:  mll5317
  Ccr:  CC0064
  Rpr:  RP468
  Rco:  RC0710
  Ctr:  CT585
  Cpn:  CPn0802
  Tpa:  TP0632
  Bbu:  BB0005
  Uur:  UU175
  Mpu:  MYPU_7450
  Mpn:  MPN265
  Mge:  MG126
_______

[H] COG0181 Porphobilinogen deaminase
  Afu:  AF1242
  Hbs:  VNG2330G
  Mac:  MA0582
  Mth:  MTH874
  Mja:  MJ0569
  Mka:  MK0746
  Tac:  Ta0572
  Tvo:  TVN0634
  Pya:  PAE0580
  Sso:  SSO0183
  Ape:  APE2298
  Sce:  YDL205c
  Spo:  SPAC24B11.13
  Aae:  aq_263
  Fnu:  FN0645
  Dra:  DR2352
  Cac:  CAC0097
  Cgl:  Cgl0413
  Mtu:  Rv0510
  MtC:  MT0531
  Mle:  ML2421
  Sau:  SA1494
  Lin:  lin1591
  Bsu:  BS_hemC
  Bha:  BH3046
  Syn:  slr1887
  Nos:  alr1878
  Eco:  hemC
  EcZ:  ZhemC
  Ecs:  ECs4735
  Ype:  YPO3849
  Sty:  STM3938
  Buc:  BU591
  Vch:  VC0120
  Pae:  PA5260
  Pmu:  PM1812
  Xfa:  XF1627
  Nme:  NMB0539
  NmA:  NMA0718
  Rso:  RSc2357
  Hpy:  HP0237
  jHp:  jhp0222
  Cje:  Cj0545
  Atu:  AGc4808
  Sme:  SMc03231
  Bme:  BMEI0176
  Mlo:  mll4223
  Ccr:  CC0072
  Rpr:  RP466
  Rco:  RC0706
  Ctr:  CT299
  Cpn:  CPn0052
_______

[J] COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
  Afu:  AF0370
  Mac:  MA0076
  Mth:  MTH1872
  Mja:  MJ0454
  Mka:  MK0335
  Tac:  Ta1212
  Tvo:  TVN1252
  Pho:  PH0702
  Pab:  PAB2444
  Pya:  PAE0741
  Sso:  SSO2978
  Ape:  APE0686
  Sce:  YPR118w
  Spo:  SPBC23E6.10c
  Aae:  aq_2114_2
  Tma:  TM0911
  Fnu:  FN1413
  Bsu:  BS_ykrS
  Syn:  slr1938
  Nos:  all3566
  Pae:  PA3169
  Xfa:  XF2553
  Sme:  SMb20624
  Mlo:  mll7284
_______

[I] COG0183 Acetyl-CoA acetyltransferase
  Afu:  AF0018 AF0034 AF0133 AF0134 AF0201 AF0202 AF0283
        AF0438 AF0967 AF0968 AF1028 AF1197 AF1291 AF2243
        AF2416
  Hbs:  VNG0678G VNG0931G VNG2063G
  Mac:  MA4042
  Mth:  MTH793
  Mja:  MJ1549
  Mka:  MK1378
  Tac:  Ta0030 Ta0296 Ta0351 Ta0582 Ta1456
  Tvo:  TVN0069 TVN0131 TVN0649 TVN1260 TVN1304
  Pho:  PH0676
  Pab:  PAB0907
  Pya:  PAE1220 PAE1377 PAE2183 PAE2471 PAE2486 PAE2488 PAE3656
  Sso:  SSO0534 SSO2061 SSO2062 SSO2377 SSO2496 SSO2508 SSO2625
        SSO2697 SSO2874 SSO3113
  Ape:  APE0929 APE1872 APE2108 APE2382 APE2384
  Sce:  YIL160c YPL028w
  Spo:  SPBC215.09c
  Ecu:  ECU06g0940
  Fnu:  FN0495
  Dra:  DR1072 DR1428 DR1960 DR2480 DRA0053
  Cac:  CAC2873 CAP0078
  Cgl:  Cgl2341
  Mtu:  Rv0243 Rv0859 Rv0914c Rv1074c Rv1323 Rv1627c Rv1867
        Rv2790c Rv3522 Rv3523 Rv3540c Rv3546 Rv3556c
  MtC:  MT0257 MT0882 MT0939 MT1104 MT1169 MT1365 MT1663
        MT2860 MT3622.1 MT3623 MT3644 MT3650 MT3660
  Mle:  ML1158 ML2162 ML2564
  Lla:  L11745 L25946
  Spy:  SPy0140 SPy0524 SPy1637
  Sau:  SA0223 SA0342 SA0534
  Lin:  lin1453
  Bsu:  BS_mmgA BS_yhfS BS_yusK
  Bha:  BH0205 BH1997 BH2029 BH3487 BH3801
  Syn:  slr1993
  Eco:  atoB fadA paaJ yfcY yqeF
  EcZ:  Z3605 ZfadA ZyqeF
  Ecs:  ECs3225 ECs3701 ECs4773
  Ype:  YPO2746 YPO3767
  Sty:  STM2389 STM3019 STM3982
  Vch:  VC1046 VC2759 VCA0690
  Pae:  PA0228 PA1016 PA1736 PA2001 PA2553 PA2940 PA3013
        PA3454 PA3589 PA3925 PA4785
  Hin:  HI0771
  Rso:  RSc0276 RSc0475 RSc1632 RSc1637 RSc1761 RSc2252
  Hpy:  HP0690
  jHp:  jhp0638
  Atu:  AGc5022 AGc886 AGl121 AGl2713 AGl640
  Sme:  SMa1450 SMb20589 SMc00262 SMc00966 SMc02228 SMc03879
  Bme:  BMEI0274 BMEII0496 BMEII0646 BMEII0817
  Mlo:  mll4180 mlr3847 mlr5628 mlr7614
  Ccr:  CC0077 CC0265 CC0510 CC0779 CC0894 CC1111 CC1432
        CC1967 CC2407 CC3111 CC3462
  Rpr:  RP737
  Rco:  RC1134 RC1135
  Bbu:  BB0109
_______

[J] COG0184 Ribosomal protein S15P/S13E
  Afu:  AF0801
  Hbs:  VNG0790G
  Mac:  MA0949
  Mth:  MTH1423
  Mja:  MJ0036
  Mka:  MK1593
  Tac:  Ta1131
  Tvo:  TVN1208
  Pho:  PH0058
  Pab:  PAB0033
  Pya:  PAE3485
  Sso:  SSO0408
  Ape:  APE1139
  Sce:  YDR064w YDR337w_2
  Spo:  SPAC6F6.07c SPBC11B10.04c
  Ecu:  ECU08g1060
  Aae:  aq_226a
  Tma:  TM1344
  Fnu:  FN1979
  Dra:  DR0341
  Cac:  CAC1807
  Cgl:  Cgl1930
  Mtu:  Rv2785c
  MtC:  MT2855
  Mle:  ML0853
  Lla:  L0392
  Spy:  SPy1955
  Spn:  SP1626
  Sau:  SA1116
  Lin:  lin1367
  Bsu:  BS_rpsO
  Bha:  BH2408
  Syn:  ssl1784
  Nos:  asl0749
  Eco:  rpsO
  EcZ:  ZrpsO
  Ecs:  ECs4046
  Ype:  YPO3493
  Sty:  STM3283
  Buc:  BU374
  Vch:  VC0646
  Pae:  PA4741
  Hin:  HI1328 HI1468
  Pmu:  PM0301
  Xfa:  XF0238
  Nme:  NMB0609
  NmA:  NMA0815
  Rso:  RSc2069
  Hpy:  HP1040
  jHp:  jhp0384
  Cje:  Cj0884
  Atu:  AGc126
  Sme:  SMc00323
  Bme:  BMEI1962
  Mlo:  msr5561
  Ccr:  CC0035
  Rpr:  RP503
  Rco:  RC0664
  Ctr:  CT843
  Cpn:  CPn1000
  Tpa:  TP0887
  Bbu:  BB0804
  Uur:  UU204
  Mpu:  MYPU_3280
  Mpn:  MPN622
  Mge:  MG424
_______

[J] COG0185 Ribosomal protein S19
  Afu:  AF1921
  Hbs:  VNG1693G
  Mac:  MA1076
  Mth:  MTH6
  Mja:  MJ0180
  Mka:  MK0990
  Tac:  Ta1267
  Tvo:  TVN0328
  Pho:  PH1774
  Pab:  PAB2123
  Pya:  PAE1729
  Sso:  SSO0715
  Ape:  APE0367
  Sce:  YNR037c YOL040c
  Spo:  SPAC1071.07c SPAC1751.02c SPCC1393.03
  Ecu:  ECU08g0350i
  Aae:  aq_015_2
  Tma:  TM1496
  Fnu:  FN1641
  Dra:  DR0315
  Cac:  CAC3129
  Cgl:  Cgl0500
  Mtu:  Rv0705
  MtC:  MT0732
  Mle:  ML1859
  Lla:  L0396
  Spy:  SPy0053
  Spn:  SP0213
  Sau:  SA2043
  Lin:  lin2777
  Bsu:  BS_rpsS
  Bha:  BH0138
  Syn:  ssl3432
  Nos:  asl4211
  Eco:  rpsS
  EcZ:  ZrpsS
  Ecs:  ECs4181
  Ype:  YPO0214
  Sty:  STM3436
  Buc:  BU520
  Vch:  VC2592
  Pae:  PA4259
  Hin:  HI0781
  Pmu:  PM1411
  Xfa:  XF1156
  Nme:  NMB0146
  NmA:  NMA0125
  Rso:  RSc3015
  Hpy:  HP1315
  jHp:  jhp1235
  Cje:  Cj1703c
  Atu:  AGc3549
  Sme:  SMc01305
  Bme:  BMEI0761
  Mlo:  msr0297
  Ccr:  CC1252
  Rpr:  RP655
  Rco:  RC1002
  Ctr:  CT524
  Cpn:  CPn0643
  Tpa:  TP0193
  Bbu:  BB0482
  Uur:  UU235
  Mpu:  MYPU_5840
  Mpn:  MPN169
  Mge:  MG155
_______

[J] COG0186 Ribosomal protein S17
  Afu:  AF1916
  Hbs:  VNG1700G
  Mac:  MA1081 MA2024_1
  Mth:  MTH12
  Mja:  MJ0465
  Mka:  MK1217
  Tac:  Ta1262
  Tvo:  TVN0334
  Pho:  PH1770
  Pab:  PAB2127
  Pya:  PAE1730
  Sso:  SSO0709
  Ape:  APE0360
  Sce:  YBR048w YDR025w YMR188c_1
  Spo:  SPAC144.11 SPAC31G5.03 SPBC409.14c
  Ecu:  ECU04g0640
  Aae:  aq_020
  Tma:  TM1491
  Fnu:  FN1636
  Dra:  DR0320
  Cac:  CAC3124
  Cgl:  Cgl0505
  Mtu:  Rv0710
  MtC:  MT0737
  Mle:  ML1854
  Lla:  L0394
  Spy:  SPy0060
  Spn:  SP0218
  Sau:  SA2038
  Lin:  lin2772
  Bsu:  BS_rpsQ
  Bha:  BH0143
  Syn:  ssl3437
  Nos:  asl4206
  Eco:  rpsQ
  EcZ:  ZrpsQ
  Ecs:  ECs4176
  Ype:  YPO0219
  Sty:  STM3431
  Buc:  BU515
  Vch:  VC2587
  Pae:  PA4254
  Hin:  HI0786
  Pmu:  PM1406
  Xfa:  XF1161
  Nme:  NMB0151
  NmA:  NMA0120
  Rso:  RSc3010
  Hpy:  HP1310
  jHp:  jhp1230
  Cje:  Cj1698c
  Sme:  SMc01300
  Bme:  BMEI0766
  Mlo:  msr0304
  Ccr:  CC1257
  Rpr:  RP650
  Rco:  RC0997
  Ctr:  CT519
  Cpn:  CPn0638
  Tpa:  TP0198
  Bbu:  BB0487
  Uur:  UU240
  Mpu:  MYPU_5780
  Mpn:  MPN174
  Mge:  MG160
_______

[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
  Afu:  AF0530
  Hbs:  VNG0887G
  Mac:  MA1584
  Tac:  Ta1055
  Tvo:  TVN0541
  Sce:  YNL088w_1
  Spo:  SPBC1A4.03c_1
  Ecu:  ECU04g0350_1
  Aae:  aq_1026
  Tma:  TM0833
  Fnu:  FN2126
  Dra:  DR0906
  Cac:  CAC0006 CAC1627
  Cgl:  Cgl0005
  Mtu:  Rv0005
  MtC:  MT0005
  Mle:  ML0005
  Lla:  L0283 L0290
  Spy:  SPy0727 SPy0909
  Spn:  SP0806 SP0852
  Sau:  SA0005 SA1188
  Lin:  lin0006 lin1325
  Bsu:  BS_grlB BS_gyrB
  Bha:  BH0006 BH2140
  Syn:  sll2005_1 sll2005_3
  Nos:  all5265
  Eco:  gyrB parE
  EcZ:  ZgyrB ZparE
  Ecs:  ECs3918 ECs4634
  Ype:  YPO0668 YPO4094
  Sty:  STM3181 STM3835
  Buc:  BU010
  Vch:  VC0015 VC2431
  Pae:  PA0004 PA4967
  Hin:  HI0567 HI1528
  Pmu:  PM0370 PM1476
  Xfa:  XF0005 XF1286
  Nme:  NMB0212 NMB1682
  NmA:  NMA0056 NMA1941
  Rso:  RSc0976 RSc3440
  Hpy:  HP0501
  jHp:  jhp0453
  Cje:  Cj0003
  Atu:  AGc19 AGc2992
  Sme:  SMc01018 SMc02782
  Bme:  BMEI1823 BMEII0676
  Mlo:  mll5188 mlr0901
  Ccr:  CC0160 CC1974
  Rpr:  RP227 RP580
  Rco:  RC0309 RC0884
  Ctr:  CT190 CT661
  Cpn:  CPn0275 CPn0715
  Tpa:  TP1006
  Bbu:  BB0036 BB0436
  Uur:  UU081 UU466
  Mpu:  MYPU_3720 MYPU_7390
  Mpn:  MPN003 MPN122
  Mge:  MG003 MG203
_______

[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
  Afu:  AF0465
  Hbs:  VNG0889G
  Mac:  MA1583
  Tac:  Ta1054
  Tvo:  TVN0542
  Sce:  YNL088w_2
  Spo:  SPBC1A4.03c_2
  Ecu:  ECU04g0350_2
  Aae:  aq_980
  Tma:  TM1084
  Fnu:  FN2125
  Dra:  DR1913
  Cac:  CAC0007 CAC1628
  Cgl:  Cgl0012
  Mtu:  Rv0006
  MtC:  MT0006
  Mle:  ML0006_1 ML0006_3
  Lla:  L0282 L0291
  Spy:  SPy0910 SPy1152
  Spn:  SP0855 SP1219
  Sau:  SA0006 SA1189
  Lin:  lin0007 lin1326
  Bsu:  BS_grlA BS_gyrA
  Bha:  BH0007 BH2139
  Syn:  sll1941 slr0417
  Nos:  all0441 all0860
  Eco:  gyrA parC
  EcZ:  ZgyrA ZparC
  Ecs:  ECs3114 ECs3903
  Ype:  YPO0671 YPO1216
  Sty:  STM2272 STM3174
  Buc:  BU180
  Vch:  VC1258 VC2430
  Pae:  PA3168 PA4964
  Hin:  HI1264 HI1529
  Pmu:  PM0369 PM0841
  Xfa:  XF1353 XF2552
  Nme:  NMB1384 NMB1605
  NmA:  NMA1599 NMA1802
  Rso:  RSc0901 RSc0978
  Hpy:  HP0701
  jHp:  jhp0641
  Cje:  Cj1027c
  Atu:  AGc2144 AGc2778
  Sme:  SMc01231 SMc01761
  Bme:  BMEI0884 BMEI1200
  Mlo:  mll0732 mlr8360
  Ccr:  CC1566 CC1580
  Rpr:  RP067 RP206
  Rco:  RC0097 RC0273
  Ctr:  CT189 CT660
  Cpn:  CPn0274 CPn0716
  Tpa:  TP0005
  Bbu:  BB0035 BB0435
  Uur:  UU082 UU467
  Mpu:  MYPU_1470 MYPU_3730
  Mpn:  MPN004 MPN123
  Mge:  MG004 MG204
_______

[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
  Afu:  AF2303
  Hbs:  VNG0098G
  Mac:  MA1361 MA3268
  Mja:  MJ0620 MJ1001
  Pho:  PH1721
  Pab:  PAB0290
  Pya:  PAE0645 PAE0948 PAE1240 PAE1818
  Sso:  SSO0159 SSO0645 SSO2346
  Ape:  APE1463
  Dra:  DR2194
  Bha:  BH2598
  Syn:  slr1238
  Nos:  all3859
  Eco:  gshB rimK
  EcZ:  ZgshB ZrimK
  Ecs:  ECs0932 ECs3823
  Ype:  YPO0935
  Sty:  STM0875 STM3095
  Buc:  BU547
  Vch:  VC0468 VC2281 VC2333
  Pae:  PA0407 PA1345 PA1944 PA5197
  Hin:  HI1531
  Pmu:  PM0826
  Xfa:  XF1956
  Nme:  NMB1559
  NmA:  NMA1747
  Rso:  RSc0345
  Atu:  AGc538 AGl1416
  Sme:  SMb21586 SMc00419
  Bme:  BMEI1996
  Mlo:  mll4735 mlr7777
  Ccr:  CC0141
  Mpn:  MPN015 MPN016
  Mge:  MG011 MG012
_______

[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
  Hbs:  VNG1416G
  Mac:  MA3519
  Tac:  Ta0898
  Tvo:  TVN1018
  Pya:  PAE0220
  Sso:  SSO2865
  Sce:  YBR084w_1 YGR204w_1 YKR080w
  Spo:  SPBC1711.04 SPBC2G2.08_1 SPBC839.16_1
  Aae:  aq_1898
  Tma:  TM1767
  Fnu:  FN1488
  Dra:  DR0867
  Cac:  CAC2083
  Cgl:  Cgl0629
  Mtu:  Rv3356c
  MtC:  MT3464
  Mle:  ML0674
  Lla:  L76582
  Spy:  SPy1502
  Spn:  SP0825
  Sau:  SA0915
  Lin:  lin1397
  Bsu:  BS_folD
  Bha:  BH2784
  Syn:  sll0753
  Nos:  alr0212 alr7549
  Eco:  folD
  EcZ:  ZfolD
  Ecs:  ECs0591
  Ype:  YPO2824
  Sty:  STM0542
  Buc:  BU486
  Vch:  VC1942
  Pae:  PA1796
  Hin:  HI0609
  Pmu:  PM1933
  Xfa:  XF2431
  NmA:  NMA0354
  Rso:  RSc1596
  Hpy:  HP0577
  jHp:  jhp0524
  Cje:  Cj0855
  Atu:  AGc1042
  Sme:  SMc02604 SMc03059
  Bme:  BMEII0510
  Mlo:  mll6921 mlr6508
  Ccr:  CC1217
  Rpr:  RP515
  Rco:  RC0636
  Ctr:  CT078
  Cpn:  CPn0335
  Tpa:  TP0732
  Bbu:  BB0026
  Uur:  UU337
  Mpu:  MYPU_2580
  Mpn:  MPN017
  Mge:  MG013
_______

[G] COG0191 Fructose/tagatose bisphosphate aldolase
  Sce:  YKL060c
  Spo:  SPBC19C2.07
  Aae:  aq_1390
  Tma:  TM0273
  Dra:  DR1589
  Cac:  CAC0827 CAC2952
  Cgl:  Cgl2712
  Mtu:  Rv0363c
  MtC:  MT0379
  Mle:  ML0286
  Lla:  L0009
  Spy:  SPy1889
  Spn:  SP0605
  Sau:  SA1927
  Lin:  lin0378 lin2238 lin2239 lin2701
  Bsu:  BS_fbaA BS_iolJ
  Bha:  BH2314 BH3786
  Syn:  sll0018
  Nos:  all4563
  Eco:  agaY fba gatY ydjI
  EcZ:  Z2811 Z4881 Z5687 ZagaY Zfba ZgatY
  Ecs:  ECs2482 ECs2899 ECs3796 ECs4017 ECs4355 ECs5069
  Ype:  YPO0844 YPO0920 YPO3960
  Sty:  STM3068 STM3253 STM3780
  Buc:  BU451
  Vch:  VC0478
  Pae:  PA0555
  Hin:  HI0524
  Pmu:  PM1373 PM1861
  Nme:  NMB1869
  NmA:  NMA0587
  Rso:  RSc0573
  Hpy:  HP0176
  jHp:  jhp0162
  Cje:  Cj0597
  Sme:  SMb20199 SMb21192
  Bme:  BMEII0423
  Mlo:  mll7273
  Ccr:  CC3250
  Tpa:  TP0662
  Bbu:  BB0445
  Uur:  UU596
  Mpu:  MYPU_1100 MYPU_3600
  Mpn:  MPN025
  Mge:  MG023
_______

[H] COG0192 S-adenosylmethionine synthetase
  Sce:  YDR502c YLR180w
  Spo:  SPBC14F5.05c
  Aae:  aq_1154
  Tma:  TM1658
  Fnu:  FN0355
  Dra:  DR0640
  Cac:  CAC2856
  Cgl:  Cgl1565
  Mtu:  Rv1392
  MtC:  MT1437
  Mle:  ML0544
  Lla:  L153408
  Spy:  SPy1359
  Spn:  SP0762
  Sau:  SA1608
  Lin:  lin1773
  Bsu:  BS_metK
  Bha:  BH3300
  Syn:  sll0927
  Nos:  all3244 alr4124
  Eco:  metK
  EcZ:  ZmetK
  Ecs:  ECs3818
  Ype:  YPO0931
  Sty:  STM3090
  Buc:  BU408
  Vch:  VC0472
  Pae:  PA0546
  Hin:  HI1172
  Pmu:  PM1027
  Xfa:  XF0392
  Nme:  NMB1799
  NmA:  NMA0663
  Rso:  RSc0134
  Hpy:  HP0197
  jHp:  jhp0183
  Cje:  Cj1096c
  Atu:  AGc632
  Sme:  SMc01109
  Bme:  BMEI1970
  Mlo:  mlr5545 mlr6115
  Ccr:  CC0050
  Tpa:  TP0794
  Bbu:  BB0376
  Uur:  UU412
  Mpu:  MYPU_7020
  Mpn:  MPN060
  Mge:  MG047
_______

[J] COG0193 Peptidyl-tRNA hydrolase
  Sce:  YHR189w
  Spo:  SPBC2D10.15c
  Aae:  aq_346
  Tma:  TM1626
  Fnu:  FN1597
  Dra:  DR2372
  Cac:  CAC3217
  Cgl:  Cgl0911 Cgl0914
  Mtu:  Rv1014c
  MtC:  MT1042
  Mle:  ML0244
  Lla:  L0365
  Spy:  SPy0007
  Spn:  SP0005
  Sau:  SA0460
  Lin:  lin0245
  Bsu:  BS_spoVC
  Bha:  BH0068
  Syn:  slr0922
  Nos:  all0844
  Eco:  pth
  EcZ:  Zpth
  Ecs:  ECs1709
  Ype:  YPO2011
  Sty:  STM1783
  Buc:  BU190
  Vch:  VC2184
  Pae:  PA4672
  Hin:  HI0394
  Pmu:  PM0164
  Xfa:  XF2642
  Nme:  NMB0795
  NmA:  NMA1004
  Rso:  RSc0393
  Hpy:  HP1497
  jHp:  jhp1390
  Cje:  Cj0312
  Atu:  AGc4055
  Sme:  SMc02693
  Bme:  BMEI0480
  Mlo:  mlr2694
  Ccr:  CC0484
  Rpr:  RP605
  Rco:  RC0931
  Ctr:  CT800
  Cpn:  CPn0950
  Tpa:  TP1011
  Bbu:  BB0787
  Uur:  UU078
  Mpu:  MYPU_7810
  Mpn:  MPN221
  Mge:  MG083
_______

[F] COG0194 Guanylate kinase
  Sce:  YDR454c
  Spo:  SPBC1198.05
  Ecu:  ECU01g1220
  Aae:  aq_184
  Tma:  TM1689
  Fnu:  FN2033
  Dra:  DR2289
  Cac:  CAC0298 CAC1217 CAC1718
  Cgl:  Cgl1568
  Mtu:  Rv1389
  MtC:  MT1434
  Mle:  ML0541
  Lla:  L149828
  Spy:  SPy1632
  Spn:  SP1738
  Sau:  SA1052
  Lin:  lin1941
  Bsu:  BS_yloD
  Bha:  BH2512
  Syn:  slr1123
  Nos:  alr0106
  Eco:  gmk
  EcZ:  Zgmk
  Ecs:  ECs4523
  Ype:  YPO0040
  Sty:  STM3740
  Buc:  BU434
  Vch:  VC2708
  Pae:  PA5336
  Hin:  HI1743
  Pmu:  PM0922
  Xfa:  XF1503
  Nme:  NMB1661
  NmA:  NMA1919
  Rso:  RSc2155
  Hpy:  HP0321
  jHp:  jhp0304
  Cje:  Cj1177c
  Atu:  AGc2038
  Sme:  SMc00577
  Bme:  BMEI1469
  Mlo:  mlr7857
  Ccr:  CC1681
  Rpr:  RP765
  Rco:  RC1194
  Ctr:  CT030
  Cpn:  CPn0120
  Uur:  UU213
  Mpu:  MYPU_6870
  Mpn:  MPN246
  Mge:  MG107
_______

[K] COG0195 Transcription elongation factor
  Afu:  AF1891
  Hbs:  VNG2661G
  Mac:  MA1260
  Mth:  MTH1054 MTH1217
  Mja:  MJ1045
  Mka:  MK0682 MK0714
  Tac:  Ta0393m
  Tvo:  TVN1179
  Pho:  PH0706 PH1543 PHS019
  Pab:  PAB0426 PAB1492 PAB3393
  Pya:  PAE0669 PAE0705
  Sso:  SSO0172 SSO0220
  Ape:  APE1850
  Aae:  aq_259
  Tma:  TM1777
  Fnu:  FN2022
  Dra:  DR1797
  Cac:  CAC1799
  Cgl:  Cgl1941
  Mtu:  Rv2841c
  MtC:  MT2907
  Mle:  ML1558
  Lla:  L173813
  Spy:  SPy1724
  Spn:  SP0553
  Sau:  SA1109
  Lin:  lin1359
  Bsu:  BS_nusA
  Bha:  BH2416
  Syn:  slr0743
  Nos:  alr3829
  Eco:  nusA
  EcZ:  ZnusA
  Ecs:  ECs4050
  Ype:  YPO3497
  Sty:  STM3287
  Buc:  BU378
  Vch:  VC0642
  Pae:  PA4745
  Hin:  HI1283
  Pmu:  PM0760
  Xfa:  XF0234
  Nme:  NMB1642
  NmA:  NMA1896
  Rso:  RSc1288
  Hpy:  HP1514
  jHp:  jhp1407
  Cje:  Cj0460
  Atu:  AGc136
  Sme:  SMc02912
  Bme:  BMEI1967
  Mlo:  mlr5551
  Ccr:  CC0044
  Rpr:  RP553
  Rco:  RC0817
  Ctr:  CT097
  Cpn:  CPn0316
  Tpa:  TP0892
  Bbu:  BB0800
  Uur:  UU318
  Mpu:  MYPU_2030
  Mpn:  MPN154
  Mge:  MG141
_______

[H] COG0196 FAD synthase
  Sce:  YDR236c
  Spo:  SPCC18.16c
  Aae:  aq_139
  Tma:  TM0857
  Fnu:  FN0707
  Dra:  DR1008
  Cac:  CAC1806
  Cgl:  Cgl1932
  Mtu:  Rv2786c
  MtC:  MT2856
  Mle:  ML0852
  Lla:  L0167
  Spy:  SPy1250
  Spn:  SP1110
  Sau:  SA1115
  Lin:  lin0735 lin1366
  Bsu:  BS_ribC BS_ribR
  Bha:  BH2409
  Syn:  slr1882
  Nos:  alr4848
  Eco:  ribF
  EcZ:  ZribF
  Ecs:  ECs0028
  Ype:  YPO0474
  Sty:  STM0045
  Buc:  BU150
  Vch:  VC0681
  Pae:  PA4561
  Hin:  HI0963
  Pmu:  PM1661
  Xfa:  XF2419
  Nme:  NMB1834
  NmA:  NMA0621
  Rso:  RSc2457
  Hpy:  HP1087
  jHp:  jhp0338
  Cje:  Cj0589
  Atu:  AGc1228
  Sme:  SMc00909
  Bme:  BMEII1044
  Mlo:  mlr8243
  Ccr:  CC0703
  Ctr:  CT093
  Cpn:  CPn0320
  Tpa:  TP0888
  Uur:  UU355
  Mpu:  MYPU_5480
  Mpn:  MPN158
  Mge:  MG145
_______

[J] COG0197 Ribosomal protein L16/L10E
  Afu:  AF1339
  Hbs:  VNG0099G
  Mac:  MA0183
  Mth:  MTH1119
  Mja:  MJ0543
  Mka:  MK0251
  Tac:  Ta1057m
  Tvo:  TVN0539
  Pho:  PH0633
  Pab:  PAB1444
  Pya:  PAE3567
  Sso:  SSO0294
  Ape:  APE0449
  Sce:  YBL038w YLR075w
  Spo:  SPAP7G5.05 SPBC1105.03c SPBC18E5.04
  Ecu:  ECU08g1570
  Aae:  aq_018
  Tma:  TM1493
  Fnu:  FN1638
  Dra:  DR0318
  Cac:  CAC3126
  Cgl:  Cgl0503
  Mtu:  Rv0708
  MtC:  MT0735
  Mle:  ML1856
  Lla:  L0412
  Spy:  SPy0057
  Spn:  SP0216
  Sau:  SA2040
  Lin:  lin2774
  Bsu:  BS_rplP
  Bha:  BH0141
  Syn:  sll1805
  Nos:  all4208
  Eco:  rplP
  EcZ:  ZrplP
  Ecs:  ECs4178
  Ype:  YPO0217
  Sty:  STM3433
  Buc:  BU517
  Vch:  VC2589
  Pae:  PA4256
  Hin:  HI0784
  Pmu:  PM1408
  Xfa:  XF1159
  Nme:  NMB0149
  NmA:  NMA0122
  Rso:  RSc3012
  Hpy:  HP1312
  jHp:  jhp1232
  Cje:  Cj1700c
  Atu:  AGc3544
  Sme:  SMc01302
  Bme:  BMEI0764
  Mlo:  mlr0301
  Ccr:  CC1255
  Rpr:  RP652
  Rco:  RC0999
  Ctr:  CT521
  Cpn:  CPn0640
  Tpa:  TP0196
  Bbu:  BB0485
  Uur:  UU238
  Mpu:  MYPU_5800
  Mpn:  MPN172
  Mge:  MG158
_______

[J] COG0198 Ribosomal protein L24
  Afu:  AF1914
  Hbs:  VNG1702G
  Mac:  MA1083
  Mth:  MTH14
  Mja:  MJ0467
  Mka:  MK1219
  Tac:  Ta1259a
  Tvo:  TVN0336
  Pho:  PH1767
  Pab:  PAB2128
  Pya:  PAE3312
  Sso:  SSO0707
  Ape:  APE0358
  Sce:  YGR034w YLR344w
  Spo:  SPAC4F8.02c SPBC29B5.03c
  Ecu:  ECU08g0370
  Aae:  aq_1653
  Tma:  TM1489
  Fnu:  FN1633
  Dra:  DR0322
  Cac:  CAC3122
  Cgl:  Cgl0509
  Mtu:  Rv0715
  MtC:  MT0741.1
  Mle:  ML1848
  Lla:  L0420
  Spy:  SPy0062
  Spn:  SP0220
  Sau:  SA2036
  Lin:  lin2770
  Bsu:  BS_rplX
  Bha:  BH0145
  Syn:  sll1807
  Nos:  asl4204
  Eco:  rplX
  EcZ:  ZrplX
  Ecs:  ECs4174
  Ype:  YPO0221
  Sty:  STM3429
  Buc:  BU513
  Vch:  VC2585
  Pae:  PA4252
  Hin:  HI0789
  Pmu:  PM1404
  Xfa:  XF1163
  Nme:  NMB0153
  NmA:  NMA0118
  Rso:  RSc3008
  Hpy:  HP1308
  jHp:  jhp1228
  Cje:  Cj1696c
  Atu:  AGc3538
  Sme:  SMc01298
  Bme:  BMEI0768
  Mlo:  mlr0306
  Ccr:  CC1259
  Rpr:  RP648
  Rco:  RC0995
  Ctr:  CT517
  Cpn:  CPn0636
  Tpa:  TP0200
  Bbu:  BB0489
  Uur:  UU242
  Mpu:  MYPU_5760
  Mpn:  MPN176
  Mge:  MG162
_______

[J] COG0199 Ribosomal protein S14
  Afu:  AF1911
  Hbs:  VNG1706G
  Mac:  MA1086
  Mth:  MTH17
  Mja:  MJ0469.1
  Mka:  MK1222
  Tac:  Ta1257
  Tvo:  TVN0339
  Pho:  PHS047
  Pab:  PAB7080
  Pya:  PAE2097
  Sso:  SSO6391
  Ape:  APE0353a
  Sce:  YDL061c YLR388w YPR166c
  Spo:  SPAC23H3.07c SPBC1685.09
  Ecu:  ECU04g0125i
  Aae:  aq_1651a
  Tma:  TM1487
  Fnu:  FN1631
  Dra:  DR2109
  Cac:  CAC3120
  Cgl:  Cgl0843
  Mtu:  Rv0717 Rv2056c
  MtC:  MT0742.1 MT2117
  Mle:  ML1846
  Lla:  L0391 L110165
  Spy:  SPy0064 SPy1871
  Spn:  SP0222
  Sau:  SA1171 SAS079
  Lin:  lin1995 lin2768
  Bsu:  BS_rpsN BS_yhzA
  Bha:  BH0147
  Syn:  slr0628
  Nos:  all3969
  Eco:  rpsN
  EcZ:  ZrpsN
  Ecs:  ECs4172
  Ype:  YPO0222a
  Sty:  STM3427
  Buc:  BU511
  Vch:  VC2583
  Pae:  PA4250
  Hin:  HI0791
  Pmu:  PM1402
  Xfa:  XF1165
  Nme:  NMB0155
  NmA:  NMA0116
  Rso:  RSc3006
  Hpy:  HP1306
  jHp:  jhp1226
  Cje:  Cj1694c
  Atu:  AGc3535
  Sme:  SMc01296
  Bme:  BMEI0770
  Mlo:  mlr0309
  Ccr:  CC1261
  Rpr:  RP646
  Rco:  RC0993
  Ctr:  CT787
  Cpn:  CPn0937
  Tpa:  TP0202
  Bbu:  BB0491
  Uur:  UU244
  Mpu:  MYPU_5740
  Mpn:  MPN178
  Mge:  MG164
_______

[J] COG0200 Ribosomal protein L15
  Afu:  AF1903
  Hbs:  VNG1718G
  Mac:  MA1094
  Mth:  MTH25
  Mja:  MJ0477
  Mka:  MK0027
  Tac:  Ta1249
  Tvo:  TVN0347
  Pho:  PH1755
  Pab:  PAB2138
  Pya:  PAE3436
  Sso:  SSO0696
  Ape:  APE0343
  Sce:  YGL103w YNL284c
  Spo:  SPBC776.11 SPBC9B6.06 SPCC5E4.07
  Ecu:  ECU10g0990
  Aae:  aq_1642
  Tma:  TM1481
  Fnu:  FN1625
  Dra:  DR2115
  Cac:  CAC3114
  Cgl:  Cgl0529
  Mtu:  Rv0723
  MtC:  MT0748
  Mle:  ML1840
  Lla:  L0411
  Spy:  SPy0072
  Spn:  SP0229
  Sau:  SA2029
  Lin:  lin2762
  Bsu:  BS_rplO
  Bha:  BH0153
  Syn:  sll1813
  Nos:  all4198
  Eco:  rplO
  EcZ:  ZrplO
  Ecs:  ECs4166
  Ype:  YPO0228
  Sty:  STM3421
  Buc:  BU505
  Vch:  VC2577
  Pae:  PA4244
  Hin:  HI0797
  Pmu:  PM1396
  Xfa:  XF1171
  Nme:  NMB0161
  NmA:  NMA0110
  Rso:  RSc3000
  Hpy:  HP1301
  jHp:  jhp1221
  Cje:  Cj1689c
  Atu:  AGc3525
  Sme:  SMc01290
  Bme:  BMEI0776
  Mlo:  mlr0318
  Ccr:  CC1267
  Rpr:  RP640
  Rco:  RC0987
  Ctr:  CT511
  Cpn:  CPn0630
  Tpa:  TP0207
  Bbu:  BB0497
  Uur:  UU249
  Mpu:  MYPU_5690
  Mpn:  MPN183
  Mge:  MG169
_______

[U] COG0201 Preprotein translocase subunit SecY
  Afu:  AF1902
  Hbs:  VNG1719G
  Mac:  MA1095
  Mth:  MTH26
  Mja:  MJ0478
  Mka:  MK0026
  Tac:  Ta1248
  Tvo:  TVN0348
  Pho:  PH1754
  Pab:  PAB2139
  Pya:  PAE3435
  Sso:  SSO0695
  Ape:  APE0983
  Sce:  YBR283c YLR378c
  Spo:  SPBC19G7.17 SPBC354.02c
  Ecu:  ECU09g0130
  Aae:  aq_079
  Tma:  TM1480
  Fnu:  FN1624
  Dra:  DR2116
  Cac:  CAC3113
  Cgl:  Cgl0541
  Mtu:  Rv0732
  MtC:  MT0756.1
  Mle:  ML1833
  Lla:  L0333
  Spy:  SPy0073
  Spn:  SP0230 SP1763
  Sau:  SA2028 SA2446
  Lin:  lin2761
  Bsu:  BS_secY
  Bha:  BH0154
  Syn:  sll1814
  Nos:  all4197
  Eco:  secY
  EcZ:  ZprlA
  Ecs:  ECs4165
  Ype:  YPO0229
  Sty:  STM3420
  Buc:  BU504
  Vch:  VC2576
  Pae:  PA4243
  Hin:  HI0798
  Pmu:  PM1395
  Xfa:  XF1172
  Nme:  NMB0162
  NmA:  NMA0109
  Rso:  RSc2999
  Hpy:  HP1300
  jHp:  jhp1220
  Cje:  Cj1688c
  Atu:  AGc3523
  Sme:  SMc01289
  Bme:  BMEI0777
  Mlo:  mlr0321
  Ccr:  CC1268
  Rpr:  RP639
  Rco:  RC0986
  Ctr:  CT510
  Cpn:  CPn0629
  Tpa:  TP0208
  Bbu:  BB0498
  Uur:  UU250
  Mpu:  MYPU_5680
  Mpn:  MPN184
  Mge:  MG170
_______

[K] COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit
  Afu:  AF2282
  Hbs:  VNG1136G
  Mth:  MTH37
  Mja:  MJ0192
  Mka:  MK1474
  Tac:  Ta1030
  Tvo:  TVN0565
  Pho:  PH1637
  Pab:  PAB2410
  Pya:  PAE0671
  Sso:  SSO0071
  Ape:  APE1744
  Sce:  YIL021w YPR110c
  Spo:  SPBC1289.07c SPCC1442.10c
  Ecu:  ECU01g0600 ECU06g0600
  Aae:  aq_070
  Tma:  TM1472
  Fnu:  FN1283
  Dra:  DR2128
  Cac:  CAC3104
  Cgl:  Cgl0549
  Mtu:  Rv3457c
  MtC:  MT3564
  Mle:  ML1957
  Lla:  L0136
  Spy:  SPy0080
  Spn:  SP0236
  Sau:  SA2023
  Lin:  lin2755
  Bsu:  BS_rpoA
  Bha:  BH0162
  Syn:  sll1818
  Nos:  all4191
  Eco:  rpoA
  EcZ:  ZrpoA
  Ecs:  ECs4160
  Ype:  YPO0234
  Sty:  STM3415
  Buc:  BU499
  Vch:  VC2571
  Pae:  PA4238
  Hin:  HI0802
  Pmu:  PM1390
  Xfa:  XF1176
  Nme:  NMB0168
  NmA:  NMA0103
  Rso:  RSc2993
  Hpy:  HP1293
  jHp:  jhp1213
  Cje:  Cj1595
  Atu:  AGc3518
  Sme:  SMc01285
  Bme:  BMEI0781
  Mlo:  mlr0325
  Ccr:  CC1272
  Rpr:  RP635
  Rco:  RC0982
  Ctr:  CT507
  Cpn:  CPn0626
  Tpa:  TP0212
  Bbu:  BB0502
  Uur:  UU257
  Mpu:  MYPU_5610
  Mpn:  MPN191
  Mge:  MG177
_______

[J] COG0203 Ribosomal protein L17
  Sce:  YJL063c
  Spo:  SPBC1271.13
  Aae:  aq_069
  Tma:  TM1471
  Fnu:  FN1282
  Dra:  DR2129
  Cac:  CAC3103
  Cgl:  Cgl0550
  Mtu:  Rv3456c
  MtC:  MT3563
  Mle:  ML1956
  Lla:  L0413
  Spy:  SPy0080a
  Spn:  SP0237
  Sau:  SA2022
  Lin:  lin2754
  Bsu:  BS_rplQ
  Bha:  BH0163
  Syn:  sll1819
  Nos:  all4190
  Eco:  rplQ
  EcZ:  ZrplQ
  Ecs:  ECs4159
  Ype:  YPO0235
  Sty:  STM3414
  Buc:  BU498
  Vch:  VC2570
  Pae:  PA4237
  Hin:  HI0803
  Pmu:  PM1389
  Xfa:  XF1177
  Nme:  NMB0169
  NmA:  NMA0102
  Rso:  RSc2992
  Hpy:  HP1292
  jHp:  jhp1212
  Cje:  Cj1596
  Atu:  AGc3516
  Sme:  SMc01283
  Bme:  BMEI0782
  Mlo:  mlr0326
  Ccr:  CC1273
  Rpr:  RP634
  Rco:  RC0981
  Ctr:  CT506
  Cpn:  CPn0625
  Tpa:  TP0213
  Bbu:  BB0503
  Uur:  UU258
  Mpu:  MYPU_5600
  Mpn:  MPN192
  Mge:  MG178
_______

[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase
  Sce:  YBL011w YBR042c YDL052c YDR018c YKR067w
  Spo:  SPAC1783.02c SPAC1851.02 SPBC1718.04 SPBC428.14
  Ecu:  ECU04g1280 ECU10g0310 ECU10g1260
  Aae:  aq_2058 aq_999_2
  Tma:  TM1693
  Fnu:  FN0867_2 FN1122_2
  Dra:  DR0090 DR2514 DR2587
  Cac:  CAC0688 CAC0965
  Cgl:  Cgl2136 Cgl2830
  Mtu:  Rv0502 Rv1428c Rv1920 Rv2182c Rv2483c_2 Rv3026c Rv3814c
        Rv3815c Rv3816c
  MtC:  MT0523 MT1471 MT1971 MT2237 MT2556_2 MT3110 MT3923
        MT3924 MT3925
  Mle:  ML0087 ML0892 ML1245_2 ML2427
  Lla:  L114325
  Spy:  SPy1410
  Spn:  SP1624
  Sau:  SA1548
  Lin:  lin1688
  Bsu:  BS_yhdO
  Bha:  BH1635
  Syn:  sll1752 sll1848 slr2103
  Nos:  all0850 all4871 alr0234 alr0241 alr0790 alr0981 alr1233
  Eco:  aas_1 plsC yihG
  EcZ:  Z4852 Zaas_1 ZplsC ZyihG
  Ecs:  ECs3693_1 ECs3902 ECs4327 ECs4785
  Ype:  YPO0672 YPO0793_1 YPO2815
  Sty:  STM3010_1 STM3173 STM3998
  Vch:  VC0033 VC1937 VC1966_2 VC2513
  Pae:  PA0005 PA0358 PA0461 PA0834 PA2537 PA3267_2 PA4351
  Hin:  HI0734
  Pmu:  PM0103 PM2001
  Xfa:  XF0197
  Nme:  NMB1294 NMB1698 NMB2034
  NmA:  NMA0404 NMA1504
  Rso:  RSc0522 RSc0680 RSc1564_2 RSp0371 RSp1365
  Hpy:  HP1348
  jHp:  jhp1267
  Cje:  Cj0516 Cj0938c_2
  Atu:  AGc621 AGl2433
  Sme:  SMc00714 SMc01116 SMc02158
  Bme:  BMEI0075 BMEI1977
  Mlo:  mll7824_1 mlr3529 mlr5451_2 mlr5533
  Ccr:  CC1856 CC1900 CC2219
  Rpr:  RP469 RP620_2
  Rco:  RC0711 RC0962_2
  Ctr:  CT453 CT775
  Cpn:  CPn0569 CPn0921
  Tpa:  TP0361
  Bbu:  BB0037
  Uur:  UU344
  Mpu:  MYPU_1140
  Mpn:  MPN299
  Mge:  MG212
_______

[G] COG0205 6-phosphofructokinase
  Sce:  YGR240c YMR205c
  Spo:  SPBC16H5.02
  Ecu:  ECU03g0680
  Aae:  aq_1708
  Tma:  TM0209 TM0289
  Fnu:  FN0410
  Dra:  DR0635
  Cac:  CAC0517
  Cgl:  Cgl1221
  Mtu:  Rv3010c
  MtC:  MT3090
  Mle:  ML1701
  Lla:  L0002
  Spy:  SPy1283
  Spn:  SP0896
  Sau:  SA1521
  Lin:  lin1606
  Bsu:  BS_pfk
  Bha:  BH3164
  Syn:  sll0745 sll1196
  Nos:  all7335 alr1913
  Eco:  pfkA
  EcZ:  ZpfkA
  Ecs:  ECs4841
  Ype:  YPO0078
  Sty:  STM4062
  Buc:  BU305
  Vch:  VC2689
  Hin:  HI0982
  Pmu:  PM0069
  Xfa:  XF0274
  Atu:  AGc3836
  Sme:  SMc01852
  Mlo:  mll5025
  Ctr:  CT205 CT207
  Cpn:  CPn0160 CPn0208
  Tpa:  TP0108 TP0542
  Bbu:  BB0020 BB0727
  Uur:  UU185
  Mpu:  MYPU_6010
  Mpn:  MPN302
  Mge:  MG215
_______

[D] COG0206 Cell division GTPase
  Afu:  AF0535 AF0570 AF1215 AF1729
  Hbs:  VNG0192G VNG0265G VNG0376G VNG1933G VNG6260G
  Mac:  MA0953 MA3876 MA4271
  Mth:  MTH1676
  Mja:  MJ0370 MJ0622
  Mka:  MK0821
  Tac:  Ta0072 Ta0508m Ta0607m
  Tvo:  TVN0027 TVN0657 TVN0792
  Pho:  PH0003 PH0769 PH1335 PH1937
  Pab:  PAB0851 PAB1223 PAB1820 PAB2351
  Aae:  aq_525
  Tma:  TM0836
  Fnu:  FN1451
  Dra:  DR0631
  Cac:  CAC1693
  Cgl:  Cgl2105
  Mtu:  Rv2150c
  MtC:  MT2209
  Mle:  ML0917
  Lla:  L0208
  Spy:  SPy1520
  Spn:  SP1666
  Sau:  SA1029
  Lin:  lin2138
  Bsu:  BS_ftsZ
  Bha:  BH2558
  Syn:  sll1633
  Nos:  alr3858
  Eco:  ftsZ
  EcZ:  ZftsZ
  Ecs:  ECs0099
  Ype:  YPO0560
  Sty:  STM0133
  Buc:  BU212
  Vch:  VC2397
  Pae:  PA4407
  Hin:  HI1143
  Pmu:  PM0147
  Xfa:  XF0802
  Nme:  NMB0427
  NmA:  NMA2057
  Rso:  RSc2839
  Hpy:  HP0979
  jHp:  jhp0913
  Cje:  Cj0696
  Atu:  AGc3784 AGl1286 AGl415
  Sme:  SMc01874 SMc04296
  Bme:  BMEI0585
  Mlo:  mll1546 mlr7256
  Ccr:  CC2540
  Rpr:  RP666
  Rco:  RC1015
  Tpa:  TP0390
  Bbu:  BB0299
  Mpu:  MYPU_4910
  Mpn:  MPN317
  Mge:  MG224
_______

[F] COG0207 Thymidylate synthase
  Afu:  AF2047
  Mac:  MA4543
  Mth:  MTH774
  Mja:  MJ0511
  Mka:  MK1370
  Sce:  YOR074c
  Spo:  SPAC15E1.04_2
  Ecu:  ECU01g0180 ECU01g1430 ECU08g0090
  Fnu:  FN0240
  Dra:  DR2630
  Cac:  CAC3003
  Cgl:  Cgl0821
  Mtu:  Rv2764c
  MtC:  MT2834
  Mle:  ML1519
  Lla:  L182559
  Spy:  SPy0882
  Spn:  SP0669
  Sau:  SA1260
  Lin:  lin1988
  Bsu:  BS_thyA BS_thyB
  Bha:  BH3451
  Eco:  thyA
  EcZ:  ZthyA
  Ecs:  ECs3684
  Ype:  YPO0783
  Sty:  STM3001
  Buc:  BU440
  Vch:  VC0675
  Pae:  PA0342
  Hin:  HI0905
  Pmu:  PM0079
  Xfa:  XF2332
  Nme:  NMB1709
  NmA:  NMA1963
  Rso:  RSc0947
  Atu:  AGc3709
  Sme:  SMc01444
  Bme:  BMEI0608
  Mlo:  mll1467
  Ccr:  CC2124
  Mpu:  MYPU_5380
  Mpn:  MPN320
  Mge:  MG227
_______

[F] COG0208 Ribonucleotide reductase, beta subunit
  Hbs:  VNG2383G
  Sso:  SSO2498
  Sce:  YGR180c YJL026w
  Spo:  SPBC25D12.04
  Ecu:  ECU06g0730
  Aae:  aq_1505_1 aq_1505_3
  Fnu:  FN0103
  Dra:  DRB0109
  Cac:  CAC3276
  Cgl:  Cgl2473
  Mtu:  Rv0233 Rv1981c Rv3048c
  MtC:  MT0244 MT2033 MT3133
  Mle:  ML1731
  Lla:  L0295
  Spy:  SPy0425 SPy1378
  Spn:  SP1180
  Sau:  SA0687
  Lin:  lin2258
  Bsu:  BS_nrdF BS_yosP
  Bha:  BH0502
  Syn:  slr0591
  Eco:  nrdB nrdF
  EcZ:  ZnrdB ZnrdF
  Ecs:  ECs3118 ECs3539
  Ype:  YPO1213 YPO2648
  Sty:  STM2278 STM2808
  Buc:  BU178
  Vch:  VC1255
  Pae:  PA1155
  Hin:  HI1660
  Pmu:  PM0719
  Xfa:  XF1197
  Nme:  NMB1288
  NmA:  NMA1498
  Rso:  RSc2804
  Hpy:  HP0364
  jHp:  jhp1016
  Cje:  Cj0231c
  Atu:  AGc107
  Bme:  BMEII0929
  Ccr:  CC0260
  Rpr:  RP512
  Rco:  RC0651
  Ctr:  CT828
  Cpn:  CPn0985
  Tpa:  TP0053
  Mpu:  MYPU_5390
  Mpn:  MPN322
  Mge:  MG229
_______

[F] COG0209 Ribonucleotide reductase, alpha subunit
  Afu:  AF1664
  Hbs:  VNG1644G VNG2384G
  Mac:  MA1665
  Mth:  MTH652
  Tac:  Ta1475
  Tvo:  TVN0092
  Pho:  PH0363_1 PH0363_3
  Pab:  PAB1057_1 PAB1057_3 PAB1057_5 PAB1057_7
  Pya:  PAE3155
  Sso:  SSO0929
  Ape:  APE2062
  Sce:  YER070w YIL066c
  Spo:  SPAC1F7.05
  Ecu:  ECU10g0920
  Aae:  aq_094
  Tma:  TM0118
  Fnu:  FN0102
  Dra:  DR2374_1 DR2374_3 DRB0108
  Cac:  CAC1047 CAC3277
  Cgl:  Cgl2478
  Mtu:  Rv0570 Rv3051c
  MtC:  MT0596 MT3137
  Mle:  ML1734
  Lla:  L0294
  Spy:  SPy0427 SPy1375
  Spn:  SP1179
  Sau:  SA0686
  Lin:  lin2259
  Bsu:  BS_nrdE BS_yosN BS_yosO_1 BS_yosO_3
  Bha:  BH0501 BH2810
  Syn:  slr1164
  Eco:  nrdA nrdE
  EcZ:  ZnrdA ZnrdE
  Ecs:  ECs3117 ECs3538
  Ype:  YPO1214 YPO2649
  Sty:  STM2277 STM2807
  Buc:  BU179
  Vch:  VC1256
  Pae:  PA1156 PA5496 PA5497
  Hin:  HI1659
  Pmu:  PM0717
  Xfa:  XF1196
  Nme:  NMB1291
  NmA:  NMA1501
  Rso:  RSc0195 RSc2805
  Hpy:  HP0680
  jHp:  jhp0621
  Cje:  Cj0024
  Atu:  AGc106 AGc3183
  Sme:  SMc01237
  Bme:  BMEI0943 BMEII0930
  Mlo:  mll0136
  Ccr:  CC1889 CC3492
  Rpr:  RP513
  Rco:  RC0647
  Ctr:  CT827
  Cpn:  CPn0984
  Tpa:  TP1008
  Mpu:  MYPU_5410
  Mpn:  MPN324
  Mge:  MG231
_______

[L] COG0210 Superfamily I DNA and RNA helicases
  Hbs:  VNG2620G
  Mac:  MA1864 MA1865 MA2140 MA2358 MA2359_1
  Mth:  MTH472_1 MTH511 MTH551
  Tac:  Ta1000
  Tvo:  TVN0739
  Sce:  YJL092w YOL095c
  Spo:  SPAC4H3.05 SPBC336.01
  Aae:  aq_793
  Tma:  TM1238
  Fnu:  FN0524 FN0592
  Dra:  DR1775
  Cac:  CAC1003 CAC1142 CAC2674
  Cgl:  Cgl0714 Cgl0751_1 Cgl0752_1 Cgl0755 Cgl0831 Cgl1717
  Mtu:  Rv0949 Rv3198c Rv3201c_1 Rv3202c_1
  MtC:  MT0976 MT3291 MT3295_1 MT3296_1
  Mle:  ML0153 ML0637
  Lla:  L0287
  Spy:  SPy1267
  Spn:  SP1087
  Sau:  SA1721 SA1832
  Lin:  lin1871
  Bsu:  BS_yerF BS_yjcD
  Bha:  BH0648 BH2834
  Syn:  sll1121 sll1143
  Nos:  all4495 all7353 alr0165
  Eco:  helD rep uvrD
  EcZ:  Z5902 ZhelD Zrep ZuvrD
  Ecs:  ECs1046 ECs4711 ECs4743 ECs5264
  Ype:  YPO1440 YPO3841 YPO3872
  Sty:  STM1075 STM3912 STM3951
  Buc:  BU598
  Vch:  VC0167 VC0190 VCA0717
  Pae:  PA1405 PA5296 PA5443
  Hin:  HI0649 HI1188
  Pmu:  PM0411 PM1059
  Xfa:  XF0050 XF2680
  Nme:  NMB0232 NMB1447
  NmA:  NMA0027 NMA1660
  Rso:  RSc2235 RSc3289 RSp0128_2 RSp1276
  Hpy:  HP0911 HP1478
  jHp:  jhp0847 jhp1371
  Cje:  Cj0777 Cj1101
  Atu:  AGc3725 AGl527 AGpA35
  Sme:  SMa2321 SMc01461
  Bme:  BMEI0596
  Mlo:  mll5898 mlr1503 mlr7946 mlr8166
  Ccr:  CC1528
  Rpr:  RP447
  Rco:  RC0624
  Ctr:  CT608
  Cpn:  CPn0772
  Tpa:  TP0102 TP1028
  Bbu:  BB0344 BB0607
  Uur:  UU501
  Mpu:  MYPU_6980 MYPU_7680
  Mpn:  MPN340 MPN341
  Mge:  MG244
_______

[J] COG0211 Ribosomal protein L27
  Sce:  YNL005c_1
  Spo:  SPBP19A11.05c
  Aae:  aq_1773a
  Tma:  TM1456
  Fnu:  FN1119
  Dra:  DR0085
  Cac:  CAC1259
  Cgl:  Cgl2311
  Mtu:  Rv2441c
  MtC:  MT2517
  Mle:  ML1466
  Lla:  L0421
  Spy:  SPy0822
  Spn:  SP1107
  Sau:  SA1471
  Lin:  lin1575
  Bsu:  BS_rpmA
  Bha:  BH3009
  Syn:  ssr2799
  Nos:  asl0146
  Eco:  rpmA
  EcZ:  ZrpmA
  Ecs:  ECs4064
  Ype:  YPO3511
  Sty:  STM3303
  Buc:  BU388
  Vch:  VC0436
  Pae:  PA4567
  Hin:  HI0879
  Pmu:  PM0348
  Xfa:  XF2423
  Nme:  NMB0324
  NmA:  NMA2163
  Rso:  RSc2821
  Hpy:  HP0297
  jHp:  jhp0282
  Cje:  Cj0095
  Atu:  AGc5052
  Sme:  SMc03772
  Bme:  BMEI0202
  Mlo:  msl4017
  Ccr:  CC0318
  Rpr:  RP752
  Rco:  RC1163
  Ctr:  CT419
  Cpn:  CPn0545
  Tpa:  TP0743
  Bbu:  BB0780
  Uur:  UU210
  Mpu:  MYPU_3290
  Mpn:  MPN327
  Mge:  MG234
_______

[H] COG0212 5-formyltetrahydrofolate cyclo-ligase
  Hbs:  VNG1823C
  Mth:  MTH204_2
  Mka:  MK1605
  Pya:  PAE2536
  Sso:  SSO0456
  Ape:  APE0157
  Sce:  YER183c
  Spo:  SPBC1703.08c
  Aae:  aq_1731
  Fnu:  FN0902
  Dra:  DR1815
  Cac:  CAC1090
  Cgl:  Cgl0856
  Mtu:  Rv0992c
  MtC:  MT1021
  Mle:  ML0181
  Lla:  L172782
  Spn:  SP2095
  Sau:  SA1380
  Lin:  lin1373
  Bsu:  BS_yqgN
  Bha:  BH0836 BH1417
  Syn:  sll1643
  Nos:  all4825
  Eco:  ygfA
  EcZ:  ZygfA
  Ecs:  ECs3782
  Ype:  YPO0913
  Sty:  STM3061
  Vch:  VC2479
  Pae:  PA5228
  Hin:  HI0858
  Pmu:  PM1721
  Xfa:  XF2013
  Nme:  NMB2099
  NmA:  NMA0330
  Rso:  RSc0089
  Hpy:  HP0761
  jHp:  jhp0698
  Cje:  Cj1208
  Atu:  AGl2205
  Sme:  SMc02594 SMc03974
  Bme:  BMEI0315
  Mlo:  mll0364 mll3954
  Ccr:  CC3245
  Rpr:  RP461
  Rco:  RC0694
  Ctr:  CT649
  Cpn:  CPn0763
  Tpa:  TP0694
  Mpn:  MPN348
  Mge:  MG245
_______

[F] COG0213 Thymidine phosphorylase
  Afu:  AF1341 AF1342
  Mac:  MA3242
  Mja:  MJ0667
  Pho:  PH1598
  Pab:  PAB1982
  Tma:  TM1653
  Dra:  DR0443
  Cac:  CAC1546
  Mtu:  Rv3314c
  MtC:  MT3415
  Lla:  L64175
  Spn:  SP0842
  Sau:  SA1938
  Lin:  lin2101
  Bsu:  BS_pdp
  Bha:  BH1533
  Eco:  deoA
  EcZ:  ZdeoA
  Ecs:  ECs5341
  Sty:  STM4568
  Vch:  VC2349
  Rso:  RSc0204
  Atu:  AGc214
  Sme:  SMc04122
  Mlo:  mlr3160
  Uur:  UU368
  Mpu:  MYPU_6460
  Mpn:  MPN064
  Mge:  MG051
_______

[H] COG0214 Pyridoxine biosynthesis enzyme
  Afu:  AF0508
  Hbs:  VNG1793C
  Mac:  MA1567
  Mth:  MTH666
  Mja:  MJ0677
  Mka:  MK1371
  Tac:  Ta0522
  Tvo:  TVN0998
  Pho:  PH1355
  Pab:  PAB0537
  Pya:  PAE2819
  Sso:  SSO0570
  Ape:  APE0246
  Sce:  YFL059w YMR096w YNL333w
  Spo:  SPAC29B12.04
  Tma:  TM0473
  Fnu:  FN1463
  Dra:  DR1367
  Cac:  CAC0594
  Cgl:  Cgl0764
  Mtu:  Rv2606c
  MtC:  MT2681
  Mle:  ML0450
  Spn:  SP1468
  Sau:  SA0477
  Lin:  lin2205
  Bsu:  BS_yaaD
  Bha:  BH0022
  Hin:  HI1647
  Pmu:  PM1232
_______

[J] COG0215 Cysteinyl-tRNA synthetase
  Afu:  AF0411
  Hbs:  VNG1097G
  Mac:  MA0749
  Tac:  Ta1147
  Tvo:  TVN1244
  Pho:  PH0636
  Pab:  PAB0931
  Pya:  PAE0821
  Sso:  SSO2280
  Ape:  APE1592
  Sce:  YNL247w
  Spo:  SPAC29E6.06c
  Ecu:  ECU08g0490
  Aae:  aq_1068
  Tma:  TM0719
  Fnu:  FN1579
  Dra:  DR1670
  Cac:  CAC3177
  Cgl:  Cgl1478 Cgl2589
  Mtu:  Rv2130c Rv3580c
  MtC:  MT2188 MT3686
  Mle:  ML0323 ML1302
  Lla:  L0348
  Spy:  SPy1941
  Spn:  SP0591
  Sau:  SA0488
  Lin:  lin0271
  Bsu:  BS_cysS
  Bha:  BH0111
  Syn:  slr0958
  Nos:  all1092
  Eco:  cysS
  EcZ:  ZcysS
  Ecs:  ECs0588
  Ype:  YPO3073
  Sty:  STM0537
  Buc:  BU487
  Vch:  VC1848
  Pae:  PA1795
  Hin:  HI0078
  Pmu:  PM0945
  Xfa:  XF0995
  Nme:  NMB2083
  NmA:  NMA0347
  Rso:  RSc1167
  Hpy:  HP0886
  jHp:  jhp0818
  Cje:  Cj0802
  Atu:  AGc1982
  Sme:  SMc02551
  Bme:  BMEI1272
  Mlo:  mlr7799
  Ccr:  CC0460
  Rpr:  RP085
  Rco:  RC0111
  Ctr:  CT782
  Cpn:  CPn0932
  Tpa:  TP0091
  Bbu:  BB0599
  Uur:  UU123
  Mpu:  MYPU_1770_2
  Mpn:  MPN356
  Mge:  MG253
_______

[J] COG0216 Protein chain release factor A
  Sce:  YGL143c
  Spo:  SPAC2F7.17
  Aae:  aq_876
  Tma:  TM1363
  Fnu:  FN1332
  Dra:  DR0976
  Cac:  CAC2884
  Cgl:  Cgl1174
  Mtu:  Rv1299
  MtC:  MT1338
  Mle:  ML1134
  Lla:  L0373
  Spy:  SPy1141
  Spn:  SP1020
  Sau:  SA1920
  Lin:  lin2687
  Bsu:  BS_prfA
  Bha:  BH3775
  Syn:  sll1110
  Nos:  all4185
  Eco:  prfA
  EcZ:  ZprfA
  Ecs:  ECs1716
  Ype:  YPO2017
  Sty:  STM1776
  Buc:  BU171
  Vch:  VC2179
  Pae:  PA4665
  Hin:  HI1561
  Pmu:  PM0555
  Xfa:  XF2649
  Nme:  NMB1686
  NmA:  NMA1945
  Rso:  RSc2901
  Hpy:  HP0077
  jHp:  jhp0072
  Cje:  Cj1612
  Atu:  AGl1353
  Sme:  SMc02436
  Bme:  BMEI0191
  Mlo:  mll3435
  Ccr:  CC0856
  Rpr:  RP529
  Rco:  RC0762
  Ctr:  CT023
  Cpn:  CPn0113
  Tpa:  TP0051
  Bbu:  BB0196
  Uur:  UU003
  Mpu:  MYPU_1050
  Mpn:  MPN361
  Mge:  MG258
_______

[S] COG0217 Uncharacterized conserved protein
  Sce:  YGR021w
  Spo:  SPBC8D2.12c SPBPI053
  Aae:  aq_1575
  Tma:  TM0466
  Fnu:  FN1661
  Dra:  DR2548
  Cac:  CAC2295
  Cgl:  Cgl1623
  Mtu:  Rv2603c
  MtC:  MT2678
  Mle:  ML0475
  Lla:  L31280
  Spy:  SPy0316
  Spn:  SP1922
  Sau:  SA0624
  Lin:  lin0388 lin1570
  Bsu:  BS_yeeI BS_yrbC
  Bha:  BH3259
  Syn:  slr0989
  Nos:  all4276
  Eco:  yebC yeeN
  EcZ:  Z3140 ZyebC
  Ecs:  ECs2574 ECs2780
  Ype:  YPO2055
  Sty:  STM1899 STM4499
  Vch:  VCA0006
  Pae:  PA0964
  Hin:  HI0315
  Pmu:  PM0980
  Xfa:  XF1906
  Nme:  NMB1648
  NmA:  NMA1902
  Rso:  RSc2190
  Hpy:  HP0162
  jHp:  jhp0149
  Cje:  Cj1172c
  Atu:  AGl2215
  Sme:  SMc03969
  Bme:  BMEI0321
  Mlo:  mll3945
  Ccr:  CC3243
  Rpr:  RP455
  Rco:  RC0681
  Ctr:  CT457
  Cpn:  CPn0573
  Tpa:  TP0474
  Bbu:  BB0025
  Uur:  UU295
  Mpu:  MYPU_6240
  Mpn:  MPN478
  Mge:  MG332
_______

[R] COG0218 Predicted GTPase
  Afu:  AF1326
  Hbs:  VNG2587C
  Mac:  MA2570
  Mja:  MJ0320
  Mka:  MK0207
  Pho:  PH0200
  Pab:  PAB2234
  Sce:  YDR336w
  Aae:  aq_1815
  Tma:  TM1466
  Fnu:  FN2013
  Cac:  CAC2636
  Lla:  L00157
  Spy:  SPy0886
  Spn:  SP1568
  Sau:  SA1497
  Lin:  lin1593
  Bsu:  BS_ysxC
  Bha:  BH3049
  Eco:  yihA
  EcZ:  ZyihA
  Ecs:  ECs4787
  Ype:  YPO0019
  Sty:  STM4001
  Buc:  BU432
  Vch:  VC0111
  Pae:  PA5492
  Hin:  HI1118
  Pmu:  PM1511
  Xfa:  XF1430
  Nme:  NMB1806
  NmA:  NMA0656
  Rso:  RSc2988
  Hpy:  HP1567
  jHp:  jhp1475
  Cje:  Cj0650
  Atu:  AGc672
  Sme:  SMc01722
  Bme:  BMEII0274
  Mlo:  mlr4815
  Ccr:  CC0766
  Rpr:  RP102
  Rco:  RC0138
  Uur:  UU266
  Mpu:  MYPU_2390
  Mpn:  MPN481
  Mge:  MG335
_______

[J] COG0219 Predicted rRNA methylase (SpoU class)
  Fnu:  FN0809
  Dra:  DR0231
  Cac:  CAC0700
  Cgl:  Cgl0628
  Mtu:  Rv3366
  MtC:  MT3475
  Mle:  ML0419
  Lla:  L161988
  Spy:  SPy0371
  Spn:  SP0486
  Sau:  SA1672
  Bsu:  BS_cspR
  Bha:  BH1023
  Syn:  slr0992
  Nos:  alr3352
  Eco:  yibK
  EcZ:  ZyibK
  Ecs:  ECs4484
  Ype:  YPO0071
  Sty:  STM3695
  Vch:  VC2695 VCA0627
  Pae:  PA5127
  Hin:  HI0766
  Pmu:  PM1513
  Xfa:  XF1972
  Nme:  NMB0268
  NmA:  NMA2218
  Rso:  RSc0358
  Cje:  Cj0904c
  Atu:  AGc4082
  Sme:  SMc00184
  Bme:  BMEI0470
  Mlo:  mlr2718
  Ccr:  CC0471
  Ctr:  CT540
  Cpn:  CPn0660
  Uur:  UU268
  Mpu:  MYPU_3030
  Mpn:  MPN521
  Mge:  MG346
_______

[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase
  Sce:  YDL201w
  Spo:  SPCPB16A4.04c
  Ecu:  ECU11g1520
  Aae:  aq_065
  Tma:  TM0925
  Fnu:  FN1606_2
  Dra:  DR1680
  Cac:  CAC2627
  Cgl:  Cgl2805
  Mtu:  Rv0208c
  MtC:  MT0218
  Mle:  ML2622
  Lla:  L156302
  Spy:  SPy1726
  Spn:  SP0550
  Sau:  SA1569
  Lin:  lin1656
  Bsu:  BS_ytmQ
  Bha:  BH3261
  Syn:  sll1300
  Nos:  alr1845
  Eco:  yggH
  EcZ:  ZyggH
  Ecs:  ECs3836
  Ype:  YPO0951
  Sty:  STM3109
  Buc:  BU551
  Vch:  VC0453
  Pae:  PA0382
  Hin:  HI0340
  Pmu:  PM1317
  Xfa:  XF0784
  Nme:  NMB1328
  NmA:  NMA1542
  Rso:  RSc0703
  Hpy:  HP0747
  jHp:  jhp0684
  Cje:  Cj1278c
  Atu:  AGc634
  Sme:  SMc01108
  Bme:  BMEI1969
  Mlo:  mlr5547
  Ccr:  CC0049
  Rpr:  RP847_2
  Rco:  RC1314_2
  Ctr:  CT829
  Cpn:  CPn0986
  Tpa:  TP0464
  Uur:  UU269
  Mpu:  MYPU_1660
  Mpn:  MPN522
  Mge:  MG347
_______

[C] COG0221 Inorganic pyrophosphatase
  Hbs:  VNG0259G
  Mac:  MA2676
  Mth:  MTH263
  Mka:  MK1450
  Tac:  Ta0399
  Tvo:  TVN1189
  Pho:  PH1907
  Pab:  PAB1104
  Sso:  SSO2390
  Ape:  APE1692
  Sce:  YBR011c YMR267w
  Spo:  SPAC23C11.05 SPAC3A12.02
  Ecu:  ECU10g0340
  Aae:  aq_1547
  Fnu:  FN0099
  Dra:  DR0410 DR1139
  Cac:  CAP0096
  Cgl:  Cgl2644
  Mtu:  Rv3628
  MtC:  MT3730
  Mle:  ML0210
  Lin:  lin0358
  Bha:  BH1604
  Syn:  slr1622
  Nos:  all3570
  Eco:  ppa
  EcZ:  Zppa
  Ecs:  ECs5204
  Ype:  YPO3521
  Sty:  STM4414
  Buc:  BU088
  Vch:  VC2545
  Pae:  PA4031
  Hin:  HI0124
  Pmu:  PM1191
  Xfa:  XF2171
  Nme:  NMB0641
  NmA:  NMA0851
  Rso:  RSc2349
  Hpy:  HP0620
  jHp:  jhp0564
  Cje:  Cj0638c
  Atu:  AGc4822
  Sme:  SMc03239
  Bme:  BMEI0076
  Mlo:  mll4120 mlr8562
  Ccr:  CC0047
  Rpr:  RP589
  Rco:  RC0897
  Ctr:  CT772
  Cpn:  CPn0918
  Uur:  UU315
  Mpu:  MYPU_4700
  Mpn:  MPN528
  Mge:  MG351
_______

[J] COG0222 Ribosomal protein L7/L12
  Sce:  YGL068w
  Spo:  SPCC4B3.09c
  Aae:  aq_1937
  Tma:  TM0457
  Fnu:  FN2037
  Dra:  DR2043
  Cac:  CAC1661 CAC3145
  Cgl:  Cgl0420 Cgl0479
  Mtu:  Rv0652
  MtC:  MT0681
  Mle:  ML1895
  Lla:  L0405
  Spy:  SPy1073
  Spn:  SP1354
  Sau:  SA0498
  Lin:  lin0283
  Bsu:  BS_rplL
  Bha:  BH0122
  Syn:  sll1746 ssl0438
  Nos:  alr5303
  Eco:  rplL
  EcZ:  ZrplL
  Ecs:  ECs4909
  Ype:  YPO3748
  Sty:  STM4152
  Buc:  BU035
  Vch:  VC0327
  Pae:  PA4271
  Hin:  HI0641
  Pmu:  PM1738
  Xfa:  XF2634
  Nme:  NMB0131
  NmA:  NMA0143
  Rso:  RSc3035
  Hpy:  HP1199
  jHp:  jhp1122
  Cje:  Cj0477
  Atu:  AGc3571
  Sme:  SMc01318
  Bme:  BMEI0748
  Mlo:  mlr0275
  Ccr:  CC0497
  Rpr:  RP139
  Rco:  RC0180
  Ctr:  CT316
  Cpn:  CPn0080
  Tpa:  TP0240
  Bbu:  BB0390
  Uur:  UU011
  Mpu:  MYPU_2890
  Mpn:  MPN539
  Mge:  MG362
_______

[J] COG0223 Methionyl-tRNA formyltransferase
  Sce:  YBL013w
  Spo:  SPAC1805.09c
  Aae:  aq_1156_1 aq_2131
  Tma:  TM0528
  Fnu:  FN1489
  Dra:  DR2435
  Cac:  CAC1723
  Cgl:  Cgl1562
  Mtu:  Rv1406 Rv3404c
  MtC:  MT1450 MT3512
  Mle:  ML0552
  Lla:  L0362
  Spy:  SPy1628
  Spn:  SP1735
  Sau:  SA1059
  Lin:  lin1937
  Bsu:  BS_fmt
  Bha:  BH2508
  Syn:  slr0070
  Nos:  alr3460
  Eco:  fmt yfbG_1
  EcZ:  Z3513_1 Zfmt
  Ecs:  ECs3143_1 ECs4153
  Ype:  YPO0241 YPO2420_1
  Sty:  STM2299_1 STM3407
  Buc:  BU497
  Vch:  VC0045
  Pae:  PA0018 PA3554_1
  Hin:  HI0623
  Pmu:  PM1560
  Xfa:  XF0927
  Nme:  NMB0111
  NmA:  NMA0163
  Rso:  RSc0072 RSc1320
  Hpy:  HP1141
  jHp:  jhp1069
  Cje:  Cj0098
  Atu:  AGc642
  Sme:  SMb21235 SMc01100
  Bme:  BMEI1418 BMEII0265
  Mlo:  mll4854
  Ccr:  CC0279
  Rpr:  RP209
  Rco:  RC0279
  Ctr:  CT530
  Cpn:  CPn0649
  Tpa:  TP0756
  Bbu:  BB0064
  Uur:  UU463
  Mpu:  MYPU_0450
  Mpn:  MPN543
  Mge:  MG365
_______

[C] COG0224 F0F1-type ATP synthase, gamma subunit
  Mac:  MA2433
  Sce:  YBR039w
  Spo:  SPBC1734.13
  Aae:  aq_203 aq_2041
  Tma:  TM1611
  Fnu:  FN0359
  Cac:  CAC2866
  Cgl:  Cgl1184
  Mtu:  Rv1309
  MtC:  MT1349
  Mle:  ML1144
  Lla:  L8105
  Spy:  SPy0759
  Spn:  SP1509
  Sau:  SA1906
  Lin:  lin0137 lin2674
  Bsu:  BS_atpG
  Bha:  BH3755
  Syn:  sll1327
  Nos:  all0004
  Eco:  atpG
  EcZ:  ZatpG
  Ecs:  ECs4675
  Ype:  YPO4122
  Sty:  STM3866
  Buc:  BU007
  Vch:  VC2765
  Pae:  PA5555
  Hin:  HI0480
  Pmu:  PM1493
  Xfa:  XF1144
  Nme:  NMB1935
  NmA:  NMA0518
  Rso:  RSc3318
  Hpy:  HP1133
  jHp:  jhp1061
  Cje:  Cj0106
  Atu:  AGc4756
  Sme:  SMc02500
  Bme:  BMEI0250
  Mlo:  mll4063
  Ccr:  CC3448
  Rpr:  RP802
  Rco:  RC1236
  Uur:  UU130
  Mpu:  MYPU_2670
  Mpn:  MPN599
  Mge:  MG400
_______

[O] COG0225 Peptide methionine sulfoxide reductase
  Hbs:  VNG1180G
  Mac:  MA1431
  Mth:  MTH535
  Sso:  SSO1503
  Sce:  YER042w
  Spo:  SPAC29E6.05c
  Fnu:  FN0188_1 FN0803_2
  Dra:  DR1849
  Cac:  CAC0088
  Cgl:  Cgl2861
  Mtu:  Rv0137c
  MtC:  MT0145
  Mle:  ML2647
  Lla:  L193644 L67708
  Spy:  SPy0466 SPy1557_1
  Spn:  SP0660_1 SP1359_1
  Sau:  SA1194 SA1257 SA2453
  Lin:  lin1974
  Bsu:  BS_yppP
  Bha:  BH1448 BH2249
  Syn:  sll1394 slr1795
  Nos:  all1062 alr1675
  Eco:  msrA
  EcZ:  ZmsrA
  Ecs:  ECs5197
  Ype:  YPO3525
  Sty:  STM4408
  Vch:  VC2549 VCA0615_1
  Pae:  PA5018
  Hin:  HI1455_1
  Pmu:  PM0605
  Xfa:  XF1940
  Nme:  NMB0044_2
  NmA:  NMA0290_2
  Rso:  RSc0764
  Hpy:  HP0224_1
  jHp:  jhp0210_1
  Cje:  Cj0637c
  Atu:  AGc197
  Sme:  SMa1896 SMc02467 SMc02885
  Bme:  BMEII0230
  Mlo:  mll1760 mll4530
  Ccr:  CC0994 CC1039
  Tpa:  TP0633_2
  Uur:  UU289
  Mpu:  MYPU_7780
  Mpn:  MPN607
  Mge:  MG408
_______

[P] COG0226 ABC-type phosphate transport system, periplasmic component
  Afu:  AF1356
  Hbs:  VNG0457G VNG2486G
  Mac:  MA0887 MA2349 MA3093
  Mth:  MTH1727 MTH1728
  Mja:  MJ1015
  Mka:  MK1690
  Pab:  PAB2365
  Pya:  PAE1397
  Sso:  SSO0489
  Ape:  APE0045
  Aae:  aq_2016
  Tma:  TM1264
  Dra:  DRA0157
  Cac:  CAC1705
  Cgl:  Cgl2521
  Mtu:  Rv0928 Rv0932c Rv0934
  MtC:  MT0955 MT0959 MT0961
  Mle:  ML2095 ML2192
  Lla:  L158188 L159386
  Spy:  SPy1245
  Spn:  SP1400 SP2084
  Sau:  SA1221
  Lin:  lin2642
  Bsu:  BS_pstS
  Bha:  BH2994
  Syn:  sll0540 sll0679 sll0680 slr1247
  Nos:  all0911 all3054_1 all4575 alr1094 alr4585
  Eco:  pstS
  EcZ:  Z4788 Z4789 ZpstS
  Ecs:  ECs4271 ECs4272 ECs4664
  Ype:  YPO3203 YPO4117
  Sty:  STM3528 STM3857
  Vch:  VC0721 VCA0070 VCA0807
  Pae:  PA0688 PA0689 PA2548_1 PA5369
  Hin:  HI1383m
  Pmu:  PM0436
  Xfa:  XF2141
  Rso:  RSc1529 RSc3310
  Cje:  Cj0613
  Atu:  AGc738
  Sme:  SMc02146
  Bme:  BMEI1989
  Mlo:  mll3723
  Ccr:  CC1515
  Bbu:  BB0215
  Uur:  UU198
  Mpn:  MPN611
  Mge:  MG412
_______

[J] COG0227 Ribosomal protein L28
  Sce:  YMR193w_1
  Spo:  SPBC14C8.10
  Aae:  aq_080
  Tma:  TM0255
  Fnu:  FN1437
  Dra:  DR2524
  Cac:  CAC1733
  Cgl:  Cgl0845
  Mtu:  Rv0105c Rv2058c
  MtC:  MT0114 MT2118 MT3052.2
  Lla:  L0422
  Spy:  SPy1888
  Spn:  SP0441
  Sau:  SA1067
  Lin:  lin1930
  Bsu:  BS_rpmB
  Bha:  BH2500
  Syn:  ssr1604
  Nos:  asl2630
  Eco:  rpmB
  EcZ:  ZrpmB
  Ecs:  ECs4512
  Ype:  YPO0050
  Sty:  STM3728
  Buc:  BU086
  Vch:  VC0218
  Pae:  PA5316
  Hin:  HI0951
  Pmu:  PM1151
  Xfa:  XF1206
  Nme:  NMB0321
  NmA:  NMA2166
  Rso:  RSc2445
  Hpy:  HP0491
  jHp:  jhp0443
  Cje:  Cj0450c
  Sme:  SMc00704
  Bme:  BMEI0056
  Mlo:  mlr3552
  Ccr:  CC0661
  Rpr:  RP099
  Rco:  RC0136
  Ctr:  CT086
  Cpn:  CPn0327
  Tpa:  TP0362
  Bbu:  BB0350
  Uur:  UU209.1
  Mpu:  MYPU_6960
  Mpn:  MPN624
  Mge:  MG426
_______

[J] COG0228 Ribosomal protein S16
  Sce:  YPL013c
  Spo:  SPBC354.06
  Aae:  aq_123
  Tma:  TM1566
  Fnu:  FN1392
  Dra:  DR1294
  Cac:  CAC1755
  Cgl:  Cgl2005
  Mtu:  Rv2909c
  MtC:  MT2977
  Mle:  ML1618
  Lla:  L0393
  Spy:  SPy0840
  Spn:  SP0775
  Sau:  SA1081
  Lin:  lin1911
  Bsu:  BS_rpsP
  Bha:  BH2483
  Syn:  ssr0482
  Nos:  asr1953
  Eco:  rpsP
  EcZ:  ZrpsP
  Ecs:  ECs3472
  Ype:  YPO3295
  Sty:  STM2676
  Buc:  BU394
  Vch:  VC0561
  Pae:  PA3745
  Hin:  HI0204
  Pmu:  PM1294a
  Xfa:  XF0107
  Nme:  NMB0592
  NmA:  NMA0795
  Rso:  RSc0933
  Hpy:  HP1151
  jHp:  jhp1078
  Cje:  Cj0710
  Atu:  AGc4893
  Sme:  SMc03859
  Bme:  BMEI0227
  Mlo:  mlr4381
  Ccr:  CC3652
  Rpr:  RP878
  Rco:  RC1359
  Ctr:  CT026
  Cpn:  CPn0116
  Tpa:  TP0905
  Bbu:  BB0695
  Uur:  UU568
  Mpu:  MYPU_4690
  Mpn:  MPN660
  Mge:  MG446
_______

[O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase
  Hbs:  VNG1404G
  Mac:  MA0449
  Mth:  MTH711
  Sce:  YCL033c
  Spo:  SPBC216.04c
  Fnu:  FN0188_2 FN0803_3
  Dra:  DR1378
  Cac:  CAC1550
  Cgl:  Cgl1852
  Mtu:  Rv2674
  MtC:  MT2748
  Lla:  L192996
  Spy:  SPy1055 SPy1557_2
  Spn:  SP0660_2 SP1359_2
  Sau:  SA1256
  Lin:  lin1973
  Bsu:  BS_yppQ
  Bha:  BH1447
  Syn:  sll1680
  Nos:  alr3901
  Eco:  yeaA
  EcZ:  ZyeaA
  Ecs:  ECs2487
  Ype:  YPO2158
  Sty:  STM1291
  Vch:  VC1236 VC1998 VCA0615_2
  Pae:  PA2827
  Hin:  HI1455_2
  Pmu:  PM0923
  Xfa:  XF0849
  Nme:  NMB0044_3
  NmA:  NMA0290_3
  Rso:  RSc1747
  Hpy:  HP0224_2
  jHp:  jhp0210_2
  Cje:  Cj1112c
  Atu:  AGc1655
  Sme:  SMa1894 SMc00117 SMc01724
  Bme:  BMEII0819
  Mlo:  mll4820 mlr3964
  Ccr:  CC2183
  Tpa:  TP0633_1
  Mpu:  MYPU_5060
  Mpn:  MPN662
  Mge:  MG448
_______

[J] COG0230 Ribosomal protein L34
  Sce:  YDR115w
  Spo:  SPBC21C3.04c
  Aae:  aqq_02
  Tma:  TM1463a
  Dra:  DR2152
  Cac:  CAC3739
  Cgl:  Cgl3039
  Mtu:  Rv3924c
  MtC:  MT4041.1
  Mle:  ML2713
  Lla:  L133770
  Spy:  SPy0250
  Spn:  SP1993
  Sau:  SAS093
  Lin:  lin2988
  Bsu:  BS_rpmH
  Bha:  BH4066
  Syn:  smr0011
  Nos:  asr3412
  Eco:  rpmH
  EcZ:  ZrpmH
  Ecs:  ECs4638
  Ype:  YPO4100
  Sty:  STM3839
  Buc:  BU013
  Vch:  VC0007
  Pae:  PA5570
  Hin:  HI0998
  Pmu:  PM1162
  Xfa:  XF2782
  Nme:  NMB1904
  NmA:  NMA0551
  Rso:  RSc0001
  Hpy:  HP1447
  jHp:  jhp1340
  Cje:  Cj0961c
  Sme:  SMc04434
  Bme:  BMEI0276
  Mlo:  msr4809
  Ccr:  CC0769
  Rpr:  RP610
  Rco:  RC0936
  Ctr:  CT785
  Cpn:  CPn0935
  Tpa:  TP0951
  Bbu:  BB0440
  Uur:  UU604
  Mpu:  MYPU_1540
  Mpn:  MPN682
  Mge:  MG466
_______

[J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
  Afu:  AF0645
  Hbs:  VNG1768G
  Mac:  MA3987
  Mth:  MTH869
  Mja:  MJ1228
  Mka:  MK0739
  Tac:  Ta1059
  Tvo:  TVN0537
  Pho:  PH1381
  Pab:  PAB1854
  Pya:  PAE3337
  Sso:  SSO0970
  Ape:  APE2085
  Sce:  YEL034w YJR047c
  Spo:  SPAC26H5.10c SPBC336.10c
  Ecu:  ECU09g1370
  Aae:  aq_1364
  Tma:  TM1763
  Fnu:  FN0720
  Dra:  DR0119
  Cac:  CAC2094
  Cgl:  Cgl1581
  Mtu:  Rv2534c
  MtC:  MT2609
  Mle:  ML0522
  Lla:  L0377
  Spy:  SPy1821
  Spn:  SP0435
  Sau:  SA1359
  Lin:  lin1392
  Bsu:  BS_efp
  Bha:  BH2799
  Syn:  slr0434
  Nos:  all5058
  Eco:  efp yeiP
  EcZ:  Zefp ZyeiP
  Ecs:  ECs3063 ECs5128
  Ype:  YPO0354 YPO1284
  Sty:  STM2211 STM4334
  Buc:  BU020
  Vch:  VC1209 VC2660
  Pae:  PA2851
  Hin:  HI0328
  Pmu:  PM0100
  Xfa:  XF2203 XF2473
  Nme:  NMB0937
  NmA:  NMA1133
  Rso:  RSc1069
  Hpy:  HP0177
  jHp:  jhp0163
  Cje:  Cj0551
  Atu:  AGc4625
  Sme:  SMc00357
  Bme:  BMEI0327
  Mlo:  mll8261 mlr3919
  Ccr:  CC0721
  Rpr:  RP238
  Rco:  RC0322
  Ctr:  CT122 CT752
  Cpn:  CPn0184 CPn0895
  Tpa:  TP0525
  Bbu:  BB0214
  Uur:  UU298
  Mpu:  MYPU_5130
  Mpn:  MPN029
  Mge:  MG026
_______

[F] COG0232 dGTP triphosphohydrolase
  Dra:  DR1006 DR1808
  Cgl:  Cgl2221
  Mtu:  Rv2344c
  MtC:  MT2409
  Mle:  ML0831
  Lin:  lin2806
  Syn:  sll0398
  Eco:  dgt
  EcZ:  Zdgt
  Ecs:  ECs0164
  Ype:  YPO3383
  Sty:  STM0208
  Vch:  VC1979 VCA0308
  Pae:  PA1124 PA3043
  Hin:  HI1299
  Pmu:  PM0878
  Rso:  RSc2968
  Atu:  AGc3147
  Sme:  SMc02074
  Bme:  BMEI1090
  Mlo:  mll1093 mlr6429
  Ccr:  CC2008
  Rpr:  RP064
  Rco:  RC0094
_______

[J] COG0233 Ribosome recycling factor
  Sce:  YHR038w
  Spo:  SPBC1709.09
  Aae:  aq_712
  Tma:  TM1399
  Fnu:  FN1623
  Dra:  DR1510
  Cac:  CAC1790
  Cgl:  Cgl1976
  Mtu:  Rv2882c
  MtC:  MT2949
  Mle:  ML1590
  Lla:  L0367
  Spy:  SPy0463
  Spn:  SP0945
  Sau:  SA1102
  Lin:  lin1351
  Bsu:  BS_frr
  Bha:  BH2424
  Syn:  sll0145
  Nos:  alr1208
  Eco:  frr
  EcZ:  Zfrr
  Ecs:  ECs0174
  Ype:  YPO1047
  Sty:  STM0219
  Buc:  BU234
  Vch:  VC2257
  Pae:  PA3653
  Hin:  HI0808
  Pmu:  PM1987
  Xfa:  XF1051
  Nme:  NMB0187
  NmA:  NMA0080
  Rso:  RSc1407
  Hpy:  HP1256
  jHp:  jhp1177
  Cje:  Cj0234c
  Atu:  AGc2546
  Sme:  SMc02098
  Bme:  BMEI0826
  Mlo:  mll0642
  Ccr:  CC1920
  Rpr:  RP154
  Rco:  RC0197
  Ctr:  CT677
  Cpn:  CPn0699
  Tpa:  TP0604
  Bbu:  BB0121
  Uur:  UU512
  Mpu:  MYPU_2190
  Mpn:  MPN636
  Mge:  MG435
_______

[O] COG0234 Co-chaperonin GroES (HSP10)
  Mac:  MA0630
  Sce:  YOR020c
  Spo:  SPCC550.06c
  Aae:  aq_2199
  Tma:  TM0505
  Fnu:  FN0676
  Dra:  DR0606
  Cac:  CAC2704
  Cgl:  Cgl0581
  Mtu:  Rv3418c
  MtC:  MT3527
  Mle:  ML0380
  Lla:  L198515
  Spy:  SPy2072
  Spn:  SP1907
  Sau:  SA1837
  Lin:  lin2175
  Bsu:  BS_groES
  Bha:  BH0561
  Syn:  slr2075
  Nos:  alr3661
  Eco:  groS
  EcZ:  ZmopB
  Ecs:  ECs5123
  Ype:  YPO0350
  Sty:  STM4329
  Buc:  BU018
  Vch:  VC2665 VCA0819
  Pae:  PA4386
  Hin:  HI0542
  Pmu:  PM1106
  Xfa:  XF0616
  Nme:  NMB1973
  NmA:  NMA0472
  Rso:  RSc0641
  Hpy:  HP0011
  jHp:  jhp0009
  Cje:  Cj1220
  Atu:  AGc1221
  Sme:  SMa0125 SMa0745 SMc00912
  Bme:  BMEII1047
  Mlo:  mll2233 mll8202 mlr2393 msl5812 msr9341
  Ccr:  CC0686
  Rpr:  RP627
  Rco:  RC0969
  Ctr:  CT111
  Cpn:  CPn0135
  Tpa:  TP1013
  Bbu:  BB0741
  Mpn:  MPN574
  Mge:  MG393
_______

[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
  Afu:  AF0480
  Hbs:  VNG1201G
  Mac:  MA0263
  Mth:  MTH1406
  Mja:  MJ1418
  Mka:  MK1585
  Tvo:  TVN1450
  Pho:  PH0191
  Pab:  PAB0117
  Pya:  PAE2158
  Ape:  APE1657
  Sce:  YJR024c
  Spo:  SPAC20H4.05c SPAC9.06c SPBC1289.14 SPBC359.06
  Aae:  aq_1658 aq_1979
  Tma:  TM0283 TM1072
  Fnu:  FN1417
  Cac:  CAC1341
  Mtu:  Rv0727c
  MtC:  MT0752
  Mle:  ML0837
  Spy:  SPy0179
  Spn:  SP2033 SP2166
  Lin:  lin2198 lin2979
  Bsu:  BS_araD BS_ykrY
  Bha:  BH1871 BH1952
  Nos:  all1723
  Eco:  araD fucA rhaD sgaE sgbE ygbL
  EcZ:  ZaraD ZfucA ZrhaD ZsgaE
  Ecs:  ECs0065 ECs3660 ECs4829 ECs5174
  Ype:  YPO0328 YPO1236 YPO2230 YPO3326
  Sty:  STM0101 STM2916 STM2974 STM3677 STM4045 STM4388
  Vch:  VCA0244
  Pae:  PA0224 PA1683 PA3430
  Hin:  HI0611 HI1012 HI1025
  Pmu:  PM1244 PM1364
  Xfa:  XF2209
  Rso:  RSc0806 RSc1767 RSp0889
  Hpy:  HP0112
  jHp:  jhp0104
  Sme:  SMa1976 SMb20490 SMb20666 SMc01621
  Bme:  BMEII0189 BMEII1095
  Mlo:  mll4933 mlr6791
  Ccr:  CC1201
  Rpr:  RP493
  Rco:  RC0678
  Mpu:  MYPU_5990
  Mpn:  MPN498
_______

[IQ] COG0236 Acyl carrier protein
  Mac:  MA1027 MA3718
  Sce:  YKL192c
  Spo:  SPAC4H3.09
  Aae:  aq_1717a
  Tma:  TM0175 TM0662
  Fnu:  FN0150
  Dra:  DR1942
  Cac:  CAC1747 CAC2017 CAC2198 CAC3313 CAC3577 CAP0139
  Cgl:  Cgl2202
  Mtu:  Rv0033 Rv1344 Rv2244
  MtC:  MT0038 MT1385 MT2304
  Mle:  ML1654
  Lla:  L0183 L90005
  Spy:  SPy0023 SPy1310 SPy1753
  Spn:  SP0038 SP0418 SP2174
  Sau:  SA0795 SA1075
  Lin:  lin0971 lin1920
  Bsu:  BS_acpA BS_dltC BS_pksDa
  Bha:  BH1841 BH1846 BH2490
  Syn:  ssl2084
  Nos:  alr2678_3 alr4059 alr5357_1 asl1650 asr3342
  Eco:  acpP
  EcZ:  Z1547 Z4853 Z4854 ZacpP
  Ecs:  ECs1287 ECs1472 ECs4328 ECs4329
  Ype:  YPO1462 YPO1600
  Sty:  STM1196 STM2881
  Buc:  BU352
  Vch:  VC0248 VC2020
  Pae:  PA1869 PA2966 PA3334
  Hin:  HI0154
  Pmu:  PM1917
  Xfa:  XF0672 XF0771
  Nme:  NMB0220 NMB1696 NMB1697
  NmA:  NMA0043
  Rso:  RSc0434 RSc1053 RSp0369 RSp0370 RSp0783 RSp0791 RSp1659
  Hpy:  HP0559 HP0962
  jHp:  jhp0506
  Cje:  Cj0441 Cj1299 Cj1304 Cj1308
  Atu:  AGc2943 AGc3076 AGc4658
  Sme:  SMa0852 SMb20651 SMc00573 SMc01553 SMc04278
  Bme:  BMEI1111 BMEI1475
  Mlo:  mlr1174 mlr4951 mlr5821 msl6741 msr7851
  Ccr:  CC1163 CC1677
  Rpr:  RP763
  Rco:  RC1185
  Ctr:  CT236
  Cpn:  CPn0295
  Tpa:  TP0808
  Bbu:  BB0704
  Uur:  UU506
  Mpu:  MYPU_3580
  Mpn:  MPN406
  Mge:  MG287
_______

[H] COG0237 Dephospho-CoA kinase
  Afu:  AF1395_1
  Hbs:  VNG2452C
  Mac:  MA4660
  Mth:  MTH434
  Mja:  MJ1399
  Mka:  MK0400
  Tac:  Ta0179
  Tvo:  TVN0276
  Pho:  PH0515 PH1008
  Pab:  PAB1012 PAB1725
  Pya:  PAE1629
  Sso:  SSO1041
  Ape:  APE1753
  Sce:  YDR196c
  Spo:  SPCC14G10.01
  Ecu:  ECU11g0300
  Aae:  aq_1985
  Tma:  TM1387
  Fnu:  FN1932
  Dra:  DR1892
  Cac:  CAC1099
  Cgl:  Cgl1325
  Mtu:  Rv1631_1
  MtC:  MT1667_1
  Mle:  ML1383_1
  Lla:  L59930
  Spy:  SPy0498
  Spn:  SP0971
  Sau:  SA1511
  Lin:  lin1598
  Bsu:  BS_ytaG
  Bha:  BH3150
  Syn:  slr0553
  Nos:  all1754
  Eco:  coaE
  EcZ:  ZcoaE
  Ecs:  ECs0107
  Ype:  YPO3430
  Sty:  STM0140
  Buc:  BU203
  Vch:  VC2427
  Pae:  PA4529
  Hin:  HI0890m
  Pmu:  PM0088
  Xfa:  XF2536
  Nme:  NMB0331
  NmA:  NMA2157
  Rso:  RSc2828
  Hpy:  HP0831
  jHp:  jhp0770
  Cje:  Cj1530
  Atu:  AGc5
  Sme:  SMc02790
  Bme:  BMEI2057
  Mlo:  mlr4493
  Ccr:  CC0004
  Rpr:  RP731
  Rco:  RC1111
  Ctr:  CT492
  Cpn:  CPn0611
  Tpa:  TP0296
  Bbu:  BB0547
  Mpu:  MYPU_7210
  Mpn:  MPN382
  Mge:  MG264
_______

[J] COG0238 Ribosomal protein S18
  Sce:  YER050c
  Spo:  SPCC18B5.04
  Aae:  aq_064a
  Tma:  TM0605
  Fnu:  FN1656
  Dra:  DR0101
  Cac:  CAC3722
  Cgl:  Cgl0842
  Mtu:  Rv0055 Rv2055c
  MtC:  MT0061 MT2116
  Mle:  ML2683
  Lla:  L0395
  Spy:  SPy1829
  Spn:  SP1539
  Sau:  SA0354
  Lin:  lin0039
  Bsu:  BS_rpsR
  Bha:  BH4048
  Syn:  ssr1399
  Nos:  asl4451
  Eco:  rpsR
  EcZ:  ZrpsR
  Ecs:  ECs5178
  Ype:  YPO3537
  Sty:  STM4393
  Buc:  BU563
  Vch:  VC0368
  Pae:  PA4934
  Hin:  HI0545
  Pmu:  PM1178
  Xfa:  XF2560
  Nme:  NMB1321
  NmA:  NMA1535
  Rso:  RSc1309
  Hpy:  HP1244
  jHp:  jhp1165
  Cje:  Cj1072
  Sme:  SMc00567
  Bme:  BMEI1481
  Mlo:  msl7844
  Ccr:  CC1668
  Rpr:  RP040
  Rco:  RC0065
  Ctr:  CT802
  Cpn:  CPn0952
  Tpa:  TP0061
  Bbu:  BB0113
  Uur:  UU552
  Mpu:  MYPU_6090
  Mpn:  MPN230
  Mge:  MG092
_______

[D] COG0239 Integral membrane protein possibly involved in chromosome condensation
  Hbs:  VNG1919H VNG1921H
  Mac:  MA3934 MA4088 MA4089
  Mja:  MJ1523
  Mka:  MK1211
  Pho:  PH1502
  Pab:  PAB1925
  Sce:  YOR390w_2 YPL279c_2
  Spo:  SPAC977.11_2
  Aae:  aq_449
  Tma:  TM0020
  Dra:  DR0185
  Cac:  CAC1586 CAC1587
  Cgl:  Cgl2491
  Mtu:  Rv3069 Rv3070
  MtC:  MT3153.1 MT3154
  Spn:  SP1294 SP1295
  Sau:  SA1601 SA1602
  Lin:  lin2187 lin2188
  Bsu:  BS_yhdU BS_yhdV
  Bha:  BH2986 BH2987
  Syn:  sll1192
  Nos:  alr3340
  Eco:  crcB
  EcZ:  ZcrcB
  Ecs:  ECs0663
  Ype:  YPO2596 YPO2676 YPO2677
  Sty:  STM0630
  Vch:  VC0060
  Pae:  PA4383
  Hin:  HI0597.1
  Pmu:  PM1630
  Xfa:  XF1454
  Nme:  NMB1065
  NmA:  NMA1264
  Rso:  RSc1333
  Hpy:  HP1225
  jHp:  jhp1146
  Cje:  Cj0517
  Atu:  AGc2712
  Sme:  SMc01274
  Bme:  BMEI0633 BMEI0634_1 BMEII0469 BMEII0470
  Mlo:  mlr0333
  Ccr:  CC1981
_______

[C] COG0240 Glycerol-3-phosphate dehydrogenase
  Afu:  AF0871
  Mth:  MTH368
  Sce:  YDL022w YOL059w
  Spo:  SPAC23D3.04c SPBC215.05
  Ecu:  ECU05g0270
  Aae:  aq_1634
  Tma:  TM0378
  Fnu:  FN0906
  Dra:  DR2621
  Cac:  CAC1712
  Cgl:  Cgl1288
  Mtu:  Rv0564c Rv2982c
  MtC:  MT0590 MT3060
  Mle:  ML1679
  Lla:  L0016
  Spy:  SPy0226
  Spn:  SP2091
  Sau:  SA1306
  Lin:  lin2050
  Bsu:  BS_gpsA
  Bha:  BH1640
  Syn:  slr1755
  Nos:  all1693
  Eco:  gpsA
  EcZ:  ZgpsA
  Ecs:  ECs4486
  Ype:  YPO0068
  Sty:  STM3700
  Vch:  VC2651
  Pae:  PA1614
  Hin:  HI0605
  Pmu:  PM1431
  Xfa:  XF1802
  Nme:  NMB2060
  NmA:  NMA0375
  Rso:  RSc0357
  Hpy:  HP0961
  jHp:  jhp0895
  Cje:  Cj1196c
  Atu:  AGc4804
  Sme:  SMc03229
  Bme:  BMEI0174
  Mlo:  mlr4225
  Ccr:  CC0070
  Rpr:  RP442
  Rco:  RC0615
  Ctr:  CT714
  Cpn:  CPn0855
  Tpa:  TP1009
  Bbu:  BB0368
  Uur:  UU382
  Mpu:  MYPU_1240
_______

[E] COG0241 Histidinol phosphatase and related phosphatases
  Mja:  MJ0015
  Tac:  Ta0544
  Tvo:  TVN0598
  Sce:  YMR156c
  Spo:  SPAC23C11.04c
  Ecu:  ECU07g0160
  Fnu:  FN1461_1
  Cac:  CAC3053
  Mtu:  Rv0114
  MtC:  MT0122_2
  Syn:  sll0084
  Eco:  hisB_1 yaeD
  EcZ:  ZhisB_1 ZyaeD
  Ecs:  ECs0202 ECs2823_1
  Ype:  YPO1074 YPO1546_1
  Sty:  STM0248 STM2074_1
  Buc:  BU102_1
  Vch:  VC0908 VC1135_1
  Pae:  PA0006
  Hin:  HI0471_1 HI0621.1
  Pmu:  PM1200_1 PM1727
  Xfa:  XF2217_1
  Nme:  NMB2033
  NmA:  NMA0405
  Rso:  RSc0523
  Hpy:  HP0860
  jHp:  jhp0794
  Cje:  Cj1152c Cj1599_1
  Mlo:  mll2559
  Ccr:  CC3616
_______

[J] COG0242 N-formylmethionyl-tRNA deformylase
  Aae:  aq_579
  Tma:  TM1661
  Fnu:  FN1157
  Dra:  DR2434
  Cac:  CAC1722 CAC2474
  Cgl:  Cgl1563 Cgl2682
  Mtu:  Rv0429c
  MtC:  MT0444
  Mle:  ML1929
  Lla:  L154885
  Spy:  SPy0870 SPy1958
  Spn:  SP1456 SP1549
  Sau:  SA0942 SA1058
  Lin:  lin1043
  Bsu:  BS_def BS_ykrB
  Bha:  BH2658
  Syn:  slr1549
  Nos:  all2007 alr3079
  Eco:  def
  EcZ:  Zdef
  Ecs:  ECs4152
  Ype:  YPO0242
  Sty:  STM3406
  Buc:  BU496
  Vch:  VC0046 VCA0150
  Pae:  PA0019 PA1122
  Hin:  HI0622
  Pmu:  PM1559
  Xfa:  XF0926
  Nme:  NMB0110
  NmA:  NMA0164
  Rso:  RSc0070 RSc1399
  Hpy:  HP0793
  jHp:  jhp0729
  Cje:  Cj0191c
  Atu:  AGc2856 AGc640
  Sme:  SMc01101 SMc01262
  Bme:  BMEII0264 BMEII0812
  Mlo:  mll4855
  Ccr:  CC0272
  Rpr:  RP208
  Rco:  RC0080 RC0278 RC0674
  Ctr:  CT353
  Cpn:  CPn1067
  Tpa:  TP0757
  Bbu:  BB0065
  Uur:  UU465
  Mpu:  MYPU_6890
  Mpn:  MPN245
  Mge:  MG106
_______

[C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing
  Afu:  AF0159 AF0176 AF1203 AF1651 AF2384
  Hbs:  VNG0829G
  Mth:  MTH1140 MTH1567
  Mja:  MJ0006 MJ1353m
  Mka:  MK0321
  Tac:  Ta0045m
  Tvo:  TVN0002
  Pho:  PH1353 PH1359
  Pab:  PAB0532 PAB1389 PAB2442
  Pya:  PAE1265 PAE2002 PAE2662 PAE2839 PAE2840 PAE2859
  Sso:  SSO1029 SSO1580 SSO2795 SSO3191
  Ape:  APE2556 APE2610
  Aae:  aq_1039 aq_1234 aq_217
  Dra:  DR0397
  Cgl:  Cgl0516
  Mtu:  Rv0197 Rv1442 Rv2900c
  MtC:  MT0207 MT1487 MT2968
  Bsu:  BS_nasC BS_yoaE BS_yyaE
  Bha:  BH0615 BH2530 BH2853
  Syn:  sll1454
  Nos:  all1061 alr0612
  Eco:  bisC bisZ dmsA fdhF fdnG fdoG napA
        torA ydeP ynfE ynfF
  EcZ:  Z2207 Z2575 Z2576 Z3785 ZbisC ZbisZ ZdmsA
        ZfdhF ZfdnG ZfdoG ZnapA ZtorA
  Ecs:  ECs0979 ECs1152 ECs2078 ECs2106 ECs2293 ECs2294 ECs2582
        ECs3095 ECs3384 ECs4436 ECs4820 ECs5061
  Ype:  YPO0344 YPO0794 YPO2965 YPO3038 YPO3325
  Sty:  STM0611 STM0964 STM1383 STM1498 STM1499 STM1570 STM2065
        STM2259 STM2530 STM3644 STM3822 STM4037 STM4285 STM4305
  Vch:  VC1692 VC1950 VCA0678
  Pae:  PA1174 PA1779_1 PA2714 PA3534 PA5181
  Hin:  HI0006m HI0344 HI0643 HI1047
  Pmu:  PM0408 PM0409 PM0721 PM1594 PM1754 PM1793
  Rso:  RSc2373 RSc2859 RSp0070 RSp1048 RSp1219
  Hpy:  HP0407
  jHp:  jhp0974
  Cje:  Cj0264c Cj0780 Cj1511c
  Atu:  AGc2104 AGc2854 AGl1895 AGl213 AGl917
  Sme:  SMa0002 SMa1236 SMb20986 SMc00609
  Bme:  BMEI1243 BMEII0378
  Mlo:  mll5614 mll9633 mlr2864 mlr7933
  Ccr:  CC0617 CC1243
_______

[J] COG0244 Ribosomal protein L10
  Afu:  AF1491
  Hbs:  VNG1104G
  Mac:  MA4276
  Mth:  MTH1681
  Mja:  MJ0509
  Mka:  MK0826
  Tac:  Ta0359
  Tvo:  TVN0421
  Pho:  PH1999
  Pab:  PAB1167
  Pya:  PAE3107
  Sso:  SSO0344
  Ape:  APE2171
  Sce:  YDL202w YKL009w YLR340w
  Spo:  SPAC31A2.03 SPBC11G11.03 SPCC18.14c
  Ecu:  ECU07g0820
  Aae:  aq_1936
  Tma:  TM0456
  Fnu:  FN2038
  Dra:  DR2044
  Cac:  CAC3146
  Cgl:  Cgl0478
  Mtu:  Rv0651
  MtC:  MT0680
  Mle:  ML1896
  Lla:  L0407
  Spy:  SPy1072
  Spn:  SP1355
  Sau:  SA0497
  Lin:  lin0282
  Bsu:  BS_rplJ
  Bha:  BH0121
  Syn:  sll1745
  Nos:  alr5302
  Eco:  rplJ
  EcZ:  ZrplJ
  Ecs:  ECs4908
  Ype:  YPO3749
  Sty:  STM4151
  Buc:  BU036
  Vch:  VC0326
  Pae:  PA4272
  Hin:  HI0640
  Pmu:  PM1739
  Xfa:  XF2635
  Nme:  NMB0130
  NmA:  NMA0144
  Rso:  RSc3036
  Hpy:  HP1200
  jHp:  jhp1123
  Cje:  Cj0476
  Atu:  AGc3572
  Sme:  SMc01319
  Bme:  BMEI0747
  Mlo:  mlr0274
  Ccr:  CC0496
  Rpr:  RP138
  Rco:  RC0179
  Ctr:  CT317
  Cpn:  CPn0079
  Tpa:  TP0239
  Bbu:  BB0391
  Uur:  UU010
  Mpu:  MYPU_2900
  Mpn:  MPN538
  Mge:  MG361
_______

[I] COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
  Aae:  aq_957
  Tma:  TM0647
  Fnu:  FN1788
  Dra:  DR0230
  Cac:  CAC0434
  Cgl:  Cgl2606
  Mtu:  Rv3581c
  MtC:  MT3687
  Mle:  ML0322
  Lin:  lin0268
  Bsu:  BS_yacN
  Bha:  BH0108
  Syn:  slr1542
  Nos:  alr3883
  Eco:  ygbB
  EcZ:  ZygbB
  Ecs:  ECs3600
  Ype:  YPO3360
  Sty:  STM2929
  Buc:  BU419
  Vch:  VC0529
  Pae:  PA3627
  Hin:  HI0671
  Pmu:  PM1609
  Xfa:  XF1294
  Nme:  NMB1512
  NmA:  NMA1712
  Rso:  RSc1644
  Hpy:  HP1020_2
  jHp:  jhp0404_2
  Cje:  Cj1607_2
  Atu:  AGc2659_2
  Sme:  SMc01040_2
  Bme:  BMEI0863_2
  Mlo:  mll0395_2
  Ccr:  CC1738_2
  Ctr:  CT434
  Cpn:  CPn0547
  Tpa:  TP0512_2
  Mpn:  MPN673
  Mge:  MG459
_______

[G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases
  Sce:  YEL070w YNR073c
  Tma:  TM0068
  Cac:  CAC0157 CAC0695
  Cgl:  Cgl0110
  Lla:  L0241 L33416
  Spn:  SP0397
  Sau:  SA1963
  Bsu:  BS_mtlD BS_yjmI
  Bha:  BH0492 BH3851
  Eco:  mtlD uxaB uxuB ydfI yeiQ
  EcZ:  ZmtlD ZuxaB ZuxuB ZydfI ZyeiQ
  Ecs:  ECs2128 ECs2151 ECs3064 ECs4476 ECs5282
  Ype:  YPO0580 YPO1280 YPO2325 YPO4067
  Sty:  STM1508 STM3083 STM3136 STM3686
  Buc:  BU571
  Vch:  VCA1046
  Pae:  PA2342
  Pmu:  PM1062
  Rso:  RSc2129
  Atu:  AGc5101 AGl2604 AGl830
  Sme:  SMb20749 SMc01501
  Bme:  BMEII0478
  Mlo:  mll4920 mlr1886 mlr4057
  Ccr:  CC1487
  Mpu:  MYPU_7500
  Mpn:  MPN652
_______

[C] COG0247 Fe-S oxidoreductase
  Afu:  AF0502 AF0506 AF0543 AF0544 AF0547 AF0661 AF0755
        AF0809 AF0867 AF1773 AF1851 AF1998
  Hbs:  VNG1972G VNG2320G VNG2422G_2 VNG6379C_2
  Mac:  MA0526 MA0687 MA0688 MA4410_2 MA4630
  Mth:  MTH139 MTH1850_2
  Mja:  MJ0092_2
  Mka:  MK0132_2 MK0498
  Tac:  Ta0198m Ta0540 Ta0541
  Tvo:  TVN0593 TVN0595 TVN1395
  Pya:  PAE1280 PAE1281 PAE1282 PAE1288 PAE1331 PAE1762 PAE2616
  Sso:  SSO0018 SSO2162_2 SSO2398 SSO2643 SSO3131 SSO3161
  Ape:  APE0101 APE0481 APE2352
  Aae:  aq_1639 aq_961
  Fnu:  FN1540_2
  Dra:  DR1730 DR1907 DR2565
  Cgl:  Cgl2262_2
  Mtu:  Rv0338c
  MtC:  MT0352
  Mle:  ML2501
  Lla:  L174321
  Bsu:  BS_ysfD BS_yvfV BS_ywjF
  Bha:  BH1832 BH2135 BH2729 BH3802
  Syn:  sll1831
  Nos:  all0623
  Eco:  glcF_2 glpC ydiJ_2 ykgE
  EcZ:  ZglpC ZydiJ_2 ZykgE
  Ecs:  ECs0344 ECs2394_2 ECs3128
  Ype:  YPO2407_2 YPO3824
  Sty:  STM1365_2 STM2286
  Vch:  VC1198_2 VCA0749 VCA0985_2
  Pae:  PA4772_2 PA5353 PA5399
  Hin:  HI0683 HI1163_2
  Pmu:  PM0787_2 PM1440 PM1853
  Nme:  NMB0998_2 NMB1436
  NmA:  NMA1206_2 NMA1648
  Rso:  RSc0454_2 RSc1611 RSc2668 RSp0059
  Hpy:  HP0139 HP0666 HP1222_2
  jHp:  jhp0127 jhp0611 jhp1143_2
  Cje:  Cj0075c Cj0991c Cj1585c_2
  Atu:  AGc1194
  Sme:  SMc00926
  Bme:  BMEII1061
  Mlo:  mlr5745 mlr6920
_______

[FP] COG0248 Exopolyphosphatase
  Mac:  MA0083 MA2351
  Sso:  SSO1193
  Sce:  YGL252c
  Aae:  aq_891
  Tma:  TM0195
  Fnu:  FN0871_2
  Dra:  DRA0185
  Cac:  CAC0621
  Cgl:  Cgl0404 Cgl0952
  Mtu:  Rv0496 Rv1026
  MtC:  MT0516 MT1054
  Mle:  ML0258 ML2434
  Bha:  BH1393
  Syn:  sll1546
  Nos:  all3552
  Eco:  gppA ppx
  EcZ:  ZgppA Zppx
  Ecs:  ECs3364 ECs4712
  Ype:  YPO2837
  Sty:  STM2502 STM3913
  Vch:  VC0304 VC0722
  Pae:  PA5241
  Hin:  HI0695
  Pmu:  PM1807
  Xfa:  XF2590
  Nme:  NMB1467
  NmA:  NMA1679
  Rso:  RSc1537
  Hpy:  HP0278
  jHp:  jhp0263
  Cje:  Cj0353c Cj1237c
  Atu:  AGc1098 AGc2117
  Sme:  SMc00619 SMc00810
  Bme:  BMEI1204 BMEII0598
  Mlo:  mlr8162 mlr8346
  Ccr:  CC1614 CC1708
  Rpr:  RP294
  Rco:  RC0392
_______

[L] COG0249 Mismatch repair ATPase (MutS family)
  Hbs:  VNG0163G VNG0172G
  Mac:  MA0523
  Tvo:  TVN0674 TVN0675
  Sce:  YCR092c YDL154w YDR097c YFL003c YHR120w YOL090w
  Spo:  SPAC13f5.01c SPAC8F11.03 SPBC19G7.01c SPBC24C6.12c SPCC285.16c
  Ecu:  ECU03g0540 ECU10g0710
  Aae:  aq_308
  Tma:  TM1719
  Fnu:  FN0693
  Dra:  DR1039
  Cac:  CAC1837 CAC3034 CAC3563
  Lla:  L0277
  Spy:  SPy2148
  Sau:  SA1137 SA1853
  Lin:  lin1440
  Bsu:  BS_mutS
  Bha:  BH2369
  Syn:  sll1165
  Nos:  alr3638
  Eco:  mutS
  EcZ:  ZmutS
  Ecs:  ECs3589
  Ype:  YPO3354
  Sty:  STM2909
  Buc:  BU429
  Vch:  VC0535
  Pae:  PA3620
  Hin:  HI0707
  Pmu:  PM1830
  Xfa:  XF1716
  Nme:  NMB2160
  NmA:  NMA0247
  Rso:  RSc1151
  Atu:  AGc602
  Sme:  SMc01125
  Bme:  BMEI1801
  Mlo:  mll5328
  Ccr:  CC0012
  Rpr:  RP298
  Rco:  RC0401
  Ctr:  CT792
  Cpn:  CPn0941
  Tpa:  TP0328
  Bbu:  BB0797
_______

[K] COG0250 Transcription antiterminator
  Afu:  AF0537
  Hbs:  VNG0374G
  Mac:  MA4273
  Mth:  MTH1678
  Mja:  MJ0372
  Mka:  MK0823
  Tac:  Ta1425
  Tvo:  TVN1443
  Pho:  PH0002
  Pab:  PAB2352
  Pya:  PAE3103
  Sso:  SSO0347
  Ape:  APE2176
  Spo:  SPAC23C4.19_2
  Aae:  aq_1931
  Tma:  TM0453
  Fnu:  FN2041
  Dra:  DR2047
  Cac:  CAC3149
  Cgl:  Cgl0468
  Mtu:  Rv0639
  MtC:  MT0668
  Mle:  ML1906
  Lla:  L157316
  Spy:  SPy0164
  Spn:  SP2007
  Sau:  SA0494
  Lin:  lin0278
  Bsu:  BS_nusG
  Bha:  BH0118
  Syn:  sll1742
  Nos:  alr5299
  Eco:  nusG rfaH
  EcZ:  ZnusG ZrfaH
  Ecs:  ECs4770 ECs4905
  Ype:  YPO3752 YPO3770
  Sty:  STM3977 STM4148
  Buc:  BU039
  Vch:  VC0323 VC0990
  Pae:  PA4275
  Hin:  HI0717
  Pmu:  PM1744
  Xfa:  XF2638
  Nme:  NMB0126
  NmA:  NMA0147
  Rso:  RSc3039
  Hpy:  HP1203
  jHp:  jhp1126
  Cje:  Cj0473
  Atu:  AGc3576 AGc797
  Sme:  SMc01322
  Bme:  BMEI0744
  Mlo:  mlr0270 mlr8519
  Ccr:  CC3205
  Rpr:  RP135
  Rco:  RC0176
  Ctr:  CT320
  Cpn:  CPn0076
  Tpa:  TP0236
  Bbu:  BB0394
  Uur:  UU581
  Mpu:  MYPU_1820
  Mpn:  MPN067
  Mge:  MG054
_______

[J] COG0251 Putative translation initiation inhibitor, yjgF family
  Hbs:  VNG2099C
  Pho:  PH0854
  Pab:  PAB0825
  Pya:  PAE3003
  Sso:  SSO3206
  Ape:  APE1501
  Sce:  YER057c YIL051c YLR143w_2
  Spo:  SPAC1039.10 SPBC2G2.04c SPBC577.12_2
  Aae:  aq_364
  Tma:  TM0215
  Fnu:  FN0606 FN1973
  Dra:  DR0033 DR2512
  Cac:  CAC1077 CAC1265
  Cgl:  Cgl0152 Cgl0282 Cgl0439 Cgl2170
  Mtu:  Rv2704 Rv3678c
  MtC:  MT2777.1 MT3779
  Mle:  ML2304
  Lla:  L52644
  Spy:  SPy0145 SPy2060
  Spn:  SP1567
  Sau:  SA0455
  Lin:  lin0837
  Bsu:  BS_yabJ
  Bha:  BH0063 BH3085
  Syn:  slr0318 slr0709
  Nos:  all0767 all3869_2
  Eco:  tdcF ycdK yjgF yjgH yoaB
  EcZ:  Z1509 Z2852 ZyhaR ZyjgF ZyjgH
  Ecs:  ECs1256 ECs2518 ECs3993 ECs5220 ECs5225
  Ype:  YPO0627 YPO0628 YPO1669 YPO2070 YPO3590
  Sty:  STM1549 STM1822 STM4458
  Buc:  BU371
  Vch:  VC1556 VC2512
  Pae:  PA0814 PA1568 PA3123 PA3499 PA4173 PA5083 PA5303
        PA5339 PA5392
  Hin:  HI0719 HI1627
  Pmu:  PM0366 PM1466
  Xfa:  XF0353 XF1711
  Nme:  NMB0662 NMB1025
  NmA:  NMA0861 NMA1463
  Rso:  RSc0986 RSc1575 RSp0039 RSp1188 RSp1246 RSp1315 RSp1322
        RSp1346 RSp1353 RSp1515
  Hpy:  HP0944
  jHp:  jhp0879
  Cje:  Cj0327 Cj1388
  Atu:  AGc2535 AGc2721 AGc3864 AGc4539 AGl1839 AGl3105 AGpA326
  Sme:  SMa0089 SMa2201 SMa2289 SMb20118 SMb20376 SMb20377 SMb21123
        SMb21139 SMb21157 SMb21439 SMc00791 SMc01714 SMc02103 SMc03796
  Bme:  BMEI0820 BMEII0278 BMEII0303 BMEII0540
  Mlo:  mll1058 mll2519 mll2520 mll4402 mll4450 mll4506 mll4611
        mll4827 mll5429 mlr0658 mlr1297 mlr3802 mlr8316
  Ccr:  CC1089 CC2158 CC2796
_______

[EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
  Afu:  AF0882
  Hbs:  VNG1844G
  Mac:  MA1317
  Mth:  MTH706
  Mja:  MJ0020
  Mka:  MK1509
  Tac:  Ta0972
  Tvo:  TVN1118
  Pho:  PH0066 PH1463
  Pab:  PAB1901 PAB2294
  Pya:  PAE1003
  Sso:  SSO0938
  Ape:  APE2200
  Sce:  YDR321w YHR139c YLR155c YLR157c YLR158c YLR160c YNL160w
  Spo:  SPAC186.03 SPAC977.12
  Fnu:  FN0751
  Dra:  DR2353
  Cac:  CAC1714
  Cgl:  Cgl2092
  Mtu:  Rv1538c
  MtC:  MT1590
  Mle:  ML1198
  Lla:  L142722
  Spy:  SPy1782
  Spn:  SP1998
  Sau:  SA1310
  Lin:  lin2054
  Bsu:  BS_ansA BS_yccC
  Bha:  BH1624
  Eco:  ansA ansB
  EcZ:  ZansA ZansB
  Ecs:  ECs2474 ECs3833
  Ype:  YPO1386 YPO2161
  Sty:  STM1294 STM3106 STM3598
  Vch:  VC1995
  Pae:  PA1337 PA2253
  Hin:  HI0745
  Xfa:  XF1093
  Nme:  NMB1688
  NmA:  NMA1947
  Rso:  RSc1306
  Hpy:  HP0723
  jHp:  jhp0661
  Cje:  Cj0029
  Atu:  AGl2084
  Bme:  BMEI0105 BMEI0107
_______

[E] COG0253 Diaminopimelate epimerase
  Afu:  AF0747
  Mth:  MTH1334
  Mja:  MJ1119
  Mka:  MK0434
  Aae:  aq_1838
  Tma:  TM1522
  Fnu:  FN1732
  Cac:  CAC2624
  Cgl:  Cgl1898
  Mtu:  Rv2726c
  MtC:  MT2798
  Mle:  ML0996
  Sau:  SA2258
  Lin:  lin2126
  Bsu:  BS_yutL
  Bha:  BH2071 BH3412
  Syn:  slr1665
  Nos:  alr2048 alr4841
  Eco:  dapF
  EcZ:  ZdapF
  Ecs:  ECs4739
  Ype:  YPO3845
  Sty:  STM3947
  Buc:  BU589
  Vch:  VC0126
  Pae:  PA5278
  Hin:  HI0750
  Pmu:  PM1703
  Xfa:  XF1481
  Nme:  NMB0760
  NmA:  NMA0972
  Rso:  RSc0137
  Hpy:  HP0566
  jHp:  jhp0513
  Cje:  Cj1531
  Atu:  AGc4886
  Sme:  SMc03856
  Bme:  BMEI0133
  Mlo:  mlr4318
  Ccr:  CC3686
  Rpr:  RP415
  Rco:  RC0579
  Ctr:  CT430
  Cpn:  CPn0519
_______

[J] COG0254 Ribosomal protein L31
  Aae:  aq_rpmE
  Tma:  TM1684
  Fnu:  FN0482
  Dra:  DR0825
  Cac:  CAC2888
  Cgl:  Cgl0848
  Mtu:  Rv1298
  MtC:  MT1337
  Mle:  ML1133
  Lla:  L0425
  Spy:  SPy0717
  Spn:  SP1299
  Sau:  SA1922
  Lin:  lin2692
  Bsu:  BS_rpmE BS_ytiA
  Bha:  BH3780
  Syn:  ssl3445
  Nos:  asl4186
  Eco:  rpmE ykgM
  EcZ:  Z1152 Z1591 ZrpmE ZykgM
  Ecs:  ECs0327 ECs1330 ECs4863
  Ype:  YPO0111 YPO3134
  Sty:  STM0469 STM4096
  Buc:  BU577
  Vch:  VC0878 VC2679
  Pae:  PA3601 PA5049
  Hin:  HI0758
  Pmu:  PM0220 PM1142
  Xfa:  XF1534
  Nme:  NMB0942 NMB1956
  NmA:  NMA0495 NMA1138
  Rso:  RSc1182
  Hpy:  HP0551
  jHp:  jhp0498
  Cje:  Cj0155c
  Atu:  AGl2181
  Sme:  SMc03990
  Bme:  BMEI0322
  Mlo:  msr3935
  Ccr:  CC3275
  Rpr:  RP100
  Rco:  RC0137
  Ctr:  CT022
  Cpn:  CPn0112
  Tpa:  TP0255
  Bbu:  BB0229
  Uur:  UU002
  Mpu:  MYPU_1400
  Mpn:  MPN360
  Mge:  MG257
_______

[J] COG0255 Ribosomal protein L29
  Afu:  AF1918
  Hbs:  VNG1698G
  Mac:  MA1079
  Mth:  MTH9
  Mja:  MJ0462
  Mka:  MK0843
  Tac:  Ta1264a
  Tvo:  TVN0331
  Pho:  PHS048
  Pab:  PAB8082
  Pya:  PAE1778
  Sso:  SSO6397
  Ape:  APE0362a
  Sce:  YDL136w YDL191w
  Spo:  SPCC613.05c
  Ecu:  ECU07g1820 ECU10g0070 ECU11g2060
  Aae:  aq_018a
  Tma:  TM1492
  Fnu:  FN1637
  Dra:  DR0319
  Cac:  CAC3125
  Cgl:  Cgl0504
  Mtu:  Rv0709
  MtC:  MT0736
  Mle:  ML1855
  Lla:  L0423
  Spy:  SPy0059
  Spn:  SP0217
  Sau:  SA2039
  Lin:  lin2773
  Bsu:  BS_rpmC
  Bha:  BH0142
  Syn:  ssl3436
  Nos:  asl4207
  Eco:  rpmC
  EcZ:  ZrpmC
  Ecs:  ECs4177
  Ype:  YPO0218
  Sty:  STM3432
  Buc:  BU516
  Vch:  VC2588
  Pae:  PA4255
  Hin:  HI0785
  Pmu:  PM1407
  Xfa:  XF1160
  Nme:  NMB0150
  NmA:  NMA0121
  Rso:  RSc3011
  Hpy:  HP1311
  jHp:  jhp1231
  Cje:  Cj1699c
  Atu:  AGc3543
  Sme:  SMc01301
  Bme:  BMEI0765
  Mlo:  msr0303
  Ccr:  CC1256
  Rpr:  RP651
  Rco:  RC0998
  Ctr:  CT520
  Cpn:  CPn0639
  Tpa:  TP0197
  Bbu:  BB0486
  Uur:  UU239
  Mpu:  MYPU_5790
  Mpn:  MPN173
  Mge:  MG159
_______

[J] COG0256 Ribosomal protein L18
  Afu:  AF1906
  Hbs:  VNG1714G
  Mac:  MA1091
  Mth:  MTH22
  Mja:  MJ0474
  Mka:  MK0030
  Tac:  Ta1252m
  Tvo:  TVN0344
  Pho:  PH1758
  Pab:  PAB2135
  Pya:  PAE2101
  Sso:  SSO0699
  Ape:  APE0347
  Sce:  YPL131w
  Spo:  SPAC3H5.12c SPBC11C11.09c
  Ecu:  ECU06g0900i
  Aae:  aq_1648
  Tma:  TM1484
  Fnu:  FN1628
  Dra:  DR2112
  Cac:  CAC3117
  Cgl:  Cgl0526
  Mtu:  Rv0720
  MtC:  MT0745
  Mle:  ML1843
  Lla:  L0414
  Spy:  SPy0067
  Spn:  SP0226
  Sau:  SA2032
  Lin:  lin2765
  Bsu:  BS_rplR
  Bha:  BH0150
  Syn:  sll1811
  Nos:  all4200
  Eco:  rplR
  EcZ:  ZrplR
  Ecs:  ECs4169
  Ype:  YPO0225
  Sty:  STM3424
  Buc:  BU508
  Vch:  VC2580
  Pae:  PA4247
  Hin:  HI0794
  Pmu:  PM1399
  Xfa:  XF1168
  Nme:  NMB0158
  NmA:  NMA0113
  Rso:  RSc3003
  Hpy:  HP1303
  jHp:  jhp1223
  Cje:  Cj1691c
  Atu:  AGc3531
  Sme:  SMc01293
  Bme:  BMEI0773
  Mlo:  mlr0313
  Ccr:  CC1264
  Rpr:  RP643
  Rco:  RC0990
  Ctr:  CT513
  Cpn:  CPn0632
  Tpa:  TP0205
  Bbu:  BB0494
  Uur:  UU247
  Mpu:  MYPU_5710
  Mpn:  MPN181
  Mge:  MG167
_______

[J] COG0257 Ribosomal protein L36
  Sce:  YPL183w-a
  Spo:  SPBC83.06c
  Aae:  aq_075
  Tma:  TM1476
  Dra:  DR2124
  Cac:  CAC3108
  Cgl:  Cgl2481
  Mtu:  Rv3461c
  MtC:  MT3567.1
  Mle:  ML1961
  Lla:  L153863
  Spy:  SPy0076
  Spn:  SP0233
  Sau:  SAS078
  Lin:  lin2758
  Bsu:  BS_rpmJ
  Bha:  BH0159
  Syn:  sml0006
  Nos:  asl4194
  Eco:  rpmJ
  EcZ:  ZrpmJ
  Ecs:  ECs4164
  Ype:  YPO0230 YPO3135
  Sty:  STM0470 STM3419
  Buc:  BU503
  Vch:  VC0879 VC2575
  Pae:  PA3600 PA4242
  Hin:  HI0798.1
  Pmu:  PM1394
  Xfa:  XF2440
  Nme:  NMB0164 NMB0941
  NmA:  NMA0107 NMA1137
  Rso:  RSc2997
  Hpy:  HP1297
  jHp:  jhp1217
  Cje:  Cj1591
  Sme:  SMc04003
  Bme:  BMEI0294
  Mlo:  msr3814
  Ccr:  CC3321
  Rpr:  RP456
  Rco:  RC0682
  Ctr:  CT786
  Cpn:  CPn0936
  Tpa:  TP0209
  Bbu:  BB0499
  Uur:  UU254
  Mpu:  MYPU_5640
  Mpn:  MPN188
  Mge:  MG174
_______

[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI)
  Afu:  AF0264
  Hbs:  VNG1359G
  Mac:  MA4004
  Mth:  MTH1633
  Mja:  MJ1444
  Mka:  MK0566
  Tac:  Ta1035
  Tvo:  TVN0560
  Pho:  PH1415
  Pab:  PAB1877
  Pya:  PAE0698
  Sso:  SSO0179
  Ape:  APE0115
  Sce:  YDR263c YER041w_1 YGR258c YKL113c YOR033c_1
  Spo:  SPAC12G12.16c SPAC3G6.06c SPBC29A10.05 SPBC3E7.08c
  Ecu:  ECU03g1080 ECU09g1620 ECU11g0760
  Aae:  aq_1628
  Tma:  TM1619_1
  Fnu:  FN0705_1
  Dra:  DR1707_1
  Cac:  CAC1098_1
  Cgl:  Cgl1317_1
  Mtu:  Rv1629_1 Rv2090
  MtC:  MT1665_1 MT2151
  Mle:  ML1381_1
  Lla:  L0270_1
  Spy:  SPy0185_1
  Spn:  SP0032_1
  Sau:  SA1273 SA1513_1
  Lin:  lin1600_1 lin1994
  Bsu:  BS_polA_1 BS_ypcP
  Bha:  BH2180 BH3153_1
  Syn:  slr0707_1
  Nos:  alr1254_1
  Eco:  exo polA_1
  EcZ:  Zexo ZpolA_1
  Ecs:  ECs3658 ECs4786_1
  Ype:  YPMT1.51c YPO0017_1 YPO1032
  Sty:  STM2972 STM3999_1
  Buc:  BU431
  Vch:  VC0108_1 VC0898
  Pae:  PA5493_1
  Hin:  HI0856_1
  Pmu:  PM1065_1
  Xfa:  XF1103_1
  Nme:  NMB1982_1
  NmA:  NMA0462_1
  Rso:  RSc2230_1
  Hpy:  HP1022 HP1470_1
  jHp:  jhp0402 jhp1363_1
  Cje:  Cj0338c_1
  Atu:  AGc169_1
  Sme:  SMc02850_1
  Bme:  BMEI1825_1
  Mlo:  mlr3298_1
  Ccr:  CC3464_1
  Rpr:  RP776_1
  Rco:  RC1206_1
  Ctr:  CT493_1
  Cpn:  CPn0612_1
  Tpa:  TP0105_1
  Bbu:  BB0548_1
  Uur:  UU414
  Mpu:  MYPU_7200
  Mpn:  MPN379
  Mge:  MG262
_______

[H] COG0259 Pyridoxamine-phosphate oxidase
  Sce:  YBR035c
  Spo:  SPAC1093.02
  Dra:  DR0495
  Mtu:  Rv2607
  MtC:  MT2682
  Mle:  ML2131
  Syn:  sll1440
  Nos:  all1248
  Eco:  pdxH
  EcZ:  ZpdxH
  Ecs:  ECs2347
  Ype:  YPO2370
  Sty:  STM1448
  Vch:  VCA1079
  Pae:  PA1049 PA1905 PA4216
  Hin:  HI0863
  Xfa:  XF1337
  Nme:  NMB1360
  NmA:  NMA1572
  Rso:  RSc0767 RSp0678
  Atu:  AGc1381
  Sme:  SMc00069
  Bme:  BMEI1517
  Mlo:  mll7454
  Ccr:  CC0918
_______

[E] COG0260 Leucyl aminopeptidase
  Ape:  APE2450
  Spo:  SPAC13A11.05
  Ecu:  ECU10g1770i
  Aae:  aq_2099
  Fnu:  FN1906
  Dra:  DR0717
  Cgl:  Cgl2156
  Mtu:  Rv2213
  MtC:  MT2269
  Mle:  ML0864
  Sau:  SA0803
  Bsu:  BS_yuiE
  Bha:  BH3401
  Syn:  sll2001
  Nos:  alr0237
  Eco:  pepA pepB
  EcZ:  ZpepA ZpepB
  Ecs:  ECs3389 ECs5237
  Ype:  YPO2889 YPO3441
  Sty:  STM2536 STM4477
  Buc:  BU367
  Vch:  VC0755 VC2501
  Pae:  PA3831
  Hin:  HI0875 HI1705
  Pmu:  PM0195 PM1029
  Xfa:  XF0138 XF0280
  NmA:  NMA1758
  Rso:  RSc2415
  Hpy:  HP0570
  jHp:  jhp0517
  Cje:  Cj0929
  Atu:  AGc2055 AGc368
  Sme:  SMc00585 SMc02825
  Bme:  BMEI1261 BMEI1948
  Mlo:  mll0602 mlr5606 mlr7868
  Ccr:  CC0977 CC1692 CC2937
  Rpr:  RP142
  Rco:  RC0184
  Ctr:  CT045
  Cpn:  CPn0385
  Uur:  UU507
  Mpu:  MYPU_3750 MYPU_7260
  Mpn:  MPN572
  Mge:  MG391
_______

[J] COG0261 Ribosomal protein L21
  Aae:  aq_1641a
  Tma:  TM1458
  Fnu:  FN1117
  Dra:  DR0086
  Cac:  CAC1257
  Cgl:  Cgl2312
  Mtu:  Rv2442c
  MtC:  MT2518
  Mle:  ML1467
  Lla:  L0417
  Spy:  SPy0819
  Spn:  SP1105
  Sau:  SA1473
  Lin:  lin1577
  Bsu:  BS_rplU
  Bha:  BH3011
  Syn:  slr1678
  Nos:  all0147
  Eco:  rplU
  EcZ:  ZrplU
  Ecs:  ECs4065
  Ype:  YPO3512
  Sty:  STM3304
  Buc:  BU387
  Vch:  VC0435
  Pae:  PA4568
  Hin:  HI0880
  Pmu:  PM0347
  Xfa:  XF2424
  Nme:  NMB0325
  NmA:  NMA2162
  Rso:  RSc2822
  Hpy:  HP0296
  jHp:  jhp0281
  Cje:  Cj0094
  Atu:  AGc5054
  Sme:  SMc03770
  Bme:  BMEI0201
  Mlo:  mll4019_1
  Ccr:  CC0319
  Rpr:  RP751
  Rco:  RC1162
  Ctr:  CT420
  Cpn:  CPn0546
  Tpa:  TP0745
  Bbu:  BB0778
  Uur:  UU212
  Mpu:  MYPU_3300
  Mpn:  MPN325
  Mge:  MG232
_______

[H] COG0262 Dihydrofolate reductase
  Mac:  MA4540
  Sce:  YOR236w
  Spo:  SPCC1223.08c_2
  Ecu:  ECU01g0170 ECU01g1450 ECU08g0080
  Tma:  TM1641
  Fnu:  FN0241
  Dra:  DR0793 DR2632
  Cac:  CAC1495 CAC3004
  Cgl:  Cgl0700 Cgl0820
  Mtu:  Rv2763c
  MtC:  MT2833
  Mle:  ML1518
  Lla:  L162872 L18647
  Spy:  SPy0883
  Spn:  SP1571
  Sau:  SA1259
  Lin:  lin1987 lin2717
  Bsu:  BS_dfrA BS_ywjB BS_yyaP
  Bha:  BH3450
  Eco:  folA
  EcZ:  Z0055
  Ecs:  ECs0051
  Ype:  YPO0486
  Sty:  STM0087
  Buc:  BU143
  Vch:  VC0440
  Pae:  PA0350 PA3469
  Hin:  HI0899
  Pmu:  PM1893
  Xfa:  XF2331
  Nme:  NMB0308
  NmA:  NMA2179
  Rso:  RSc0946
  Atu:  AGc2241 AGc3708 AGl575
  Sme:  SMa1326 SMc01442 SMc02439 SMc04173
  Bme:  BMEI0609
  Mlo:  mll1457 mll1872 mll8258 mll8388 mlr0926 mlr2503 mlr2644
  Ccr:  CC2126
  Rco:  RC0034
  Ctr:  CT612
  Cpn:  CPn0759
  Uur:  UU114
  Mpu:  MYPU_5370
  Mpn:  MPN300_1 MPN321
  Mge:  MG213_1 MG228
_______

[E] COG0263 Glutamate 5-kinase
  Mac:  MA4101
  Sce:  YDR300c YHR033w
  Spo:  SPAC17H9.13c
  Aae:  aq_1134
  Tma:  TM0294
  Dra:  DR1827
  Cac:  CAC3253
  Cgl:  Cgl2305
  Mtu:  Rv2439c
  MtC:  MT2515
  Mle:  ML1464
  Lla:  L0117
  Spy:  SPy1672
  Spn:  SP0931
  Lin:  lin1228
  Bsu:  BS_proB BS_proJ
  Bha:  BH1505
  Syn:  slr2035
  Nos:  alr3103
  Eco:  proB
  EcZ:  ZproB
  Ecs:  ECs0269
  Ype:  YPO3222
  Sty:  STM0321
  Vch:  VC2274
  Pae:  PA4565
  Hin:  HI0900
  Pmu:  PM1896
  Xfa:  XF1004
  Nme:  NMB1069
  NmA:  NMA1268
  Rso:  RSc2819
  Cje:  Cj0097
  Atu:  AGc5045
  Sme:  SMc03252 SMc03776
  Bme:  BMEI0207
  Mlo:  mll4011 mlr6298
  Ccr:  CC0314
  Tpa:  TP0351
_______

[J] COG0264 Translation elongation factor Ts
  Spo:  SPBC800.07c
  Aae:  aq_715
  Tma:  TM1605
  Fnu:  FN1621
  Dra:  DR1512
  Cac:  CAC1788
  Cgl:  Cgl1978
  Mtu:  Rv2889c
  MtC:  MT2957
  Mle:  ML1597
  Lla:  L0376
  Spy:  SPy2093
  Spn:  SP2214
  Sau:  SA1100
  Lin:  lin1766
  Bsu:  BS_tsf
  Bha:  BH2426
  Syn:  sll1261
  Nos:  all4791
  Eco:  tsf
  EcZ:  Ztsf
  Ecs:  ECs0172
  Ype:  YPO1045
  Sty:  STM0217
  Buc:  BU232
  Vch:  VC2259
  Pae:  PA3655
  Hin:  HI0914
  Pmu:  PM1985
  Xfa:  XF2579
  Nme:  NMB2102
  NmA:  NMA0327
  Rso:  RSc1405
  Hpy:  HP1555
  jHp:  jhp1444
  Cje:  Cj1181c
  Atu:  AGc2541
  Sme:  SMc02100
  Bme:  BMEI0824
  Mlo:  mll0650
  Ccr:  CC1922
  Rpr:  RP087
  Rco:  RC0113
  Ctr:  CT679
  Cpn:  CPn0697
  Tpa:  TP0605
  Bbu:  BB0122
  Uur:  UU514
  Mpu:  MYPU_5320
  Mpn:  MPN631
  Mge:  MG433
_______

[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
  Hbs:  VNG0226G
  Mac:  MA3330_1
  Mth:  MTH1813
  Pya:  PAE2795
  Sso:  SSO2612
  Sce:  YIL007c YNL123w
  Spo:  SPAC23G3.12c SPAC2H10.02c SPBC1685.05
  Aae:  aq_1450
  Tma:  TM0571
  Fnu:  FN1280_1
  Dra:  DR0300 DR0327 DR0745 DR0984 DR1599 DR1756
  Cac:  CAC0463 CAC0500 CAC2433 CAC3218
  Cgl:  Cgl0296 Cgl0852 Cgl1069 Cgl1313 Cgl1452 Cgl1672 Cgl1822
  Mtu:  Rv0125 Rv0983 Rv1043c Rv1223 Rv3671c
  MtC:  MT0133 MT1011 MT1073 MT1261 MT3772
  Mle:  ML0176 ML1078 ML2298 ML2659
  Lla:  L187771
  Spy:  SPy2216
  Spn:  SP2239
  Sau:  SA0879 SA1549
  Lin:  lin0320 lin2645
  Bsu:  BS_htrA BS_yvjD BS_yvtB BS_yyxA
  Bha:  BH2189 BH3598 BH4022
  Syn:  sll1427 sll1679 slr1204
  Nos:  all2008 alr0702 alr2758 alr5164
  Eco:  degQ degS htrA
  EcZ:  ZdegQ ZdegS ZhtrA
  Ecs:  ECs0165 ECs4107 ECs4108
  Ype:  YPO3382 YPO3566 YPO3568
  Sty:  STM0209 STM3348 STM3349
  Buc:  BU228
  Vch:  VC0565 VC0566
  Pae:  PA0766 PA4446
  Hin:  HI0945 HI1259
  Pmu:  PM0734 PM0748
  Xfa:  XF0285 XF2241
  Nme:  NMB0532
  NmA:  NMA0710
  Rso:  RSc1058 RSc2932 RSc3140 RSp1552
  Hpy:  HP1019
  jHp:  jhp0405
  Cje:  Cj1228c
  Atu:  AGc1792 AGc3507 AGc3700
  Sme:  SMa1128 SMc01280 SMc01438 SMc02365
  Bme:  BMEI0613 BMEI0783 BMEI1330
  Mlo:  mll1451 mll2051 mll2416 mll5022 mll9173 mlr0328 mlr2417
        mlr7692
  Ccr:  CC0136 CC0151 CC0702 CC1282 CC2758
  Rpr:  RP124 RP186 RP187
  Rco:  RC0166 RC0234
  Ctr:  CT823
  Cpn:  CPn0979
  Tpa:  TP0546 TP0773 TP0841
  Bbu:  BB0104
_______

[L] COG0266 Formamidopyrimidine-DNA glycosylase
  Dra:  DR0493
  Cgl:  Cgl0824 Cgl2021 Cgl2944
  Mtu:  Rv0944 Rv2464c Rv2924c Rv3297
  MtC:  MT0970 MT2539 MT2994 MT3396
  Mle:  ML1658
  Lla:  L0271
  Spy:  SPy0497
  Spn:  SP0970
  Sau:  SA1512
  Lin:  lin1599
  Bsu:  BS_mutM
  Bha:  BH3152
  Syn:  slr1689
  Nos:  alr4320
  Eco:  mutM nei
  EcZ:  ZmutM Znei
  Ecs:  ECs0739 ECs4510
  Ype:  YPO0052
  Sty:  STM0728 STM3726
  Vch:  VC0221
  Pae:  PA0357
  Hin:  HI0946
  Pmu:  PM1145
  Xfa:  XF0071 XF0170
  Nme:  NMB1295
  NmA:  NMA1505
  Rso:  RSc0399
  Atu:  AGc561
  Sme:  SMc01154
  Bme:  BMEI1946
  Mlo:  mll5585
  Ccr:  CC3707
  Rco:  RC1038
  Uur:  UU413
  Mpu:  MYPU_3100
  Mpn:  MPN380
  Mge:  MG262.1
_______

[J] COG0267 Ribosomal protein L33
  Sce:  YML009c
  Spo:  SPBC4F6.08c
  Aae:  aq_1930a
  Tma:  TM0451
  Fnu:  FN2044
  Dra:  DR2049
  Cac:  CAC3151
  Cgl:  Cgl0844
  Mtu:  Rv2057c
  MtC:  MT0663 MT2117.1
  Mle:  ML1911
  Lla:  L0096 L0427 L74935
  Spy:  SPy2160
  Spn:  SP0973 SP2009 SP2135
  Sau:  SAS042 SAS047
  Lin:  lin0276 lin1372
  Bsu:  BS_rpmG BS_yqgNa
  Bha:  BH0116
  Syn:  ssr1398
  Nos:  asl4452
  Eco:  rpmG
  EcZ:  ZrpmG
  Ecs:  ECs4511
  Ype:  YPO0051
  Sty:  STM3727
  Buc:  BU085
  Vch:  VC0219
  Pae:  PA5315
  Hin:  HI0950
  Pmu:  PM1150
  Xfa:  XF1207
  Nme:  NMB0322
  NmA:  NMA2165
  Rso:  RSc2446
  Hpy:  HP1204
  jHp:  jhp1127
  Cje:  Cj0471
  Sme:  SMc01369
  Bme:  BMEII0661
  Mlo:  msr0848
  Ccr:  CC2459
  Rpr:  RP879
  Rco:  RC1360
  Ctr:  CT150
  Cpn:  CPn0250
  Tpa:  TP0234
  Bbu:  BB0396
  Uur:  UU533 UU579a
  Mpu:  MYPU_1800 MYPU_4890
  Mpn:  MPN069 MPN471
  Mge:  MG055.1 MG325
_______

[J] COG0268 Ribosomal protein S20
  Aae:  aq_1767
  Tma:  TM1657
  Fnu:  FN1879
  Dra:  DR1309
  Cac:  CAC1274
  Cgl:  Cgl2292
  Mtu:  Rv2412
  MtC:  MT2485
  Mle:  ML0604
  Lla:  L0397
  Spy:  SPy1234
  Spn:  SP0838
  Sau:  SA1414
  Lin:  lin1515
  Bsu:  BS_rpsT
  Bha:  BH1339
  Syn:  ssl2233
  Nos:  asr1592
  Eco:  rpsT
  EcZ:  ZrpsT
  Ecs:  ECs0026
  Ype:  YPO0472
  Sty:  STM0043
  Buc:  BU151
  Vch:  VC0679
  Pae:  PA4563
  Hin:  HI0965
  Pmu:  PM1659
  Xfa:  XF2421
  Nme:  NMB0463
  NmA:  NMA2022
  Rso:  RSc2556
  Hpy:  HP0076
  jHp:  jhp0071
  Cje:  Cj1611
  Atu:  AGc563
  Sme:  SMc01152
  Bme:  BMEI1944
  Mlo:  mll5582
  Ccr:  CC0007
  Rpr:  RP633
  Rco:  RC0980
  Ctr:  CT617
  Cpn:  CPn0754
  Tpa:  TP0250a
  Bbu:  BB0233
  Uur:  UU310
  Mpu:  MYPU_6560
  Mpn:  MPN541
  Mge:  MG363.1
_______

[G] COG0269 3-hexulose-6-phosphate synthase and related proteins
  Afu:  AF0861_1 AF1305_2
  Mac:  MA4504_1 MA4608_2
  Mth:  MTH1474_2
  Mja:  MJ1447_2
  Mka:  MK0153
  Pho:  PH1938_1
  Pab:  PAB1222_1
  Pya:  PAE1679
  Sso:  SSO0202
  Ape:  APE0952
  Cac:  CAC0396
  Spy:  SPy0177
  Spn:  SP2035
  Sau:  SA0528
  Bsu:  BS_hxlA
  Eco:  sgaH sgbH
  EcZ:  ZsgaH
  Ecs:  ECs5172
  Sty:  STM2755 STM3675 STM4386
  Vch:  VCA0242
  Hin:  HI1024
  Pmu:  PM0766 PM1246
  Mpu:  MYPU_5970
  Mpn:  MPN493
_______

[L] COG0270 Site-specific DNA methylase
  Mth:  MTH495
  Mja:  MJ0563 MJ1200
  Mka:  MK1520
  Pho:  PH0039
  Pab:  PAB2317
  Pya:  PAE1659 PAE3201
  Sso:  SSO0265
  Ape:  APE0872 APE2002
  Spo:  SPBC19C2.02
  Cac:  CAC1222 CAC1501
  Cgl:  Cgl1728
  Spy:  SPy1077
  Spn:  SP1336
  Bsu:  BS_mtbP BS_ydiO BS_ydiP
  Bha:  BH3508
  Syn:  slr0214
  Nos:  all0934 all7270 all7369 alr2276 alr4173 alr4815
  Eco:  dcm
  EcZ:  Z2389 Zdcm
  Ecs:  ECs1953 ECs2699
  Sty:  STM1992
  Vch:  VCA0198
  Hin:  HI1041
  Xfa:  XF1774
  Nme:  NMB0725 NMB0826 NMB1033 NMB1290
  NmA:  NMA0427 NMA1035 NMA1453 NMA1500
  Rso:  RSc0869 RSc3438
  Hpy:  HP0051 HP0054_1 HP1121
  jHp:  jhp0044_2 jhp0435 jhp1050
  Sme:  SMc03763
  Mlo:  mlr7992 mlr8517
  Ccr:  CC1033 CC3626
  Uur:  UU528
  Mpu:  MYPU_0430 MYPU_0440 MYPU_1850 MYPU_1860
_______

[T] COG0271 Stress-induced morphogen (activity unknown)
  Hbs:  VNG1357C
  Sce:  YAL044w-a YAL046c YGL220w
  Spo:  SPAC8C9.11 SPBC16E9.06c SPCC4B3.11c
  Syn:  ssr3122
  Nos:  asr0798
  Eco:  bolA
  EcZ:  ZbolA
  Ecs:  ECs0489
  Ype:  YPO3160
  Sty:  STM0446
  Buc:  BU473
  Vch:  VC2296
  Pae:  PA0857
  Hin:  HI0163
  Pmu:  PM1324
  Xfa:  XF2450
  Nme:  NMB0344
  NmA:  NMA2143
  Rso:  RSc1745
  Atu:  AGc3395 AGl2404
  Sme:  SMc00487 SMc00698
  Bme:  BMEI0045 BMEI1128
  Mlo:  mlr3565 msl0055
  Ccr:  CC2503 CC3011
  Rpr:  RP245 RP812
  Rco:  RC0329 RC1254
_______

[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)
  Aae:  aq_633
  Tma:  TM0100
  Fnu:  FN1717
  Dra:  DR2069
  Cac:  CAC1195 CAC2673
  Cgl:  Cgl1215
  Mtu:  Rv3014c
  MtC:  MT3094
  Mle:  ML1705
  Lla:  L0304
  Spy:  SPy0751
  Spn:  SP1117
  Sau:  SA1720
  Lin:  lin1870
  Bsu:  BS_yerG
  Bha:  BH0649
  Syn:  sll1209
  Nos:  all1717
  Eco:  lig yicF
  EcZ:  Zlig ZyicF
  Ecs:  ECs3283 ECs4522
  Ype:  YPO0041 YPO2989
  Sty:  STM2427 STM3739
  Buc:  BU067
  Vch:  VC0971
  Pae:  PA1529
  Hin:  HI1100
  Pmu:  PM1716
  Xfa:  XF2556
  Nme:  NMB0666
  NmA:  NMA0865
  Rso:  RSc1398
  Hpy:  HP0615
  jHp:  jhp0558
  Cje:  Cj0586
  Atu:  AGc3775
  Sme:  SMc01878
  Bme:  BMEI0589
  Mlo:  mll1539
  Ccr:  CC1522
  Rpr:  RP720
  Rco:  RC1096
  Ctr:  CT146
  Cpn:  CPn0149
  Tpa:  TP0634
  Bbu:  BB0552
  Uur:  UU121
  Mpu:  MYPU_3890 MYPU_4010
  Mpn:  MPN357
  Mge:  MG254
_______

[F] COG0274 Deoxyribose-phosphate aldolase
  Hbs:  VNG1859G
  Mth:  MTH818
  Tac:  Ta0684
  Tvo:  TVN0175
  Pya:  PAE1231
  Ape:  APE2437
  Aae:  aq_148
  Tma:  TM1559
  Dra:  DR1205
  Cac:  CAC1545
  Cgl:  Cgl0379
  Mtu:  Rv0478
  MtC:  MT0496
  Mle:  ML2451
  Lla:  L63310
  Spy:  SPy1867
  Spn:  SP0843
  Sau:  SA0133 SA1939
  Lin:  lin2103
  Bsu:  BS_dra
  Bha:  BH1352
  Syn:  sll1776
  Nos:  alr4174
  Eco:  deoC
  EcZ:  ZdeoC
  Ecs:  ECs5340
  Ype:  YPO0436 YPO1323 YPO3622
  Sty:  STM4567
  Vch:  VC2350
  Hin:  HI1116
  Pmu:  PM1343
  Atu:  AGc211 AGl76
  Sme:  SMb21300 SMc02333
  Mlo:  mll4784
  Tpa:  TP0264
  Uur:  UU585
  Mpu:  MYPU_3140
  Mpn:  MPN063
  Mge:  MG050
_______

[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
  Aae:  aq_1875
  Tma:  TM0872
  Fnu:  FN1711
  Dra:  DR1866
  Cac:  CAC2132
  Cgl:  Cgl2116
  Mtu:  Rv2165c
  MtC:  MT2223
  Mle:  ML0906
  Lla:  L87561
  Spy:  SPy1666
  Spn:  SP0334
  Sau:  SA1022
  Lin:  lin2147
  Bsu:  BS_ylxA
  Bha:  BH2575
  Syn:  sll1144
  Nos:  all3354
  Eco:  yabC
  EcZ:  ZyabC
  Ecs:  ECs0086
  Ype:  YPO0547
  Sty:  STM0120
  Buc:  BU224
  Vch:  VC2409
  Pae:  PA4420
  Hin:  HI1130
  Pmu:  PM0134
  Xfa:  XF0790
  Nme:  NMB0411
  NmA:  NMA2074
  Rso:  RSc2852
  Hpy:  HP0707
  jHp:  jhp0646
  Cje:  Cj0693c
  Atu:  AGc3815
  Sme:  SMc01858
  Bme:  BMEI0571
  Mlo:  mll1565
  Ccr:  CC2562
  Rpr:  RP569
  Rco:  RC0857
  Ctr:  CT272
  Cpn:  CPn0421
  Tpa:  TP0384
  Bbu:  BB0306
  Uur:  UU386
  Mpu:  MYPU_4930
  Mpn:  MPN315
  Mge:  MG222
_______

[H] COG0276 Protoheme ferro-lyase (ferrochelatase)
  Tac:  Ta0311
  Tvo:  TVN1293
  Sce:  YOR176w
  Spo:  SPCC320.09
  Aae:  aq_948
  Dra:  DR1131
  Cgl:  Cgl1500
  Mtu:  Rv1485
  MtC:  MT1532
  Mle:  ML1805
  Lla:  L0194
  Spn:  SP1009
  Sau:  SA1651
  Lin:  lin2314
  Bsu:  BS_hemH
  Bha:  BH1203
  Syn:  slr0839_1
  Nos:  alr3751 alr4616
  Eco:  hemH
  EcZ:  ZhemH
  Ecs:  ECs0528
  Ype:  YPO3117
  Sty:  STM0489
  Vch:  VC0987
  Pae:  PA4655
  Hin:  HI1160
  Pmu:  PM0789
  Xfa:  XF0566
  Nme:  NMB0718
  NmA:  NMA0927
  Rso:  RSc2643
  Hpy:  HP0376
  jHp:  jhp1005
  Cje:  Cj0503c
  Atu:  AGl2129
  Sme:  SMc04019
  Bme:  BMEII0018
  Mlo:  mlr3019
  Ccr:  CC3762
  Rpr:  RP884
  Rco:  RC1373
  Ctr:  CT485
  Cpn:  CPn0603
_______

[C] COG0277 FAD/FMN-containing dehydrogenases
  Afu:  AF0394 AF0507 AF0808 AF0868
  Hbs:  VNG2422G_1
  Mac:  MA4410_1 MA4631
  Tac:  Ta0542
  Tvo:  TVN0596
  Pya:  PAE1284 PAE1286 PAE2035
  Sso:  SSO0788 SSO1004 SSO1063 SSO1531 SSO2162_1 SSO3163 SSO3165
  Ape:  APE0308 APE0487
  Sce:  YDL174c YDL178w YEL071w YML086c
  Spo:  SPAPB1A10.12c SPBC713.03
  Aae:  aq_1769
  Fnu:  FN1536
  Dra:  DR1026 DR1731 DR1732
  Cac:  CAC2542
  Cgl:  Cgl0191 Cgl0556 Cgl0877 Cgl2262_1
  Mtu:  Rv0063 Rv0161 Rv1257c Rv1726 Rv1771 Rv1774 Rv2251
        Rv2280 Rv3107c Rv3351c Rv3352c Rv3353c Rv3719 Rv3790
  MtC:  MT0068 MT1296 MT1767 MT1821 MT1824 MT2311 MT2338
        MT3190 MT3459 MT3460 MT3461 MT3822 MT3898
  Mle:  ML0109 ML1103 ML2333 ML2631
  Bsu:  BS_ygaK BS_yitY BS_ysfC BS_yvdP
  Bha:  BH2134 BH2136 BH2730
  Syn:  sll0404 sll1189 slr0806
  Nos:  all0324 all0624 all4443 alr5269
  Eco:  dld glcD glcF_1 ydiJ_1 ygcT ygcU
  EcZ:  Z4084 Zdld ZydiJ_1
  Ecs:  ECs2394_1 ECs3020 ECs3629
  Ype:  YPO0308_1 YPO1177 YPO1451 YPO2407_1
  Sty:  STM1365_1 STM2167
  Vch:  VC1198_1 VCA0985_1
  Pae:  PA0317 PA1416 PA3026 PA4140 PA4772_1 PA5327 PA5354
        PA5355
  Hin:  HI1163_1 HI1649
  Pmu:  PM0787_1
  Xfa:  XF0347 XF2205
  Nme:  NMB0997 NMB0998_1 NMB1524
  NmA:  NMA1205 NMA1206_1 NMA1724
  Rso:  RSc0050 RSc0172 RSc0454_1 RSc1556 RSc2664 RSc2666 RSc2667
  Hpy:  HP0509 HP1222_1
  jHp:  jhp0459 jhp1143_1
  Cje:  Cj1213c Cj1585c_1
  Atu:  AGc1189 AGc1191 AGc1314 AGc3718 AGc4965
  Sme:  SMa0244 SMb20097 SMb21129 SMb21415 SMc00779 SMc00832 SMc00833
        SMc00985 SMc01020 SMc01455 SMc04384
  Bme:  BMEI0599 BMEI1527 BMEII0185 BMEII0438 BMEII1062 BMEII1063 BMEII1064
  Mlo:  mll1265 mll1289 mll1488 mll2617 mll8576 mll8747 mlr6875
        mlr6916 mlr6919 mlr7184 mlr7440 mlr8207
  Ccr:  CC1219 CC3389
_______

[O] COG0278 Glutaredoxin-related protein
  Hbs:  VNG0450C
  Sce:  YDR098c_2 YER174c_2 YPL059w
  Spo:  SPAPB2B4.02 SPBC26H8.06_2
  Ecu:  ECU05g1380
  Syn:  slr1846
  Nos:  alr0799
  Eco:  ydhD
  EcZ:  ZydhD
  Ecs:  ECs2363
  Ype:  YPO2383
  Sty:  STM1433
  Buc:  BU187
  Vch:  VC2044
  Pae:  PA3533
  Hin:  HI1165
  Pmu:  PM0782
  Xfa:  XF2394_1 XF2669
  Nme:  NMB0773
  NmA:  NMA0984
  Rso:  RSc2904
  Atu:  AGc3401
  Sme:  SMc00538
  Bme:  BMEI1129
  Mlo:  mll0053
  Ccr:  CC2505
  Rpr:  RP745
  Rco:  RC1148
_______

[G] COG0279 Phosphoheptose isomerase
  Mja:  MJ1335
  Tac:  Ta0854
  Tvo:  TVN0956
  Aae:  aq_908
  Fnu:  FN0502
  Cac:  CAC3054
  Mtu:  Rv0113
  MtC:  MT0122_1
  Syn:  sll0083
  Eco:  gmhA yraO
  EcZ:  ZgmhA ZyraO
  Ecs:  ECs0249 ECs4030
  Ype:  YPO3243 YPO3550
  Sty:  STM0310 STM3266
  Buc:  BU250
  Vch:  VC0579 VC2230
  Pae:  PA4425
  Hin:  HI1181 HI1657
  Pmu:  PM0122 PM0648
  Nme:  NMB2090
  NmA:  NMA0340
  Hpy:  HP0857
  jHp:  jhp0791
  Cje:  Cj1149c Cj1424c
  Mlo:  mll2561
_______

[C] COG0280 Phosphotransacetylase
  Hbs:  VNG1624G_2
  Mac:  MA3607
  Tma:  TM1130 TM1755
  Fnu:  FN1172
  Dra:  DR0073_2
  Cac:  CAC1742 CAC3076
  Cgl:  Cgl2696
  Mtu:  Rv0408_2
  MtC:  MT0421_2
  Lla:  L107797
  Spy:  SPy1128
  Spn:  SP1100
  Sau:  SA0545
  Lin:  lin1406 lin2207
  Bsu:  BS_pta BS_yqiS
  Bha:  BH3823
  Syn:  slr2132_2
  Eco:  eutI maeB_2 pta_2
  EcZ:  Z3719_2 ZeutI Zpta_2
  Ecs:  ECs3181_2 ECs3320 ECs3325_2
  Ype:  YPO2567_2 YPO3034_2
  Sty:  STM2338_2 STM2466 STM2472_2
  Buc:  BU176_2
  Vch:  VC1097_2
  Pae:  PA0835_2
  Hin:  HI1203_2 HI1245_2
  Pmu:  PM0002_2 PM0705_2
  Xfa:  XF0977_2
  Nme:  NMB0631_2
  NmA:  NMA0841_2
  Rso:  RSc2123_2 RSc2767_2
  jHp:  jhp0841_2
  Cje:  Cj0688_2
  Atu:  AGc3042_2 AGl2933_2
  Sme:  SMb21532 SMc00169_2 SMc01126_2
  Bme:  BMEI0967_2 BMEI1803
  Mlo:  mlr0809_2 mlr5329_2
  Ccr:  CC2622_2 CC3549_2
  Rpr:  RP109 RP373_2
  Rco:  RC0147 RC0507_2
  Tpa:  TP0094
  Bbu:  BB0589
  Uur:  UU066
  Mpu:  MYPU_2370
  Mpn:  MPN428
  Mge:  MG299
_______

[C] COG0281 Malic enzyme
  Afu:  AF1727
  Hbs:  VNG1624G_1
  Mac:  MA1002 MA1735
  Tac:  Ta0456m
  Tvo:  TVN0768
  Pho:  PH1275
  Pab:  PAB1792
  Pya:  PAE1688
  Sso:  SSO2869
  Ape:  APE0392
  Sce:  YKL029c
  Spo:  SPAC750.08c SPCC794.12c
  Tma:  TM0542
  Dra:  DR2583 DRA0276
  Cac:  CAC1589 CAC1596
  Cgl:  Cgl2950
  Mtu:  Rv2332
  MtC:  MT2394
  Lla:  L121483 L3227
  Spy:  SPy1110
  Sau:  SA1524
  Lin:  lin2029
  Bsu:  BS_malS BS_mleA BS_ytsJ BS_ywkA
  Bha:  BH0399 BH3168
  Syn:  slr0721
  Nos:  alr4596
  Eco:  maeB_1 sfcA
  EcZ:  Z3719_1 ZsfcA
  Ecs:  ECs2083 ECs3325_1
  Ype:  YPO1511 YPO3034_1
  Sty:  STM1566 STM2472_1
  Vch:  VC1188 VC2681
  Pae:  PA3471 PA5046
  Hin:  HI1245_1
  Pmu:  PM0002_1
  Xfa:  XF0977_1
  Nme:  NMB0671
  NmA:  NMA0870
  Rso:  RSc2123_1 RSc2767_1
  Cje:  Cj1287c
  Atu:  AGc3042_1 AGl2933_1
  Sme:  SMc00169_1 SMc01126_1
  Bme:  BMEI0967_1 BMEI1802
  Mlo:  mlr0809_1 mlr5329_1
  Ccr:  CC2622_1 CC3549_1
  Rpr:  RP373_1
  Rco:  RC0507_1
_______

[C] COG0282 Acetate kinase
  Mac:  MA3606
  Tma:  TM0274
  Fnu:  FN1171
  Dra:  DR2602
  Cac:  CAC1743
  Cgl:  Cgl2695
  Mtu:  Rv0409
  MtC:  MT0422
  Lla:  L0224 L73818
  Spy:  SPy0109
  Spn:  SP2044
  Sau:  SA1533
  Lin:  lin1132 lin1616
  Bsu:  BS_ackA
  Bha:  BH3192
  Syn:  sll1299
  Nos:  all2561
  Eco:  ackA tdcD
  EcZ:  ZackA ZtdcD
  Ecs:  ECs3180 ECs3995
  Ype:  YPO2566
  Sty:  STM2057 STM2337 STM3242
  Buc:  BU175
  Vch:  VC1098 VCA0235
  Pae:  PA0836
  Hin:  HI1204
  Pmu:  PM0704
  Nme:  NMB0435 NMB1518
  NmA:  NMA1718 NMA2050
  Hpy:  HP0903m
  jHp:  jhp0840
  Cje:  Cj0689
  Sme:  SMb21184
  Bme:  BMEII0880
  Mlo:  mlr6576
  Rpr:  RP110
  Rco:  RC0148 RC0149 RC0150
  Tpa:  TP0476
  Bbu:  BB0622
  Uur:  UU484
  Mpu:  MYPU_2380
  Mpn:  MPN533
  Mge:  MG357
_______

[F] COG0283 Cytidylate kinase
  Ecu:  ECU03g1270
  Aae:  aq_2153
  Tma:  TM1443
  Fnu:  FN1607
  Dra:  DR2543
  Cac:  CAC1848
  Cgl:  Cgl1393
  Mtu:  Rv1712
  MtC:  MT1752
  Mle:  ML1371
  Lla:  L143791
  Spy:  SPy0803
  Spn:  SP1603
  Sau:  SA1309
  Lin:  lin2053
  Bsu:  BS_cmk
  Bha:  BH1634
  Syn:  sll1249_2
  Nos:  alr2936_2
  Eco:  cmk
  EcZ:  Zcmk
  Ecs:  ECs0993
  Ype:  YPO1391
  Sty:  STM0980
  Vch:  VC1916
  Pae:  PA3163
  Hin:  HI1219 HI1646m
  Pmu:  PM0802
  Xfa:  XF2439
  Nme:  NMB1300
  NmA:  NMA1514
  Rso:  RSc0908
  Atu:  AGl1498
  Sme:  SMc00334
  Bme:  BMEI1916
  Mlo:  mll5212
  Ccr:  CC3588
  Rpr:  RP522
  Rco:  RC0748
  Ctr:  CT452
  Cpn:  CPn0568
  Tpa:  TP0279_1
  Bbu:  BB0128
  Uur:  UU342
  Mpu:  MYPU_0890
  Mpn:  MPN476
  Mge:  MG330
_______

[F] COG0284 Orotidine-5'-phosphate decarboxylase
  Afu:  AF0929
  Hbs:  VNG1673G
  Mac:  MA0969
  Mth:  MTH129
  Mja:  MJ0252
  Mka:  MK0735
  Tac:  Ta0073
  Tvo:  TVN0028
  Pho:  PH0731
  Pab:  PAB1505
  Pya:  PAE0768
  Sso:  SSO0616
  Ape:  APE2348
  Sce:  YEL021w
  Spo:  SPCC330.05c
  Aae:  aq_1580
  Tma:  TM0332
  Fnu:  FN0426
  Dra:  DR2200_2
  Cac:  CAC2652
  Cgl:  Cgl1570
  Mtu:  Rv1385
  MtC:  MT1429
  Mle:  ML0537
  Lla:  L181692
  Spy:  SPy0900
  Spn:  SP0701
  Sau:  SA1047
  Lin:  lin1946
  Bsu:  BS_pyrF
  Bha:  BH2533
  Syn:  sll0838
  Nos:  alr2945_1 alr2983
  Eco:  pyrF
  EcZ:  ZpyrF
  Ecs:  ECs1854
  Ype:  YPO2227
  Sty:  STM1707
  Buc:  BU270
  Vch:  VC1911
  Pae:  PA2876
  Hin:  HI1224
  Pmu:  PM0797
  Xfa:  XF0034
  Nme:  NMB0824
  NmA:  NMA1033
  Rso:  RSc2773
  Hpy:  HP0005
  jHp:  jhp0005
  Cje:  Cj0381c
  Atu:  AGc515
  Sme:  SMc00412
  Bme:  BMEI1999
  Mlo:  mll4751
  Ccr:  CC0105
_______

[H] COG0285 Folylpolyglutamate synthase
  Hbs:  VNG0412G_1
  Tac:  Ta0637
  Tvo:  TVN0757
  Sce:  YKL132c YMR113w YOR241w
  Spo:  SPAC227.09 SPBC1709.17
  Aae:  aq_2045
  Tma:  TM0166
  Fnu:  FN1014
  Dra:  DR0340 DR2575
  Cac:  CAC2398
  Cgl:  Cgl2324
  Mtu:  Rv2447c
  MtC:  MT2523
  Mle:  ML1471
  Lla:  L0177
  Spy:  SPy0814 SPy1096
  Spn:  SP0197 SP0290
  Sau:  SA1487
  Lin:  lin1586
  Bsu:  BS_folC
  Bha:  BH3037
  Syn:  sll1612
  Nos:  alr1026
  Eco:  folC
  EcZ:  ZfolC
  Ecs:  ECs3199
  Ype:  YPO2769
  Sty:  STM2365
  Buc:  BU167
  Vch:  VC1001
  Pae:  PA3111
  Hin:  HI1261
  Pmu:  PM0635
  Xfa:  XF1946
  Nme:  NMB0693
  NmA:  NMA0896
  Rso:  RSc1979
  Hpy:  HP1545
  jHp:  jhp1454
  Cje:  Cj1088c
  Atu:  AGc35
  Sme:  SMc02763
  Bme:  BMEI2021
  Mlo:  mlr5076
  Ccr:  CC3541
  Rpr:  RP536
  Rco:  RC0779
  Tpa:  TP0340
_______

[V] COG0286 Type I restriction-modification system methyltransferase subunit
  Afu:  AF1715m
  Hbs:  VNG0106G
  Mac:  MA0485 MA2116 MA2414
  Mth:  MTH942
  Mja:  MJ0132 MJ0132a MJ1220 MJECL42
  Pab:  PAB2149 PAB2246
  Mtu:  Rv2756c
  MtC:  MT2826
  Lla:  L0309
  Spy:  SPy0676 SPy1470 SPy1906
  Spn:  SP0509 SP0886
  Sau:  SA0391 SA1626
  Lin:  lin0522 lin2410 lin2602
  Nos:  all2688_1 all2689 alr0499 alr3475 alr3620 alr4597
  Eco:  hsdM
  EcZ:  Z5947
  Ecs:  ECs5307
  Sty:  STM4525
  Vch:  VC1769
  Pae:  PA2735
  Hin:  HI1287
  Pmu:  PM1537
  Xfa:  XF2723 XF2724 XF2728 XF2742
  Nme:  NMB0829 NMB1257
  NmA:  NMA1038
  Rso:  RSc3396
  Hpy:  HP0463 HP0850 HP1403_1 HP1472
  jHp:  jhp0415 jhp0786 jhp1365 jhp1423_1
  Cje:  Cj1051c_1 Cj1553c
  Sme:  SMc02296
  Bme:  BMEII0451
  Ccr:  CC0620
  Rco:  RC1350
  Uur:  UU098 UU100
  Mpu:  MYPU_0810 MYPU_0820 MYPU_4330 MYPU_6780
  Mpn:  MPN342
_______

[E] COG0287 Prephenate dehydrogenase
  Afu:  AF0227_1
  Hbs:  VNG1235C
  Mac:  MA4595_1
  Mth:  MTH1640_1
  Mja:  MJ0612_1
  Mka:  MK0798
  Tac:  Ta0246m
  Tvo:  TVN1350
  Pya:  PAE1941
  Sso:  SSO0302_2
  Ape:  APE0562
  Sce:  YBR166c
  Spo:  SPCC1494.04c
  Aae:  aq_1755
  Tma:  TM0344
  Dra:  DR1122
  Cac:  CAC0893
  Cgl:  Cgl0227
  Mtu:  Rv3754
  MtC:  MT3861
  Mle:  ML2472
  Lla:  L0058
  Spn:  SP1373
  Sau:  SA1197
  Lin:  lin2038
  Bsu:  BS_tyrA
  Bha:  BH1666
  Syn:  slr2081
  Nos:  all0418 all1141
  Eco:  tyrA_2
  EcZ:  ZtyrA_2
  Ecs:  ECs3463_2
  Ype:  YPO3285_2
  Sty:  STM2669_2
  Vch:  VC0696_2
  Pae:  PA3164_1
  Hin:  HI1290_2
  Pmu:  PM0664_2
  Xfa:  XF2338_1
  Nme:  NMB0440
  NmA:  NMA2045
  Rso:  RSc0906
  Hpy:  HP1380
  jHp:  jhp1294
  Cje:  Cj0130
  Atu:  AGl2429
  Sme:  SMc00711
  Bme:  BMEI0079
  Mlo:  mll3535
  Ccr:  CC2224
_______

[P] COG0288 Carbonic anhydrase
  Hbs:  VNG0841G
  Mth:  MTH1582
  Pya:  PAE3678
  Sso:  SSO1214 SSO2735
  Sce:  YNL036w
  Spo:  SPBP8B7.05c
  Dra:  DR2238
  Cac:  CAC2482
  Cgl:  Cgl2616
  Mtu:  Rv1284 Rv3273_2 Rv3588c
  MtC:  MT1322 MT3373_2 MT3694
  Mle:  ML1919
  Spy:  SPy0237
  Spn:  SP0024
  Bsu:  BS_ybcF BS_ytiB BS_yvdA
  Bha:  BH3286
  Syn:  slr0051 slr1347
  Nos:  all2910
  Eco:  cynT yadF
  EcZ:  ZcynT ZyadF
  Ecs:  ECs0130 ECs0392
  Ype:  YPO0819 YPO3407
  Sty:  PSLT046 STM0171
  Vch:  VC0586
  Pae:  PA0102 PA2053 PA4676
  Hin:  HI1301
  Pmu:  PM0575
  Xfa:  XF0880
  Nme:  NMB2025
  NmA:  NMA0415
  Rso:  RSc0277 RSp0112
  Hpy:  HP0004
  jHp:  jhp0004
  Cje:  Cj0237
  Atu:  AGc4521
  Sme:  SMc04083
  Bme:  BMEI0222 BMEII0502
  Mlo:  mlr4135
  Ccr:  CC3569 CC3572
_______

[E] COG0289 Dihydrodipicolinate reductase
  Afu:  AF0909
  Mac:  MA4474
  Mth:  MTH800
  Mja:  MJ0422
  Mka:  MK1422
  Aae:  aq_916
  Tma:  TM1520
  Cac:  CAC2379
  Cgl:  Cgl1927
  Mtu:  Rv2773c
  MtC:  MT2843
  Lla:  L0094
  Spn:  SP1555
  Sau:  SA1228
  Lin:  lin2021
  Bsu:  BS_dapB
  Bha:  BH1680
  Syn:  sll1058
  Nos:  alr2542
  Eco:  dapB
  EcZ:  ZdapB
  Ecs:  ECs0034
  Ype:  YPO0480
  Sty:  STM0064
  Buc:  BU146
  Vch:  VC2391
  Pae:  PA4759
  Hin:  HI1308
  Pmu:  PM0726
  Xfa:  XF1105
  Nme:  NMB0203
  NmA:  NMA0066
  Rso:  RSc2745
  Hpy:  HP0510
  jHp:  jhp0460
  Cje:  Cj0197c
  Atu:  AGc307
  Sme:  SMc02837
  Bme:  BMEII0249
  Mlo:  mlr4642 mlr7948
  Ccr:  CC3550
  Rpr:  RP148
  Rco:  RC0190
  Ctr:  CT364
  Cpn:  CPn1047
_______

[J] COG0290 Translation initiation factor 3 (IF-3)
  Aae:  aq_1777
  Tma:  TM1590
  Fnu:  FN0327
  Dra:  DR2087
  Cac:  CAC2361
  Cgl:  Cgl1345
  Mtu:  Rv1641
  MtC:  MT1679
  Mle:  ML1394
  Lla:  L95240
  Spy:  SPy0804
  Spn:  SP0959
  Sau:  SA1504
  Lin:  lin1897
  Bsu:  BS_infC
  Bha:  BH3140
  Syn:  slr0974
  Nos:  all2368 all4623
  Eco:  infC
  EcZ:  ZinfC
  Ecs:  ECs2425
  Ype:  YPO2432
  Sty:  STM1334
  Buc:  BU126
  Vch:  VCA0288
  Pae:  PA2743
  Hin:  HI1318m
  Pmu:  PM0602
  Xfa:  XF0737
  Nme:  NMB0721
  NmA:  NMA0930
  Rso:  RSc1578
  Hpy:  HP0124
  jHp:  jhp0114
  Cje:  Cj0207
  Atu:  AGc436
  Sme:  SMc00362
  Bme:  BMEI2010
  Mlo:  mll5061
  Ccr:  CC1049
  Rpr:  RP531
  Rco:  RC0765
  Ctr:  CT833
  Cpn:  CPn0990
  Tpa:  TP0850
  Bbu:  BB0190
  Uur:  UU227
  Mpu:  MYPU_2590
  Mpn:  MPN115
  Mge:  MG196
_______

[J] COG0291 Ribosomal protein L35
  Sce:  YNL122c_2
  Aae:  aq_792a
  Tma:  TM1591
  Fnu:  FN0326
  Dra:  DR2005
  Cac:  CAC2360
  Cgl:  Cgl1346
  Mtu:  Rv1642
  MtC:  MT1680
  Mle:  ML1395
  Lla:  L0430
  Spy:  SPy0805
  Spn:  SP0960
  Sau:  SA1503
  Lin:  lin1896
  Bsu:  BS_rpmI
  Bha:  BH3139
  Syn:  ssl1426
  Nos:  asr3427
  Eco:  rpmI
  EcZ:  ZrpmI
  Ecs:  ECs2424
  Ype:  YPO2431
  Sty:  STM1335
  Buc:  BU127
  Vch:  VCA0289
  Pae:  PA2742
  Hin:  HI1319m
  Pmu:  PM0603
  Xfa:  XF0739
  Nme:  NMB0722
  NmA:  NMA0931
  Rso:  RSc1579
  Hpy:  HP0125
  jHp:  jhp0115
  Cje:  Cj0244
  Atu:  AGc437
  Sme:  SMc00363
  Bme:  BMEI2008
  Mlo:  msl5059
  Ccr:  CC1046
  Rpr:  RP608
  Rco:  RC0934
  Ctr:  CT834
  Cpn:  CPn0991
  Tpa:  TP0849
  Bbu:  BB0189
  Uur:  UU228
  Mpu:  MYPU_2600
  Mpn:  MPN116
  Mge:  MG197
_______

[J] COG0292 Ribosomal protein L20
  Aae:  aq_952
  Tma:  TM1592
  Fnu:  FN0325
  Dra:  DR2004
  Cac:  CAC2359
  Cgl:  Cgl1347
  Mtu:  Rv1643
  MtC:  MT1681
  Mle:  ML1396
  Lla:  L0416
  Spy:  SPy0806
  Spn:  SP0961
  Sau:  SA1502
  Lin:  lin1895
  Bsu:  BS_rplT
  Bha:  BH3138
  Syn:  sll0767
  Nos:  alr3428
  Eco:  rplT
  EcZ:  ZrplT
  Ecs:  ECs2423
  Ype:  YPO2430
  Sty:  STM1336
  Buc:  BU128
  Vch:  VCA0290
  Pae:  PA2741
  Hin:  HI1320
  Pmu:  PM0604
  Xfa:  XF0740
  Nme:  NMB0723
  NmA:  NMA0932
  Rso:  RSc1580
  Hpy:  HP0126
  jHp:  jhp0116
  Cje:  Cj0245
  Atu:  AGc439
  Sme:  SMc00364
  Bme:  BMEI2007
  Mlo:  mll5057
  Ccr:  CC1045
  Rpr:  RP609
  Rco:  RC0935
  Ctr:  CT835
  Cpn:  CPn0992
  Tpa:  TP0848
  Bbu:  BB0188
  Uur:  UU229
  Mpu:  MYPU_2610
  Mpn:  MPN117
  Mge:  MG198
_______

[J] COG0293 23S rRNA methylase
  Afu:  AF2051
  Hbs:  VNG2263G_1
  Mac:  MA1288_1
  Mth:  MTH1773
  Mja:  MJ1257_2 MJ1376
  Mka:  MK0344_2 MK1641
  Tac:  Ta1365
  Tvo:  TVN0289
  Sce:  YBR061c YCL054w YGL136c
  Spo:  SPAC1687.11 SPAC4F10.03c SPBC2G2.15c
  Ecu:  ECU09g0920 ECU07g1340
  Eco:  ftsJ
  EcZ:  ZftsJ
  Ecs:  ECs4058
  Ype:  YPO3503
  Sty:  STM3297
  Buc:  BU383
  Vch:  VC0636
  Pae:  PA4752
  Hin:  HI1334
  Pmu:  PM0437
  Xfa:  XF0094
  Nme:  NMB0799
  NmA:  NMA1008
  Rso:  RSc1525
  Atu:  AGc1101
  Sme:  SMc00811
  Bme:  BMEII0597
  Mlo:  mlr8347
  Ccr:  CC1615
  Rpr:  RP163
  Rco:  RC0205
  Tpa:  TP0682
  Bbu:  BB0313
_______

[H] COG0294 Dihydropteroate synthase and related enzymes
  Afu:  AF1414
  Hbs:  VNG0412G_2 VNG1344G
  Mac:  MA3516 MA3877
  Mth:  MTH1741
  Mja:  MJ0107
  Mka:  MK1483
  Tac:  Ta0079
  Tvo:  TVN0153
  Pho:  PH0280
  Pab:  PAB0175
  Pya:  PAE2937
  Sso:  SSO2415
  Ape:  APE0803 APE2438
  Sce:  YNL256w_3
  Spo:  SPBC1734.03_3
  Aae:  aq_1468
  Tma:  TM0040
  Fnu:  FN0073
  Dra:  DR0168
  Cac:  CAC2926
  Cgl:  Cgl1087 Cgl2638
  Mtu:  Rv1207 Rv3608c
  MtC:  MT1245 MT3712
  Mle:  ML0224 ML1063
  Lla:  L0176
  Spy:  SPy1098
  Spn:  SP0289
  Sau:  SA0472
  Lin:  lin0256
  Bsu:  BS_sul
  Bha:  BH0093
  Syn:  slr0651 slr2026
  Nos:  all4101 alr4386
  Eco:  folP
  EcZ:  ZfolP
  Ecs:  ECs4056
  Ype:  YPO3501
  Sty:  STM3295
  Vch:  VC0638
  Pae:  PA4750
  Hin:  HI1336 HI1464
  Pmu:  PM0439
  Xfa:  XF0091
  Nme:  NMB1691
  NmA:  NMA1950
  Rso:  RSc1527
  Hpy:  HP1232
  jHp:  jhp1153
  Cje:  Cj0585
  Atu:  AGc2497
  Sme:  SMc00462
  Bme:  BMEI0956
  Mlo:  mll0788
  Ccr:  CC3224
  Rco:  RC0035 RC0036 RC0037_2
  Ctr:  CT613_2
  Cpn:  CPn0758_2
_______

[F] COG0295 Cytidine deaminase
  Hbs:  VNG0896G
  Pya:  PAE0794
  Ape:  APE1038
  Sce:  YLR245c
  Spo:  SPAC1556.04c
  Tma:  TM0846
  Dra:  DR2177
  Cac:  CAC1544 CAC2609
  Mtu:  Rv3315c
  MtC:  MT3416
  Mle:  ML2174
  Lla:  L62931
  Spy:  SPy1230
  Spn:  SP0844 SP2068
  Sau:  SA1397
  Lin:  lin1500
  Bsu:  BS_cdd
  Bha:  BH1366
  Eco:  cdd
  EcZ:  Zcdd
  Ecs:  ECs3035
  Ype:  YPO1512
  Sty:  STM2183
  Vch:  VC1231
  Hin:  HI1350
  Pmu:  PM0259
  Atu:  AGc209
  Sme:  SMc04124
  Mlo:  mlr3158
  Ccr:  CC3012
  Bbu:  BB0618
  Uur:  UU531
  Mpu:  MYPU_3790
  Mpn:  MPN065
  Mge:  MG052
_______

[G] COG0296 1,4-alpha-glucan branching enzyme
  Mac:  MA3032
  Sso:  SSO2093
  Sce:  YEL011w
  Aae:  aq_722
  Fnu:  FN0856
  Dra:  DR0464 DR1848
  Cgl:  Cgl1196 Cgl2075
  Mtu:  Rv1326c Rv1562c
  MtC:  MT1368 MT1613
  Spn:  SP1121
  Bsu:  BS_glgB
  Syn:  sll0158
  Nos:  all0168 all0713 all0875
  Eco:  glgB
  EcZ:  ZglgB
  Ecs:  ECs4277
  Ype:  YPO3942
  Sty:  STM1560 STM3538
  Vch:  VCA0016
  Pae:  PA2153 PA2164
  Hin:  HI1357
  Pmu:  PM0541
  Rso:  RSp0237 RSp0239
  Atu:  AGl1558 AGpA409
  Sme:  SMb21447 SMc03922
  Mlo:  mlr7587
  Ctr:  CT866
  Cpn:  CPn0475
_______

[G] COG0297 Glycogen synthase
  Mja:  MJ1606
  Pho:  PH0069
  Pab:  PAB2292
  Pya:  PAE3429
  Sso:  SSO0987
  Spo:  SPBC16D10.05_3 SPBC32H8.13c_3 SPCC63.04_2
  Aae:  aq_721
  Tma:  TM0895
  Fnu:  FN0853
  Dra:  DR0594
  Cac:  CAC2239
  Lla:  L98347
  Spn:  SP1124
  Bsu:  BS_glgA
  Bha:  BH1085
  Syn:  sll0945 sll1393
  Nos:  alr0031 alr1879
  Eco:  glgA
  EcZ:  ZglgA
  Ecs:  ECs4274
  Ype:  YPO3939
  Sty:  STM3535
  Vch:  VC1726
  Pae:  PA2165
  Hin:  HI1360
  Pmu:  PM0544
  Rso:  RSp0242
  Atu:  AGl1562 AGpA410
  Sme:  SMb20704 SMc03924
  Mlo:  mlr7589
  Ctr:  CT798
  Cpn:  CPn0948
_______

[O] COG0298 Hydrogenase maturation factor
  Afu:  AF1369
  Mac:  MA1140
  Mth:  MTH1649
  Mja:  MJ0200
  Mka:  MK0227
  Pho:  PH0878a
  Pab:  PAB7315
  Cac:  CAC0808
  Syn:  ssl3580
  Nos:  asr0695
  Eco:  hybG hypC
  EcZ:  ZhybG ZhypC
  Ecs:  ECs3584 ECs3875
  Sty:  STM2856 STM3143
  Hin:  HI1390
  Hpy:  HP0899
  jHp:  jhp0836
  Cje:  Cj0624
_______

[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN
  Hbs:  VNG0414G_1
  Mac:  MA0316 MA3522
  Tac:  Ta0082
  Tvo:  TVN0171
  Pya:  PAE0219
  Sce:  YDR408c
  Spo:  SPCC24E4.01
  Aae:  aq_857
  Tma:  TM1248
  Fnu:  FN0985
  Dra:  DR2026
  Cac:  CAC1394
  Cgl:  Cgl0837
  Mtu:  Rv0956
  MtC:  MT0983
  Mle:  ML0160
  Lla:  L164626
  Spy:  SPy0028
  Spn:  SP0048
  Sau:  SA0924
  Lin:  lin1878
  Bsu:  BS_purN
  Bha:  BH0632
  Syn:  slr0477
  Nos:  all0788
  Eco:  purN
  EcZ:  ZpurN
  Ecs:  ECs3362
  Ype:  YPO2829
  Sty:  STM2500
  Vch:  VC2227
  Pae:  PA0944
  Hin:  HI1428
  Pmu:  PM0020
  Xfa:  XF0585
  Nme:  NMB1566
  NmA:  NMA1755
  Rso:  RSc2454
  Cje:  Cj0187c
  Atu:  AGc2109
  Sme:  SMc00614
  Bme:  BMEI1241
  Mlo:  mll7961
  Ccr:  CC1702
_______

[R] COG0300 Short-chain dehydrogenases of various substrate specificities
  Mac:  MA2091
  Pab:  PAB0328
  Sso:  SSO1030
  Sce:  YBR159w
  Spo:  SPAC4G9.15
  Ecu:  ECU08g1150
  Fnu:  FN1844
  Cac:  CAC2992 CAP0001 CAP0051
  Cgl:  Cgl2420
  Mtu:  Rv1544 Rv2509
  MtC:  MT1596 MT2584
  Mle:  ML0429
  Lla:  L19516
  Spy:  SPy0925
  Spn:  SP0675
  Sau:  SA1333
  Lin:  lin0805 lin1621 lin2083
  Bsu:  BS_yqjQ
  Bha:  BH1506
  Nos:  all2891 all3753
  Pae:  PA0658 PA4832
  Pmu:  PM0916
  Rso:  RSc2321
  Atu:  AGl1280 AGl2733 AGpA651
  Sme:  SMb20214 SMc01204
  Mlo:  mll2507 mll6686
  Ccr:  CC0133 CC2337
_______

[H] COG0301 Thiamine biosynthesis ATP pyrophosphatase
  Afu:  AF0879
  Hbs:  VNG1299C
  Mac:  MA1466
  Mth:  MTH1685
  Mja:  MJ0931
  Mka:  MK0778 MK0908
  Tac:  Ta0506m_1
  Tvo:  TVN0790_1
  Pho:  PH1313 PH1786
  Pab:  PAB0226 PAB0561
  Pya:  PAE3421_1
  Sso:  SSO0333
  Ape:  APE0465
  Tma:  TM1694
  Cac:  CAC2971
  Lla:  L183112
  Spy:  SPy0817
  Spn:  SP0881
  Sau:  SA1537
  Lin:  lin1634
  Bsu:  BS_ytbJ
  Bha:  BH3203
  Eco:  thiI_1
  EcZ:  ZyajK_1
  Ecs:  ECs0477_1
  Ype:  YPO3173_1
  Sty:  STM0425_1
  Vch:  VC0894_1
  Pae:  PA5118_1
  Hin:  HI1436.1_1
  Pmu:  PM0535_1
  Tpa:  TP0559
  Uur:  UU418
  Mpu:  MYPU_7180
  Mpn:  MPN550
  Mge:  MG372
_______

[H] COG0302 GTP cyclohydrolase I
  Pya:  PAE1588
  Sso:  SSO0364
  Sce:  YGR267c
  Spo:  SPAC17A5.13
  Aae:  aq_239
  Fnu:  FN0071
  Dra:  DR0036
  Cac:  CAC3626
  Cgl:  Cgl2639
  Mtu:  Rv3609c
  MtC:  MT3713
  Mle:  ML0223
  Lla:  L0175_2
  Spy:  SPy1097
  Spn:  SP0291
  Lin:  lin2047
  Bsu:  BS_mtrA
  Bha:  BH1646
  Syn:  slr0426
  Nos:  all4721 alr5287
  Eco:  folE
  EcZ:  ZfolE
  Ecs:  ECs3045
  Ype:  YPO1505
  Sty:  STM2193
  Vch:  VCA0616
  Pae:  PA1674 PA3438
  Hin:  HI1447
  Pmu:  PM0693
  Xfa:  XF1983
  Rso:  RSc1387
  Hpy:  HP0928
  jHp:  jhp0862 jhp0863
  Cje:  Cj0194
  Atu:  AGc3211
  Sme:  SMc01005
  Bme:  BMEI0910
  Mlo:  mlr0922
  Ccr:  CC0459
  Rpr:  RP383
  Rco:  RC0527
_______

[H] COG0303 Molybdopterin biosynthesis enzyme
  Afu:  AF0161 AF0930 AF0931_1
  Hbs:  VNG0086Gm_1 VNG0090G
  Mac:  MA4087 MA4350_1
  Mth:  MTH1003 MTH1369
  Mja:  MJ0666 MJ0886_1
  Mka:  MK1524
  Tac:  Ta1022_1 Ta1023
  Tvo:  TVN0566 TVN0567_1
  Pho:  PH0582 PH1647
  Pab:  PAB1436 PAB2014
  Pya:  PAE3048 PAE3465_1 PAE3466
  Sso:  SSO0676 SSO2365
  Ape:  APE0177 APE0450
  Aae:  aq_030
  Dra:  DR0076
  Cac:  CAC2020_1 CAC2021
  Cgl:  Cgl0213 Cgl0858 Cgl1170
  Mtu:  Rv0438c Rv0994
  MtC:  MT0454 MT1023
  Mle:  ML0183
  Sau:  SA2068
  Lin:  lin1034
  Bsu:  BS_moeA
  Bha:  BH3021
  Syn:  slr0900
  Nos:  all5136
  Eco:  moeA
  EcZ:  ZmoeA
  Ecs:  ECs0905
  Ype:  YPO1495
  Sty:  STM0846
  Vch:  VC1527_2 VCA0617
  Pae:  PA3028 PA3914
  Hin:  HI1448
  Pmu:  PM0694
  Rso:  RSc1037 RSc1330
  Hpy:  HP0172
  jHp:  jhp0158
  Cje:  Cj0857c Cj1519
  Atu:  AGc3105
  Sme:  SMc00238 SMc00519_1
  Bme:  BMEI0841 BMEI1902
  Mlo:  mlr0093_1 mlr0617
  Ccr:  CC3209
_______

[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase
  Sce:  YER061c YPL231w_3
  Spo:  SPAC4A8.11c_3 SPBC887.13c
  Aae:  aq_1717
  Tma:  TM0802
  Fnu:  FN0151
  Dra:  DR1941
  Cac:  CAC2008 CAC3573 CAP0088
  Cgl:  Cgl0813_6 Cgl2444_6
  Mtu:  Rv2245 Rv2246 Rv2524c_6
  MtC:  MT2305 MT2306 MT2600_6
  Mle:  ML1191_6 ML1655 ML1656
  Lla:  L0186
  Spy:  SPy1748
  Spn:  SP0422
  Sau:  SA0843
  Lin:  lin2304
  Bsu:  BS_pksF BS_yjaY
  Bha:  BH1840 BH2882
  Syn:  sll1069 slr1332
  Nos:  all4286 alr3343
  Eco:  fabB fabF
  EcZ:  Z1549 Z1550 Z4863 Z4866 ZfabB ZfabF
  Ecs:  ECs1289 ECs1290 ECs1473 ECs3207 ECs4338 ECs4341
  Ype:  YPO1455 YPO1601 YPO2757
  Sty:  STM1197 STM2378
  Buc:  BU092
  Vch:  VC2019
  Pae:  PA0098 PA1373 PA1609 PA2965 PA5174
  Hin:  HI1533
  Pmu:  PM0339
  Xfa:  XF0673 XF1639
  Nme:  NMB0219 NMB1703
  NmA:  NMA0044 NMA1957
  Rso:  RSc0427 RSc1054 RSp0357 RSp0358 RSp0361
  Hpy:  HP0558
  jHp:  jhp0505
  Cje:  Cj0442
  Atu:  AGc2030 AGc244 AGc2934 AGc2935 AGl1284
  Sme:  SMa0853 SMc00327 SMc00574 SMc04273 SMc04275
  Bme:  BMEI1112 BMEI1113 BMEI1473 BMEI1957
  Mlo:  mll5566 mlr1176 mlr1177 mlr2352 mlr2832 mlr4953 mlr5822
        mlr7852
  Ccr:  CC1678 CC3719
  Rpr:  RP764
  Rco:  RC1186
  Ctr:  CT770
  Cpn:  CPn0916
_______

[L] COG0305 Replicative DNA helicase
  Aae:  aq_1472
  Tma:  TM1736
  Fnu:  FN1827
  Dra:  DR0549
  Cac:  CAC1192 CAC3715
  Cgl:  Cgl2923
  Mtu:  Rv0058_1 Rv0058_3
  MtC:  MT0064_1 MT0064_3
  Mle:  ML2680
  Lla:  L0286
  Spy:  SPy2182
  Spn:  SP2203
  Sau:  SA0015
  Lin:  lin0047
  Bsu:  BS_dnaC BS_yorI
  Bha:  BH4029
  Syn:  slr0833_1 slr0833_3
  Nos:  all0578_1 all0578_3 all7274
  Eco:  dnaB
  EcZ:  ZdnaB
  Ecs:  ECs1190 ECs5034
  Ype:  YPO0320 YPO1869
  Sty:  STM4246
  Buc:  BU546
  Vch:  VC0371
  Pae:  PA4931
  Hin:  HI1574
  Pmu:  PM0412
  Xfa:  XF0361
  Nme:  NMB0494 NMB0885
  NmA:  NMA1105
  Rso:  RSc1311
  Hpy:  HP1362
  jHp:  jhp1280
  Cje:  Cj0562
  Atu:  AGc2006 AGl882
  Sme:  SMc00561 SMc01749
  Bme:  BMEI1485
  Mlo:  mll7836
  Ccr:  CC1665
  Rpr:  RP542
  Rco:  RC0803
  Ctr:  CT497
  Cpn:  CPn0616
  Tpa:  TP0058
  Bbu:  BB0111 BBG32
  Uur:  UU550
  Mpu:  MYPU_5150
  Mpn:  MPN232
  Mge:  MG094
_______

[P] COG0306 Phosphate/sulphate permeases
  Afu:  AF0791 AF1798
  Hbs:  VNG0753G VNG2307C VNG6064G VNG6196G VNG6250G VNG6462G VNG7047
        VNG7162
  Mac:  MA2935
  Mth:  MTH1885
  Mja:  MJ0630
  Mka:  MK0561
  Tac:  Ta0017
  Tvo:  TVN0063 TVN1459
  Pho:  PH0640 PH1131
  Pab:  PAB0927 PAB1652
  Pya:  PAE1884
  Sso:  SSO2461
  Sce:  YBR296c
  Tma:  TM0261 TM0917
  Dra:  DR0925
  Cac:  CAC3093
  Cgl:  Cgl0455
  Mtu:  Rv0545c Rv2281
  MtC:  MT0570 MT2339
  Mle:  ML2260
  Sau:  SA0619
  Lin:  lin0428 lin2351
  Bsu:  BS_cysP BS_ykaB
  Bha:  BH1488
  Nos:  alr2336 alr3096
  Eco:  pitA pitB
  EcZ:  ZpitA ZpitB
  Ecs:  ECs3872 ECs4365
  Ype:  YPO3967
  Sty:  STM3589
  Buc:  BU587
  Vch:  VC2442
  Pae:  PA0450 PA4292 PA5207
  Hin:  HI1604
  Pmu:  PM0249
  Nme:  NMB0378
  NmA:  NMA2109
  Rso:  RSc1313
  Hpy:  HP1491
  jHp:  jhp1384
  Cje:  Cj1194
  Atu:  AGc1171 AGl500
  Sme:  SMc00827 SMc02861
  Mlo:  mll3637 mlr8370
  Ctr:  CT692
  Cpn:  CPn0680
_______

[H] COG0307 Riboflavin synthase alpha chain
  Hbs:  VNG2624G
  Sce:  YBR256c
  Spo:  SPCC1450.13c
  Aae:  aq_1707
  Tma:  TM1827
  Fnu:  FN1507
  Dra:  DR0154
  Cac:  CAC0591
  Cgl:  Cgl1558
  Mtu:  Rv1412
  MtC:  MT1456
  Mle:  ML0558
  Lla:  L0164
  Spn:  SP0177
  Sau:  SA1588
  Bsu:  BS_ribB
  Bha:  BH1555
  Syn:  sll0300
  Nos:  all5258
  Eco:  ribC
  EcZ:  ZribE
  Ecs:  ECs2371
  Ype:  YPO2391
  Sty:  STM1426
  Buc:  BU112
  Vch:  VC2270
  Pae:  PA4055
  Hin:  HI1613
  Pmu:  PM0650
  Xfa:  XF0952
  Nme:  NMB1247
  NmA:  NMA1416
  Rso:  RSc0714
  Hpy:  HP1574
  jHp:  jhp1482
  Cje:  Cj1218c
  Atu:  AGc2161
  Sme:  SMc01773
  Bme:  BMEI1188
  Mlo:  mlr8407
  Ccr:  CC0886
  Ctr:  CT405
  Cpn:  CPn0532
_______

[E] COG0308 Aminopeptidase N
  Mac:  MA1605
  Tac:  Ta0301 Ta0815
  Tvo:  TVN0800 TVN1299
  Pya:  PAE1597
  Sso:  SSO2154 SSO2675
  Sce:  YHR047c YIL137c YKL157w YNL045w
  Spo:  SPBC1921.05 SPCC1322.05c
  Ecu:  ECU01g0140 ECU01g1470 ECU08g0070
  Dra:  DR0875
  Cgl:  Cgl0338 Cgl2372
  Mtu:  Rv2467
  MtC:  MT2542
  Mle:  ML1486
  Lla:  L102360
  Spy:  SPy1239
  Spn:  SP0797
  Syn:  sll1343
  Nos:  all0594 all2670
  Eco:  pepN
  EcZ:  ZpepN
  Ecs:  ECs1015
  Ype:  YPO1414
  Sty:  STM1057
  Vch:  VC1494
  Pae:  PA3083
  Hin:  HI1614
  Pmu:  PM0618
  Xfa:  XF1488
  Nme:  NMB1416
  NmA:  NMA1627
  Rso:  RSc2125 RSp0532
  Atu:  AGc1803
  Sme:  SMc02370
  Bme:  BMEI1324
  Mlo:  mll7701
  Ccr:  CC1144 CC2198 CC2481 CC3565
_______

[O] COG0309 Hydrogenase maturation factor
  Afu:  AF1365
  Hbs:  VNG0164G VNG6299G
  Mac:  MA1136
  Mth:  MTH205
  Mja:  MJ0676
  Mka:  MK1544
  Tac:  Ta1278
  Tvo:  TVN0509
  Pho:  PH0739 PH1573
  Pab:  PAB0403 PAB0868
  Pya:  PAE0949
  Sso:  SSO0052 SSO2708
  Ape:  APE2044
  Aae:  aq_1019
  Cac:  CAC0809
  Syn:  sll1462
  Nos:  alr0698
  Eco:  hypE
  EcZ:  ZhypE
  Ecs:  ECs3586
  Sty:  STM2858
  Hpy:  HP0047
  jHp:  jhp0040
  Cje:  Cj0626
_______

[P] COG0310 ABC-type Co2+ transport system, permease component
  Afu:  AF0728 AF1843
  Hbs:  VNG1635G
  Mac:  MA3554 MA4023 MA4583
  Mth:  MTH130 MTH1706 MTH1707 MTH200
  Mja:  MJ1091 MJ1569 MJ1570
  Mka:  MK0180
  Cac:  CAC0771 CAC1365
  Lin:  lin1167
  Syn:  sll0383
  Nos:  alr3943 alr3947
  Sty:  STM2023
  Hin:  HI1621
  Bme:  BMEI0639 BMEI0640
_______

[H] COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis
  Afu:  AF0509
  Hbs:  VNG2598G
  Mac:  MA1566
  Mth:  MTH190
  Mja:  MJ1661
  Mka:  MK1062
  Tac:  Ta0009
  Tvo:  TVN0057
  Pho:  PH1354
  Pab:  PAB0538
  Pya:  PAE2820
  Sso:  SSO0571
  Ape:  APE0244
  Sce:  YFL060c YMR095c YNL334c
  Spo:  SPAC222.08c
  Tma:  TM0472
  Dra:  DR1366
  Cac:  CAC0595
  Cgl:  Cgl0765
  Mtu:  Rv2604c
  MtC:  MT2679
  Mle:  ML0474
  Spn:  SP1467
  Sau:  SA0478
  Lin:  lin2206
  Bsu:  BS_yaaE
  Bha:  BH0023
  Hin:  HI1648
  Pmu:  PM1233
_______

[R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs
  Afu:  AF0655 AF0656
  Mac:  MA3287 MA3288
  Mth:  MTH1070 MTH856
  Mja:  MJ0231 MJ0996
  Mka:  MK0957 MK0958
  Tac:  Ta0813 Ta0814
  Tvo:  TVN0798 TVN0799
  Pho:  PH0246 PH0249 PH0848 PH0849 PH1557 PH1558
  Pab:  PAB0154 PAB0155 PAB1547 PAB1548 PAB1955 PAB1956
  Pya:  PAE2918 PAE2919
  Sso:  SSO0478 SSO0660 SSO0661 SSO1151 SSO1152
  Ape:  APE0089 APE0091
  Aae:  aq_1871 aq_2021
  Tma:  TM0726 TM0727
  Dra:  DRC0038
  Cac:  CAC0229 CAC0230 CAC1828 CAC1829
  Mtu:  Rv2314c Rv2315c
  MtC:  MT2377 MT2378
  Bha:  BH2036 BH2037
  Syn:  sll0887 slr0863 slr1322 slr1435
  Nos:  all1089 all1090 all5218 all5219 alr1753 alr4890
  Eco:  pmbA tldD
  EcZ:  ZpmbA ZtldD
  Ecs:  ECs4117 ECs5212
  Ype:  YPO3672 YPO3692
  Sty:  STM3368 STM4438
  Buc:  BU089 BU398
  Vch:  VC0422 VC2535
  Pae:  PA2529 PA2530 PA4472 PA4474
  Hin:  HI1152 HI1653
  Pmu:  PM0120 PM0343
  Xfa:  XF1127 XF1131
  Nme:  NMB0839 NMB2066
  NmA:  NMA0367 NMA1048
  Rso:  RSc0945 RSc2659
  Atu:  AGc1248 AGc1392
  Sme:  SMc00897 SMc00960
  Bme:  BMEI1468 BMEII1033
  Mlo:  mll7487 mlr8264
  Ccr:  CC0309 CC2823 CC2824 CC3411
_______

[R] COG0313 Predicted methyltransferases
  Aae:  aq_1111
  Tma:  TM0709
  Fnu:  FN1204
  Dra:  DR0636
  Cac:  CAC0307
  Cgl:  Cgl0866
  Mtu:  Rv1003
  MtC:  MT1032
  Mle:  ML0193
  Lla:  L6615
  Spy:  SPy0406
  Spn:  SP0938
  Sau:  SA0447
  Lin:  lin0210
  Bsu:  BS_yabC
  Bha:  BH0049
  Syn:  sll0818
  Nos:  all4680
  Eco:  yraL
  EcZ:  ZyraL
  Ecs:  ECs4027
  Ype:  YPO3547
  Sty:  STM3263
  Buc:  BU091
  Vch:  VC0582
  Pae:  PA4422
  Hin:  HI1654
  Pmu:  PM0645
  Xfa:  XF0552
  Nme:  NMB1908 NMB2088
  NmA:  NMA0342 NMA0547
  Rso:  RSc1045 RSc3266
  Hpy:  HP0552
  jHp:  jhp0499
  Cje:  Cj0154c
  Atu:  AGc523
  Sme:  SMc00416
  Bme:  BMEI1770
  Mlo:  mlr4632
  Ccr:  CC0144
  Rpr:  RP747
  Rco:  RC1158
  Ctr:  CT048
  Cpn:  CPn0382
  Tpa:  TP0975
  Bbu:  BB0427
  Uur:  UU195
  Mpu:  MYPU_0540
  Mpn:  MPN071
  Mge:  MG056
_______

[H] COG0314 Molybdopterin converting factor, large subunit
  Afu:  AF2179
  Hbs:  VNG0081G_2
  Mac:  MA1978_2
  Mth:  MTH149
  Mja:  MJ0717
  Tac:  Ta1480
  Tvo:  TVN0087
  Pho:  PH0184
  Pab:  PAB0110
  Pya:  PAE0727_2
  Sso:  SSO2394_2
  Ape:  APE0603
  Aae:  aq_2181
  Dra:  DR2607_2
  Cgl:  Cgl0210
  Mtu:  Rv0866 Rv3119 Rv3323c_2
  MtC:  MT0889 MT3201 MT3424_2
  Sau:  SA2066
  Lin:  lin1036
  Bsu:  BS_moaE
  Bha:  BH3019
  Syn:  slr0903
  Nos:  all1638
  Eco:  moaE
  EcZ:  ZmoaE
  Ecs:  ECs0863
  Ype:  YPO1162
  Sty:  STM0806
  Vch:  VC1028
  Pae:  PA3916
  Hin:  HI1673
  Pmu:  PM0622
  Rso:  RSc1332
  Hpy:  HP0800
  jHp:  jhp0736
  Cje:  Cj1518
  Atu:  AGc2084
  Sme:  SMc00599
  Bme:  BMEI1254
  Mlo:  mlr7915
  Ccr:  CC0016
_______

[H] COG0315 Molybdenum cofactor biosynthesis enzyme
  Afu:  AF2150
  Hbs:  VNG1273G
  Mac:  MA1168
  Mth:  MTH809
  Mja:  MJ1135
  Mka:  MK0554
  Tac:  Ta0492
  Tvo:  TVN0749
  Pho:  PH1811
  Pab:  PAB2103
  Pya:  PAE0799
  Sso:  SSO0770
  Ape:  APE1350
  Aae:  aq_527
  Dra:  DR2571
  Cac:  CAC1992
  Cgl:  Cgl0212
  Mtu:  Rv0864 Rv3111 Rv3324c
  MtC:  MT0887 MT3194 MT3425
  Sau:  SA2069
  Lin:  lin1038
  Bsu:  BS_ydiG
  Bha:  BH3023
  Syn:  slr0902_1
  Nos:  alr3382
  Eco:  moaC
  EcZ:  ZmoaC
  Ecs:  ECs0861
  Ype:  YPO1160
  Sty:  STM0804
  Vch:  VC1026
  Pae:  PA3918
  Hin:  HI1675
  Pmu:  PM0624
  Rso:  RSc0560
  Hpy:  HP0798
  jHp:  jhp0734
  Cje:  Cj0252
  Atu:  AGc3103
  Sme:  SMc00237
  Bme:  BMEI0842
  Mlo:  mlr0616
  Ccr:  CC0014
_______

[S] COG0316 Uncharacterized conserved protein
  Mac:  MA0903
  Sce:  YLL027w_2 YPR067w
  Spo:  SPBC3B9.17 SPCC645.03c
  Aae:  aq_1857
  Dra:  DR0051 DR0439
  Cgl:  Cgl2149
  Mtu:  Rv2204c
  MtC:  MT2260
  Mle:  ML0871
  Sau:  SA0801
  Bsu:  BS_yutM
  Bha:  BH3410
  Syn:  slr1417 slr1565
  Nos:  all1431 all4341 alr2385
  Eco:  iscA yadR ydiC yhgI_1
  EcZ:  ZyadR ZydiC ZyfhF ZyhgI_1
  Ecs:  ECs0160 ECs2391 ECs3394 ECs4256_1
  Ype:  YPO0127_1 YPO2404 YPO2894 YPO3387
  Sty:  STM0204 STM1369 STM2541 STM3511_1
  Buc:  BU122 BU211 BU544_1
  Vch:  VC0627 VC0750 VC2720_1
  Pae:  PA0665 PA1847_1 PA3812
  Hin:  HI0376 HI0433_1 HI1723
  Pmu:  PM0320 PM0458 PM1557_1
  Xfa:  XF0405 XF2394_2 XF2562 XF2603_1
  Nme:  NMB0557 NMB1381
  NmA:  NMA0739 NMA1597
  Rso:  RSc0494 RSc1021
  Atu:  AGc3148 AGc3339
  Sme:  SMc00301 SMc02075
  Bme:  BMEI1034 BMEI1091
  Mlo:  mll5942 mlr0024 mlr1094
  Ccr:  CC1858 CC2009
  Rpr:  RP063 RP484
  Rco:  RC0093 RC0728
_______

[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases
  Aae:  aq_844
  Tma:  TM0729
  Fnu:  FN1482
  Dra:  DR1838
  Cac:  CAC2274
  Cgl:  Cgl1282 Cgl1614
  Mtu:  Rv2583c
  MtC:  MT2660
  Mle:  ML0491
  Lla:  L0213
  Spy:  SPy1981
  Spn:  SP1645
  Sau:  SA1460
  Lin:  lin0808 lin1558
  Bsu:  BS_relA
  Bha:  BH1242
  Syn:  sll1660 slr1325
  Nos:  all1549 all4671
  Eco:  relA spoT
  EcZ:  ZrelA ZspoT
  Ecs:  ECs3644 ECs4525
  Ype:  YPO0038 YPO3380
  Sty:  STM2956 STM3742
  Vch:  VC2451 VC2710
  Pae:  PA0431 PA0934 PA5338
  Hin:  HI0334 HI1741
  Pmu:  PM0920 PM1865
  Xfa:  XF0352 XF1316
  Nme:  NMB1659 NMB1735
  NmA:  NMA1917 NMA1991
  Rso:  RSc1576 RSc2153 RSc3417
  Hpy:  HP0775
  jHp:  jhp0712
  Cje:  Cj1272c
  Atu:  AGc1896
  Sme:  SMc02659
  Bme:  BMEI1296
  Mlo:  mlr7755
  Ccr:  CC1553
  Rco:  RC0374 RC0426 RC0888 RC1098 RC1099
  Bbu:  BB0198
  Uur:  UU283
  Mpn:  MPN397
  Mge:  MG278
_______

[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  Afu:  AF0089 AF0196 AF0262 AF0567 AF0568 AF0672 AF0687
        AF0840 AF1029 AF1261 AF1510 AF1772 AF1855 AF1932
        AF2033 AF2368
  Hbs:  VNG0162G VNG1073G VNG1339C
  Mac:  MA1028 MA1422 MA3717
  Mth:  MTH657
  Tac:  Ta0292 Ta0667 Ta1450
  Tvo:  TVN0126 TVN0671 TVN1309
  Pya:  PAE1379 PAE2333 PAE2466
  Sso:  SSO0369 SSO1597 SSO2510 SSO2523 SSO2808 SSO2875 SSO3064
  Ape:  APE0396 APE1310 APE2284
  Sce:  YBR041w YBR222c YOR093c
  Spo:  SPAC22F3.04 SPAC56F8.02 SPCC1827.03c
  Dra:  DR0336 DR1692 DR2507 DRA0264 DRA0309
  Cgl:  Cgl0284 Cgl0395 Cgl0445 Cgl1172 Cgl2812
  Mtu:  Rv0035 Rv0099 Rv0119 Rv0166 Rv0214 Rv0270 Rv0404
        Rv0542c Rv0551c Rv1013 Rv1058 Rv1185c Rv1193 Rv1206
        Rv1345 Rv1427c Rv1521 Rv1529 Rv1683_2 Rv1750c Rv1925
        Rv2505c Rv2930 Rv2941 Rv2948c Rv2950c Rv3089 Rv3506
        Rv3513c Rv3515c Rv3561 Rv3801c Rv3826
  MtC:  MT0040 MT0108 MT0127 MT0175 MT0224 MT0283 MT0417
        MT0567 MT0577 MT1041 MT1088 MT1222 MT1230 MT1244
        MT1387 MT1470 MT1572 MT1580 MT1723_2 MT1793 MT1976
        MT2580 MT2999 MT3011 MT3021 MT3023 MT3174 MT3610
        MT3615.2 MT3616 MT3666 MT3908 MT3934
  Mle:  ML0100 ML0132 ML0134 ML0138 ML0243 ML1051 ML1234
        ML1346_2 ML1994 ML2257 ML2358 ML2546 ML2661
  Lla:  L0172 L24742
  Spy:  SPy0526
  Sau:  SA0226 SA0533 SA1615
  Lin:  lin1780
  Bsu:  BS_lcfA BS_menE BS_pksJ BS_ydaB BS_yhfL BS_yhfT BS_yngI
  Bha:  BH1131 BH1932 BH2006 BH3103 BH3104
  Syn:  slr0492
  Nos:  alr0035 alr2678_1 alr4057
  Eco:  aas_2 caiC fadD menE ydiD
  EcZ:  Zaas_2 ZcaiC ZfadD ZmenE ZydiD
  Ecs:  ECs0040 ECs2408 ECs2514 ECs3148 ECs3693_2
  Ype:  YPO0793_2 YPO2074 YPO2523
  Sty:  STM0071 STM1350 STM1818 STM2305 STM3010_2
  Vch:  VC0249 VC1971 VC1985
  Pae:  PA1215 PA2424_1 PA2557 PA2893 PA3299 PA3300 PA3860
        PA3924 PA4198
  Hin:  HI0194 HI0390.1
  Pmu:  PM0357 PM0707
  Xfa:  XF0287 XF2276
  Nme:  NMB1276 NMB1555
  NmA:  NMA1482 NMA1743
  Rso:  RSc0064 RSc0442 RSc0780 RSc1749 RSc1806_1 RSc2857 RSp0227
        RSp0641_1 RSp0787 RSp1419_1
  Cje:  Cj0938c_3
  Atu:  AGc2614 AGc3078 AGc713 AGl123 AGl2326
  Sme:  SMa0150 SMb20650 SMc00261 SMc00592 SMc00965 SMc02162
  Bme:  BMEI1632
  Mlo:  mll5415 mll6742 mll6983 mll7824_2 mlr1843 mlr4763 mlr5451_3
        mlr6932 mlr6974 mlr7293 mlr7537
  Ccr:  CC0192 CC0391 CC0922_1 CC0944 CC0966 CC1165 CC1321
        CC1733 CC1801 CC1812 CC2299 CC2400 CC3188 CC3338
  Rpr:  RP620_3
  Rco:  RC0962_3
  Ctr:  CT776
  Cpn:  CPn0922
_______

[R] COG0319 Predicted metal-dependent hydrolase
  Aae:  aq_1354
  Tma:  TM1509
  Fnu:  FN0746
  Dra:  DR2092
  Cac:  CAC1293
  Cgl:  Cgl2235
  Mtu:  Rv2367c
  MtC:  MT2436
  Mle:  ML0628
  Lla:  L94534
  Spy:  SPy0473
  Spn:  SP0967
  Sau:  SA1399
  Lin:  lin1502
  Bsu:  BS_yqfG
  Bha:  BH1363
  Syn:  slr0053
  Nos:  all0271
  Eco:  ybeY
  EcZ:  ZybeY
  Ecs:  ECs0697
  Ype:  YPO2618
  Sty:  STM0668
  Buc:  BU442
  Vch:  VC0960
  Pae:  PA3982
  Hin:  HI0004
  Pmu:  PM1045
  Xfa:  XF0903
  Nme:  NMB0538
  NmA:  NMA0717
  Rso:  RSc0529
  Hpy:  HP1160
  jHp:  jhp1087
  Cje:  Cj0121
  Atu:  AGc626
  Sme:  SMc01113
  Bme:  BMEI1974
  Mlo:  mlr5536
  Ccr:  CC0054
  Rpr:  RP741
  Rco:  RC1142
  Ctr:  CT422
  Cpn:  CPn0509
  Tpa:  TP0650
  Bbu:  BB0060
  Uur:  UU490
  Mpu:  MYPU_3780
  Mpn:  MPN569
  Mge:  MG388
_______

[H] COG0320 Lipoate synthase
  Hbs:  VNG2216G
  Pya:  PAE2643
  Sso:  SSO3158
  Ape:  APE2344
  Sce:  YOR196c
  Spo:  SPBC8D2.15 SPBPI050
  Aae:  aq_1355
  Dra:  DR0765
  Cgl:  Cgl2160
  Mtu:  Rv2218
  MtC:  MT2275
  Mle:  ML0858
  Sau:  SA0785
  Bsu:  BS_yutB
  Bha:  BH3435
  Syn:  sll0868 slr1598
  Nos:  all1694 alr1282
  Eco:  lipA
  EcZ:  ZlipA
  Ecs:  ECs0666
  Ype:  YPO2598
  Sty:  STM0633
  Buc:  BU269
  Vch:  VC0943
  Pae:  PA3996
  Hin:  HI0026
  Pmu:  PM1930
  Xfa:  XF1269
  Nme:  NMB1216
  NmA:  NMA1378
  Rso:  RSc0322
  Atu:  AGc2646
  Sme:  SMc01037
  Bme:  BMEI0859
  Mlo:  mlr0392
  Ccr:  CC1735
  Rpr:  RP742
  Rco:  RC1145
  Ctr:  CT558
  Cpn:  CPn0832
_______

[H] COG0321 Lipoate-protein ligase B
  Pya:  PAE2651
  Sce:  YLR239c
  Spo:  SPAC4F10.05c
  Dra:  DR0764
  Cgl:  Cgl2159
  Mtu:  Rv2217
  MtC:  MT2274
  Mle:  ML0859
  Syn:  slr0994
  Nos:  alr3185
  Eco:  lipB
  EcZ:  ZlipB
  Ecs:  ECs0668
  Ype:  YPO2599
  Sty:  STM0635
  Buc:  BU268
  Vch:  VC0944
  Pae:  PA3997
  Hin:  HI0027
  Pmu:  PM1929
  Xfa:  XF1270
  Nme:  NMB1217
  NmA:  NMA1379
  Rso:  RSc0323
  Atu:  AGc2865
  Sme:  SMc01268
  Bme:  BMEII0678
  Mlo:  mlr1337
  Ccr:  CC2176
  Rpr:  RP876
  Rco:  RC1357
_______

[L] COG0322 Nuclease subunit of the excinuclease complex
  Hbs:  VNG2381G
  Mac:  MA3324
  Mth:  MTH441
  Aae:  aq_2126
  Tma:  TM0265
  Fnu:  FN1090
  Dra:  DR1354
  Cac:  CAC0508 CAC3468
  Cgl:  Cgl1554
  Mtu:  Rv1420 Rv2191_2
  MtC:  MT1463 MT2247_2
  Mle:  ML0562
  Lla:  L0258
  Spy:  SPy1068
  Spn:  SP0618
  Sau:  SA0993
  Lin:  lin0839 lin1197
  Bsu:  BS_uvrC BS_yurQ
  Bha:  BH3097
  Syn:  sll0441 sll0664 sll0865
  Nos:  alr2728
  Eco:  uvrC ydjQ
  EcZ:  Z2771 ZuvrC
  Ecs:  ECs2447 ECs2651
  Ype:  YPO1866
  Sty:  STM1309 STM1946
  Vch:  VC1214
  Pae:  PA2585
  Hin:  HI0057
  Pmu:  PM0857
  Xfa:  XF2311
  Nme:  NMB1326
  NmA:  NMA1540
  Rso:  RSc1071
  Hpy:  HP0821
  jHp:  jhp0760
  Cje:  Cj1246c
  Atu:  AGc2088
  Sme:  SMc00602
  Bme:  BMEI1251
  Mlo:  mlr7912
  Ccr:  CC2881
  Rpr:  RP572
  Rco:  RC0864
  Ctr:  CT791
  Cpn:  CPn0940
  Tpa:  TP0472
  Bbu:  BB0457
  Uur:  UU381
  Mpu:  MYPU_1560
  Mpn:  MPN125
  Mge:  MG206
_______

[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)
  Hbs:  VNG0159G
  Mac:  MA0522
  Sce:  YLR035c YMR167w YNL082w YPL164c
  Spo:  SPAC19G12.02c SPBC1703.04
  Ecu:  ECU05g0300 ECU11g1260
  Aae:  aq_1578
  Tma:  TM0022
  Fnu:  FN0462
  Dra:  DR1696
  Cac:  CAC1836
  Lla:  L0276
  Spy:  SPy2121
  Spn:  SP0173
  Sau:  SA1138
  Lin:  lin1441
  Bsu:  BS_mutL
  Bha:  BH2368
  Syn:  slr1199
  Nos:  alr3055
  Eco:  mutL
  EcZ:  ZmutL
  Ecs:  ECs5146
  Ype:  YPO0371
  Sty:  STM4359
  Buc:  BU570
  Vch:  VC0345
  Pae:  PA4946
  Hin:  HI0067
  Pmu:  PM0904
  Xfa:  XF0760
  Nme:  NMB1442
  NmA:  NMA1655
  Rso:  RSc2563
  Atu:  AGc1260
  Sme:  SMc00932
  Bme:  BMEII1026
  Mlo:  mll8278
  Ccr:  CC0695
  Rpr:  RP880
  Rco:  RC1361
  Ctr:  CT575
  Cpn:  CPn0812
  Tpa:  TP0303
  Bbu:  BB0211
_______

[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase
  Sce:  YOR274w
  Spo:  SPAC343.15
  Aae:  aq_1067
  Tma:  TM0525
  Fnu:  FN1917
  Dra:  DR1690
  Cac:  CAC1835
  Cgl:  Cgl1899
  Mtu:  Rv2727c
  MtC:  MT2799
  Mle:  ML0995
  Lla:  L15012
  Spy:  SPy0921
  Spn:  SP0671
  Sau:  SA1144
  Lin:  lin1332
  Bsu:  BS_miaA
  Bha:  BH2366
  Syn:  sll0817
  Nos:  all0220 alr5266
  Eco:  miaA
  EcZ:  ZmiaA
  Ecs:  ECs5147
  Ype:  YPO0372
  Sty:  STM4360
  Buc:  BU569
  Vch:  VC0346
  Pae:  PA4945
  Hin:  HI0068
  Pmu:  PM0905
  Xfa:  XF0090
  Nme:  NMB0935
  NmA:  NMA1130
  Rso:  RSc2564 RSp1225
  Hpy:  HP1415
  jHp:  jhp1310
  Cje:  Cj0166
  Atu:  AGc3695 AGpT290 AGpT50
  Sme:  SMc01435
  Bme:  BMEI0616
  Mlo:  mll1448
  Ccr:  CC2098
  Rpr:  RP510
  Rco:  RC0656
  Ctr:  CT766
  Cpn:  CPn0910
  Tpa:  TP0637
  Bbu:  BB0821
_______

[R] COG0325 Predicted enzyme with a TIM-barrel fold
  Mac:  MA0493
  Sce:  YBL036c
  Spo:  SPAC644.09
  Aae:  aq_274
  Tma:  TM1731
  Fnu:  FN0561
  Dra:  DR1368
  Cac:  CAC2121
  Cgl:  Cgl2103
  Mtu:  Rv2148c
  MtC:  MT2207
  Mle:  ML0919
  Lla:  L120355
  Spy:  SPy1519
  Spn:  SP1665
  Sau:  SA1031
  Lin:  lin2137
  Bsu:  BS_ylmE
  Bha:  BH2550
  Syn:  slr0556
  Nos:  alr0486
  Eco:  yggS
  EcZ:  ZyggS
  Ecs:  ECs3826
  Ype:  YPO0941
  Sty:  STM3100
  Buc:  BU549
  Vch:  VC0461
  Pae:  PA0394
  Hin:  HI0090
  Pmu:  PM0112
  Xfa:  XF1717
  Nme:  NMB0053
  NmA:  NMA0217
  Rso:  RSc2683 RSp0683
  Hpy:  HP0395
  jHp:  jhp0986
  Cje:  Cj0719c
  Atu:  AGc4983
  Sme:  SMc02812
  Bme:  BMEI0241
  Mlo:  mlr4078
  Ccr:  CC3745
_______

[O] COG0326 Molecular chaperone, HSP90 family
  Sce:  YMR186w YPL240c
  Spo:  SPAC926.04c
  Ecu:  ECU02g1100
  Fnu:  FN0321
  Cac:  CAC3315
  Cgl:  Cgl0094
  Mtu:  Rv2299c
  MtC:  MT2356
  Mle:  ML1623
  Lin:  lin0941
  Bsu:  BS_htpG
  Bha:  BH1007
  Syn:  sll0430
  Nos:  alr2323
  Eco:  htpG
  EcZ:  ZhtpG
  Ecs:  ECs0526
  Ype:  YPO3119
  Sty:  STM0487
  Buc:  BU483
  Vch:  VC0985
  Pae:  PA1068 PA1596
  Hin:  HI0104
  Pmu:  PM1024
  Xfa:  XF0978
  Rso:  RSc0990
  Hpy:  HP0210
  jHp:  jhp0196
  Cje:  Cj0518
  Sme:  SMb21183
  Mlo:  mlr2017
  Rpr:  RP840
  Rco:  RC1302
  Tpa:  TP0984
  Bbu:  BB0560
_______

[S] COG0327 Uncharacterized conserved protein
  Afu:  AF1777
  Hbs:  VNG1766C
  Mac:  MA2828
  Mth:  MTH1146
  Mja:  MJ0927
  Mka:  MK0015 MK1192
  Pho:  PH0627
  Pab:  PAB1433
  Sce:  YGL221c
  Spo:  SPCC126.12
  Ecu:  ECU07g0100
  Fnu:  FN1316
  Dra:  DR0110 DR2466
  Cac:  CAC1303
  Cgl:  Cgl2188_1 Cgl2188_3
  Mtu:  Rv2230c_1 Rv2230c_3
  Mle:  ML1639_1 ML1639_3
  Lla:  L84937
  Spy:  SPy0931
  Spn:  SP1609
  Sau:  SA1388_1 SA1388_3
  Lin:  lin1489_1 lin1489_3
  Bsu:  BS_yqfO_1 BS_yqfO_3
  Bha:  BH1380_1 BH1380_3
  Nos:  alr3216
  Eco:  ybgI
  EcZ:  ZybgI
  Ecs:  ECs0735
  Ype:  YPO2697
  Sty:  STM0711
  Buc:  BU301
  Vch:  VC2093
  Pae:  PA4445
  Hin:  HI0105
  Pmu:  PM0183
  Nme:  NMB2054
  NmA:  NMA0382
  Rso:  RSc2931
  Hpy:  HP0959
  jHp:  jhp0893
  Cje:  Cj0705
  Ctr:  CT108
  Cpn:  CPn0137
  Tpa:  TP0977
  Bbu:  BB0468
  Uur:  UU351
  Mpu:  MYPU_4560
_______

[L] COG0328 Ribonuclease HI
  Hbs:  VNG0255C
  Pya:  PAE1792
  Sce:  YMR234w_2
  Spo:  SPBC336.06c_2
  Dra:  DR0899
  Cgl:  Cgl0326 Cgl2186_1
  Mtu:  Rv2228c_1
  MtC:  MT2287_1
  Mle:  ML1637_1
  Sau:  SA1266
  Lin:  lin1993
  Bsu:  BS_ypdQ
  Bha:  BH1770
  Syn:  sll0980_1 slr0080
  Nos:  alr0142_1
  Eco:  rnhA
  EcZ:  ZrnhA
  Ecs:  ECs0210
  Ype:  YPO1081
  Sty:  STM0263
  Vch:  VC0498 VC2234
  Pae:  PA1815
  Hin:  HI0138
  Pmu:  PM0107
  Xfa:  XF2158
  Nme:  NMB1618
  NmA:  NMA1817
  Rso:  RSc1513
  Hpy:  HP0661
  jHp:  jhp0606
  Cje:  Cj1636c
  Atu:  AGc1417 AGl3264
  Sme:  SMc00018 SMc02327
  Bme:  BMEI1457
  Mlo:  mlr7504
  Ccr:  CC3365
  Rpr:  RP726
  Rco:  RC1108
  Tpa:  TP0353
_______

[EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase
  Afu:  AF0910
  Hbs:  VNG0444G
  Mac:  MA4473
  Mth:  MTH801
  Mja:  MJ0244
  Mka:  MK1607
  Tac:  Ta0619 Ta0745 Ta1157
  Tvo:  TVN0669 TVN1228
  Pho:  PH0847
  Pab:  PAB0832
  Pya:  PAE2915
  Sso:  SSO2274 SSO3035 SSO3072 SSO3197
  Ape:  APE1023
  Aae:  aq_1143
  Tma:  TM1521
  Fnu:  FN1475
  Cac:  CAC2378 CAC3600
  Cgl:  Cgl0448 Cgl1925 Cgl2594
  Mtu:  Rv2753c
  MtC:  MT2823
  Mle:  ML1513
  Lla:  L0093
  Spy:  SPy0257
  Spn:  SP1014 SP1329 SP1676
  Sau:  SA0304 SA1227
  Lin:  lin1474
  Bsu:  BS_dapA BS_ycbC
  Bha:  BH1742 BH2399
  Syn:  slr0550
  Nos:  all3679
  Eco:  dapA nanA yagE yjhH
  EcZ:  ZdapA ZnanA
  Ecs:  ECs3340 ECs4098
  Ype:  YPO3024 YPO3062
  Sty:  STM2489 STM3339 STM3532
  Buc:  BU096
  Vch:  VC1776 VC2157
  Pae:  PA0223 PA1010 PA1254 PA4188
  Hin:  HI0142 HI0255
  Pmu:  PM1051 PM1715
  Xfa:  XF0963
  Nme:  NMB0929
  NmA:  NMA1124
  Rso:  RSc0665 RSc1145 RSc2111 RSp0826
  Hpy:  HP1013
  jHp:  jhp0410
  Cje:  Cj0481 Cj0806
  Atu:  AGc1641 AGc1883 AGc4548 AGl1337 AGl1788 AGl3338 AGl411
        AGpA569 AGpA576 AGpA671 AGpA90
  Sme:  SMa0707 SMa1440 SMb20107 SMb20140 SMb20259 SMb20298 SMb20299
        SMb21508 SMc02404 SMc03259
  Bme:  BMEI1301 BMEII0862 BMEII1006
  Mlo:  mll1010 mll3981 mll6376 mll6811 mlr6292 mlr7746
  Ccr:  CC1195
  Rpr:  RP429
  Rco:  RC0595
  Ctr:  CT361
  Cpn:  CPn1050
_______

[O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs
  Afu:  AF1420
  Hbs:  VNG0321G VNG6208C
  Mac:  MA0916
  Mth:  MTH1780 MTH692
  Mja:  MJ0827
  Mka:  MK0847
  Tac:  Ta1301
  Tvo:  TVN0316
  Pho:  PH0470 PH1511
  Pab:  PAB1324 PAB1933
  Pya:  PAE0262 PAE0750
  Sso:  SSO1960 SSO2195
  Ape:  APE2153
  Sce:  YGR132c YGR231c
  Spo:  SPAC1782.06c SPBC16G5.07c SPCC1322.16
  Aae:  aq_911
  Tma:  TM0866 TM1822 TM1823
  Fnu:  FN1549
  Dra:  DR0482 DR2143
  Cac:  CAC1052 CAC3381
  Cgl:  Cgl1496 Cgl2775 Cgl3007
  Mtu:  Rv1488 Rv3090
  MtC:  MT1533.2 MT3175
  Mle:  ML1802
  Lla:  L16806
  Spy:  SPy1884
  Spn:  SP2132 SP2156
  Bha:  BH3154 BH3155
  Syn:  sll0815 slr1106 slr1128 slr1768
  Nos:  all4387 alr0740 alr1295 alr2472
  Eco:  hflC hflK ybbK
  EcZ:  ZhflC ZhflK ZybbK
  Ecs:  ECs0552 ECs5150 ECs5151
  Ype:  YPMT1.49c YPO0375 YPO0376 YPO1342 YPO3083
  Sty:  STM0501 STM4363 STM4364
  Buc:  BU567 BU568
  Vch:  VC0349 VC0350 VC0976
  Pae:  PA0452 PA2437 PA2438 PA2439 PA4582 PA4941 PA4942
  Hin:  HI0150 HI0151
  Pmu:  PM0117 PM0118 PM0889
  Xfa:  XF0185 XF0452 XF0453
  Nme:  NMB1220
  NmA:  NMA1382
  Rso:  RSc0145 RSc0802 RSc1222 RSc1223 RSc1423
  Hpy:  HP0248
  jHp:  jhp0233
  Cje:  Cj0268c
  Atu:  AGc3704 AGc3705 AGl2127
  Sme:  SMb20989 SMc01440 SMc01441 SMc04020
  Bme:  BMEI0610 BMEI0611 BMEII0019
  Mlo:  mll1454 mll1455 mll1932 mlr1172 mlr3021
  Ccr:  CC2536 CC3375
  Rpr:  RP122 RP123 RP328
  Rco:  RC0164 RC0165 RC0452
  Tpa:  TP0113 TP0114
  Bbu:  BB0203 BB0204
  Mpu:  MYPU_0680
_______

[I] COG0331 (acyl-carrier-protein) S-malonyltransferase
  Sce:  YKL182w_1 YKL182w_4 YOR221c YPL231w_1
  Spo:  SPAC11G7.05c SPAC4A8.11c_1 SPAC926.09c_1 SPAC926.09c_4
  Aae:  aq_892
  Tma:  TM0798
  Fnu:  FN0149
  Dra:  DR1945
  Cac:  CAC2019 CAC3575
  Cgl:  Cgl0813_1 Cgl0813_4 Cgl2444_1 Cgl2444_4
  Mtu:  Rv2243 Rv2524c_1 Rv2524c_4
  MtC:  MT2303 MT2600_1 MT2600_4
  Mle:  ML1191_1 ML1191_4 ML1653
  Lla:  L0184
  Spy:  SPy1750
  Spn:  SP0420
  Sau:  SA1073
  Lin:  lin1922
  Bsu:  BS_fabD BS_pksC BS_pksE_1
  Bha:  BH2492
  Syn:  slr2023
  Nos:  alr0240
  Eco:  fabD
  EcZ:  ZfabD
  Ecs:  ECs1470
  Ype:  YPO1463 YPO1598
  Sty:  STM1194
  Vch:  VC2022
  Pae:  PA0214 PA2968
  Hin:  HI0156
  Pmu:  PM1915
  Xfa:  XF0670
  Nme:  NMB1918
  NmA:  NMA0536
  Rso:  RSc1051
  Hpy:  HP0090
  jHp:  jhp0083
  Cje:  Cj0116
  Atu:  AGc2025
  Sme:  SMc00571
  Bme:  BMEI1478
  Mlo:  mlr7849
  Ccr:  CC1674
  Rpr:  RP735
  Rco:  RC1116
  Ctr:  CT238
  Cpn:  CPn0297
_______

[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III
  Aae:  aq_1099
  Fnu:  FN0148 FN1850
  Dra:  DR1946 DR1947
  Cac:  CAC0814 CAC2011 CAC3578
  Mtu:  Rv0533c
  MtC:  MT0557
  Lla:  L0182
  Spy:  SPy1754
  Spn:  SP0417
  Sau:  SA0842
  Lin:  lin2305
  Bsu:  BS_yhfB BS_yjaX
  Bha:  BH0764 BH1844 BH2883
  Syn:  slr1511
  Nos:  alr0239
  Eco:  fabH
  EcZ:  ZfabH
  Ecs:  ECs1469
  Ype:  YPO1597
  Sty:  STM1193
  Vch:  VC2023 VCA0751
  Pae:  PA0997 PA0998 PA0999 PA3286 PA3333
  Hin:  HI0157
  Pmu:  PM1914
  Xfa:  XF1817 XF1970
  Nme:  NMB1916
  NmA:  NMA0538
  Rso:  RSc1050 RSp0194 RSp0786
  Hpy:  HP0202
  jHp:  jhp0188
  Cje:  Cj0328c Cj1303
  Atu:  AGc2178 AGl1702
  Sme:  SMc01785
  Bme:  BMEI1180 BMEII0779
  Mlo:  mll1602 mll5827 mll9094 mlr8424
  Ccr:  CC0865 CC1369 CC1442
  Rpr:  RP772
  Rco:  RC1202
  Ctr:  CT239
  Cpn:  CPn0298
_______

[J] COG0333 Ribosomal protein L32
  Sce:  YCR003w
  Spo:  SPBC1604.13c
  Aae:  aq_1102
  Tma:  TM0150
  Fnu:  FN1364
  Dra:  DR2366
  Cac:  CAC1745
  Lla:  L00096
  Spy:  SPy2159
  Spn:  SP2134
  Sau:  SAS033
  Lin:  lin0489 lin2153
  Bsu:  BS_rpmF
  Bha:  BH2583
  Syn:  ssr1736
  Nos:  asl3674
  Eco:  rpmF
  EcZ:  ZrpmF
  Ecs:  ECs1467
  Ype:  YPO1595
  Sty:  STM1191
  Buc:  BU349
  Vch:  VC2025
  Pae:  PA2970
  Hin:  HI0158
  Pmu:  PM1912
  Xfa:  XF1816
  Nme:  NMB1911
  NmA:  NMA0544
  Rso:  RSc1048
  Hpy:  HP0200
  jHp:  jhp0186
  Cje:  Cj0330c
  Atu:  AGc173
  Sme:  SMc03881
  Bme:  BMEI0272
  Mlo:  msl3782
  Ccr:  CC1721
  Rpr:  RP773
  Rco:  RC1203
  Ctr:  CT810
  Cpn:  CPn0961
  Tpa:  TP0807
  Bbu:  BB0703
  Uur:  UU333
  Mpu:  MYPU_3240
  Mpn:  MPN540
  Mge:  MG363
_______

[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase
  Afu:  AF0922
  Hbs:  VNG0161G VNG0628G VNG1204G
  Mac:  MA3169
  Tac:  Ta0635 Ta0776
  Tvo:  TVN0759 TVN0760
  Pho:  PH1593
  Pab:  PAB0391
  Pya:  PAE1996 PAE3438
  Sso:  SSO1457 SSO1907 SSO1930 SSO2044
  Ape:  APE1386
  Sce:  YAL062w YOR375c
  Spo:  SPCC622.12c
  Tma:  TM1015
  Fnu:  FN0488
  Dra:  DR0158 DR0980 DR1718
  Cac:  CAC0737
  Cgl:  Cgl2027
  Spn:  SP1306
  Sau:  SA0819
  Lin:  lin0569
  Bsu:  BS_ypcA BS_yqiT BS_yweB
  Bha:  BH0218 BH0824 BH1622 BH2101 BH2718 BH2765 BH3942
  Syn:  slr0710
  Nos:  all0426 alr4255
  Eco:  gdhA
  EcZ:  ZgdhA
  Ecs:  ECs2467
  Ype:  YPO3971
  Sty:  STM1299 STM1795
  Pae:  PA3418 PA4588
  Hin:  HI0189
  Pmu:  PM0043
  Nme:  NMB1476 NMB1710
  NmA:  NMA1687 NMA1964
  Rso:  RSc0480
  Hpy:  HP0380
  jHp:  jhp1001
  Sme:  SMa0228
  Bme:  BMEI1723
  Ccr:  CC2082
  Ctr:  CT773
  Cpn:  CPn0919
_______

[J] COG0335 Ribosomal protein L19
  Sce:  YCR046c
  Spo:  SPAC343.02
  Aae:  aq_1954
  Tma:  TM1571
  Fnu:  FN0430
  Dra:  DR0755
  Cac:  CAC1759
  Cgl:  Cgl1989
  Mtu:  Rv2904c
  MtC:  MT2972
  Mle:  ML1613
  Lla:  L0415
  Spy:  SPy0724
  Spn:  SP1293
  Sau:  SA1084
  Lin:  lin1901
  Bsu:  BS_rplS
  Bha:  BH2478
  Syn:  sll1740
  Nos:  alr5297
  Eco:  rplS
  EcZ:  ZrplS
  Ecs:  ECs3469
  Ype:  YPO3292
  Sty:  STM2673
  Buc:  BU397
  Vch:  VC0564
  Pae:  PA3742
  Hin:  HI0201
  Pmu:  PM1298
  Xfa:  XF0110
  Nme:  NMB0589
  NmA:  NMA0792
  Rso:  RSc0936
  Hpy:  HP1147
  jHp:  jhp1074
  Cje:  Cj0714
  Atu:  AGc4900
  Sme:  SMc03863
  Bme:  BMEI0156
  Mlo:  mll4283
  Ccr:  CC0197
  Rpr:  RP112
  Rco:  RC0152
  Ctr:  CT028
  Cpn:  CPn0118
  Tpa:  TP0909
  Bbu:  BB0699
  Uur:  UU566
  Mpu:  MYPU_4670
  Mpn:  MPN658
  Mge:  MG444
_______

[J] COG0336 tRNA-(guanine-N1)-methyltransferase
  Aae:  aq_1489
  Tma:  TM1569
  Fnu:  FN0283
  Dra:  DR2011
  Cac:  CAC1758
  Cgl:  Cgl2001
  Mtu:  Rv2906c
  MtC:  MT2974
  Mle:  ML1615
  Lla:  L6128
  Spy:  SPy0849
  Spn:  SP0779
  Sau:  SA1083
  Lin:  lin1906
  Bsu:  BS_trmD
  Bha:  BH2479
  Syn:  sll1198
  Nos:  alr3882
  Eco:  trmD
  EcZ:  ZtrmD
  Ecs:  ECs3470
  Ype:  YPO3293
  Sty:  STM2674
  Buc:  BU396
  Vch:  VC0563
  Pae:  PA3743
  Hin:  HI0202
  Pmu:  PM1297
  Xfa:  XF0109
  Nme:  NMB0590
  NmA:  NMA0793
  Rso:  RSc0935
  Hpy:  HP1148
  jHp:  jhp1075
  Cje:  Cj0713
  Atu:  AGc4898
  Sme:  SMc03861
  Bme:  BMEI0149
  Mlo:  mll4287
  Ccr:  CC0198
  Rpr:  RP111
  Rco:  RC0151
  Ctr:  CT027_1
  Cpn:  CPn0117_1
  Tpa:  TP0908
  Bbu:  BB0698
  Uur:  UU567
  Mpu:  MYPU_4680
  Mpn:  MPN659
  Mge:  MG445
_______

[E] COG0337 3-dehydroquinate synthetase
  Tac:  Ta0285
  Tvo:  TVN1316
  Pab:  PAB0298
  Pya:  PAE1926
  Sso:  SSO0305
  Ape:  APE0579
  Sce:  YDR127w_1
  Spo:  SPAC1834.02_1
  Tma:  TM0348_2
  Fnu:  FN0871_1
  Dra:  DR0777
  Cac:  CAC0894
  Cgl:  Cgl1583
  Mtu:  Rv2538c
  MtC:  MT2613
  Mle:  ML0518
  Lla:  L0060
  Spy:  SPy1577
  Spn:  SP1375
  Sau:  SA1298
  Lin:  lin2041
  Bsu:  BS_aroB
  Bha:  BH1657
  Syn:  slr2130
  Nos:  all0417 alr1924
  Eco:  aroB
  EcZ:  ZaroB
  Ecs:  ECs4231
  Ype:  YPO0152
  Sty:  STM3486
  Buc:  BU538
  Vch:  VC2628
  Pae:  PA5038
  Hin:  HI0208
  Pmu:  PM1223
  Xfa:  XF1334
  Nme:  NMB1814
  NmA:  NMA0647
  Rso:  RSc2969
  Hpy:  HP0283
  jHp:  jhp0268
  Cje:  Cj1008c
  Atu:  AGl2401
  Sme:  SMc00696
  Bme:  BMEI0043
  Mlo:  mll3571
  Ccr:  CC3009
  Ctr:  CT369
  Cpn:  CPn1036
_______

[L] COG0338 Site-specific DNA methylase
  Mja:  MJ0598
  Tac:  Ta0644m
  Tvo:  TVN0849
  Pho:  PH1032
  Fnu:  FN1923_2
  Cac:  CAC3358
  Lin:  lin0088
  Bha:  BH4003
  Syn:  sll0729 slr1803
  Nos:  all0061 alr1152
  Eco:  dam
  EcZ:  Zdam
  Ecs:  ECs4229
  Ype:  YPO0154 YPO2088
  Sty:  STM2730 STM3484
  Vch:  VC2626
  Hin:  HI0209
  Pmu:  PM1222
  Xfa:  XF0935 XF1804
  Nme:  NMB1895
  Hpy:  HP0481
  jHp:  jhp0433
  Rco:  RC0690
  Tpa:  TP0810
_______

[E] COG0339 Zn-dependent oligopeptidases
  Sce:  YCL057w YKL134c
  Spo:  SPAC1F3.10c
  Dra:  DR1659
  Cgl:  Cgl2248
  Syn:  slr0659
  Nos:  alr0880
  Eco:  dcp prlC
  EcZ:  Zdcp ZprlC
  Ecs:  ECs2147 ECs4370
  Ype:  YPO3975
  Sty:  STM1512 STM3594
  Vch:  VC0188
  Pae:  PA0067
  Hin:  HI0214
  Pmu:  PM0680
  Xfa:  XF0127 XF1944
  Nme:  NMB0214
  NmA:  NMA0054
  Rso:  RSc1595
  Atu:  AGc4829
  Sme:  SMc04403
  Bme:  BMEII0416
  Mlo:  mlr4139
  Ccr:  CC3702
_______

[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase
  Afu:  AF0074_2
  Hbs:  VNG0664G VNG1534a_2
  Mac:  MA0676_2
  Mth:  MTH1916
  Mja:  MJ1619
  Pho:  PH0147
  Pab:  PAB0096 PAB0104_2
  Sso:  SSO0662
  Sce:  YDL141w_2
  Spo:  SPBC30D10.07c_2
  Aae:  aq_566
  Tma:  TM0224
  Fnu:  FN1921
  Dra:  DR2341_3
  Cac:  CAC0212_2 CAC0589
  Cgl:  Cgl0689
  Mtu:  Rv3279c
  MtC:  MT3379
  Mle:  ML0732
  Lla:  L0191_2 L0192
  Spy:  SPy1362_2
  Spn:  SP1900_2
  Sau:  SA1289_2
  Lin:  lin2018_2
  Bsu:  BS_birA_2
  Bha:  BH1685_2
  Syn:  sll1655
  Nos:  alr5256
  Eco:  birA_2
  EcZ:  ZbirA_2
  Ecs:  ECs4900_2
  Ype:  YPO3759_2
  Sty:  STM4138_2
  Vch:  VC0319_2
  Pae:  PA4280_2
  Hin:  HI0220.1_2
  Pmu:  PM0296_2
  Xfa:  XF1796_2
  Nme:  NMB2075_1
  NmA:  NMA0357_1
  Rso:  RSc0312
  Hpy:  HP1140
  jHp:  jhp1068
  Cje:  Cj0099
  Atu:  AGc2366
  Sme:  SMc01928
  Bme:  BMEI1144
  Mlo:  mll1351
  Ccr:  CC1936
  Rpr:  RP533
  Rco:  RC0773
  Ctr:  CT725
  Cpn:  CPn0866
  Tpa:  TP0357
_______

[U] COG0341 Preprotein translocase subunit SecF
  Hbs:  VNG1988G
  Mac:  MA0138
  Mth:  MTH848
  Mja:  MJ1253
  Mka:  MK1008
  Pho:  PH1986
  Pab:  PAB1176
  Aae:  aq_1602
  Tma:  TM0861
  Fnu:  FN0700
  Dra:  DR1822_2
  Cac:  CAC2277
  Cgl:  Cgl1617
  Mtu:  Rv2586c
  MtC:  MT2663
  Mle:  ML0488
  Sau:  SA1463_2
  Lin:  lin1562_2
  Bsu:  BS_secDF_2
  Bha:  BH1237
  Syn:  slr0775
  Nos:  all0120
  Eco:  secF
  EcZ:  ZsecF
  Ecs:  ECs0460
  Ype:  YPO3188
  Sty:  STM0408
  Vch:  VC0744
  Pae:  PA3820
  Hin:  HI0239
  Pmu:  PM0226
  Xfa:  XF0226
  Nme:  NMB0608
  NmA:  NMA0813
  Rso:  RSc2716
  Hpy:  HP1549
  jHp:  jhp1450
  Cje:  Cj1092c
  Atu:  AGc2877_2
  Sme:  SMc02057_2 SMc02265_2
  Bme:  BMEI0680_2 BMEI1076_2
  Mlo:  mll1070_2
  Ccr:  CC1990
  Rpr:  RP114
  Rco:  RC0154
  Ctr:  CT448_3
  Cpn:  CPn0564_3
  Tpa:  TP0411
  Bbu:  BB0653
  Mpu:  MYPU_6590_2
_______

[U] COG0342 Preprotein translocase subunit SecD
  Hbs:  VNG1987G
  Mac:  MA0139
  Mth:  MTH849
  Mja:  MJ0111
  Mka:  MK1009
  Pho:  PH1985
  Pab:  PAB1177
  Aae:  aq_973
  Tma:  TM0860
  Fnu:  FN0699
  Dra:  DR1822_1
  Cac:  CAC2278
  Cgl:  Cgl1618
  Mtu:  Rv2587c
  MtC:  MT2664
  Mle:  ML0487
  Sau:  SA1463_1
  Lin:  lin1562_1
  Bsu:  BS_secDF_1
  Bha:  BH1236
  Syn:  slr0774
  Nos:  all0121
  Eco:  secD
  EcZ:  ZsecD
  Ecs:  ECs0459
  Ype:  YPO3189
  Sty:  STM0407
  Vch:  VC0743 VCA0693
  Pae:  PA3821 PA4718
  Hin:  HI0240
  Pmu:  PM0227
  Xfa:  XF0225
  Nme:  NMB0607
  NmA:  NMA0812
  Rso:  RSc2715
  Hpy:  HP1550
  jHp:  jhp1449
  Cje:  Cj1093c
  Atu:  AGc2877_1
  Sme:  SMc02057_1 SMc02265_1
  Bme:  BMEI0680_1 BMEI1076_1
  Mlo:  mll1070_1 mlr0156
  Ccr:  CC1991
  Rpr:  RP586
  Rco:  RC0894
  Ctr:  CT448_2
  Cpn:  CPn0564_2
  Tpa:  TP0410
  Bbu:  BB0652
  Mpu:  MYPU_6590_1
_______

[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase
  Afu:  AF0588 AF1485
  Hbs:  VNG1959G
  Mac:  MA4419
  Mth:  MTH176_1 MTH1877
  Mja:  MJ0436_1
  Mka:  MK0188
  Tac:  Ta1493_1
  Tvo:  TVN1497_1
  Pho:  PH1116_1
  Pab:  PAB0740_1
  Pya:  PAE0777
  Sso:  SSO0274
  Ape:  APE2017
  Spo:  SPAC1687.19c SPAC2F3.13c_1
  Ecu:  ECU06g0310
  Aae:  aq_1308
  Tma:  TM1561
  Fnu:  FN1481
  Dra:  DR2578
  Cac:  CAC2282
  Cgl:  Cgl0233
  Lla:  L0361
  Spy:  SPy0203
  Spn:  SP2058
  Sau:  SA1465
  Lin:  lin1565
  Bsu:  BS_tgt
  Bha:  BH1228
  Syn:  slr0713
  Nos:  alr1885
  Eco:  tgt
  EcZ:  Ztgt
  Ecs:  ECs0457
  Ype:  YPO3191
  Sty:  STM0405
  Buc:  BU133
  Vch:  VC0741
  Pae:  PA3823
  Hin:  HI0244
  Pmu:  PM0229
  Xfa:  XF0223
  Nme:  NMB0719
  NmA:  NMA0928
  Rso:  RSc2713
  Hpy:  HP0281
  jHp:  jhp0266
  Cje:  Cj1010
  Atu:  AGc3085
  Sme:  SMc01206
  Bme:  BMEI0890 BMEI1003
  Mlo:  mll0721
  Ccr:  CC1588
  Rpr:  RP721
  Rco:  RC1097
  Ctr:  CT193
  Cpn:  CPn0219
  Bbu:  BB0809
_______

[S] COG0344 Predicted membrane protein
  Aae:  aq_676
  Tma:  TM1283 TM1447
  Fnu:  FN0537
  Dra:  DR0790_1 DR2021 DR2270
  Cac:  CAC2500
  Lla:  L5517
  Spy:  SPy0908
  Spn:  SP0851
  Sau:  SA1187
  Lin:  lin1323
  Bsu:  BS_yneS
  Bha:  BH1639
  Syn:  sll1973
  Nos:  all0492
  Eco:  ygiH
  EcZ:  ZygiH
  Ecs:  ECs3942
  Ype:  YPO0647
  Sty:  STM3207
  Vch:  VC0523
  Pae:  PA0581
  Hin:  HI0266
  Pmu:  PM1696
  Nme:  NMB1062
  NmA:  NMA1261
  Rso:  RSc2546
  Hpy:  HP1509
  jHp:  jhp1402
  Cje:  Cj0357c
  Atu:  AGc2402
  Sme:  SMc01362
  Bme:  BMEII0668
  Mlo:  mlr0688
  Ccr:  CC2446
  Uur:  UU405
  Mpu:  MYPU_2950
  Mpn:  MPN350
  Mge:  MG247
_______

[E] COG0345 Pyrroline-5-carboxylate reductase
  Mac:  MA4102
  Mth:  MTH897
  Tac:  Ta0139
  Tvo:  TVN1139
  Pya:  PAE1917
  Sso:  SSO0495
  Ape:  APE0146
  Sce:  YER023w
  Spo:  SPAPYUG7.05
  Aae:  aq_166
  Tma:  TM0578
  Dra:  DR1522
  Cac:  CAC3252
  Cgl:  Cgl0406
  Mtu:  Rv0500
  MtC:  MT0520
  Mle:  ML2430
  Lla:  L135991
  Spy:  SPy0112
  Spn:  SP0933
  Sau:  SA1334
  Lin:  lin0414 lin1424
  Bsu:  BS_comER BS_proH BS_ykeA BS_yqjO
  Bha:  BH0887 BH1331 BH1503
  Syn:  slr0661
  Nos:  alr0488
  Eco:  proC
  EcZ:  ZproC
  Ecs:  ECs0437
  Ype:  YPO0942
  Sty:  STM0386
  Vch:  VC0460
  Pae:  PA0393
  Hin:  HI0307
  Pmu:  PM0095
  Xfa:  XF2712
  Nme:  NMB0055
  NmA:  NMA0215
  Rso:  RSc2684
  Hpy:  HP1158
  jHp:  jhp1085
  Cje:  Cj1076
  Atu:  AGc4015 AGl1737
  Sme:  SMb20003 SMc02677
  Bme:  BMEII0509
  Mlo:  mll6498
  Ccr:  CC0494
  Tpa:  TP0797
_______

[E] COG0346 Lactoylglutathione lyase and related lyases
  Afu:  AF1476 AF2218
  Hbs:  VNG0478C VNG0595H VNG1114G
  Mac:  MA0108 MA1994
  Mth:  MTH758
  Pho:  PH0272
  Pab:  PAB2438
  Sso:  SSO1223 SSO2054 SSO2426
  Ape:  APE0688
  Sce:  YML004c
  Spo:  SPBC12C2.12c
  Fnu:  FN0356 FN0974 FN1050
  Dra:  DR0109 DR0670 DR1341 DR1695 DR2022 DR2104 DR2208
        DRA0224
  Cac:  CAC0249 CAC0547 CAC2192 CAC2466 CAC2469
  Cgl:  Cgl0108 Cgl0701 Cgl1189
  Mtu:  Rv0274 Rv0546c Rv2641 Rv3568c
  MtC:  MT0286.1 MT0571 MT1364 MT2719 MT3673
  Mle:  ML1157 ML2261
  Lla:  L133932 L177700 L80191
  Spy:  SPy0511 SPy1155
  Spn:  SP0731 SP0962
  Sau:  SA0032 SA0326 SA1243 SA1340 SA2124 SA2307
  Lin:  lin0292 lin0429 lin0752 lin0753 lin1810 lin1982 lin2271
        lin2347
  Bsu:  BS_ydfO BS_yetH BS_ykcA BS_yndN BS_yodE BS_yqcK BS_yqjC
        BS_yqjT BS_yraH BS_ysfE BS_yurT BS_ywbC BS_ywkD BS_yyaH
  Bha:  BH0282 BH0477 BH1468 BH1778 BH2160 BH2175 BH2212
        BH3219 BH3220 BH3221 BH3222 BH3872 BH3932
  Syn:  sll1658 sll1675 slr0381
  Nos:  all0746 all2221_1 all2931 all3014 all7236 all8503 alr1104
        alr2074 alr2321 alr2922 alr4469
  Eco:  gloA yaeR
  EcZ:  ZgloA ZyaeR
  Ecs:  ECs0189 ECs2360
  Ype:  YPO1061 YPO2381
  Sty:  STM0235 STM1435 STM3117
  Vch:  VC1010 VCA0328 VCA0341 VCA0347 VCA0401 VCA0432 VCA0463
        VCA0476 VCA0506 VCA0619 VCA0890
  Pae:  PA0710 PA0880 PA1129 PA2024 PA2546 PA3127_1 PA3389
        PA3503 PA3524 PA3956 PA4183 PA4518 PA5111
  Hin:  HI0323
  Pmu:  PM0014 PM0987
  Xfa:  XF1399 XF2305
  Nme:  NMB0340
  NmA:  NMA0607 NMA2147
  Rso:  RSc0520 RSc0640 RSp0693 RSp0888 RSp1230 RSp1249
  Cje:  Cj1301
  Atu:  AGc1212 AGc1390 AGc1587 AGc1928_1 AGc2827 AGc3314 AGc3434
        AGc3564 AGc4259 AGc4455 AGc4460 AGc609 AGl1189 AGl1752
        AGl2500 AGpA811
  Sme:  SMa0374 SMa0723 SMa1358 SMa1431 SMa1767 SMa2267 SMb20217
        SMb21013 SMb21154 SMb21202 SMc00106 SMc00290 SMc00812 SMc01122
        SMc01145 SMc01550 SMc01667 SMc01930 SMc01956_1 SMc01961 SMc01989
        SMc02845 SMc02901 SMc04435
  Bme:  BMEI0164 BMEI0730 BMEI1142 BMEI1773 BMEI1774 BMEI1888 BMEII0064
        BMEII0136 BMEII0295 BMEII0335 BMEII0415 BMEII0689
  Mlo:  mll0128 mll0167 mll1346 mll1814 mll2252 mll2418 mll3207
        mll3683 mll3732 mll3737 mll3759 mll4401 mll5167 mll5401
        mll5435 mll8574 mlr0173 mlr1105 mlr1780 mlr2034 mlr2185
        mlr3345 mlr4624 mlr5077 mlr7086 mlr7758 mlr7800 mlr7891
        mlr8462
  Ccr:  CC0113 CC0158 CC0298 CC0687 CC1315 CC1933 CC2022
        CC2142 CC2526 CC2785 CC2894 CC2962 CC3096
_______

[E] COG0347 Nitrogen regulatory protein PII
  Afu:  AF0978 AF1747 AF1750
  Mac:  MA1211 MA1212 MA1214 MA1215 MA3896 MA3897 MA3916
        MA4208
  Mth:  MTH1561 MTH1562 MTH662 MTH664
  Mja:  MJ0059 MJ1344
  Mka:  MK0054 MK1087
  Aae:  aq_109 aq_213 aq_862
  Tma:  TM0403
  Dra:  DR0692
  Cac:  CAC0254 CAC0255 CAC0681
  Cgl:  Cgl2011
  Mtu:  Rv2919c
  MtC:  MT2987
  Lla:  L0235
  Lin:  lin1552
  Bsu:  BS_nrgB
  Syn:  ssl0707
  Nos:  all2319 alr0987
  Eco:  glnB glnK
  EcZ:  ZglnB ZglnK
  Ecs:  ECs0504 ECs3419
  Ype:  YPO2911 YPO3143
  Sty:  STM0462 STM2561
  Vch:  VC0606 VC2239
  Pae:  PA5288
  Hin:  HI0337
  Pmu:  PM2004
  Xfa:  XF1843
  Nme:  NMB1995
  NmA:  NMA0447
  Rso:  RSc0342 RSc2345 RSp0531
  Atu:  AGc3252 AGc4999
  Sme:  SMc00947 SMc03806
  Bme:  BMEI0978
  Mlo:  mll0345 mll4247
  Ccr:  CC0521 CC1339 CC1968
_______

[C] COG0348 Polyferredoxin
  Afu:  AF0143
  Mac:  MA4409
  Mja:  MJ0749 MJ0750
  Mka:  MK1183
  Tac:  Ta1233
  Tvo:  TVN0362_2
  Sso:  SSO1581_2 SSO1816 SSO2764_2
  Cac:  CAC2762_1
  Syn:  slr1529_3
  Nos:  all3558_3
  Eco:  napH yccM
  EcZ:  ZnapH ZyccM
  Ecs:  ECs1147 ECs3093
  Sty:  STM2257
  Vch:  VC0036
  Pae:  PA1551 PA3391_2 PA4131
  Hin:  HI0346
  Pmu:  PM1596
  Nme:  NMB1454
  NmA:  NMA1668
  Rso:  RSc1280 RSp1369_2
  Hpy:  HP1508
  jHp:  jhp1401
  Cje:  Cj0369c Cj0782
  Atu:  AGc2821
  Sme:  SMa1179_2 SMa1211
  Bme:  BMEI1567 BMEII0882 BMEII0975_2
  Mlo:  mll6626 mlr6415
  Ccr:  CC1405
_______

[J] COG0349 Ribonuclease D
  Sce:  YOR001w_2
  Cac:  CAC1909
  Cgl:  Cgl1855
  Mtu:  Rv2681
  MtC:  MT2755
  Mle:  ML1040
  Syn:  sll0320
  Nos:  all1697 all3791
  Eco:  rnd
  EcZ:  Zrnd
  Ecs:  ECs2513
  Ype:  YPO2075
  Sty:  STM1817
  Vch:  VC1984
  Pae:  PA1294
  Hin:  HI0390
  Pmu:  PM0706
  Xfa:  XF0751
  Atu:  AGc2134 AGl1490
  Sme:  SMc00342 SMc00622
  Bme:  BMEI1203 BMEI1828
  Mlo:  mll3296 mll8354
  Ccr:  CC1704 CC3603
  Rpr:  RP422 RP462
  Rco:  RC0587 RC0696
_______

[L] COG0350 Methylated DNA-protein cysteine methyltransferase
  Afu:  AF2314
  Hbs:  VNG0306C
  Mac:  MA4322
  Mth:  MTH618
  Mja:  MJ1529
  Mka:  MK0130
  Tac:  Ta0460_1
  Tvo:  TVN0781_1
  Pho:  PH1835
  Pab:  PAB0260
  Pya:  PAE2012
  Sso:  SSO2487
  Ape:  APE0959
  Sce:  YDL200c
  Aae:  aq_1495
  Tma:  TM0887
  Fnu:  FN0117
  Cac:  CAC3261
  Cgl:  Cgl2947
  Mtu:  Rv1316c
  MtC:  MT1357
  Mle:  ML1151
  Lla:  L118481
  Spn:  SP1463
  Sau:  SA2335
  Lin:  lin0068_2 lin0995 lin2344
  Bsu:  BS_adaB BS_dat
  Bha:  BH0393 BH1021
  Nos:  alr4990
  Eco:  ada_2 ogt
  EcZ:  Zada_2 Zogt
  Ecs:  ECs1916 ECs3102_2
  Ype:  YPO0072_2 YPO2299
  Sty:  STM1659 STM2265_2
  Vch:  VCA1017
  Pae:  PA0995 PA2118_2 PA3596_2
  Hin:  HI0402
  Pmu:  PM1068
  Xfa:  XF2598
  Nme:  NMB1528
  NmA:  NMA1728
  Rso:  RSc2506 RSc2543 RSc2566 RSc2570_2
  Hpy:  HP0676
  jHp:  jhp0618
  Cje:  Cj0836
  Atu:  AGc1643_2 AGc2253 AGl818_2
  Sme:  SMb20708 SMc01728_2 SMc02841_2
  Bme:  BMEI1762 BMEII0405_2 BMEI1558_2
  Mlo:  mlr1858_2 mlr1860 mlr2526 mlr3180_2
  Ccr:  CC0659 CC0689 CC0709_2 CC3729_2
  Rco:  RC0867 RC0868_2 RC0870
  Ctr:  CT477
  Cpn:  CPn0596
  Tpa:  TP0141
  Mpu:  MYPU_0950_2
_______

[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
  Afu:  AF2208
  Hbs:  VNG2606G_1
  Mac:  MA3197_1
  Mth:  MTH614
  Mja:  MJ0236_1
  Mka:  MK0589_1
  Tac:  Ta1281
  Tvo:  TVN0513
  Pho:  PH1155_1
  Pab:  PAB1646_1
  Pya:  PAE2535_1
  Sso:  SSO0002 SSO2393_1
  Ape:  APE2400_1
  Sce:  YOL055c_1 YPL258c_1 YPR121w_1
  Spo:  SPBP8B7.17c_1 SPBP8B7.18c_1 SPCC18B5.05c
  Aae:  aq_1960
  Tma:  TM0790_1
  Fnu:  FN1759
  Dra:  DRA0171
  Cac:  CAC3095
  Cgl:  Cgl1428_2 Cgl3011 Cgl3018
  Mtu:  Rv0422c
  MtC:  MT0436
  Mle:  ML0295
  Lla:  L0200 L0202
  Spy:  SPy1900
  Spn:  SP0726 SP1598
  Sau:  SA0537 SA1896
  Lin:  lin0342 lin0667
  Bsu:  BS_thiD BS_yjbV
  Bha:  BH1435
  Nos:  all3540
  Eco:  thiD
  EcZ:  ZthiD
  Ecs:  ECs2906
  Ype:  YPO2859
  Sty:  STM2146
  Vch:  VC1296
  Pae:  PA3975
  Hin:  HI0416
  Pmu:  PM1261
  Xfa:  XF0621
  Nme:  NMB1616
  NmA:  NMA1815
  Rso:  RSc0100
  Hpy:  HP0844
  jHp:  jhp0782
  Cje:  Cj1082c
  Atu:  AGl3056
  Sme:  SMb20962
  Bme:  BMEI1732
  Mlo:  mll5788
  Ccr:  CC3223
  Tpa:  TP0115
_______

[H] COG0352 Thiamine monophosphate synthase
  Afu:  AF2074
  Mac:  MA2722
  Tac:  Ta1277
  Tvo:  TVN0508
  Pho:  PH1156
  Pab:  PAB1645
  Sce:  YPL214c_1
  Spo:  SPAC23H4.10c_1
  Aae:  aq_1366 aq_558
  Fnu:  FN1752 FN1758
  Dra:  DRA0174
  Cac:  CAC0495 CAC2920
  Cgl:  Cgl1428_1 Cgl1990
  Mtu:  Rv0414c
  MtC:  MT0427
  Mle:  ML0300
  Lla:  L0201
  Spn:  SP0718 SP0725
  Sau:  SA1894
  Lin:  lin0343
  Bsu:  BS_tenI BS_thiC
  Bha:  BH1431
  Syn:  sll0635
  Nos:  alr1343
  Eco:  thiE
  EcZ:  ZthiE
  Ecs:  ECs4916
  Ype:  YPO3740
  Sty:  STM4163
  Vch:  VC0062_2
  Pae:  PA3976 PA4400_2
  Hin:  HI0417
  Pmu:  PM1260
  Xfa:  XF0378 XF1120_2
  Nme:  NMB2069
  NmA:  NMA0363
  Rso:  RSc0108 RSp0984
  Hpy:  HP0843
  jHp:  jhp0781
  Cje:  Cj1043c Cj1081c
  Atu:  AGl2166 AGl3059
  Sme:  SMb20618 SMc03996
  Bme:  BMEI0329 BMEI1736
  Mlo:  mll5789 mlr3913
  Ccr:  CC3264 CC3746
_______

[L] COG0353 Recombinational DNA repair protein (RecF pathway)
  Aae:  aq_1478
  Fnu:  FN0412
  Dra:  DR0198
  Cac:  CAC0127
  Cgl:  Cgl0245
  Mtu:  Rv3715c
  MtC:  MT3818
  Mle:  ML2329
  Lla:  L0265
  Spy:  SPy1422
  Spn:  SP1672
  Sau:  SA0438
  Lin:  lin2850
  Bsu:  BS_recR
  Bha:  BH0036
  Syn:  slr1426
  Nos:  alr4977
  Eco:  recR
  EcZ:  ZrecR
  Ecs:  ECs0525
  Ype:  YPO3120
  Sty:  STM0486
  Vch:  VC1056
  Pae:  PA1534
  Hin:  HI0443
  Pmu:  PM0206
  Xfa:  XF1809
  Nme:  NMB1237
  NmA:  NMA1406
  Rso:  RSc1194
  Hpy:  HP0925
  jHp:  jhp0859
  Cje:  Cj1263
  Atu:  AGc142
  Sme:  SMc02908
  Bme:  BMEI1910
  Mlo:  mlr5510
  Ccr:  CC0269
  Rpr:  RP438
  Rco:  RC0609
  Ctr:  CT240
  Cpn:  CPn0299
  Tpa:  TP1004
  Uur:  UU089
  Mpu:  MYPU_0510
_______

[R] COG0354 Predicted aminomethyltransferase related to GcvT
  Sce:  YJR122w_2
  Spo:  SPAC21E11.07
  Aae:  aq_2004
  Dra:  DR0358
  Cgl:  Cgl2527
  Mtu:  Rv0811c
  MtC:  MT0832
  Mle:  ML2203
  Syn:  slr0635
  Nos:  all4055
  Eco:  ygfZ
  EcZ:  ZygfZ
  Ecs:  ECs3770
  Ype:  YPO0898
  Sty:  STM3048
  Buc:  BU435
  Vch:  VC2472
  Pae:  PA0759
  Hin:  HI0466
  Pmu:  PM1874
  Xfa:  XF1068
  Nme:  NMB1024
  NmA:  NMA1464
  Rso:  RSc1782
  Atu:  AGc1943
  Sme:  SMc02558
  Bme:  BMEI1282
  Mlo:  mll7789
  Ccr:  CC0385
  Rpr:  RP464
  Rco:  RC0698
_______

[C] COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
  Mac:  MA2440
  Sce:  YDL004w
  Spo:  SPBC13E7.04
  Aae:  aq_673
  Tma:  TM1609
  Fnu:  FN0357
  Cac:  CAC2864
  Cgl:  Cgl1186
  Mtu:  Rv1311
  MtC:  MT1351
  Mle:  ML1146
  Lla:  L5953
  Spy:  SPy0761
  Spn:  SP1507
  Sau:  SA1904
  Lin:  lin0139 lin2672
  Bsu:  BS_atpC
  Bha:  BH3753
  Syn:  slr1330
  Nos:  all5038
  Eco:  atpC
  EcZ:  ZatpC
  Ecs:  ECs4673
  Ype:  YPO4120
  Sty:  STM3864
  Buc:  BU009
  Vch:  VC2763
  Pae:  PA5553
  Hin:  HI0478
  Pmu:  PM1495
  Xfa:  XF1142
  Nme:  NMB1933
  NmA:  NMA0520
  Rso:  RSc3316 RSp0810
  Hpy:  HP1131
  jHp:  jhp1059
  Cje:  Cj0108
  Atu:  AGc4751
  Sme:  SMc02502
  Bme:  BMEI0252
  Mlo:  mll4059
  Ccr:  CC3445
  Rpr:  RP800
  Rco:  RC1234
  Uur:  UU128
  Mpu:  MYPU_2650
  Mpn:  MPN597
  Mge:  MG398
_______

[C] COG0356 F0F1-type ATP synthase, subunit a
  Mac:  MA2437
  Sce:  Q0085
  Aae:  aq_179
  Tma:  TM1616
  Fnu:  FN0364
  Cac:  CAC2871
  Cgl:  Cgl1179
  Mtu:  Rv1304
  MtC:  MT1344
  Mle:  ML1139
  Lla:  L11729
  Spy:  SPy0755
  Spn:  SP1513
  Sau:  SA1911
  Lin:  lin2679
  Bsu:  BS_atpB
  Bha:  BH3760
  Syn:  sll1322
  Nos:  all0010
  Eco:  atpB
  EcZ:  ZatpB
  Ecs:  ECs4680
  Ype:  YPO4127
  Sty:  STM3871
  Buc:  BU002
  Vch:  VC2770
  Pae:  PA5560
  Hin:  HI0485
  Pmu:  PM1488
  Xfa:  XF1149
  Nme:  NMB1940
  NmA:  NMA0513
  Rso:  RSc3323
  Hpy:  HP0828
  jHp:  jhp0767
  Cje:  Cj1204c
  Atu:  AGc1295
  Sme:  SMc00871
  Bme:  BMEI1546
  Mlo:  mlr7411
  Ccr:  CC0368
  Rpr:  RP023
  Rco:  RC0027
  Uur:  UU137
  Mpu:  MYPU_2720
  Mpn:  MPN604
  Mge:  MG405
_______

[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
  Aae:  aq_1582
  Tma:  TM0707
  Fnu:  FN1722
  Dra:  DR0014
  Cac:  CAC3732
  Cgl:  Cgl3036
  Mtu:  Rv3919c
  MtC:  MT4038
  Mle:  ML2708
  Lla:  L180469
  Spy:  SPy0329
  Spn:  SP1285
  Sau:  SA2499
  Lin:  lin2934
  Bsu:  BS_gidB
  Bha:  BH4060
  Syn:  slr0072
  Nos:  alr3182
  Eco:  gidB
  EcZ:  ZgidB
  Ecs:  ECs4682
  Ype:  YPO4129
  Sty:  STM3873
  Vch:  VC2774
  Pae:  PA5564
  Hin:  HI0486
  Pmu:  PM1486
  Xfa:  XF1935
  Nme:  NMB0190
  NmA:  NMA0077
  Rso:  RSc3327
  Hpy:  HP1063
  jHp:  jhp0362
  Cje:  Cj0997
  Atu:  AGc5132
  Sme:  SMc02799
  Bme:  BMEI0008
  Mlo:  mll4481
  Ccr:  CC3754
  Rpr:  RP057
  Rco:  RC0085
  Tpa:  TP0946
  Bbu:  BB0177
  Uur:  UU040
  Mpu:  MYPU_1280
  Mpn:  MPN558
  Mge:  MG380
_______

[L] COG0358 DNA primase (bacterial type)
  Afu:  AF1899
  Hbs:  VNG1784C
  Mac:  MA4635
  Mth:  MTH891
  Mja:  MJ1206
  Mka:  MK0617
  Tac:  Ta0097m
  Tvo:  TVN0156
  Pho:  PH1699
  Pab:  PAB0316
  Pya:  PAE2112
  Sso:  SSO0079
  Ape:  APE2096
  Aae:  aq_1493
  Tma:  TM1452
  Fnu:  FN1319
  Dra:  DR0601
  Cac:  CAC1197 CAC1299
  Cgl:  Cgl2216
  Mtu:  Rv2343c
  MtC:  MT2408
  Mle:  ML0833
  Lla:  L0269
  Spy:  SPy0781
  Spn:  SP1072
  Sau:  SA1391
  Lin:  lin1492
  Bsu:  BS_dnaG
  Bha:  BH1375
  Syn:  sll1868
  Nos:  all1323
  Eco:  dnaG
  EcZ:  ZdnaG
  Ecs:  ECs3949
  Ype:  YPO0644
  Sty:  STM3210
  Buc:  BU056
  Vch:  VC0518
  Pae:  PA0577
  Hin:  HI0532
  Pmu:  PM1240
  Xfa:  XF0430 XF0505 XF2122
  Nme:  NMB1537
  NmA:  NMA1736
  Rso:  RSc0839_1 RSc2216 RSc3229_1
  Hpy:  HP0012
  jHp:  jhp0010
  Cje:  Cj1638
  Atu:  AGc3933
  Sme:  SMc01567
  Bme:  BMEI0530
  Mlo:  mll2467
  Ccr:  CC3049
  Rpr:  RP859
  Rco:  RC1330
  Ctr:  CT794
  Cpn:  CPn0942
  Tpa:  TP0492
  Bbu:  BB0710
  Uur:  UU494
  Mpu:  MYPU_4530
  Mpn:  MPN014 MPN353
  Mge:  MG010 MG250
_______

[J] COG0359 Ribosomal protein L9
  Spo:  SPCC777.17c
  Aae:  aq_2042
  Tma:  TM0863
  Fnu:  FN1828
  Dra:  DR0102
  Cac:  CAC3717
  Cgl:  Cgl2924
  Mtu:  Rv0056
  MtC:  MT0062
  Mle:  ML2682
  Lla:  L0406
  Spy:  SPy2183
  Spn:  SP2204
  Sau:  SA0014
  Lin:  lin0046
  Bsu:  BS_rplI
  Bha:  BH4030
  Syn:  sll1244
  Nos:  all0579
  Eco:  rplI
  EcZ:  ZrplI
  Ecs:  ECs5179
  Ype:  YPO3536
  Sty:  STM4394
  Buc:  BU562
  Vch:  VC0369
  Pae:  PA4932
  Hin:  HI0544
  Pmu:  PM1177
  Xfa:  XF2559
  Nme:  NMB1320
  NmA:  NMA1534
  Rso:  RSc1310
  Hpy:  HP0514
  jHp:  jhp0463
  Cje:  Cj0664c
  Atu:  AGc2015
  Sme:  SMc00565
  Bme:  BMEI1483
  Mlo:  mll7843
  Ccr:  CC1667
  Rpr:  RP041
  Rco:  RC0066
  Ctr:  CT803
  Cpn:  CPn0953
  Tpa:  TP0060
  Bbu:  BB0112
  Uur:  UU551
  Mpu:  MYPU_5160
  Mpn:  MPN231
  Mge:  MG093
_______

[J] COG0360 Ribosomal protein S6
  Sce:  YKL003c
  Spo:  SPAC343.08c
  Aae:  aq_063
  Tma:  TM0603
  Fnu:  FN1657
  Dra:  DR0098
  Cac:  CAC3724
  Cgl:  Cgl2926
  Mtu:  Rv0053
  MtC:  MT0059
  Mle:  ML2685
  Lla:  L0383
  Spy:  SPy1831
  Spn:  SP1541
  Sau:  SA0352
  Lin:  lin0037
  Bsu:  BS_rpsF
  Bha:  BH4050
  Syn:  sll1767
  Nos:  all4802
  Eco:  rpsF
  EcZ:  ZrpsF
  Ecs:  ECs5176
  Ype:  YPO3539
  Sty:  STM4391
  Buc:  BU564
  Vch:  VC0366
  Pae:  PA4935
  Hin:  HI0547
  Pmu:  PM1180
  Xfa:  XF2561
  Nme:  NMB1323
  NmA:  NMA1537
  Rso:  RSc1307
  Hpy:  HP1246
  jHp:  jhp1167
  Cje:  Cj1070
  Sme:  SMc00568
  Bme:  BMEI1480
  Mlo:  mll7846
  Ccr:  CC1669
  Rpr:  RP039
  Rco:  RC0064
  Ctr:  CT801
  Cpn:  CPn0951
  Tpa:  TP0063
  Bbu:  BB0115
  Uur:  UU554
  Mpu:  MYPU_6110
  Mpn:  MPN228
  Mge:  MG090
_______

[J] COG0361 Translation initiation factor 1 (IF-1)
  Afu:  AF0777
  Hbs:  VNG1756G VNG2234G
  Mac:  MA0895 MA1351 MA1353
  Mth:  MTH1004
  Mja:  MJ0445
  Mka:  MK0515
  Tac:  Ta0394a
  Tvo:  TVN0878 TVN1178
  Pho:  PH1568
  Pab:  PAB2441
  Pya:  PAE1072
  Sso:  SSO2375
  Ape:  APE0749a
  Sce:  YMR260c
  Spo:  SPBC25H2.07
  Ecu:  ECU04g1170
  Aae:  aq_075a
  Tma:  TM1477
  Fnu:  FN1287
  Dra:  DR2123
  Cac:  CAC3109
  Cgl:  Cgl0545
  Mtu:  Rv3462c
  MtC:  MT3568
  Mle:  ML1962
  Lla:  L0366
  Spy:  SPy0075
  Spn:  SP0232
  Sau:  SA2026
  Lin:  lin2759
  Bsu:  BS_infA
  Bha:  BH0158
  Syn:  ssl3441
  Nos:  asl4195
  Eco:  infA
  EcZ:  ZinfA
  Ecs:  ECs0969
  Ype:  YPO1370
  Sty:  STM0953
  Buc:  BU315
  Vch:  VC1737
  Pae:  PA2619
  Hin:  HI0548
  Pmu:  PM1031
  Xfa:  XF1445
  Nme:  NMB0163
  NmA:  NMA0108
  Rso:  RSc2239 RSc2998
  Hpy:  HP1298
  jHp:  jhp1218
  Cje:  Cj1590
  Atu:  AGc945
  Sme:  SMc02310
  Bme:  BMEI1671
  Mlo:  msl6453
  Ccr:  CC2343
  Rpr:  RP814
  Rco:  RC1265
  Ctr:  CT323
  Cpn:  CPn0073
  Tpa:  TP0097
  Bbu:  BB0169
  Uur:  UU253
  Mpu:  MYPU_5650
  Mpn:  MPN187
  Mge:  MG173
_______

[G] COG0362 6-phosphogluconate dehydrogenase
  Sce:  YGR256w YHR183w
  Spo:  SPBC660.16
  Ecu:  ECU05g0860
  Tma:  TM0438
  Cgl:  Cgl1417
  Mtu:  Rv1844c
  MtC:  MT1892
  Mle:  ML2065
  Lla:  L0046
  Spn:  SP0375
  Sau:  SA1342
  Lin:  lin1413
  Bsu:  BS_gntZ BS_yqjI
  Syn:  sll0329
  Nos:  alr5275
  Eco:  gnd
  EcZ:  Zgnd
  Ecs:  ECs2830
  Ype:  YPO1541
  Sty:  STM2081
  Buc:  BU107
  Vch:  VCA0898
  Hin:  HI0553
  Pmu:  PM1554
  Nme:  NMB0015
  NmA:  NMA0262
  Atu:  AGc2814
  Sme:  SMc04262
  Bme:  BMEII1124
  Mlo:  mll3321
  Ctr:  CT063
  Cpn:  CPn0360
  Tpa:  TP0331
  Bbu:  BB0561
_______

[G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
  Sce:  YCR073w-a YGR248w YHR163w YNR034w
  Spo:  SPCC16C4.10
  Ecu:  ECU04g0730
  Tma:  TM1154
  Fnu:  FN1143
  Cac:  CAC0187
  Cgl:  Cgl1540 Cgl2592
  Mtu:  Rv1445c
  MtC:  MT1492
  Mle:  ML0579
  Lla:  L14408 L152419
  Spy:  SPy1399
  Spn:  SP1415
  Sau:  SA0527
  Lin:  lin0875 lin0956 lin2452 lin2869
  Bsu:  BS_nagB BS_ybfT
  Bha:  BH0420
  Syn:  sll1479
  Nos:  all0727 alr1602
  Eco:  agaI nagB yieK
  EcZ:  ZagaIm ZnagB
  Ecs:  ECs0708
  Ype:  YPO2627
  Sty:  STM0684
  Vch:  VCA0897 VCA1025
  Pae:  PA3182
  Hin:  HI0141 HI0556
  Pmu:  PM0875 PM1550
  Xfa:  XF1063
  Nme:  NMB1391
  NmA:  NMA1608
  Rso:  RSp1558
  Hpy:  HP1102
  jHp:  jhp1028
  Atu:  AGc1063
  Sme:  SMc03069
  Bme:  BMEII0512
  Mlo:  mll6514
  Ccr:  CC2056
  Ctr:  CT186
  Cpn:  CPn0239
  Tpa:  TP0477
  Bbu:  BB0152 BB0222
  Mpu:  MYPU_3620
_______

[G] COG0364 Glucose-6-phosphate 1-dehydrogenase
  Sce:  YNL241c
  Spo:  SPAC3A12.18 SPAC3C7.13c SPCC794.01c
  Ecu:  ECU08g1850
  Aae:  aq_497
  Tma:  TM1155
  Dra:  DR1596
  Cgl:  Cgl1538
  Mtu:  Rv1121 Rv1447c
  MtC:  MT1153 MT1494
  Lla:  L0044
  Spn:  SP1243
  Sau:  SA1336
  Lin:  lin2085
  Bsu:  BS_yqjJ
  Syn:  slr1843
  Nos:  all4019
  Eco:  zwf
  EcZ:  Zzwf
  Ecs:  ECs2562
  Ype:  YPO2066
  Sty:  STM1886
  Buc:  BU320
  Vch:  VCA0896
  Pae:  PA3183 PA5439
  Hin:  HI0558
  Pmu:  PM1549
  Xfa:  XF1065
  Nme:  NMB1392
  NmA:  NMA1609
  Rso:  RSp1559
  Hpy:  HP1101
  jHp:  jhp1027
  Atu:  AGc1065 AGl98
  Sme:  SMc03070
  Bme:  BMEII0513
  Mlo:  mll6516 mlr4207
  Ccr:  CC2057
  Ctr:  CT185
  Cpn:  CPn0238
  Tpa:  TP0478
  Bbu:  BB0636
_______

[I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
  Afu:  AF0197 AF0366 AF0677 AF0975 AF0976 AF1287 AF2389-C
        AF2389-N
  Hbs:  VNG0484G VNG0997G
  Mac:  MA2912
  Mth:  MTH1603 MTH1604 MTH216 MTH217 MTH701 MTH702
  Tac:  Ta0229 Ta0421 Ta0769 Ta1508m
  Tvo:  TVN0122 TVN1150 TVN1266 TVN1268
  Pya:  PAE2474 PAE2481 PAE2865 PAE2867 PAE3592
  Sso:  SSO1314 SSO1340 SSO1342 SSO1903 SSO2020 SSO2021 SSO2041
        SSO2059 SSO2070 SSO2216 SSO2863 SSO3203 SSO9201
  Ape:  APE1346 APE2604m
  Sce:  YAL054c YLR153c
  Spo:  SPCC417.14c
  Ecu:  ECU05g0310
  Aae:  aq_2103 aq_2104
  Dra:  DR0460 DR2471
  Mtu:  Rv3667
  MtC:  MT3768
  Lla:  L54546
  Sau:  SA1554 SA2402
  Lin:  lin0373 lin2868
  Bsu:  BS_acsA BS_ytcI
  Bha:  BH1137 BH3201 BH3234
  Syn:  sll0542
  Nos:  all4256 all4257
  Eco:  acs prpE
  EcZ:  Z4856 Zacs ZprpE
  Ecs:  ECs0388 ECs4331 ECs5051
  Ype:  YPO0253
  Sty:  STM0371 STM4275
  Vch:  VC0298 VC1340 VCA0829
  Pae:  PA0887 PA0996 PA1997 PA2555 PA3568 PA4733
  Pmu:  PM0692
  Xfa:  XF1038 XF2255
  Rso:  RSc0432_1 RSc1518 RSc1952 RSp0037 RSp0367_1 RSp0651 RSp1265
  Hpy:  HP1045
  Cje:  Cj1537c
  Atu:  AGc4980 AGl1446
  Sme:  SMa0567 SMc00741 SMc00774 SMc04093 SMc04095
  Bme:  BMEI0238 BMEI0307 BMEI1921 BMEI1922 BMEII0815
  Mlo:  mll5286 mll6017 mlr0619 mlr2005 mlr4089 mlr6539
  Ccr:  CC3581
_______

[G] COG0366 Glycosidases
  Mac:  MA1641
  Tac:  Ta0138
  Tvo:  TVN0217
  Pya:  PAE0318
  Sce:  YBR299w YGR287c YGR292w YIL172c YJL216c YJL221c YOL157c
        YPR184w_1
  Spo:  SPAC23D3.14c SPAC23D3.15_1 SPAC27E2.01 SPBC1683.07 SPBC16A3.13 SPBC16D10.05_1 SPBC32H8.13c_1
        SPCC11E10.09c SPCC338.01c_1 SPCC63.02c SPCC757.12
  Tma:  TM0364 TM0767 TM1650 TM1835 TM1840
  Dra:  DR0723 DR0933 DR1141 DR1375 DR1472 DR2036
  Cac:  CAC2686 CAP0098 CAP0168
  Cgl:  Cgl0864 Cgl1197 Cgl2250
  Mtu:  Rv0126 Rv1327c Rv2471
  MtC:  MT0134 MT1369 MT2547
  Lla:  L102412 L124628 L128691 L128692 L128693 L128694 L77437
  Spy:  SPy1302 SPy1304 SPy1973 SPy2096
  Spn:  SP0342 SP1382 SP1883 SP1894
  Sau:  SA0433 SA1338
  Lin:  lin0223 lin0855 lin1222 lin2231 lin2973
  Bsu:  BS_amyE BS_treA BS_ycdG BS_yugT BS_yvdF BS_yvdL
  Bha:  BH0413 BH0872 BH2903 BH2927 BH3868
  Syn:  sll0842
  Nos:  alr0169 alr0663 alr2190 alr4646
  Eco:  amyA b2656 b2657 malS malZ treC ycjM
        ygaR yqaD
  EcZ:  Z3954 Z3955 ZamyA ZmalS ZmalZ ZtreC ZycjMm
  Ecs:  ECs0453 ECs1887 ECs2666 ECs3518 ECs3519 ECs4454 ECs5216
  Ype:  YPO3200 YPO3696 YPO4080
  Sty:  STM0401 STM1963 STM3664 STM4453
  Vch:  VC0911 VCA0250 VCA0860
  Pae:  PA2151 PA2152_1
  Rso:  RSp0240_1 RSp0241
  Atu:  AGc1051 AGc4169 AGl1863 AGpT251
  Sme:  SMb20099 SMc01532 SMc03064
  Mlo:  mll5109 mlr7593
  Ccr:  CC1135 CC2285 CC2286
  Mpu:  MYPU_1030 MYPU_4630 MYPU_6320 MYPU_6330
_______

[E] COG0367 Asparagine synthase (glutamine-hydrolyzing)
  Afu:  AF1439
  Hbs:  VNG0867G
  Mac:  MA0051 MA1966
  Mth:  MTH414
  Mja:  MJ1056 MJ1116
  Mka:  MK0103
  Tac:  Ta0315
  Tvo:  TVN0439
  Pho:  PH1102
  Pab:  PAB0750 PAB1605
  Pya:  PAE0376
  Ape:  APE2041
  Sce:  YGR124w YML096w YPR145w
  Spo:  SPBC119.10 SPBC4F6.11c
  Ecu:  ECU04g0840
  Cac:  CAC2243 CAC2249
  Cgl:  Cgl2148
  Mtu:  Rv2201
  MtC:  MT2257
  Mle:  ML0874
  Lla:  L00396 L0095
  Lin:  lin1772
  Bsu:  BS_asnB BS_asnH BS_asnO
  Bha:  BH1508
  Eco:  asnB
  EcZ:  ZasnB
  Ecs:  ECs0704
  Ype:  YPO2623
  Sty:  STM0680
  Vch:  VC0991
  Pae:  PA0051 PA1214 PA2084 PA3459
  Xfa:  XF0118
  Sme:  SMb20481 SMb20652
  Mlo:  mll5256 mll6743 mlr5888 mlr6755 mlr9125
_______

[H] COG0368 Cobalamin-5-phosphate synthase
  Afu:  AF0037 AF2323
  Hbs:  VNG1580H
  Mac:  MA0939
  Mth:  MTH1112
  Mja:  MJ1438
  Mka:  MK1671
  Tac:  Ta1079
  Tvo:  TVN0495
  Pho:  PH0373
  Pab:  PAB2320
  Pya:  PAE0379
  Sso:  SSO3234
  Ape:  APE2037
  Fnu:  FN0912
  Dra:  DRA0239
  Cac:  CAC1384
  Cgl:  Cgl2153
  Mtu:  Rv2208
  MtC:  MT2264
  Lin:  lin1112
  Bha:  BH1592
  Syn:  slr0636
  Nos:  alr0379
  Eco:  cobS
  EcZ:  ZcobS
  Ecs:  ECs2787
  Sty:  STM2017
  Vch:  VC1238
  Pae:  PA1281
  Rso:  RSc2396
  Atu:  AGc3470
  Sme:  SMc04215
  Bme:  BMEI1100
  Mlo:  mlr1388
_______

[P] COG0369 Sulfite reductase, alpha subunit (flavoprotein)
  Sce:  YFR030w_2 YHR042w YPR048w
  Spo:  SPAC1296.06 SPAC1783.01 SPBC12C2.03c SPBC365.17 SPCC584.01c_2
  Ecu:  ECU05g0240 ECU09g1710
  Sau:  SA2413
  Bsu:  BS_yetO_2 BS_yrhJ_2 BS_yvgR
  Bha:  BH0609
  Syn:  slr1643
  Nos:  all4121
  Eco:  cysJ
  EcZ:  ZcysJ
  Ecs:  ECs3619
  Ype:  YPO3372
  Sty:  STM2948
  Buc:  BU428
  Vch:  VC0384
  Pae:  PA4513_2
  Xfa:  XF1499
  Nme:  NMB1152 NMB1190
  NmA:  NMA1363
  Atu:  AGc238
  Bme:  BMEII1011
  Ccr:  CC3063
  Ctr:  CT435
  Cpn:  CPn0548
_______

[P] COG0370 Fe2+ transport system protein B
  Afu:  AF0246 AF2394
  Mac:  MA3477 MA4337
  Mth:  MTH1361 MTH213
  Mja:  MJ0566
  Mka:  MK1248
  Pho:  PH1205
  Pab:  PAB0708
  Pya:  PAE0323 PAE0324
  Aae:  aq_1255
  Tma:  TM0051
  Dra:  DR1219
  Cac:  CAC0448 CAC1031
  Lla:  L190009
  Sau:  SA2337 SA2369
  Lin:  lin2209
  Syn:  slr1392
  Nos:  alr2118 alr2119
  Eco:  feoB
  EcZ:  ZfeoB
  Ecs:  ECs4251
  Ype:  YPO0132
  Sty:  STM3506
  Vch:  VC2077
  Pae:  PA4358
  Xfa:  XF0933
  Rso:  RSp0251
  Hpy:  HP0687
  jHp:  jhp0627
  Cje:  Cj1398
  Ccr:  CC0712
_______

[C] COG0371 Glycerol dehydrogenase and related enzymes
  Afu:  AF1674
  Hbs:  VNG0406C VNG6270G
  Mac:  MA3686
  Mth:  MTH610
  Mja:  MJ0712
  Mka:  MK1230
  Tac:  Ta1158
  Tvo:  TVN1227
  Pho:  PH1475
  Pab:  PAB1907
  Pya:  PAE1685
  Sso:  SSO0760
  Ape:  APE0519
  Spo:  SPAC13F5.03c
  Tma:  TM0285 TM0423
  Cac:  CAC1626
  Lla:  L198485
  Spy:  SPy2047
  Spn:  SP0253
  Lin:  lin1848
  Bsu:  BS_araM
  Bha:  BH1862
  Syn:  slr1167
  Nos:  alr2764
  Eco:  gldA ybdH
  EcZ:  ZgldA ZybdH
  Ecs:  ECs0638 ECs4874
  Ype:  YPO1556
  Sty:  STM0602 STM3529 STM4108
  Sme:  SMc02038
_______

[C] COG0372 Citrate synthase
  Afu:  AF1340
  Hbs:  VNG2102G
  Mac:  MA0249
  Mth:  MTH1726 MTH962
  Tac:  Ta0169 Ta0819
  Tvo:  TVN0239
  Pya:  PAE1689 PAE3584 PAE3585
  Sso:  SSO2589
  Ape:  APE1713
  Sce:  YCR005c YNR001c YPR001w
  Spo:  SPAC6C3.04 SPBC1703.07_2
  Aae:  aq_150
  Tma:  TM0290
  Dra:  DR0757
  Cgl:  Cgl0639 Cgl0806 Cgl6076
  Mtu:  Rv0889c Rv0896 Rv1131
  MtC:  MT0912 MT0920 MT1163
  Mle:  ML2130
  Lla:  L67186
  Sau:  SA1518
  Lin:  lin1602
  Bsu:  BS_citA BS_citZ BS_mmgD
  Bha:  BH3160 BH3924
  Syn:  sll0401
  Nos:  alr0222
  Eco:  gltA prpC
  EcZ:  ZgltA ZprpC
  Ecs:  ECs0386 ECs0745
  Ype:  YPO1108
  Sty:  STM0369 STM0730
  Vch:  VC1337 VC2092
  Pae:  PA0795 PA1580
  Pmu:  PM0276
  Xfa:  XF1535
  Nme:  NMB0431 NMB0954
  NmA:  NMA1148 NMA2054
  Rso:  RSc1991 RSp0121
  Hpy:  HP0026
  jHp:  jhp0022
  Cje:  Cj1682c
  Atu:  AGc2572 AGl71 AGpA439 AGpA441
  Sme:  SMc02087
  Bme:  BMEI0836
  Mlo:  mll3842 mlr0629 mlr3843 msl6268
  Ccr:  CC1906 CC3642 CC3643
  Rpr:  RP844
  Rco:  RC1308
_______

[H] COG0373 Glutamyl-tRNA reductase
  Afu:  AF1975
  Hbs:  VNG1774G
  Mac:  MA0577
  Mth:  MTH1012
  Mja:  MJ0143
  Mka:  MK0200
  Tac:  Ta0536
  Tvo:  TVN0590
  Pya:  PAE0601
  Sso:  SSO0180
  Ape:  APE2296
  Aae:  aq_1279
  Fnu:  FN0646
  Dra:  DR2547
  Cac:  CAC0095
  Cgl:  Cgl0412
  Mtu:  Rv0509
  MtC:  MT0530
  Mle:  ML2422
  Sau:  SA1496
  Lin:  lin1592
  Bsu:  BS_hemA
  Bha:  BH3048
  Syn:  slr1808
  Nos:  alr1042
  Eco:  hemA
  EcZ:  ZhemA
  Ecs:  ECs1715
  Ype:  YPO2016
  Sty:  STM1777
  Vch:  VC2180
  Pae:  PA4666
  Pmu:  PM0684
  Xfa:  XF2648
  Nme:  NMB0576
  NmA:  NMA0760
  Rso:  RSc2900
  Hpy:  HP0239
  jHp:  jhp0224
  Cje:  Cj0542
  Ctr:  CT662
  Cpn:  CPn0714
_______

[C] COG0374 Ni,Fe-hydrogenase I large subunit
  Afu:  AF1380
  Mac:  MA1142 MA1147
  Mka:  MK1202
  Aae:  aq_662 aq_804 aq_960
  Cac:  CAP0142
  Nos:  all0687
  Eco:  hyaB hybC
  EcZ:  ZhyaB ZhybC
  Ecs:  ECs1129 ECs3879
  Sty:  STM1538 STM1787 STM3147
  Hpy:  HP0632
  jHp:  jhp0575
  Cje:  Cj1266c
_______

[R] COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
  Afu:  AF1367
  Mac:  MA1138
  Mth:  MTH783
  Mja:  MJ0214
  Mka:  MK1547
  Pho:  PH1581
  Pab:  PAB0399
  Aae:  aq_1021
  Dra:  DRA0316
  Syn:  sll1078 slr1675
  Nos:  alr0699
  Eco:  hybF hypA
  EcZ:  ZhybF ZhypA
  Ecs:  ECs3582 ECs3876
  Sty:  STM1531 STM2854 STM3144
  Hpy:  HP0869
  jHp:  jhp0803
  Cje:  Cj0627
_______

[P] COG0376 Catalase (peroxidase I)
  Afu:  AF2233
  Hbs:  VNG6294G
  Mac:  MA0972
  Sce:  YKR066c
  Mtu:  Rv1908c
  MtC:  MT1959
  Bha:  BH0906
  Syn:  sll1987
  Eco:  katG
  EcZ:  ZkatG
  Ecs:  ECs4871
  Ype:  YPO3319
  Sty:  STM4106
  Vch:  VC1560
  Xfa:  XF2232
  Rso:  RSc0775 RSc0776
  Atu:  AGl481
  Sme:  SMa2379
  Mlo:  mlr6940
  Ccr:  CC3043
_______

[C] COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
  Afu:  AF1829_1
  Hbs:  VNG0636G
  Mac:  MA1496
  Tac:  Ta0969m
  Tvo:  TVN1115
  Pho:  PH1449
  Pab:  PAB0493
  Pya:  PAE2928
  Sso:  SSO0665
  Ape:  APE1428
  Aae:  aq_1312
  Tma:  TM1214
  Dra:  DR1505
  Mtu:  Rv3146
  MtC:  MT3234
  Syn:  slr1280
  Nos:  all3841
  Eco:  nuoB
  EcZ:  ZnuoB
  Ecs:  ECs3171
  Ype:  YPO2554
  Sty:  STM2327
  Buc:  BU155
  Pae:  PA2638
  Xfa:  XF0306
  Nme:  NMB0242
  NmA:  NMA0018
  Rso:  RSc2061
  Hpy:  HP1261
  jHp:  jhp1182
  Cje:  Cj1578c
  Atu:  AGc2341
  Sme:  SMa1532 SMc01913
  Bme:  BMEI1157
  Mlo:  mll1371
  Ccr:  CC1955
  Rpr:  RP356
  Rco:  RC0484
_______

[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
  Afu:  AF1368
  Mac:  MA1137 MA1228 MA1272
  Mth:  MTH1672 MTH782
  Mja:  MJ0120 MJ0442
  Mka:  MK0810 MK1546
  Spo:  SPCPB16A4.05c
  Aae:  aq_671
  Fnu:  FN0129
  Dra:  DRA0312 DRA0315
  Cgl:  Cgl0089
  Mtu:  Rv1852
  MtC:  MT1900
  Sau:  SA2087
  Bha:  BH0257
  Syn:  sll0643 sll1079 sll1432
  Nos:  alr0700 alr0735
  Eco:  hypB
  EcZ:  ZhypB ZureG ZureG.2
  Ecs:  ECs1327 ECs3583
  Ype:  YPO2670
  Sty:  STM2855
  Pae:  PA4893
  Hin:  HI0536
  Rso:  RSc2029
  Hpy:  HP0068 HP0900
  jHp:  jhp0063 jhp0837
  Cje:  Cj0623
  Atu:  AGc4348
  Sme:  SMc01830
  Bme:  BMEI0644 BMEI1649
  Mlo:  mll4934
  Uur:  UU429
_______

[H] COG0379 Quinolinate synthase
  Afu:  AF1837m
  Hbs:  VNG1882G
  Mac:  MA0959 MA2716
  Mth:  MTH1827
  Mja:  MJ0407
  Mka:  MK0073
  Pho:  PH0013
  Pab:  PAB2345
  Pya:  PAE3115
  Sso:  SSO0998
  Aae:  aq_1889
  Tma:  TM1644
  Fnu:  FN0008
  Cac:  CAC1025
  Cgl:  Cgl1045
  Mtu:  Rv1594
  MtC:  MT1630
  Mle:  ML1225
  Lin:  lin2133
  Bsu:  BS_nadA
  Bha:  BH1220
  Syn:  sll0622
  Nos:  all4673
  Eco:  nadA
  EcZ:  ZnadA
  Ecs:  ECs0778
  Ype:  YPO1127
  Sty:  STM0756
  Vch:  VC1833
  Pae:  PA1004
  Xfa:  XF1923
  Nme:  NMB0394
  NmA:  NMA2090
  Rso:  RSc2449
  Hpy:  HP1356
  jHp:  jhp1274
  Atu:  AGl1511
  Sme:  SMc02601
  Mlo:  mll5835 mll9104
  Ccr:  CC2912
_______

[G] COG0380 Trehalose-6-phosphate synthase
  Mth:  MTH1757
  Tac:  Ta1210
  Tvo:  TVN1254
  Pya:  PAE1272_1
  Sce:  YBR126c YDR074w_1 YML100w_2 YMR261c_2
  Spo:  SPAC19G12.15c_1 SPAC22F8.05_1 SPAC328.03 SPAC3G6.09c_1 SPACUNK4.16c_1
  Ecu:  ECU01g0800 ECU01g0870_1
  Cgl:  Cgl2573
  Mtu:  Rv3490
  MtC:  MT3594
  Mle:  ML2254
  Syn:  sll1566
  Eco:  otsA
  EcZ:  ZotsA
  Ecs:  ECs2604
  Sty:  STM1928
  Rso:  RSp0731 RSp1105
  Sme:  SMa0233
  Mlo:  mll0691 mlr9595 msr9761
_______

[M] COG0381 UDP-N-acetylglucosamine 2-epimerase
  Hbs:  VNG2639G
  Mth:  MTH837
  Mja:  MJ1504
  Pho:  PH1617
  Pab:  PAB0379
  Tma:  TM0610 TM1034
  Dra:  DR1561
  Cac:  CAC2874 CAC3064
  Lla:  L98310
  Spn:  SP0357 SP0360
  Sau:  SA0150 SA0159 SA1913
  Lin:  lin2681
  Bsu:  BS_yvyH
  Syn:  slr0624
  Nos:  all2497
  Eco:  wecB
  EcZ:  ZwecB
  Ecs:  ECs4719
  Ype:  YPO3864
  Sty:  STM3920
  Vch:  VC0917
  Pae:  PA3148
  Pmu:  PM1009
  Nme:  NMB0070
  NmA:  NMA0199
  Rso:  RSp0510 RSp1017
  Cje:  Cj1142 Cj1328
  Rpr:  RP334
  Rco:  RC0458
_______

[H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
  Afu:  AF0404 AF1648 AF2176
  Hbs:  VNG0610G VNG1682C
  Mac:  MA0790 MA0791 MA0961 MA2684 MA4010 MA4420
  Mth:  MTH1098 MTH1809 MTH877
  Mja:  MJ0279
  Mka:  MK0953
  Tac:  Ta0996m Ta1198
  Tvo:  TVN0407 TVN0735
  Pho:  PH0027
  Pab:  PAB0018
  Pya:  PAE1784 PAE2375
  Sso:  SSO0125 SSO0583
  Ape:  APE0159 APE1570
  Sce:  YNR041c
  Spo:  SPAC56F8.04c
  Aae:  aq_052
  Dra:  DR0809 DR0851
  Cac:  CAC0800 CAC1818
  Cgl:  Cgl0603 Cgl2819
  Mtu:  Rv3806c
  MtC:  MT3913
  Mle:  ML0095
  Bha:  BH1650
  Syn:  slr0056 slr0926 slr1736
  Nos:  all0419 all4480 alr3448 alr3506 alr3553
  Eco:  ubiA
  EcZ:  ZubiA
  Ecs:  ECs5023
  Ype:  YPO0311
  Sty:  STM4234
  Vch:  VC0094
  Pae:  PA5358
  Pmu:  PM1751
  Xfa:  XF0068
  Nme:  NMB0735
  NmA:  NMA0945
  Rso:  RSc0173 RSc2686
  Hpy:  HP1360
  jHp:  jhp1278
  Cje:  Cj0164c
  Atu:  AGc1159
  Sme:  SMc00988
  Bme:  BMEI1518 BMEII0437
  Mlo:  mll1266 mll7442 mlr9393
  Ccr:  CC3421
  Rpr:  RP686
  Rco:  RC1049
  Ctr:  CT219
  Cpn:  CPn0265
_______

[G] COG0383 Alpha-mannosidase
  Tvo:  TVN0209
  Pho:  PH0835
  Sso:  SSO3006
  Sce:  YGL156w
  Spo:  SPAC513.05
  Tma:  TM1231 TM1851
  Mtu:  Rv0648
  MtC:  MT0676
  Lla:  L130682
  Spy:  SPy1604
  Spn:  SP2143
  Lin:  lin0424 lin0449 lin2122 lin2123
  Bha:  BH0788 BH0789 BH0791
  Syn:  slr0323
  Nos:  all0848
  Eco:  ybgG
_______

[R] COG0384 Predicted epimerase, PhzC/PhzF homolog
  Hbs:  VNG0332C VNG6408G
  Mac:  MA3532
  Sce:  YHR029c
  Spo:  SPAC186.06
  Fnu:  FN1427
  Dra:  DR1178 DR1330
  Cac:  CAC3446
  Cgl:  Cgl2688
  Mtu:  Rv2716
  MtC:  MT2789
  Lin:  lin0782
  Bsu:  BS_yfhB
  Bha:  BH0283 BH1950 BH1962 BH1964
  Syn:  slr1019
  Nos:  all1944
  Eco:  yddE
  EcZ:  ZyddE
  Ecs:  ECs2067
  Sty:  STM1581
  Vch:  VCA0395
  Pae:  PA1367 PA1904 PA2770 PA3578 PA4215 PA4716
  Pmu:  PM1503
  Rso:  RSc0253
  Atu:  AGc2485 AGl1187 AGpT113
  Sme:  SMa0180 SMc03984 SMc04271
  Bme:  BMEI0630 BMEI1835
  Mlo:  mll1393
  Ccr:  CC3221
_______

[R] COG0385 Predicted Na+-dependent transporter
  Mac:  MA2003 MA2632
  Sce:  YMR034c
  Aae:  aq_2129
  Cgl:  Cgl1229 Cgl2276 Cgl2983
  Mle:  ML0029
  Sau:  SA2112
  Bsu:  BS_ybaS BS_yocS
  Bha:  BH0489 BH0858
  Syn:  sll1428
  Nos:  alr5254
  Eco:  yfeH
  EcZ:  ZyfeH
  Ecs:  ECs3282
  Ype:  YPO2260
  Sty:  STM2425 STM4195
  Pae:  PA1650 PA2026 PA3264
  Nme:  NMB0705
  NmA:  NMA0046 NMA0909
  Rso:  RSc2538
  Atu:  AGl1918 AGl570 AGl571
  Sme:  SMc04030
  Bme:  BMEI0346 BMEI0922
  Mlo:  mlr6784
  Ccr:  CC1657
_______

[O] COG0386 Glutathione peroxidase
  Sce:  YBR244w YIR037w YKL026c
  Spo:  SPBC32F12.03c
  Ecu:  ECU02g0440
  Fnu:  FN2007
  Cac:  CAC1549 CAC1570 CAC1571
  Cgl:  Cgl2537
  Lla:  L0198
  Spy:  SPy0605
  Spn:  SP0313
  Sau:  SA1146 SA2414
  Lin:  lin0982
  Bsu:  BS_bsaA
  Bha:  BH2830
  Syn:  slr1171 slr1992
  Eco:  btuE
  EcZ:  ZbtuE
  Ecs:  ECs2417
  Ype:  YPO2424
  Sty:  STM1341
  Pae:  PA0838 PA1287 PA2826
  Xfa:  XF1604 XF1890
  Nme:  NMB1621
  NmA:  NMA1820
  Rso:  RSc0307 RSc2674
  Ccr:  CC1730
  Uur:  UU291
_______

[P] COG0387 Ca2+/H+ antiporter
  Sce:  YDL128w YNL321w
  Spo:  SPAC521.04c SPCC1795.02c
  Dra:  DR0373
  Cgl:  Cgl1058
  Mtu:  Rv1607
  MtC:  MT1642
  Mle:  ML1267
  Bsu:  BS_yfkE
  Syn:  slr1336
  Nos:  all0626
  Eco:  chaA
  EcZ:  ZchaA
  Ecs:  ECs1721
  Ype:  YPO1958
  Sty:  STM1771
  Atu:  AGc3989
  Sme:  SMa0675 SMc02224
  Mlo:  mlr6933
_______

[R] COG0388 Predicted amidohydrolase
  Afu:  AF0115 AF1647
  Hbs:  VNG0936C
  Mac:  MA3009 MA4525
  Mth:  MTH1811
  Tac:  Ta0888m Ta1208
  Tvo:  TVN0974 TVN1257
  Pho:  PH0642
  Pab:  PAB0277 PAB1449
  Pya:  PAE2075 PAE3023
  Sso:  SSO0031 SSO0422 SSO2174
  Ape:  APE1343 APE2055 APE2277
  Sce:  YHR074w_1 YIL164c YIL165c YJL126w YJR062c YLR351c
  Spo:  SPAC26A3.11 SPBC23E6.03c SPBC651.02 SPCC553.02_1 SPCC965.09
  Aae:  aq_103 aq_959_1
  Tma:  TM0183 TM1253_1
  Dra:  DR2184 DR2433 DR2535
  Cac:  CAC1050_1 CAC1665 CAC1782_1
  Cgl:  Cgl2733
  Mtu:  Rv0480c Rv2438c_1
  MtC:  MT0498 MT2513_1
  Mle:  ML1463_1 ML2449
  Spn:  SP0922
  Sau:  SA1841
  Lin:  lin0310 lin0785
  Bsu:  BS_yhcX_2 BS_ykrU
  Bha:  BH1047 BH1089_2
  Syn:  sll0601 sll0784 sll1640 slr1691_1
  Nos:  all5023 alr2001 alr2485_1
  Eco:  yafV ybeM yobB
  EcZ:  Z2893 ZyafV ZybeM
  Ecs:  ECs0246 ECs0664 ECs2553
  Ype:  YPO0938 YPO2912_1 YPO3671
  Sty:  STM0308 STM0631 STM1877 STM3133
  Vch:  VC0421
  Pae:  PA0293 PA2074 PA3093 PA3366 PA3598 PA3797 PA4475
        PA4802
  Xfa:  XF1961_1 XF2443
  Nme:  NMB0441
  NmA:  NMA2044
  Rso:  RSc0704 RSc1823 RSc2347_1 RSc2658
  Hpy:  HP0294 HP0309 HP0757 HP1238 HP1481
  jHp:  jhp0279 jhp0294 jhp0694 jhp1159 jhp1374
  Cje:  Cj0947c Cj1056c
  Atu:  AGc3052_1 AGc3058 AGc413 AGl2636 AGpA799
  Sme:  SMc00161_1 SMc01962 SMc02442
  Bme:  BMEI0185 BMEI0969_1
  Mlo:  mll0818_1 mll3450
  Ccr:  CC0212 CC0828 CC2963 CC3619_1
  Tpa:  TP0780_1
_______

[L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair
  Hbs:  VNG1014G
  Mac:  MA0974 MA4027
  Sso:  SSO2448
  Sce:  YDR419w YOR346w_2
  Spo:  SPBC16A3.11_1 SPCC553.07c
  Fnu:  FN1199
  Cac:  CAC0285
  Cgl:  Cgl0600 Cgl2094
  Mtu:  Rv1537 Rv3056 Rv3394c
  MtC:  MT1589 MT3142 MT3501
  Lla:  L0305 L180104
  Spy:  SPy1846
  Spn:  SP0458
  Sau:  SA1196 SA1711
  Lin:  lin2082 lin2823 pli0067
  Bsu:  BS_uvrX BS_yobH BS_yozK BS_yqjH BS_yqjW
  Bha:  BH1472 BH2741
  Syn:  slr0790
  Nos:  alr7254
  Eco:  dinP umuC
  EcZ:  ZdinP ZumuC
  Ecs:  ECs0258 ECs1679
  Ype:  YPO3231
  Sty:  PSLT054 STM0313 STM1997
  Vch:  VC2287
  Pae:  PA0670 PA0923
  Pmu:  PM0467
  Nme:  NMB1448
  NmA:  NMA1661
  Rso:  RSc1587 RSp0799
  Atu:  AGc2382 AGl3171 AGpA144 AGpA692 AGpT174
  Sme:  SMa0886 SMa0890 SMa2355 SMc01373 SMc03789
  Bme:  BMEI1875 BMEII0656
  Mlo:  mll9709 mlr0866 mlr1877 mlr4427
  Ccr:  CC2466 CC3212
  Uur:  UU437
  Mpu:  MYPU_1880
  Mpn:  MPN537
  Mge:  MG360
_______

[R] COG0390 ABC-type uncharacterized transport system, permease component
  Mac:  MA0966
  Mja:  MJ0938
  Aae:  aq_1210
  Tma:  TM0193
  Mtu:  Rv3000
  MtC:  MT3080
  Sau:  SA2242
  Bsu:  BS_yjkA
  Syn:  slr1647
  Nos:  all3011
  Eco:  ybbM
  EcZ:  ZybbM
  Ecs:  ECs0554
  Sty:  STM0503
  Rso:  RSc0748
_______

[S] COG0391 Uncharacterized conserved protein
  Afu:  AF0917
  Hbs:  VNG1429C
  Mac:  MA0714
  Mth:  MTH1018
  Mja:  MJ1256
  Mka:  MK1489
  Sce:  YNL011c
  Aae:  aq_778
  Tma:  TM1709
  Dra:  DR1435
  Cac:  CAC0512
  Cgl:  Cgl1552
  Mtu:  Rv1422 Rv3261
  MtC:  MT1465 MT3359
  Mle:  ML0564 ML0759
  Lla:  L189428
  Spy:  SPy0653
  Spn:  SP1565
  Sau:  SA0721
  Lin:  lin2616
  Bsu:  BS_yvcK
  Bha:  BH3568
  Syn:  sll0154
  Nos:  alr2298
  Eco:  ybhK
  EcZ:  ZybhK
  Ecs:  ECs0858
  Ype:  YPO1158
  Sty:  STM0801
  Vch:  VC1023
  Pmu:  PM0626
_______

[S] COG0392 Predicted integral membrane protein
  Afu:  AF0581_2 AF2231
  Hbs:  VNG0197C VNG0318G_2 VNG0407H
  Mac:  MA0799 MA1182 MA2251 MA2695_1 MA3142 MA4077_2
  Mth:  MTH1261 MTH378 MTH887
  Mja:  MJ1078 MJ1595
  Mka:  MK0770 MK1387
  Pho:  PH1989
  Pab:  PAB0826 PAB1174
  Aae:  aq_406 aq_818
  Tma:  TM0470 TM1390
  Cac:  CAC3016
  Cgl:  Cgl2808
  Mtu:  Rv0204c Rv0585c
  MtC:  MT0214 MT0613
  Mle:  ML2618
  Sau:  SA1193_1
  Lin:  lin1803_1 lin2698
  Bsu:  BS_yfiW
  Syn:  slr0712
  Nos:  all0041 all0197
  Eco:  ybhN
  EcZ:  ZybhN
  Ecs:  ECs0866
  Sty:  STM0811
  Pae:  PA0920_1 PA2154 PA4313
  Xfa:  XF1641_1
  Rso:  RSp1522_1
  Atu:  AGc2100 AGc4580_1
  Sme:  SMb20093 SMc00611_1 SMc02853
  Bme:  BMEI0678 BMEII0682_1
  Mlo:  mll8344 mlr7557
  Uur:  UU450
  Mpu:  MYPU_4840_2
  Mpn:  MPN435
  Mge:  MG306
_______

[S] COG0393 Uncharacterized conserved protein
  Afu:  AF0869
  Hbs:  VNG2432C
  Mac:  MA3383
  Mth:  MTH507 MTH544
  Mja:  MJ1170 MJ1413
  Tac:  Ta0182
  Tvo:  TVN0673
  Pho:  PH1682
  Pab:  PAB0329
  Sso:  SSO1976
  Tma:  TM0763
  Mtu:  Rv1762c
  MtC:  MT1811
  Mle:  ML2476
  Lla:  L158972
  Lin:  lin0240
  Bha:  BH0643 BH1111
  Syn:  sll1118
  Nos:  alr2488
  Eco:  ybjQ
  EcZ:  Z1099
  Ecs:  ECs0952
  Sty:  STM0930
  Vch:  VCA0951
  Pmu:  PM1668
  Ccr:  CC2377
_______

[T] COG0394 Protein-tyrosine-phosphatase
  Afu:  AF1361 AF2430_2
  Hbs:  VNG7126
  Mac:  MA3103
  Mth:  MTH1355
  Sce:  YPR073c
  Spo:  SPAC1071.12c
  Aae:  aq_635 aq_685
  Dra:  DRA0123
  Cac:  CAC2881 CAP0105
  Cgl:  Cgl0264 Cgl0344 Cgl1475 Cgl1476 Cgl2190
  Mtu:  Rv2234 Rv2643_2
  MtC:  MT2293 MT2720_2
  Lla:  L11493 L67624
  Spy:  SPy0039
  Spn:  SP2028
  Sau:  SA1697 SA1917 SAP018
  Lin:  lin0937 lin2332 lin2684
  Bsu:  BS_yfkJ BS_yqcM BS_ywlE
  Bha:  BH2238 BH2998 BH3769
  Syn:  slr0328 slr0946
  Nos:  alr1067 alr1105 alr5068
  Eco:  wzb yccY
  EcZ:  Zwzb ZyccY
  Ecs:  ECs1138 ECs2866
  Sty:  STM2117
  Vch:  VC0916 VC1041
  Pae:  PA2279 PA2978
  Pmu:  PM1017 PM1569
  Xfa:  XF2298
  Nme:  NMB1267
  NmA:  NMA1472
  Rso:  RSp1019 RSp1128
  Cje:  Cj1258
  Atu:  AGc946
  Sme:  SMc02309
  Bme:  BMEI1670 BMEI1863
  Mlo:  mll4349 mll6454 mlr3966
  Ccr:  CC2344 CC2368
_______

[G] COG0395 ABC-type sugar transport system, permease component
  Hbs:  VNG6280G
  Tac:  Ta0146 Ta0689
  Tvo:  TVN0207 TVN1145
  Pho:  PH0023 PH0204 PH0755 PH1036 PH1216
  Pab:  PAB2231 PAB2335
  Pya:  PAE0686 PAE1322
  Sso:  SSO1001 SSO2714_2 SSO2849 SSO3068
  Ape:  APE0040 APE1633 APE2252
  Tma:  TM0279 TM0420 TM0430 TM0598 TM0812 TM1122 TM1233
        TM1853
  Dra:  DR1436
  Cac:  CAC0428 CAC0666 CAC3670
  Cgl:  Cgl0703 Cgl1351 Cgl2406
  Mtu:  Rv1237 Rv2039c Rv2317 Rv2834c
  MtC:  MT1275 MT2099 MT2380 MT2900
  Mle:  ML1088 ML1425 ML1769
  Lla:  L128777
  Spy:  SPy0255 SPy1593
  Spn:  SP0091 SP1681 SP1688 SP1797 SP1895
  Lin:  lin0219 lin0761 lin0854 lin1843 lin2116 lin2970
  Bsu:  BS_amyC BS_araQ BS_lplC BS_yesQ BS_ytcP BS_yurM
  Bha:  BH0481 BH0795 BH0903 BH1066 BH1078 BH1119 BH1246
        BH1866 BH1912 BH1926 BH2113 BH2224 BH2724 BH3682
        BH3688 BH3847
  Syn:  slr0531 slr1723
  Nos:  all0261 all4824 all5282
  Eco:  ugpE ycjP
  EcZ:  ZugpE ZycjP
  Ecs:  ECs1891 ECs4297
  Ype:  YPO0614 YPO1721 YPO1895 YPO2475 YPO3470 YPO3794
  Sty:  STM3555
  Vch:  VC1551
  Pae:  PA2340 PA3188
  Pmu:  PM1760
  Xfa:  XF2446
  Rso:  RSc1266 RSc2142 RSc3049
  Atu:  AGc1050 AGc2592 AGc4555 AGc4716 AGc532 AGc688 AGl1015
        AGl1221 AGl1293 AGl1773 AGl1910 AGl2945 AGl2962 AGl3066
        AGl3158 AGl3246 AGl3273 AGl3281 AGl3322 AGl3353 AGl3392
        AGl3416 AGl3420 AGl3561 AGl460 AGl624 AGl835 AGpA119
        AGpA376 AGpA680 AGpA79
  Sme:  SMa0711 SMa1341 SMa1362 SMa2309 SMb20233 SMb20327 SMb20418
        SMb20632 SMb20658 SMb20969 SMb21105 SMb21150 SMb21219 SMb21458
        SMb21593 SMb21602 SMb21654 SMc01498 SMc01626 SMc01979 SMc02473
        SMc02516 SMc02871 SMc03063 SMc04137 SMc04257 SMc04394
  Bme:  BMEI1714 BMEII0114 BMEII0541 BMEII0592 BMEII0622 BMEII0623 BMEII0752
        BMEII0942
  Mlo:  mll0704 mll0851 mll1714 mll3315 mll3381 mll3501 mll3588
        mll4146 mll4924 mll5110 mll5300 mll7152 mll7213 mll8486
        mlr2246 mlr2328 mlr3053 mlr3641 mlr4774 mlr4913 mlr6438
        mlr6653 mlr7002 mlr7094 mlr7227 mlr7265
  Tpa:  TP0076
  Mpu:  MYPU_0280 MYPU_1000 MYPU_4990
  Mpn:  MPN136
  Mge:  MG189
_______

[O] COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
  Afu:  AF2364
  Hbs:  VNG0524G
  Mac:  MA0937 MA4406
  Mth:  MTH1149
  Mja:  MJ0035
  Mka:  MK1233
  Tac:  Ta0202
  Tvo:  TVN1391
  Pho:  PH0882 PH1384
  Pab:  PAB1855
  Pya:  PAE1808
  Sso:  SSO0925
  Ape:  APE1702
  Tma:  TM1368 TM1417
  Dra:  DR2107
  Cac:  CAC3288
  Cgl:  Cgl1525
  Mtu:  Rv1463
  MtC:  MT1510
  Mle:  ML0595
  Lla:  L34806
  Spy:  SPy0285
  Spn:  SP0867
  Sau:  SA0774
  Lin:  lin2510
  Bsu:  BS_yurY
  Bha:  BH3471
  Syn:  slr0075
  Nos:  alr2493
  Eco:  ynhD
  EcZ:  ZynhD
  Ecs:  ECs2389
  Ype:  YPO2402
  Sty:  STM1371
  Xfa:  XF1475
  Atu:  AGc3346
  Sme:  SMc00531
  Bme:  BMEI1041
  Mlo:  mlr0019
  Ccr:  CC1862
  Ctr:  CT685
  Cpn:  CPn0691
  Tpa:  TP0611
_______

[S] COG0397 Uncharacterized conserved protein
  Sce:  YPL222w
  Spo:  SPAC20G4.05c
  Cgl:  Cgl1953
  Bha:  BH3939
  Syn:  sll1464
  Nos:  all2876
  Eco:  ydiU
  EcZ:  Z2735
  Ecs:  ECs2413
  Sty:  STM1345
  Vch:  VC1931
  Pae:  PA5023
  Xfa:  XF2619
  Rso:  RSc1748
  Atu:  AGc1725
  Sme:  SMc00453
  Ccr:  CC3331 CC3334
_______

[S] COG0398 Uncharacterized conserved protein
  Hbs:  VNG1641H
  Mac:  MA1405
  Sce:  YKR088c
  Spo:  SPBC1711.09c
  Cac:  CAC0677 CAC2706
  Cgl:  Cgl1494
  Mtu:  Rv0625c Rv1491c
  MtC:  MT0653 MT1538
  Lla:  L114884
  Spy:  SPy1288 SPy1289
  Spn:  SP1720
  Sau:  SA0824
  Lin:  lin0932
  Bsu:  BS_yhjE BS_yqeD BS_ytxB
  Bha:  BH2293 BH3135
  Syn:  slr0305
  Nos:  all5119 all7589 alr2207 alr5186 asr2206
  Eco:  ydjX ydjZ
  EcZ:  ZydjX ZydjZ
  Ecs:  ECs2456 ECs2458
  Vch:  VC1723
  Sme:  SMc01718
  Ccr:  CC0529 CC1538
_______

[M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
  Mth:  MTH1188 MTH334
  Mja:  MJ1066
  Mka:  MK0156
  Pab:  PAB0774
  Pya:  PAE2053
  Aae:  aq_1724
  Tma:  TM0572 TM0668
  Cac:  CAC2178 CAC2260 CAC2350
  Cgl:  Cgl0347
  Mtu:  Rv1503c Rv1504c Rv3402c
  MtC:  MT3510
  Spn:  SP1837
  Bsu:  BS_spsC BS_yhjL BS_yvfE
  Syn:  slr1140 slr1615 slr1666 slr2111_2 slr2114
  Nos:  all0498 alr0556 alr3012
  Eco:  wecE yfbE
  EcZ:  Z3511 Zper ZwecE
  Ecs:  ECs2841 ECs3141 ECs4724
  Ype:  YPO2422 YPO3113 YPO3859
  Sty:  STM2090 STM2297 STM3925
  Vch:  VC0244
  Pae:  PA3155 PA3552
  Pmu:  PM1014
  Nme:  NMB1821
  NmA:  NMA0638
  Rso:  RSc1322 RSp1006
  Hpy:  HP0366
  jHp:  jhp1015
  Cje:  Cj0505c Cj1121c Cj1294 Cj1320
  Sme:  SMb21248
  Bme:  BMEI0421 BMEI1414
  Mlo:  mll7579 mlr6765
  Ccr:  CC0234 CC1012 CC3187 CC3611
  Tpa:  TP0078 TP0440
_______

[R] COG0400 Predicted esterase
  Sce:  YLR118c
  Spo:  SPAC8E11.04c SPAC9G1.08c
  Dra:  DR0657
  Lla:  L79507
  Sau:  SA2306
  Lin:  lin0589 lin0754
  Bsu:  BS_yodD
  Bha:  BH2174
  Syn:  sll1284
  Nos:  all3113
  Eco:  ypfH
  EcZ:  ZypfH
  Ecs:  ECs3335
  Pae:  PA3859
  Xfa:  XF1624
  Atu:  AGc1928_2 AGc2039 AGc4453
  Sme:  SMa1831 SMb21203 SMc01956_2
  Bme:  BMEII0306
  Mlo:  mll3682 mll8374
  Rpr:  RP744
  Rco:  RC1147
  Ctr:  CT136
  Cpn:  CPn0271
_______

[S] COG0401 Uncharacterized homolog of Blt101
  Sce:  YDL123w YDR276c YDR525w-a YJL151c
  Spo:  SPBC713.11c SPCC1183.09c
  Syn:  ssr1169
  Nos:  asl0163 asr3796
  Eco:  yqaE
  EcZ:  Z3965
  Ecs:  ECs3527
  Sty:  STM2796
  Pae:  PA0567
  Atu:  AGc727
_______

[FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases
  Afu:  AF0550 AF0997 AF1775
  Hbs:  VNG1205C VNG2249G VNG6258C
  Mac:  MA1276 MA4095
  Mth:  MTH1505 MTH994
  Mja:  MJ0699 MJ1541
  Mka:  MK0366 MK1050
  Tac:  Ta1060m
  Tvo:  TVN0515
  Pho:  PH1515
  Pab:  PAB0443
  Pya:  PAE0309
  Sso:  SSO0398 SSO0679 SSO2438 SSO2770
  Ape:  APE2436
  Sce:  YDL238c
  Spo:  SPAC1F8.04c SPCC1672.03c
  Aae:  aq_587
  Tma:  TM0936
  Dra:  DR0824 DRA0180
  Cac:  CAC0282
  Cgl:  Cgl0075
  Spn:  SP1356
  Bha:  BH0185 BH0746 BH1692
  Syn:  slr1237
  Nos:  alr3749
  Eco:  codA ssnA yahJ ygfP
  EcZ:  Z4218 ZcodA ZyahJ ZygfP
  Ecs:  ECs0373 ECs0390 ECs3752 ECs3756
  Ype:  YPO0162 YPO1974
  Sty:  STM3334
  Pae:  PA0134 PA0142 PA0437 PA1521 PA3170 PA5106
  Hin:  HI0842
  Pmu:  PM0565 PM1882
  Xfa:  XF2472
  Rso:  RSc1594 RSc2099 RSc2119 RSp0551
  Hpy:  HP0267
  jHp:  jhp0252
  Cje:  Cj0067
  Atu:  AGc4212 AGl1821 AGl363 AGl364 AGl93GM
  Sme:  SMa0551 SMa2371 SMb20128 SMb20288 SMb20849 SMb21293 SMc00673
        SMc02414 SMc02416 SMc02420 SMc02421
  Bme:  BMEI1571 BMEII0369
  Mlo:  mll1290 mll2061 mll8318 mlr5142 mlr5363
  Ccr:  CC0961 CC2616
_______

[E] COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
  Hbs:  VNG1603G
  Tac:  Ta1358
  Tvo:  TVN0297
  Pho:  PH1995
  Pab:  PAB1171
  Sso:  SSO0918
  Ape:  APE2124
  Sce:  YMR189w_1
  Spo:  SPAC13G6.06c_1
  Aae:  aq_1109
  Tma:  TM0213
  Dra:  DR1809_1
  Mtu:  Rv1832_1
  MtC:  MT1880_1
  Mle:  ML2072_1
  Sau:  SA1366
  Lin:  lin1386
  Bsu:  BS_yqhJ
  Bha:  BH2815
  Syn:  slr0293_1
  Nos:  all4607_1
  Eco:  gcvP_1
  EcZ:  ZgcvP_1
  Ecs:  ECs3774_1
  Ype:  YPO0905_1
  Sty:  STM3053_1
  Pae:  PA2445_1 PA5213_1
  Xfa:  XF1385_1
  NmA:  NMA1934_1
  Rso:  RSc3295_1
  Atu:  AGc2699_1
  Sme:  SMc02049_1
  Bme:  BMEII0561_1
  Mlo:  mlr0885_1
  Ccr:  CC3353
_______

[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase)
  Hbs:  VNG1606G VNG2640G
  Tac:  Ta0010m
  Tvo:  TVN0058
  Pho:  PH1146
  Pab:  PAB1638
  Sso:  SSO0919
  Ape:  APE1695
  Sce:  YDR019c
  Spo:  SPAC31G5.14
  Aae:  aq_1458
  Tma:  TM0211
  Dra:  DR1812
  Mtu:  Rv2211c
  MtC:  MT2267
  Mle:  ML0865
  Sau:  SA1367
  Lin:  lin1385
  Bsu:  BS_yqhI
  Bha:  BH2816
  Syn:  sll0171
  Nos:  all4609
  Eco:  gcvT
  EcZ:  Z1548 ZgcvT
  Ecs:  ECs1288 ECs3776
  Ype:  YPO0907
  Sty:  STM3055
  Pae:  PA2442 PA5215 PA5418_2
  Xfa:  XF0183
  Nme:  NMB0574
  NmA:  NMA0758
  Rso:  RSc1103_2 RSc3293 RSp0048_2
  Atu:  AGc2622 AGc2701 AGc3012_2 AGl1103_2 AGl1275gl_2 AGl1574_2
  Sme:  SMa1483_2 SMa2145 SMb21534_2 SMc01662_2 SMc01663_2 SMc01987_2 SMc02047
        SMc02606_2 SMc03931_2 SMc04148_2 SMc04153
  Bme:  BMEI0684_2 BMEI1720_2 BMEII0559
  Mlo:  mll1258_2 mll1517_2 mll1653_2 mll2449_2 mll3108_2 mll5230_2 mll5369_2
        mll6238_2 mll7302 mll7304_2 mlr0883 mlr1213_2 mlr1275_2 mlr1280_2
        mlr1283_2 mlr3677 mlr4790 mlr6972 mlr6973 mlr7320
  Ccr:  CC3355
_______

[E] COG0405 Gamma-glutamyltransferase
  Tac:  Ta0994
  Tvo:  TVN0893
  Pya:  PAE3371
  Sso:  SSO3216
  Ape:  APE0137
  Sce:  YLR299w
  Spo:  SPAC56E4.06c SPAC664.09
  Ecu:  ECU05g1240
  Fnu:  FN0876 FN0941
  Dra:  DR1524
  Cgl:  Cgl0930
  Mtu:  Rv0773c Rv2394
  MtC:  MT0797 MT2464
  Sau:  SA0202
  Bsu:  BS_ggt BS_ywrD
  Bha:  BH0867
  Syn:  slr1269
  Nos:  alr2051
  Eco:  ggt
  EcZ:  Zggt
  Ecs:  ECs4293
  Sty:  STM3551
  Vch:  VC0194 VCA0558
  Pae:  PA0164 PA0361 PA1338
  Xfa:  XF0984
  Nme:  NMB1057
  NmA:  NMA1255
  Rso:  RSc2501 RSc2921 RSp0274
  Hpy:  HP1118
  jHp:  jhp1046
  Atu:  AGl319 AGpA750
  Sme:  SMb20585
  Mlo:  mll6984 mlr5711
  Ccr:  CC0104 CC0531 CC0984
_______

[G] COG0406 Fructose-2,6-bisphosphatase
  Mac:  MA3008
  Tac:  Ta0625m Ta0823 Ta1347
  Tvo:  TVN0257 TVN0730 TVN0832
  Sso:  SSO2236
  Sce:  YIL107c_3 YJL155c_2 YKR043c YLR345w_2 YNL108c YOR110w YOR283w
  Spo:  SPAC144.17c_2 SPAC1687.21 SPAC222.13c_2 SPAC513.02 SPAC5H10.03 SPAC732.02c_2 SPCC1620.13
  Aae:  aq_1744 aq_1990
  Tma:  TM1374
  Fnu:  FN0808 FN0911
  Dra:  DR0278 DR0602 DR1097 DR1393 DR2144 DR2564 DRA0193
  Cac:  CAC0167 CAC1385 CAC3021
  Cgl:  Cgl0433 Cgl1034 Cgl1286_2 Cgl2186_2 Cgl2299 Cgl2835
  Mtu:  Rv0525 Rv0754_2 Rv2135c Rv2228c_2 Rv2419c Rv2985_2 Rv3214
        Rv3390 Rv3837c
  MtC:  MT0547 MT0778_2 MT2193 MT2287_2 MT2492 MT3063_2 MT3310
        MT3497 MT3945
  Mle:  ML0079 ML0808_1 ML1298 ML1452 ML1637_2 ML1682_2 ML2413
  Lla:  L152977 L174407 L182916 L1889160
  Spy:  SPy0598 SPy1766
  Spn:  SP0022 SP0240 SP0984
  Sau:  SA0361 SAS020
  Lin:  lin0293 lin0517 lin0565 lin0566 lin0907 lin1113 lin1208
  Bsu:  BS_yhfR
  Bha:  BH0285 BH0891 BH1593
  Syn:  sll0395 slr1124 slr1748
  Nos:  all4237 all4906 alr1107 alr2972 alr3338 alr5200
  Eco:  gpmB phpB
  EcZ:  ZgpmB ZphpB
  Ecs:  ECs0676 ECs5353
  Ype:  YPO0455
  Sty:  STM0643 STM4585
  Vch:  VC1240
  Pae:  PA1280 PA1831
  Pmu:  PM0634
  Xfa:  XF1886
  Rso:  RSc0499 RSc2015 RSc2395
  Atu:  AGc1372 AGc517 AGl3572 AGl3573
  Sme:  SMa0527 SMb20250 SMc00006 SMc00413
  Bme:  BMEI1511
  Mlo:  mll2186 mlr0406 mlr7459 mlr7505
  Ccr:  CC0476 CC1351 CC1966
_______

[H] COG0407 Uroporphyrinogen-III decarboxylase
  Mac:  MA0146 MA0779 MA0847 MA0855 MA0859_2 MA1615 MA2163
        MA3613 MA4165 MA4355 MA4379 MA4384_2 MA4558_2 MA4559
  Tac:  Ta0310
  Tvo:  TVN1292
  Sce:  YDR047w
  Spo:  SPCC4B3.05c
  Aae:  aq_334
  Dra:  DR1133
  Cgl:  Cgl0430
  Mtu:  Rv2678c
  MtC:  MT2752
  Mle:  ML1043
  Sau:  SA1652
  Lin:  lin2315
  Bsu:  BS_hemE
  Bha:  BH1202
  Syn:  slr0536
  Nos:  all3909
  Eco:  hemE
  EcZ:  ZhemE
  Ecs:  ECs4920
  Ype:  YPO3734
  Sty:  STM4167
  Vch:  VC0332
  Pae:  PA5034
  Pmu:  PM1734
  Xfa:  XF1332
  Nme:  NMB0781
  NmA:  NMA0991
  Rso:  RSc3303
  Hpy:  HP0604
  jHp:  jhp0551
  Cje:  Cj1243
  Atu:  AGc5140
  Sme:  SMc02794
  Bme:  BMEI0001
  Mlo:  mll4487
  Ccr:  CC3763
  Rpr:  RP885
  Rco:  RC1374
  Ctr:  CT747
  Cpn:  CPn0890
_______

[H] COG0408 Coproporphyrinogen III oxidase
  Sce:  YDR044w
  Spo:  SPAC222.11
  Syn:  sll1185
  Nos:  all0650 all1357
  Eco:  hemF
  EcZ:  ZhemF
  Ecs:  ECs3307
  Ype:  YPO3032
  Sty:  STM2451
  Vch:  VC0055
  Pae:  PA0024
  Xfa:  XF0017
  Rso:  RSc2192
  Atu:  AGc4089
  Sme:  SMc00180
  Bme:  BMEI0467
  Mlo:  mlr2722
  Ccr:  CC0506
  Rpr:  RP882
  Rco:  RC1369
_______

[O] COG0409 Hydrogenase maturation factor
  Afu:  AF1370
  Mac:  MA1139
  Mth:  MTH1072
  Mja:  MJ0993
  Mka:  MK0226
  Pho:  PH0879
  Pab:  PAB1559
  Aae:  aq_1157
  Cac:  CAC0811
  Syn:  slr1498
  Nos:  alr0696
  Eco:  hypD
  EcZ:  ZhypD
  Ecs:  ECs3585
  Sty:  STM2857
  Hpy:  HP0898
  jHp:  jhp0834 jhp0835
  Cje:  Cj0625
_______

[E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
  Afu:  AF0221 AF0822 AF0958 AF1389
  Mja:  MJ1268
  Pya:  PAE1388 PAE2080 PAE2464_2 PAE3269
  Sso:  SSO2838
  Ape:  APE0921 APE1301 APE2526
  Tma:  TM1139
  Fnu:  FN1428
  Dra:  DR0284 DR1034 DR2118 DRA0260 DRA0324
  Cgl:  Cgl0910
  Spn:  SP0753
  Bha:  BH0247
  Syn:  sll0374 slr1881
  Nos:  all1947 all2912 alr2541
  Eco:  livF
  EcZ:  ZlivF
  Ecs:  ECs4301
  Ype:  YPO1155 YPO1191 YPO3804
  Sty:  STM3560
  Pae:  PA1070 PA4862 PA4909
  Rso:  RSc1754 RSc2037 RSc2245 RSc2437 RSc3343 RSp0017 RSp0707
  Cje:  Cj1014c
  Atu:  AGc2605 AGc4373 AGc4396 AGl1457 AGl709 AGpA775 AGpA798
  Sme:  SMb20784 SMb21707 SMc01948 SMc02358 SMc03119
  Bme:  BMEI0261 BMEII0065 BMEII0098 BMEII0119 BMEII0342 BMEII0628 BMEII0873
  Mlo:  mll0756 mll3974 mll4885 mll7175 mll7202 mlr5224 mlr9039
_______

[E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
  Afu:  AF0222 AF0823 AF0959 AF1390
  Mja:  MJ1267
  Pya:  PAE1389 PAE2081 PAE2465 PAE3354
  Sso:  SSO2836
  Ape:  APE0919 APE1308 APE2524
  Tma:  TM1138
  Fnu:  FN1429
  Dra:  DR0283 DR1035 DR2119 DRA0261_2
  Spn:  SP0752
  Syn:  slr0467
  Nos:  all1046 alr2539
  Eco:  livG
  EcZ:  ZlivG
  Ecs:  ECs4302
  Ype:  YPO3805
  Sty:  STM3561
  Pae:  PA1071 PA4910
  Rso:  RSc1753 RSc2246 RSc2438 RSc3344 RSp0016 RSp0706_2
  Cje:  Cj1015c
  Atu:  AGc2606_2 AGc4398 AGl1459 AGl707 AGpA781
  Sme:  SMb20785 SMc01949 SMc02357 SMc03120
  Bme:  BMEI0260_1 BMEII0066 BMEII0099 BMEII0100 BMEII0120_2 BMEII0343 BMEII0629
        BMEII0874_3
  Mlo:  mll3975 mll4886 mll7176 mll7203 mlr5219 mlr9038
_______

[Q] COG0412 Dienelactone hydrolase and related enzymes
  Mac:  MA1571
  Tac:  Ta0228
  Sso:  SSO2087
  Sce:  YAL049c YDL086w
  Spo:  SPAC977.15 SPBC30D10.14
  Aae:  aq_1997
  Mtu:  Rv2054 Rv2765
  MtC:  MT2114 MT2835
  Mle:  ML1444
  Bsu:  BS_yczH
  Syn:  sll1298
  Nos:  all0955 alr1077 alr1362 alr4786
  Eco:  yghY+X ysgA
  EcZ:  Z4353 Z5352
  Ecs:  ECs3884 ECs4760
  Ype:  YPO3787
  Sty:  STM3967 STM4506
  Pae:  PA1166 PA1597 PA2682
  Rso:  RSc0055 RSc0268 RSc2228 RSp1308 RSp1339
  Atu:  AGc1114 AGl2363
  Sme:  SMb20022 SMc00817
  Mlo:  mll1226 mll1495 mll3556 mlr4903
  Ccr:  CC0038 CC0087 CC0477 CC0478 CC2358 CC3758
_______

[H] COG0413 Ketopantoate hydroxymethyltransferase
  Hbs:  VNG1478G
  Pho:  PH0951
  Pab:  PAB0570
  Pya:  PAE3410
  Sso:  SSO2400
  Ape:  APE0676
  Sce:  YBR176w
  Spo:  SPAC5H10.09c
  Aae:  aq_1973
  Tma:  TM1728
  Dra:  DR2615
  Cac:  CAC2914
  Cgl:  Cgl0115
  Mtu:  Rv2225
  MtC:  MT2284
  Mle:  ML1635
  Sau:  SA2392
  Lin:  lin2016
  Bsu:  BS_panB
  Bha:  BH1687
  Syn:  slr0526
  Nos:  all1522
  Eco:  panB
  EcZ:  ZpanB
  Ecs:  ECs0138
  Ype:  YPO3401
  Sty:  STM0182
  Buc:  BU197
  Vch:  VC0592
  Pae:  PA1598 PA4729
  Xfa:  XF0229
  Nme:  NMB0870
  NmA:  NMA1088
  Rso:  RSc2630
  Hpy:  HP1058
  jHp:  jhp0367
  Cje:  Cj0298c
  Atu:  AGl2695
  Sme:  SMb20821 SMc01881
  Bme:  BMEI1592
  Mlo:  mll0197 mll1731 mlr7631
  Ccr:  CC1651
_______

[H] COG0414 Panthothenate synthetase
  Sce:  YIL145c
  Spo:  SPAC5H10.08c
  Aae:  aq_2132
  Tma:  TM1077
  Dra:  DR1164
  Cac:  CAC2915
  Cgl:  Cgl0114 Cgl2632
  Mtu:  Rv3602c
  MtC:  MT3707
  Mle:  ML0230
  Sau:  SA2391
  Lin:  lin2015
  Bsu:  BS_panC
  Bha:  BH1688
  Syn:  sll1249_1
  Nos:  alr2936_1
  Eco:  panC
  EcZ:  ZpanC
  Ecs:  ECs0137
  Ype:  YPO3402
  Sty:  STM0181
  Buc:  BU196
  Vch:  VC0591
  Pae:  PA4730
  Xfa:  XF0230
  Nme:  NMB0871
  NmA:  NMA1089
  Rso:  RSc2387
  Hpy:  HP0006
  jHp:  jhp0006
  Cje:  Cj0297c
  Atu:  AGl2698
  Sme:  SMc01880
  Bme:  BMEI1593
  Mlo:  mll0196
  Ccr:  CC2166
_______

[L] COG0415 Deoxyribodipyrimidine photolyase
  Hbs:  VNG1335G VNG1754G
  Mac:  MA4066
  Mth:  MTH904
  Sso:  SSO2472
  Sce:  YOR386w
  Cgl:  Cgl0613
  Spy:  SPy1505
  Sau:  SA0646
  Lin:  lin0597
  Syn:  sll1629 slr0854
  Nos:  alr2725 alr2966
  Eco:  phrB
  EcZ:  ZphrB
  Ecs:  ECs0733
  Ype:  YPO2695
  Sty:  STM0709
  Buc:  BU300
  Vch:  VC1392 VC1814 VCA0057
  Pae:  PA4660
  NmA:  NMA2198
  Atu:  AGc2249
  Mlo:  mll8094
  Ccr:  CC1428
_______

[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme
  Aae:  aq_1101
  Tma:  TM0149
  Fnu:  FN0147
  Dra:  DR1996
  Cac:  CAC1746
  Lla:  L71174
  Spy:  SPy0022
  Spn:  SP0037
  Sau:  SA1072
  Lin:  lin1923
  Bsu:  BS_plsX
  Bha:  BH2493
  Syn:  slr1510
  Nos:  alr0238
  Eco:  plsX
  EcZ:  ZplsX
  Ecs:  ECs1468
  Ype:  YPO1596
  Sty:  STM1192
  Vch:  VC2024
  Pae:  PA2969
  Pmu:  PM1913
  Nme:  NMB1913
  NmA:  NMA0542
  Rso:  RSc1049
  Hpy:  HP0201
  jHp:  jhp0187
  Cje:  Cj0329c
  Atu:  AGc2176
  Sme:  SMc01784
  Bme:  BMEI1181
  Mlo:  mlr8423
  Ccr:  CC1368
  Ctr:  CT811
  Cpn:  CPn0962
  Uur:  UU206
  Mpu:  MYPU_1620
  Mpn:  MPN546
  Mge:  MG368
_______

[L] COG0417 DNA polymerase elongation subunit (family B)
  Afu:  AF0497 AF0693m
  Hbs:  VNG0521G VNG6362G
  Mac:  MA0885
  Mth:  MTH1208 MTH208
  Mja:  MJ0885_1 MJ0885_3 MJ0885_5
  Mka:  MK1039
  Tac:  Ta0450 Ta0907
  Tvo:  TVN0660 TVN0823 TVN1045
  Pho:  PH1947_1 PH1947_3
  Pab:  PAB1128
  Pya:  PAE1113 PAE2109 PAE2180
  Sso:  SSO0081 SSO0552 SSO1459
  Ape:  APE0099 APE2098 APE2229
  Sce:  YDL102w YNL102w YNL262w YPL167c
  Spo:  SPAC3H5.06c SPAC688.10 SPBC25H2.13c SPBC336.04
  Ecu:  ECU05g0990 ECU09g0430 ECU10g1210
  Nos:  alr7572
  Eco:  polB
  EcZ:  ZpolB
  Ecs:  ECs0064
  Ype:  YPO0518
  Sty:  STM0097
  Vch:  VC1212
  Pae:  PA1886
_______

[F] COG0418 Dihydroorotase
  Sce:  YLR420w
  Spo:  SPAC16.03c
  Syn:  slr0406
  Eco:  pyrC
  EcZ:  ZpyrC
  Ecs:  ECs1440
  Ype:  YPO1587
  Sty:  STM1163
  Buc:  BU334
  Vch:  VCA0925
  Pae:  PA3527
  Nme:  NMB0682
  NmA:  NMA0884
  Rso:  RSc0487
  Hpy:  HP0581
  jHp:  jhp0528
  Cje:  Cj0259
  Atu:  AGc703
  Sme:  SMc02166
_______

[L] COG0419 ATPase involved in DNA repair
  Afu:  AF1032
  Hbs:  VNG0514C
  Mac:  MA1164
  Mth:  MTH540
  Mja:  MJ1322
  Mka:  MK0690
  Tac:  Ta0157
  Tvo:  TVN0227
  Pho:  PH0929
  Pab:  PAB0812
  Pya:  PAE2280 PAE2905
  Sso:  SSO2249
  Ape:  APE0110
  Sce:  YNL250w
  Spo:  SPAC1556.01c SPAP4C9.01c
  Ecu:  ECU07g0610i
  Aae:  aq_1006
  Tma:  TM1636
  Fnu:  FN0450 FN0522
  Dra:  DR1922
  Cac:  CAC2736
  Lla:  L152588
  Sau:  SA1181
  Lin:  lin1686
  Bsu:  BS_yirY
  Syn:  slr1048
  Nos:  alr3988 alr4911 alr4919
  Eco:  sbcC
  EcZ:  ZsbcC
  Ecs:  ECs0447
  Ype:  YPMT1.40c
  Sty:  STM0395
  Vch:  VCA0521
  Pae:  PA4282
  Tpa:  TP0627
  Bbu:  BB0830
_______

[L] COG0420 DNA repair exonuclease
  Afu:  AF1031
  Hbs:  VNG0512G
  Mac:  MA1163 MA2363
  Mth:  MTH541_2
  Mja:  MJ1323
  Mka:  MK0691
  Tac:  Ta0158
  Tvo:  TVN0228
  Pho:  PH0930
  Pab:  PAB0811
  Pya:  PAE2904
  Sso:  SSO2250
  Ape:  APE0113
  Sce:  YMR224c
  Spo:  SPAC13C5.07
  Ecu:  ECU05g1280
  Aae:  aq_1886
  Tma:  TM1635
  Fnu:  FN0523
  Dra:  DR1921
  Cac:  CAC2737
  Cgl:  Cgl1140
  Mtu:  Rv1277
  MtC:  MT1314
  Mle:  ML1119
  Lla:  L0327
  Sau:  SA1180 SA1662
  Lin:  lin1687 lin2325
  Bsu:  BS_sbcD BS_yhaO
  Bha:  BH2382
  Syn:  sll0021
  Nos:  all4463
  Eco:  sbcD
  EcZ:  ZsbcD
  Ecs:  ECs0448
  Ype:  YPMT1.41c YPO3206
  Sty:  STM0396
  Vch:  VCA0520
  Pae:  PA4281
  Sme:  SMc01909
  Tpa:  TP0626
  Bbu:  BB0829
_______

[E] COG0421 Spermidine synthase
  Afu:  AF2334
  Mja:  MJ0313
  Mka:  MK0961
  Tac:  Ta0355
  Tvo:  TVN0417
  Pho:  PH0211
  Pab:  PAB2221
  Pya:  PAE1203
  Sso:  SSO0757
  Ape:  APE0767
  Sce:  YLR146c YPR069c
  Spo:  SPBC12C2.07c
  Aae:  aq_062
  Tma:  TM0654
  Dra:  DR1052
  Cac:  CAC2602
  Cgl:  Cgl1208
  Spn:  SP0918
  Bsu:  BS_ywhF
  Bha:  BH1914 BH3811
  Eco:  speE
  EcZ:  ZspeE
  Ecs:  ECs0125
  Ype:  YPO3411
  Sty:  STM0166
  Buc:  BU209
  Pae:  PA1687 PA2842 PA4774
  Xfa:  XF0143
  Nme:  NMB0240_2 NMB0869
  NmA:  NMA0020_2 NMA1087
  Rso:  RSc0995 RSp0825
  Hpy:  HP0832
  jHp:  jhp0771
  Mlo:  mlr3555
_______

[H] COG0422 Thiamine biosynthesis protein ThiC
  Afu:  AF2412
  Hbs:  VNG0715G
  Mac:  MA0261 MA1790 MA4329
  Mth:  MTH1543 MTH1576
  Mja:  MJ1026
  Mka:  MK0106
  Pab:  PAB1930
  Pya:  PAE0333
  Sso:  SSO1324 SSO1941
  Aae:  aq_1204
  Tma:  TM0788
  Fnu:  FN1757
  Dra:  DRA0175
  Cac:  CAC3014
  Cgl:  Cgl1275
  Mtu:  Rv0423c
  MtC:  MT0437
  Mle:  ML0294
  Bsu:  BS_thiA
  Bha:  BH1933
  Syn:  slr0118
  Nos:  all0982
  Eco:  thiC
  EcZ:  ZthiC
  Ecs:  ECs4917
  Ype:  YPO3739
  Sty:  STM4164
  Vch:  VC0061
  Pae:  PA4973
  Xfa:  XF1888
  Nme:  NMB2040
  NmA:  NMA0397
  Rso:  RSc0113
  Cje:  Cj0453
  Atu:  AGc4656
  Sme:  SMb20615
  Mlo:  mll5795
  Ccr:  CC2029
_______

[J] COG0423 Glycyl-tRNA synthetase (class II)
  Afu:  AF0916
  Hbs:  VNG2352G
  Mac:  MA0097
  Mth:  MTH1846
  Mja:  MJ0228
  Mka:  MK0152
  Tac:  Ta0206
  Tvo:  TVN1388
  Pho:  PH1614
  Pab:  PAB0380
  Pya:  PAE2266
  Sso:  SSO0444
  Ape:  APE1639
  Sce:  YBR121c YPR081c
  Spo:  SPAC3F10.03
  Ecu:  ECU10g1790
  Dra:  DR2059
  Cac:  CAC3195
  Cgl:  Cgl2226
  Mtu:  Rv2357c
  MtC:  MT2426
  Mle:  ML0826
  Sau:  SA1394
  Tpa:  TP0672
  Bbu:  BB0371
  Uur:  UU493
  Mpu:  MYPU_4510
  Mpn:  MPN354
  Mge:  MG251
_______

[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
  Mac:  MA0748
  Pho:  PH1941
  Pab:  PAB1125
  Sce:  YOR111w
  Spo:  SPAC3G6.03c
  Aae:  aq_1718
  Tma:  TM1556
  Fnu:  FN0759
  Dra:  DR1206
  Cac:  CAC1240
  Cgl:  Cgl0685
  Mtu:  Rv3282
  MtC:  MT3381
  Mle:  ML0729
  Bsu:  BS_maf
  Bha:  BH3033
  Syn:  sll0905
  Nos:  all3075
  Eco:  yceF yhdE
  EcZ:  ZyceF ZyhdE
  Ecs:  ECs1465 ECs4120
  Ype:  YPO1593 YPO3668
  Sty:  STM1189 STM3371
  Vch:  VC0418 VC2027
  Pae:  PA2972 PA4478
  Pmu:  PM1268
  Xfa:  XF1124
  Nme:  NMB0598 NMB1909
  NmA:  NMA0546 NMA0802
  Rso:  RSc1046 RSc2196
  Hpy:  HP1240
  jHp:  jhp1161
  Cje:  Cj0507
  Atu:  AGc2 AGc943
  Sme:  SMc02311 SMc02792
  Bme:  BMEI1672 BMEI2059
  Mlo:  mll6452 mlr4491
  Ccr:  CC0002 CC2342
  Rpr:  RP815
  Rco:  RC1266
  Ctr:  CT349
  Cpn:  CPn0022
_______

[O] COG0425 Predicted redox protein, regulator of disulfide bond formation
  Afu:  AF0165 AF0188 AF0554 AF0556
  Hbs:  VNG6059C VNG6467C VNG7042 VNG7167
  Mac:  MA0810
  Mth:  MTH1417_1
  Mja:  MJ0760_1 MJ0990
  Mka:  MK0257 MK0357_1
  Tac:  Ta1170 Ta1414
  Tvo:  TVN1248 TVN1433
  Pya:  PAE2056 PAE2601 PAE2602 PAE2633 PAE2711a
  Sso:  SSO10788 SSO11939 SSO3088 SSO7239 SSO8861 SSO9500
  Aae:  aq_1421
  Tma:  TM0978_2 TM0983
  Fnu:  FN1903_3
  Sau:  SA0044_2 SA0082_2 SA1849
  Bsu:  BS_yrkF_1 BS_yrkI
  Syn:  ssl1707
  Nos:  asr2448
  Eco:  sirA yedF yeeD
  EcZ:  ZyedF ZyeeD ZyhhP
  Ecs:  ECs2669 ECs2814 ECs4319
  Ype:  YPO0275 YPO3821
  Sty:  STM1966 STM3578
  Buc:  BU447
  Vch:  VC0024 VC2163
  Pae:  PA1006 PA1564 PA3632
  Hin:  HI0242 HI0721
  Pmu:  PM1496
  Nme:  NMB0681
  NmA:  NMA0882
  Rso:  RSc0810
  Cje:  Cj1501 Cj1505c_1
  Atu:  AGl2391
  Sme:  SMc00688
  Bme:  BMEI0037
  Mlo:  msr3579
  Ccr:  CC1839
_______

[C] COG0426 Uncharacterized flavoproteins
  Afu:  AF0167 AF1520
  Mac:  MA1799 MA3381 MA3743
  Mth:  MTH1350 MTH157 MTH220
  Mja:  MJ0534 MJ0732 MJ0748
  Pho:  PH1085 PH1971
  Pab:  PAB0596 PAB1188
  Aae:  aq_990
  Tma:  TM0013 TM0755
  Fnu:  FN0512 FN1423
  Cac:  CAC1027 CAC1498 CAC2449
  Syn:  sll0217_1 sll0219_1 sll0550_1 sll1521_1
  Nos:  all0177_1 all0178_1 all3891_1 all3895_1 all4444_1 all4446_1
  Eco:  ygaK_1
  EcZ:  Z4018_1
  Ecs:  ECs3566_1
  Sty:  STM2840_1
  Pae:  PA4348
  Rso:  RSc2212
_______

[C] COG0427 Acetyl-CoA hydrolase
  Afu:  AF1145 AF1854
  Hbs:  VNG2291G
  Sce:  YBL015w
  Spo:  SPAC1952.09c
  Fnu:  FN0621
  Cgl:  Cgl0494 Cgl2515
  Syn:  slr1888_1
  Eco:  ygfH
  EcZ:  ZygfH
  Ecs:  ECs3790
  Ype:  YPO1926
  Sty:  STM3118
  Pae:  PA5299 PA5445
  Atu:  AGc695
  Bme:  BMEI0928
  Ccr:  CC3724
_______

[P] COG0428 Predicted divalent heavy-metal cations transporter
  Hbs:  VNG0938G VNG1744H
  Mac:  MA0387 MA2881
  Mth:  MTH473
  Mja:  MJ1036
  Pho:  PH0632
  Pab:  PAB1443
  Pya:  PAE0600 PAE2630 PAE3636
  Sso:  SSO3073
  Ape:  APE0203 APE1691
  Sce:  YIL023c YKL175w
  Spo:  SPAP8A3.03 SPCC126.09
  Ecu:  ECU09g0740
  Aae:  aq_1814
  Tma:  TM1738
  Dra:  DR1032
  Cgl:  Cgl1400
  Mtu:  Rv0318c
  MtC:  MT0333
  Lin:  lin0435
  Nos:  all0473
  Eco:  ygiE
  EcZ:  ZygiE
  Ecs:  ECs3928
  Sty:  STM3190
  Pae:  PA4467
  Nme:  NMB0175
  NmA:  NMA0093
  Rso:  RSc2227
  Cje:  Cj0263
  Sme:  SMb20011
  Bbu:  BB0219
_______

[R] COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold
  Sce:  YBR177c YMR210w YPL095c
  Ecu:  ECU07g0900
  Syn:  slr0264
  Nos:  alr0130
  Eco:  yheT
  EcZ:  ZyheT
  Ecs:  ECs4204
  Ype:  YPO0180
  Sty:  STM3462
  Vch:  VC2610
  Pae:  PA0368
  Nme:  NMB0276
  NmA:  NMA2211
  Rso:  RSc0563
_______

[A] COG0430 RNA 3'-terminal phosphate cyclase
  Afu:  AF1435
  Hbs:  VNG0732G
  Mac:  MA4637
  Mth:  MTH1915
  Mja:  MJ0025
  Mka:  MK0001
  Pho:  PH1529
  Pab:  PAB1943
  Pya:  PAE3596
  Sso:  SSO2446
  Ape:  APE0511
  Sce:  YOL010w
  Spo:  SPAC12G12.06c
  Ecu:  ECU06g1030
  Aae:  aq_642
  Nos:  alr1901
  Eco:  yhgK+J
  EcZ:  Z4778
  Ecs:  ECs4263
  Sty:  STM3518
  Pae:  PA4585
  Rso:  RSc0226
_______

[R] COG0431 Predicted flavoprotein
  Hbs:  VNG1618H
  Sce:  YLR011w
  Spo:  SPCC4B3.06c
  Dra:  DR0624 DR0962
  Cgl:  Cgl0985 Cgl1606 Cgl2851
  Mtu:  Rv3054c
  MtC:  MT3140
  Lla:  L171116
  Spy:  SPy1959
  Spn:  SP1471 SP1472_1 SP1546
  Sau:  SA0328 SA0518
  Lin:  lin2445
  Bsu:  BS_yhdA
  Bha:  BH2050 BH3321
  Syn:  slr0945
  Nos:  alr4777
  Eco:  ycbP yieF
  EcZ:  ZycbP ZyieF
  Ecs:  ECs1020 ECs4650
  Ype:  YPO3623
  Sty:  STM3850
  Vch:  VC2111
  Pae:  PA1204 PA2280 PA2357 PA3446
  Pmu:  PM1472
  Nme:  NMB1796
  NmA:  NMA0666
  Rso:  RSc1337 RSp1495
  Atu:  AGc2746 AGpA462 AGpA786
  Sme:  SMb20573 SMc00183 SMc01960 SMc02650
  Mlo:  mll2599 mll4710 mll4752 mll5191 mlr0414 mlr4323 mlr5227
  Ccr:  CC1506 CC1536
  Mpn:  MPN517
  Mge:  MG342
_______

[S] COG0432 Uncharacterized conserved protein
  Afu:  AF0741 AF2050
  Mac:  MA2324 MA3192
  Mth:  MTH771
  Mja:  MJ1081
  Mka:  MK0814
  Pho:  PH0581 PH0713
  Pab:  PAB0878 PAB0941
  Pya:  PAE1017
  Sso:  SSO2532
  Ape:  APE1520
  Spo:  SPAC4A8.02c
  Aae:  aq_1965 aq_2013
  Tma:  TM0723 TM1872
  Dra:  DR2598
  Cac:  CAC0907
  Mtu:  Rv2556c
  MtC:  MT2633
  Bsu:  BS_yugU
  Bha:  BH3498
  Syn:  sll1880
  Nos:  alr1040 alr3214
  Eco:  yjbQ
  EcZ:  ZyjbQ
  Ecs:  ECs5038
  Sty:  STM4250
  Vch:  VC0373
  Pae:  PA5286
  Atu:  AGc3925
  Sme:  SMc01559
_______

[R] COG0433 Predicted ATPase
  Afu:  AF1030 AF1060
  Hbs:  VNG1896C VNG6143H
  Mac:  MA0204 MA0709
  Mth:  MTH307 MTH541_1 MTH542
  Mja:  MJ1429 MJ1565 MJECL08
  Mka:  MK0692
  Tac:  Ta0159 Ta0591 Ta1216
  Tvo:  TVN0229 TVN0379 TVN0639
  Pho:  PH0932
  Pab:  PAB0810
  Pya:  PAE0128 PAE0245 PAE2155 PAE2903 PAE2998 PAE3204 PAE3527
  Sso:  SSO0152 SSO0283 SSO0395 SSO0469 SSO1327 SSO2200 SSO2251
        SSO2285
  Ape:  APE0080 APE0107 APE0219 APE2093
  Aae:  aq_1682 aq_1852 aq_aa29 aq_aa31
  Tma:  TM1257
  Dra:  DR0837
  Mtu:  Rv2510c
  MtC:  MT2585
  Spy:  SPy0500
  Bha:  BH0052
  Syn:  sll0284
  Nos:  alr3799
  Eco:  yjgR
  EcZ:  ZyjgR
  Ecs:  ECs5240
  Ype:  YPO0168
  Pae:  PA4308
  Pmu:  PM1435
  Rso:  RSc2189
  Atu:  AGc1573 AGc3416 AGc3693
  Sme:  SMc00100 SMc00484 SMc01432
  Bme:  BMEI0482 BMEI1370
  Mlo:  mll1902 mlr1445 mlr7622
  Ccr:  CC0090
_______

[R] COG0434 Predicted TIM-barrel enzyme
  Afu:  AF0419
  Hbs:  VNG2518C
  Mja:  MJ1115
  Mka:  MK1463
  Pho:  PH1209
  Pab:  PAB1665
  Pya:  PAE3553
  Ape:  APE2448
  Syn:  sll0634
  Nos:  all1221
  Eco:  sgcQ
  Sty:  STM1615
  Atu:  AGl1705GM
  Mlo:  mll7660
_______

[O] COG0435 Predicted glutathione S-transferase
  Hbs:  VNG2281C
  Sce:  YGR154c YKR076w YMR251w
  Spo:  SPCC1281.07c
  Cgl:  Cgl1235
  Syn:  slr0605
  Nos:  alr4046
  Eco:  yqjG
  EcZ:  ZyqjG
  Ecs:  ECs3984
  Sty:  STM3233
  Vch:  VC1096
  Pae:  PA2610
  Atu:  AGc4109
  Sme:  SMc02708
  Bme:  BMEI0455
  Mlo:  mll2799
_______

[E] COG0436 Aspartate/tyrosine/aromatic aminotransferase
  Afu:  AF0409 AF1623 AF2129 AF2366
  Hbs:  VNG0502G VNG0629G VNG0981C VNG1121G
  Mac:  MA0636 MA0925 MA1385 MA1712 MA1819
  Mth:  MTH1694 MTH1894 MTH52
  Mja:  MJ0001 MJ0684 MJ1391 MJ1479
  Mka:  MK1024
  Tac:  Ta0529m Ta0765 Ta1078
  Tvo:  TVN0496 TVN0848 TVN1005
  Pho:  PH0771 PH1322 PH1371
  Pab:  PAB0525 PAB1523 PAB1810
  Pya:  PAE1964 PAE2251 PAE3645
  Sso:  SSO0897 SSO1177
  Ape:  APE0674 APE2248 APE2575
  Sce:  YDR111c YJL060w YLR089c
  Spo:  SPAC6B12.04c SPBC582.08
  Aae:  aq_1969 aq_2094 aq_273 aq_421
  Tma:  TM1255 TM1698
  Fnu:  FN0605 FN1152
  Dra:  DR0623 DR0671 DR2268
  Cac:  CAC0375 CAC1001 CAC1715 CAC1819 CAC2380 CAC2832
  Cgl:  Cgl0791 Cgl1079 Cgl2547 Cgl2785
  Mtu:  Rv0337c Rv0858c Rv1178 Rv3565
  MtC:  MT0351 MT0881 MT1215
  Mle:  ML1488 ML2502
  Lla:  L0098 L162604 L56488 L91456
  Spy:  SPy0650 SPy1779
  Spn:  SP0035 SP1544 SP1994
  Sau:  SA0902 SA1749 SA2347
  Lin:  lin0314 lin1005 lin2011 lin2354
  Bsu:  BS_aspB BS_patA BS_yhdR BS_ykrV BS_yugH BS_ywfG
  Bha:  BH0936 BH1060 BH1695 BH2195 BH3350
  Syn:  sll0006 sll0402 sll0480 sll0938 slr0036
  Nos:  all2340 all4327 alr1039 alr2765 alr4853 alr5103
  Eco:  ybdL yfbQ yfdZ
  EcZ:  Z3551 Z3644 ZybdL
  Ecs:  ECs0639 ECs3174 ECs3259
  Ype:  YPO0623 YPO2558 YPO2975
  Sty:  STM0603 STM2331 STM2402
  Vch:  VC1977
  Pae:  PA2828 PA3659 PA3798 PA4715 PA4722 PA4976
  Hin:  HI0286
  Pmu:  PM0052
  Xfa:  XF2396
  Nme:  NMB0894 NMB1473
  NmA:  NMA1113 NMA1684
  Rso:  RSc0710 RSc1096 RSc1326 RSc1394 RSc2011 RSp0698 RSp0794
        RSp0943 RSp1232
  Hpy:  HP0624 HP0672
  jHp:  jhp0568 jhp0615
  Cje:  Cj0150c Cj0762c
  Atu:  AGc2460 AGc2921 AGc3991 AGc935 AGl1171
  Sme:  SMc00294 SMc01340 SMc01578 SMc01969 SMc02251 SMc02262 SMc04326
        SMc04386
  Bme:  BMEI0516 BMEI0724 BMEI1058
  Mlo:  mll0935 mlr0210 mlr1282 mlr2541 mlr2987 mlr4213 mlr5693
        mlr5883 mlr9116 mlr9118
  Ccr:  CC0738 CC1382 CC1534 CC2455
  Rpr:  RP091
  Rco:  RC0120
  Ctr:  CT390
  Cpn:  CPn0495
  Tpa:  TP0223
_______

[C] COG0437 Fe-S-cluster-containing hydrogenase components 1
  Afu:  AF0076 AF0157 AF0175 AF0499 AF1202 AF2385
  Hbs:  VNG0830G
  Mac:  MA2963
  Pab:  PAB1390
  Pya:  PAE1263 PAE2661 PAE2837 PAE2860
  Sso:  SSO1579 SSO2759 SSO2794
  Ape:  APE2605
  Aae:  aq_067 aq_1046 aq_1232
  Eco:  dmsB fdnH fdoH hybA nrfC ydhX ydhY
        ynfG
  EcZ:  Z2577 Z2698 Z2702 Z3784 ZdmsB ZfdnH ZfdoH
        ZhybA ZnrfC
  Ecs:  ECs0980 ECs2079 ECs2295 ECs2378 ECs2381 ECs3383 ECs3881
        ECs4819 ECs5054
  Ype:  YPO2966 YPO3324 YPO4057
  Sty:  STM0612 STM0965 STM1385 STM1497 STM1569 STM2064 STM2529
        STM3149 STM4036 STM4279 STM4306
  Vch:  VC1512
  Pae:  PA4811
  Hin:  HI0007 HI1046 HI1067
  Pmu:  PM0025 PM0407 PM0723 PM1755
  Rso:  RSc2372
  Cje:  Cj1510c
  Sme:  SMa0005
  Mlo:  mll5613
_______

[M] COG0438 Glycosyltransferase
  Afu:  AF0038 AF0043 AF0045 AF0327 AF0602 AF0606 AF0607
        AF0617 AF1728
  Hbs:  VNG0051G VNG0060G VNG0062G VNG0410G VNG0598C VNG0600C VNG1017H
        VNG1059C
  Mac:  MA0798 MA1061 MA1062 MA1175 MA1179 MA1180 MA1183
        MA1186 MA2173 MA2175 MA2178 MA2181 MA2345 MA2381_1
        MA2383 MA3679 MA3682 MA3755 MA3756 MA3757 MA4452
  Mth:  MTH138 MTH173 MTH332 MTH335 MTH338 MTH362 MTH363
        MTH370 MTH376 MTH450
  Mja:  MJ1059 MJ1069 MJ1178 MJ1607
  Mka:  MK1083 MK1306
  Tac:  Ta0340 Ta0695_2 Ta0696 Ta0701 Ta0702 Ta0707 Ta0712
        Ta0714m_2 Ta1067
  Tvo:  TVN0430 TVN0522 TVN0863_2 TVN0864 TVN0872 TVN0877 TVN0880
        TVN0891
  Pho:  PH0426 PH0432 PH0434 PH1035 PH1844
  Pab:  PAB0827 PAB0973 PAB1301 PAB1410 PAB1588 PAB1604 PAB1606
  Pya:  PAE0430 PAE0431 PAE0440 PAE0442 PAE0467 PAE0540 PAE0541
        PAE0542 PAE0543 PAE1273 PAE1278
  Sso:  SSO0388 SSO0681 SSO0791 SSO0819 SSO0822 SSO1614 SSO1618
        SSO1619 SSO1620 SSO1621 SSO1622 SSO1626 SSO1785 SSO2609
        SSO2755 SSO2775 SSO2900 SSO2983
  Ape:  APE1186 APE1188 APE1191 APE2066
  Sce:  YBR110w YFR015c YGL065c YLR258w YNL048w YPL175w
  Spo:  SPAC23C4.14 SPBC32H8.14 SPBC3D6.07 SPCC330.08
  Ecu:  ECU09g1210
  Aae:  aq_1080 aq_1096 aq_1141 aq_1641 aq_2115 aq_515 aq_516
        aq_572
  Tma:  TM0359 TM0392 TM0609 TM0619 TM0622 TM0624 TM0627
        TM0628 TM0631 TM0744 TM0756_2 TM0760 TM1230 TM1405
        TM1411_1
  Fnu:  FN0383 FN0393_1 FN1245
  Dra:  DR0444 DR0713 DR0866 DR1225 DR1555 DRA0039 DRA0040
        DRA0368
  Cac:  CAC0734 CAC1053 CAC2313 CAC2405 CAC2536 CAC2907 CAC2911
        CAC3015 CAC3049 CAC3051 CAC3052 CAC3057 CAC3066 CAC3068
        CAC3070 CAC3071 CAC3311 CAC3594
  Cgl:  Cgl0349 Cgl0396 Cgl0462 Cgl1093 Cgl1627 Cgl2138 Cgl2800
  Mtu:  Rv0225 Rv0486 Rv0557 Rv1212c Rv2188c Rv2610c Rv3032
  MtC:  MT0235 MT0504 MT0583 MT1250 MT1800 MT2243 MT2685
        MT3116
  Mle:  ML0452 ML0886 ML1715 ML2443 ML2583
  Lla:  L1389 L14736 L148651 L189090 L190226 L76469 L78550
  Spy:  SPy0515 SPy0516 SPy0786
  Spn:  SP0135 SP0351 SP0353 SP1075 SP1076 SP1366 SP1758
  Sau:  SA0125 SA0152 SA0155 SA0522 SA0523 SA1291 SA2441
  Lin:  lin2699 lin2700
  Bsu:  BS_tagE BS_tuaC BS_tuaH BS_ypjH BS_yqgM BS_ytcC BS_ytxN
        BS_yveN BS_yveP
  Bha:  BH1415_2 BH1683 BH2305 BH2688 BH3376 BH3380 BH3382
        BH3657_2 BH3658_2 BH3662 BH3663 BH3712
  Syn:  sll0045_1 sll0071 sll0380 sll1231 sll1466 sll1527 sll1528_1
        sll1534 sll1723 sll1724 sll1971 slr0344 slr0384 slr1064
        slr1066 slr1073 slr1076 slr1077 slr1085 slr1166 slr1508
        slr2118
  Nos:  all0160 all0919 all1059 all1345 all2037 all2291 all2292
        all2507 all2549 all2720 all4376 all4423 all4426 all4436
        all4437 all4830 all4985 all5194 all5195 all5341 alr0159
        alr0582 alr0584 alr1000 alr1117 alr1668 alr2265 alr2832
        alr2839 alr2860 alr2863 alr2864 alr2867 alr3057 alr3058
        alr3064 alr3069 alr3370 alr3425 alr3698 alr3699 alr4168
        alr4178 alr4494 alr5201 alr5202 alr5223 alr5235 alr5237
        alr5238 alr5239 alr5307
  Eco:  rfaB rfaG wbbK wcaC wcaI wcaL
  EcZ:  ZrfaG ZwaaD ZwbdP ZwcaC ZwcaI ZwcaL
  Ecs:  ECs2840 ECs2849 ECs2855 ECs2862 ECs4501 ECs4506
  Ype:  YPO3104 YPO3107
  Sty:  STM0721 STM2086 STM2100 STM2106 STM2113 STM3714 STM3719
        STM3722
  Vch:  VC0239_1 VC0259 VC0920 VC0925
  Pae:  PA0842 PA1385 PA1389 PA1391 PA2236 PA2238 PA2239
        PA3059 PA3147 PA3149 PA4311 PA5004 PA5010 PA5447
        PA5448 PA5449 PA5455 PA5456
  Hin:  HI1698
  Pmu:  PM1006 PM1010 PM1138
  Xfa:  XF0102 XF0608 XF0879 XF0885 XF0887 XF1470 XF2364
  Nme:  NMB0218 NMB0846 NMB1705
  NmA:  NMA0048 NMA0640 NMA1057 NMA1058 NMA1959
  Rso:  RSc2084 RSc2271 RSp1009 RSp1013
  Hpy:  HP0421
  jHp:  jhp0963
  Cje:  Cj1125c Cj1127c Cj1129c Cj1432c_1
  Atu:  AGc1178 AGc2281 AGc3967 AGc4173 AGc4679 AGc4695 AGl147
        AGl2541 AGl2543 AGl2546 AGl2563 AGl2569 AGl3095 AGl33GM
        AGl34GM AGl35GM AGl534gl_2
  Sme:  SMb20117 SMb20243 SMb21053 SMb21075 SMb21076 SMb21078 SMb21230
        SMb21231 SMb21242 SMb21250 SMb21252 SMb21265 SMb21308 SMb21311
        SMb21318 SMb21320_2 SMb21502 SMb21503 SMb21581 SMc01219 SMc01220
        SMc01221 SMc01790 SMc01793
  Bme:  BMEI0509 BMEI0997 BMEI0998 BMEI1393 BMEI1404 BMEII0835 BMEII0845
        BMEII0846 BMEII0847 BMEII1129
  Mlo:  mll0693 mll2084 mll3259 mll4797 mll5238 mll7087 mll8436
        mlr1806 mlr2085 mlr2668 mlr3249 mlr5268 mlr6501 mlr6753
        mlr8126
  Ccr:  CC0755 CC0756 CC1013 CC1014 CC1016 CC1052 CC1958
        CC3173 CC3345
  Rpr:  RP336 RP340 RP344 RP414
  Rco:  RC0465 RC0575
  Bbu:  BB0454
_______

[I] COG0439 Biotin carboxylase
  Afu:  AF0220
  Mac:  MA0675
  Mth:  MTH1917
  Mja:  MJ1229
  Sso:  SSO2466
  Sce:  YBR208c_2 YMR207c_1 YNR016c_1
  Spo:  SPAC56E4.04c_1
  Aae:  aq_1470 aq_1517 aq_1664
  Dra:  DR0117 DRA0310_1
  Cac:  CAC3570
  Mtu:  Rv0973c_1 Rv1722
  MtC:  MT1001_1 MT1763
  Lla:  L0189
  Spy:  SPy0560 SPy1745
  Spn:  SP0425
  Sau:  SA1357 SA1434
  Lin:  lin1394
  Bsu:  BS_accC BS_yngH BS_ywfE
  Bha:  BH1132 BH2787
  Syn:  sll0053
  Nos:  alr0939
  Eco:  accC
  EcZ:  ZaccC
  Ecs:  ECs4128
  Ype:  YPO3658 YPO4021
  Sty:  STM3380
  Vch:  VC0295
  Pae:  PA0494 PA1400_1 PA4848 PA5436
  Hin:  HI0972
  Pmu:  PM1091
  Xfa:  XF0049
  Nme:  NMB1861
  NmA:  NMA0596
  Rso:  RSc2787 RSp0940 RSp1486
  Hpy:  HP0370
  jHp:  jhp1011
  Cje:  Cj1037c Cj1290c
  Atu:  AGc2451 AGl1177
  Sme:  SMc01345
  Bme:  BMEI1063
  Mlo:  mll0203 mll5963 mll6062 mll9226_1 mlr6296
  Ccr:  CC1829_1 CC1884 CC3214_1
  Ctr:  CT124
  Cpn:  CPn0182
  Tpa:  TP0695
_______

[E] COG0440 Acetolactate synthase, small (regulatory) subunit
  Afu:  AF1719
  Mac:  MA3791
  Mth:  MTH1443
  Mja:  MJ0161
  Mka:  MK0545
  Pho:  PH1221
  Pab:  PAB0691
  Ape:  APE0381m
  Sce:  YCL009c
  Spo:  SPBC14C8.04
  Aae:  aq_1851
  Tma:  TM0549
  Dra:  DR1517
  Cac:  CAC3176
  Cgl:  Cgl1242
  Mtu:  Rv3002c
  MtC:  MT3082
  Mle:  ML1695
  Lla:  L0079
  Spn:  SP0446
  Sau:  SA1860
  Lin:  lin2092
  Bsu:  BS_ilvN
  Bha:  BH3060
  Syn:  sll0065
  Nos:  alr4627
  Eco:  ilvH ilvN
  EcZ:  ZilvH ZilvN
  Ecs:  ECs0082 ECs4611
  Ype:  YPO0540 YPO2294
  Sty:  STM0117 STM3795
  Buc:  BU225
  Vch:  VC2482
  Pae:  PA4695
  Hin:  HI1584
  Pmu:  PM0869
  Nme:  NMB1576
  NmA:  NMA1765
  Rso:  RSc2076
  Cje:  Cj0575
  Atu:  AGc3688
  Sme:  SMc01430
  Bme:  BMEI0618
  Mlo:  mll1432
  Ccr:  CC2101
_______

[J] COG0441 Threonyl-tRNA synthetase
  Afu:  AF0548
  Hbs:  VNG1835G
  Mac:  MA2896
  Mth:  MTH1455
  Mja:  MJ1197
  Mka:  MK0544
  Tac:  Ta0330
  Tvo:  TVN1282
  Pho:  PH0699
  Pab:  PAB1490
  Pya:  PAE1748
  Sso:  SSO0384 SSO2486
  Ape:  APE0117 APE0809
  Sce:  YIL078w YKL194c
  Spo:  SPAC24C9.09 SPBC25H2.02
  Ecu:  ECU07g1570
  Aae:  aq_1667
  Tma:  TM0740 TM0751_1
  Fnu:  FN0611
  Dra:  DR2081
  Cac:  CAC0672_1 CAC2362
  Cgl:  Cgl1631
  Mtu:  Rv2614c
  MtC:  MT2689
  Mle:  ML0456
  Lla:  L0357
  Spy:  SPy0517
  Spn:  SP1631
  Sau:  SA1506
  Lin:  lin1594
  Bsu:  BS_thrS BS_thrZ
  Bha:  BH3141
  Syn:  sll0078
  Nos:  all4723 alr0335
  Eco:  thrS
  EcZ:  ZthrS
  Ecs:  ECs2426
  Ype:  YPO2433
  Sty:  STM1333
  Buc:  BU125
  Vch:  VCA0287
  Pae:  PA2744
  Hin:  HI1367
  Pmu:  PM0593
  Xfa:  XF0736
  Nme:  NMB0720
  NmA:  NMA0929
  Rso:  RSc1577
  Hpy:  HP0123
  jHp:  jhp0113
  Cje:  Cj0206
  Atu:  AGc3205
  Sme:  SMc01010
  Bme:  BMEI0915
  Mlo:  mll0914
  Ccr:  CC0464
  Rpr:  RP221
  Rco:  RC0296
  Ctr:  CT581
  Cpn:  CPn0806
  Tpa:  TP0667_1 TP0837
  Bbu:  BB0720
  Uur:  UU534
  Mpu:  MYPU_7460
  Mpn:  MPN553
  Mge:  MG375
_______

[J] COG0442 Prolyl-tRNA synthetase
  Afu:  AF1609
  Hbs:  VNG0403G
  Mac:  MA3886
  Mth:  MTH611
  Mja:  MJ1238
  Mka:  MK1229
  Tac:  Ta0937
  Tvo:  TVN1081
  Pho:  PH1006
  Pab:  PAB1724
  Pya:  PAE2165
  Sso:  SSO0569
  Ape:  APE2328
  Sce:  YER087w YHR020w_2
  Spo:  SPBC19C7.06_2 SPBC24C6.03
  Ecu:  ECU02g1360
  Aae:  aq_365
  Tma:  TM0514
  Fnu:  FN1658
  Dra:  DR1266
  Cac:  CAC3178
  Cgl:  Cgl1948
  Mtu:  Rv2845c
  MtC:  MT2911
  Mle:  ML1553
  Lla:  L0356
  Spy:  SPy1962
  Spn:  SP0264
  Sau:  SA1106
  Lin:  lin1356
  Bsu:  BS_proS
  Bha:  BH2419
  Syn:  sll1425
  Nos:  alr5053
  Eco:  proS
  EcZ:  ZproS
  Ecs:  ECs0196
  Ype:  YPO1068
  Sty:  STM0242
  Buc:  BU239
  Vch:  VC0875
  Pae:  PA0956
  Hin:  HI0729
  Pmu:  PM1370
  Xfa:  XF0445
  Nme:  NMB1339
  NmA:  NMA1553
  Rso:  RSc2816
  Hpy:  HP0238
  jHp:  jhp0223
  Cje:  Cj0543
  Atu:  AGc2372
  Sme:  SMc01934
  Bme:  BMEI1140
  Mlo:  mll1344
  Ccr:  CC1931
  Rpr:  RP384
  Rco:  RC0528
  Ctr:  CT393
  Cpn:  CPn0500
  Tpa:  TP0160
  Bbu:  BB0402
  Uur:  UU452
  Mpu:  MYPU_1830
  Mpn:  MPN402
  Mge:  MG283
_______

[O] COG0443 Molecular chaperone
  Hbs:  VNG0491G
  Mac:  MA0087 MA1478
  Mth:  MTH1290
  Tac:  Ta1087
  Tvo:  TVN0488
  Sce:  YAL005c YBL075c YBR169c YDL229w YEL030w YER103w YHR064c
        YJL034w YJR045c YKL073w YLL024c YLR369w YNL209w YPL106c
  Spo:  SPAC110.04c SPAC13G7.02c SPAC1F5.06 SPAC22A12.15c SPAC57A7.12 SPAC664.11 SPBC1709.05
        SPCC1739.13
  Ecu:  ECU02g0100 ECU03g0520 ECU11g0540 ECU11g1830
  Aae:  aq_996
  Tma:  TM0373
  Fnu:  FN0116
  Dra:  DR0129
  Cac:  CAC0472 CAC0473 CAC1282
  Cgl:  Cgl2327 Cgl2740
  Mtu:  Rv0312 Rv0350 Rv2264c
  MtC:  MT0326 MT0365 MT2324
  Mle:  ML2496
  Lla:  L178206
  Spy:  SPy1760
  Spn:  SP0517
  Sau:  SA1409
  Lin:  lin1510
  Bsu:  BS_dnaK
  Bha:  BH1346
  Syn:  sll0058 sll0170 sll1932 slr0086
  Nos:  all0711 all4477 alr1264 alr1742 alr2446 alr2990
  Eco:  dnaK hscA ybeW yegD
  EcZ:  ZdnaK ZhscA ZybeW ZyegD
  Ecs:  ECs0014 ECs0689 ECs2878 ECs3392
  Ype:  YPO0468 YPO2840 YPO2892
  Sty:  STM0012 STM0659 STM2125 STM2539
  Buc:  BU153 BU605
  Vch:  VC0752 VC0855 VC1373_1 VC1374 VC1386
  Pae:  PA3810 PA4761 PA4873
  Hin:  HI0373 HI1237
  Pmu:  PM0322 PM0736
  Xfa:  XF2340
  Nme:  NMB0554 NMB1131 NMB1169
  NmA:  NMA0736 NMA1340
  Rso:  RSc0639 RSc1024 RSc2635 RSp0521
  Hpy:  HP0109
  jHp:  jhp0101
  Cje:  Cj0759
  Atu:  AGc1814 AGc195
  Sme:  SMc02376 SMc02857
  Bme:  BMEI1549 BMEI2002
  Mlo:  mll4757 mll5617
  Ccr:  CC0010 CC1476
  Rpr:  RP185 RP200
  Rco:  RC0233 RC0262
  Ctr:  CT396
  Cpn:  CPn0503
  Tpa:  TP0216
  Bbu:  BB0264 BB0518
  Uur:  UU339
  Mpu:  MYPU_2230
  Mpn:  MPN434
  Mge:  MG305
_______

[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
  Afu:  AF1770
  Hbs:  VNG2344G VNG2363Gm VNG2526G_1
  Mac:  MA0299 MA0698 MA0879 MA1245 MA1911 MA2479 MA3046
        MA3457 MA3464 MA3908 MA4252 MA4598
  Tac:  Ta0265 Ta1325
  Tvo:  TVN0511 TVN1329
  Pho:  PH0505 PH0810 PH1412 PH1959
  Pab:  PAB0094 PAB0630 PAB1196 PAB1346 PAB1874
  Pya:  PAE1297 PAE3317
  Sso:  SSO1276 SSO1282 SSO2616 SSO2670 SSO3046
  Ape:  APE0301 APE1399 APE1578 APE2261
  Aae:  aq_2160
  Tma:  TM0028 TM0058 TM0074 TM0303 TM0498 TM0501 TM1064
        TM1152 TM1194 TM1220 TM1749
  Fnu:  FN0399 FN1110 FN1501 FN1524 FN1649
  Dra:  DR1568
  Cac:  CAC0179 CAC3182 CAC3629 CAC3636 CAC3642
  Cgl:  Cgl2601_2
  Lla:  L148976 L93148
  Spy:  SPy0296 SPy2003
  Spn:  SP1888
  Sau:  SA0847 SA0851 SA1212 SA2252
  Lin:  lin2297
  Bsu:  BS_appD BS_dppD BS_oppD
  Bha:  BH0028 BH0350 BH0570 BH1799 BH2077 BH3640 BH3646
  Eco:  ddpD dppD nikD oppD
  EcZ:  Z2226 ZdppD ZnikD ZoppD
  Ecs:  ECs1746 ECs2088 ECs4346 ECs4421
  Ype:  YPO2185 YPO3452 YPO4000
  Sty:  STM1743 STM3627
  Vch:  VC0617 VC1094
  Pae:  PA4505
  Hin:  HI1121 HI1185
  Pmu:  PM0239 PM1907
  Rso:  RSc1884 RSc2867
  Hpy:  HP0301
  jHp:  jhp0286
  Cje:  Cj1581c
  Atu:  AGc2212 AGc4569 AGl1475 AGl2743 AGl2781 AGl3200 AGl360
        AGl525 AGl868 AGpA366 AGpT258
  Sme:  SMa0108 SMa1365 SMa1371 SMa1647 SMa2081 SMb20478_2 SMc00789
        SMc01528 SMc02423 SMc03125
  Bme:  BMEI0437 BMEII0200 BMEII0206 BMEII0222 BMEII0287 BMEII0490 BMEII0507
        BMEII0863
  Mlo:  mll0596 mll5437 mll9133 mll9147 mlr3400 mlr5419 mlr5516
        mlr5893 mlr6085 mlr6674 mlr9270
  Ctr:  CT201 CT690
  Cpn:  CPn0201 CPn0682
  Bbu:  BB0334
  Uur:  UU560_2
  Mpu:  MYPU_2850 MYPU_4120
  Mpn:  MPN217
  Mge:  MG079
_______

[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division
  Sce:  YGL236c
  Spo:  SPBC30B4.06c
  Aae:  aq_761
  Tma:  TM0263
  Fnu:  FN0007 FN1723
  Dra:  DR0027 DR1681
  Cac:  CAC3733
  Lla:  L97777
  Spy:  SPy2185
  Spn:  SP0120
  Sau:  SA2500
  Lin:  lin2942
  Bsu:  BS_gidA
  Bha:  BH4061
  Syn:  sll0202
  Nos:  alr3561
  Eco:  gidA
  EcZ:  ZgidA
  Ecs:  ECs4683
  Ype:  YPO4130
  Sty:  STM3874
  Buc:  BU001
  Vch:  VC2775
  Pae:  PA5565
  Hin:  HI0582
  Pmu:  PM1485
  Xfa:  XF2106
  Nme:  NMB0193
  NmA:  NMA0074
  Rso:  RSc3328
  Hpy:  HP0213
  jHp:  jhp0199
  Cje:  Cj1188c
  Atu:  AGc5134
  Sme:  SMc02798
  Bme:  BMEI0007
  Mlo:  mll4482
  Ccr:  CC3755
  Rpr:  RP056
  Rco:  RC0084
  Ctr:  CT498
  Cpn:  CPn0617
  Tpa:  TP0044
  Bbu:  BB0178
  Uur:  UU039
  Mpu:  MYPU_2530
  Mpn:  MPN557
  Mge:  MG379
_______

[R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases
  Afu:  AF0254 AF0273 AF0395 AF0400_1 AF0455_2 AF0557 AF0951
        AF1262_2 AF1329 AF1858 AF2272
  Hbs:  VNG1804G
  Mac:  MA4636
  Mth:  MTH1354
  Mja:  MJ0649
  Mka:  MK0881
  Tac:  Ta0162m_2 Ta0837 Ta1129 Ta1413 Ta1467
  Tvo:  TVN0232_2 TVN0473 TVN0816 TVN1206 TVN1432
  Pho:  PH0572 PH0890 PH1363 PH1509 PH1749
  Pab:  PAB0184 PAB0212 PAB0936 PAB1842 PAB1931 PAB3086
  Pya:  PAE1131 PAE1841 PAE2371 PAE2618 PAE2628 PAE2834
  Sso:  SSO0124 SSO0186 SSO1225 SSO1900_2 SSO2025_2 SSO2261 SSO2283
        SSO2629 SSO2892
  Ape:  APE0595 APE1043m
  Sce:  YNR074c
  Spo:  SPAC26F1.14c_2 SPBC2G5.06c
  Aae:  aq_2186 aq_232 aq_235 aq_788 aq_835
  Tma:  TM0379 TM0395 TM0754 TM1433
  Fnu:  FN0182 FN1088 FN1903_1
  Dra:  DR0992
  Cac:  CAC0905 CAC1044_2 CAC1323 CAC3371_2 CAC3408_2
  Cgl:  Cgl0534 Cgl2652
  Mtu:  Rv0331 Rv0688 Rv1175c_2 Rv1869c
  MtC:  MT0346 MT0716 MT1212_2 MT1918
  Lla:  L178227 L194050_1 L196579
  Spy:  SPy1150 SPy1681
  Spn:  SP1469
  Sau:  SA0084 SA0831
  Lin:  lin0492_2 lin2337_2 pli0040_1 pli0044
  Bha:  BH3776
  Syn:  slr0876
  Nos:  alr4512
  Eco:  fadH_2 hcaD ygbD
  EcZ:  ZhcaD ZygbD ZygjL_2
  Ecs:  ECs3408 ECs3567 ECs3963_2
  Ype:  YPO0589_2 YPO3001_1
  Sty:  STM2841 STM3219_2
  Vch:  VC1993_2 VCA0644_1
  Pae:  PA1266 PA1488 PA2193 PA2194 PA2345 PA2566 PA3092_2
        PA4814_2 PA4986_2 PA5349 PA5398_2 PA5418_1
  Pmu:  PM1477
  Rso:  RSc1103_1 RSc1542 RSc3262 RSp0048_1 RSp0058_2 RSp0682_2
  Atu:  AGc1870 AGc4611_2 AGl1103_1 AGl1275gl_1 AGl1574_1 AGpT58 AGpTbx141
  Sme:  SMa0257_2 SMa1381 SMa2225 SMb20820 SMb21570_2 SMc00914 SMc01990
        SMc02016 SMc02606_1 SMc03931_1
  Bme:  BMEI1720_1 BMEII0557
  Mlo:  mll2431 mll3108_1 mll5230_1 mll5522 mll6238_1 mll7304_1 mll9218
        mlr1275_1 mlr5000 mlr7027 mlr7028 mlr8292_2
  Ccr:  CC3525
  Tpa:  TP0921
  Bbu:  BB0728
  Mpu:  MYPU_0230
  Mpn:  MPN394
  Mge:  MG275
_______

[H] COG0447 Dihydroxynaphthoic acid synthase
  Afu:  AF1191
  Hbs:  VNG1079G
  Cgl:  Cgl0456
  Mtu:  Rv0548c
  MtC:  MT0573
  Mle:  ML2263
  Lla:  L0171
  Sau:  SA0898
  Lin:  lin1781
  Bsu:  BS_menB
  Syn:  sll1127
  Nos:  all2347
  Eco:  menB
  EcZ:  ZmenB
  Ecs:  ECs3150
  Ype:  YPO2525
  Sty:  STM2307
  Vch:  VC1973
  Hin:  HI0968
  Pmu:  PM1096
_______

[G] COG0448 ADP-glucose pyrophosphorylase
  Tma:  TM0239 TM0240
  Fnu:  FN0854 FN0855
  Dra:  DR1689 DR1824
  Cac:  CAC2237 CAC2238
  Cgl:  Cgl1094
  Mtu:  Rv1213
  MtC:  MT1251
  Mle:  ML1069
  Lla:  L95975 L97131
  Spn:  SP1122 SP1123
  Bsu:  BS_glgC BS_glgD
  Bha:  BH1086 BH1087
  Syn:  slr1176
  Nos:  all4645
  Eco:  glgC
  EcZ:  ZglgC
  Ecs:  ECs4275
  Ype:  YPO3940
  Sty:  STM3536
  Vch:  VC1727 VCA0699
  Hin:  HI1359
  Pmu:  PM0543
  Atu:  AGl1560
  Sme:  SMc03923
  Mlo:  mlr7588
  Ctr:  CT489
  Cpn:  CPn0607
_______

[M] COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
  Hbs:  VNG0006G
  Mac:  MA3023
  Mth:  MTH171
  Mja:  MJ1420_1 MJ1420_3
  Mka:  MK0127
  Tac:  Ta0479
  Tvo:  TVN0825
  Pho:  PH0243
  Pab:  PAB2201
  Pya:  PAE3025
  Sso:  SSO0016_1 SSO0382 SSO1268
  Ape:  APE1205
  Sce:  YKL104c YMR084w YMR085w
  Spo:  SPBC12C2.11
  Ecu:  ECU07g1280
  Aae:  aq_301
  Tma:  TM0148
  Fnu:  FN0452 FN0628
  Dra:  DR0302
  Cac:  CAC0158
  Cgl:  Cgl2219
  Mtu:  Rv3436c
  MtC:  MT3542
  Mle:  ML0371
  Lla:  L33556
  Spy:  SPy1280
  Spn:  SP0266
  Sau:  SA1959
  Lin:  lin0034 lin0734 lin2107
  Bsu:  BS_glmS
  Bha:  BH0268
  Syn:  sll0220
  Nos:  alr3464
  Eco:  glmS
  EcZ:  ZglmS
  Ecs:  ECs4671
  Ype:  YPO4118
  Sty:  STM0573 STM3861 STM4539
  Buc:  BU026
  Vch:  VC0487
  Pae:  PA5549
  Hin:  HI0429
  Pmu:  PM1731
  Xfa:  XF0141
  Nme:  NMB0031
  NmA:  NMA0276
  Rso:  RSc0178
  Hpy:  HP1532
  jHp:  jhp1420
  Cje:  Cj1366c
  Atu:  AGc3284
  Sme:  SMa0878 SMc00231
  Bme:  BMEII0685
  Mlo:  mll0833 mlr6386 mlr6774
  Ccr:  CC0118
  Ctr:  CT816
  Cpn:  CPn0968
  Tpa:  TP0861
_______

[O] COG0450 Peroxiredoxin
  Afu:  AF0270
  Mac:  MA4103
  Mth:  MTH159
  Mja:  MJ0736
  Tac:  Ta0152 Ta0473 Ta0954m
  Tvo:  TVN0222 TVN0443 TVN0444 TVN1099
  Pho:  PH1217
  Pab:  PAB1673
  Pya:  PAE2085
  Sso:  SSO2121
  Ape:  APE2278
  Sce:  YBL064c YDR453c YML028w
  Spo:  SPAC27D7.12c SPCC576.03c
  Ecu:  ECU03g1190
  Aae:  aq_486 aq_858
  Tma:  TM0807
  Fnu:  FN1983
  Dra:  DR2242
  Mtu:  Rv2428
  MtC:  MT2503
  Mle:  ML2042
  Lla:  L135351
  Spy:  SPy2079
  Sau:  SA0366
  Lin:  lin1645
  Bsu:  BS_ahpC BS_ykuU
  Bha:  BH2665
  Syn:  sll0755 slr1198
  Nos:  alr4404 alr4641
  Eco:  ahpC
  EcZ:  ZahpC
  Ecs:  ECs0644
  Ype:  YPO3194
  Sty:  STM0402 STM0608
  Buc:  BU182
  Vch:  VC0731
  Pae:  PA0139 PA0848 PA3450 PA3529
  Pmu:  PM0795
  Xfa:  XF1530
  Rso:  RSc0754 RSc1646 RSp0245
  Hpy:  HP1563
  jHp:  jhp1471
  Cje:  Cj0334
  Atu:  AGc2729
  Sme:  SMb20964
  Bme:  BMEII0577
  Mlo:  mll2432 mll3745
  Ccr:  CC2918
  Rpr:  RP327
  Rco:  RC0451
  Ctr:  CT603
  Cpn:  CPn0778
  Tpa:  TP0509
_______

[MG] COG0451 Nucleoside-diphosphate-sugar epimerases
  Afu:  AF0361 AF2016
  Hbs:  VNG0063G VNG0065G VNG0073C VNG0128C VNG0267H VNG0405C VNG0752G
  Mac:  MA1185 MA4460 MA4464
  Mth:  MTH373 MTH375 MTH380
  Mja:  MJ0211 MJ1055
  Mka:  MK0724
  Tac:  Ta0011 Ta0343 Ta0693 Ta1073 Ta1111 Ta1239 Ta1445
  Tvo:  TVN0059 TVN0357 TVN0454 TVN0528 TVN0887 TVN0905
  Pho:  PH0378 PH1742
  Pab:  PAB1299 PAB2145
  Pya:  PAE1922 PAE3631
  Sso:  SSO0166 SSO0809 SSO2583 SSO2981
  Sce:  YDR541c YGL001c YGL039w YGL157w YLL056c YOL151w
  Spo:  SPAC513.07 SPBC1773.04 SPBC2A9.02 SPBC3F6.02c
  Aae:  aq_1335 aq_344
  Tma:  TM0509 TM0630
  Fnu:  FN1299 FN1694 FN1703 FN1847
  Dra:  DR0709 DR0711 DR0832 DRA0222
  Cac:  CAC0731 CAC0794 CAC2166 CAC2179 CAC2334 CAC3503
  Cgl:  Cgl0323
  Mtu:  Rv0112 Rv0139 Rv0501 Rv0536 Rv1106c Rv1512 Rv1868_1
        Rv2047c_1 Rv3468c Rv3634c Rv3725 Rv3784
  MtC:  MT0121 MT0147 MT0522 MT0560 MT1137 MT1562 MT1917_1
        MT2107_1 MT3032 MT3574 MT3736 MT3828 MT3893_1
  Mle:  ML0204 ML1942 ML2428
  Lla:  L12335 L161121
  Spn:  SP0359_1
  Sau:  SA0123 SA0149_1 SA0157 SA0317 SA0511 SA0613 SA2231
  Lin:  lin1855
  Bsu:  BS_yfnG BS_ytbQ BS_ytcB
  Bha:  BH2304 BH2891 BH3379 BH3649 BH3709 BH3715
  Syn:  sll0456 sll0576 sll1213 slr0583 slr0809 slr0984 slr1020
        slr1540 slr1617 slr1706
  Nos:  all3509 all3908 all4826 all5295 all5345 alr0480 alr0657
        alr1744 alr2827 alr4268 alr4831
  Eco:  rfaD wcaG ybjS yeeZ yfbG_2
  EcZ:  Z1102 Z3178 Z3206 Z3513_2 ZfcI ZrfaD ZwcaG
  Ecs:  ECs0954 ECs2818 ECs2838 ECs2847 ECs2857 ECs3143_2 ECs4497
  Ype:  YPO0058 YPO1355 YPO1551 YPO1559 YPO1979 YPO1982 YPO2238
        YPO2420_2 YPO3112
  Sty:  STM0932 STM2070 STM2089 STM2091 STM2108 STM2299_2 STM2914
        STM3710
  Vch:  VC0240 VC0262 VC1697
  Pae:  PA1559 PA1560 PA3146 PA3337 PA3554_2 PA4068 PA4361
        PA4631 PA5343 PA5454
  Hin:  HI0094 HI1014 HI1114
  Pmu:  PM0814 PM1008_1 PM1342 PM1360
  Xfa:  XF0610 XF0611 XF1825 XF2279
  Nme:  NMB0809 NMB0828
  NmA:  NMA1019 NMA1037
  Rso:  RSc0915 RSc1319 RSc1462 RSc2433 RSc3335 RSp0831 RSp0960
        RSp1636
  Hpy:  HP0045 HP0859
  jHp:  jhp0039 jhp0793
  Cje:  Cj1151c Cj1319 Cj1427c Cj1428c
  Atu:  AGc3001 AGc3582 AGc3984 AGc4963 AGc499 AGl1415 AGl161
        AGl1767 AGl185 AGl3008 AGl3333 AGl537 AGpA682
  Sme:  SMa0241 SMa0715 SMa1985 SMb20012_1 SMb20239 SMb20244 SMb20245
        SMb20458 SMb20663 SMb21052 SMb21060 SMb21228 SMb21417 SMb21426
        SMc00405 SMc00430 SMc01324 SMc02640 SMc03961 SMc03963 SMc04145
  Bme:  BMEI1237 BMEII0254 BMEII0440 BMEII0731 BMEII0832 BMEII0849 BMEII0850
        BMEII1094
  Mlo:  mll1234 mll1262 mll1415 mll1687 mll1975 mll2153 mll2981
        mll6759 mll6957 mll7572 mll7879 mll9007 mlr1075 mlr2565
        mlr3829 mlr4637 mlr6767 mlr7549 mlr7558 mlr8551 mlr8749
        mlr9394
  Ccr:  CC1055 CC1146 CC1430 CC2378 CC3425
  Bbu:  BB0444
_______

[H] COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase
  Afu:  AF1645
  Hbs:  VNG0572G
  Mac:  MA1280
  Mth:  MTH1216
  Mja:  MJ0913
  Mka:  MK0713
  Tac:  Ta0889
  Tvo:  TVN0973
  Pho:  PH1444
  Pab:  PAB1897
  Pya:  PAE1204
  Sso:  SSO0210
  Ape:  APE1959
  Sce:  YIL083c YKL088w YKR072c YOR054c
  Spo:  SPAC15E1.04_1 SPCC4B3.18
  Aae:  aq_815
  Tma:  TM1687
  Fnu:  FN0711
  Dra:  DR0579
  Cac:  CAC1720
  Cgl:  Cgl1566 Cgl1650
  Mtu:  Rv1391
  MtC:  MT1436
  Mle:  ML0543
  Lla:  L166912 L167675
  Spy:  SPy1221 SPy1222
  Spn:  SP0165 SP1230 SP1231
  Sau:  SA1054
  Lin:  lin1939
  Bsu:  BS_spoVFB BS_yloI
  Bha:  BH2402 BH2510
  Syn:  sll0250
  Nos:  all3111
  Eco:  dfp
  EcZ:  Zdfp
  Ecs:  ECs4514
  Ype:  YPO0048
  Sty:  STM3730
  Vch:  VC0215
  Pae:  PA5320
  Hin:  HI0953
  Pmu:  PM1153
  Xfa:  XF0149
  Nme:  NMB1658
  NmA:  NMA1916
  Rso:  RSc2461
  Hpy:  HP0841
  jHp:  jhp0779
  Cje:  Cj0822
  Atu:  AGc552
  Sme:  SMc01161
  Bme:  BMEII0235
  Mlo:  mlr3167
  Ccr:  CC3712
  Bbu:  BB0812
_______

[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
  Afu:  AF0521 AF1254 AF1511_1 AF1517
  Hbs:  VNG0176H VNG0654C_1 VNG1215G VNG1398C VNG1617H VNG1845C VNG2277H
        VNG2522C
  Mac:  MA0198 MA0378 MA0782 MA0854 MA0918 MA1191 MA1792
        MA2443 MA3114 MA3541 MA3570 MA3654 MA3954 MA4514
  Mth:  MTH336 MTH676 MTH779
  Mja:  MJ1207
  Tac:  Ta0277 Ta0374 Ta0375 Ta0455 Ta0457 Ta0817 Ta0821
  Tvo:  TVN0767 TVN0769 TVN1324
  Pho:  PH0012 PH0694 PH0736 PH0855 PH1933
  Pab:  PAB0870 PAB0896 PAB1226 PAB1583 PAB2346
  Pya:  PAE0945 PAE1143 PAE1652
  Sso:  SSO2813 SSO2870
  Ape:  APE0389 APE0390 APE1324
  Sce:  YDR071c YEL066w YFL017c YJL127c_1 YMR069w YOR253w YPR193c
  Spo:  SPAC1002.07c SPAC16E8.03 SPAC21E11.04 SPAC9.02c SPBC1271.07c SPCC550.08 SPCC663.13c
        SPCC825.04c
  Ecu:  ECU07g1760
  Aae:  aq_1482
  Tma:  TM0577 TM1720
  Fnu:  FN0055 FN1006 FN1057 FN1107 FN1126 FN1278 FN1295
        FN1384 FN1587
  Dra:  DR0125 DR0188 DR0213 DR0244 DR0608 DR0675 DR0676
        DR0677 DR0681 DR0682 DR0797 DR1057 DR1058 DR1137
        DR1396 DR1678 DR1918 DR1975 DR2254 DR2255 DR2334
        DR2355 DR2432 DR2441 DRA0019 DRA0062
  Cac:  CAC0160 CAC0184 CAC1007 CAC1416 CAC1468 CAC2468 CAC2491
        CAC2509 CAC2529 CAC2530 CAC2539 CAC2560 CAC2571 CAC2751
        CAC2935 CAC3256 CAC3374 CAC3445 CAP0110 CAP0111
  Cgl:  Cgl0178 Cgl0553 Cgl1121_2 Cgl1490 Cgl1638 Cgl1902 Cgl2683
  Mtu:  Rv0133 Rv0428c Rv0919 Rv0998_2 Rv2669 Rv2775 Rv3216
  MtC:  MT0141 MT0443 MT0945 MT1027_2 MT2743 MT2845 MT3312
  Mle:  ML0187_2
  Lla:  L100575 L108967 L117867 L126998 L170990 L182026 L189315
        L199277 L27646 L36177 L45003 L50174 L67527 L69304
  Spy:  SPy0346 SPy1144 SPy1546 SPy1734 SPy1994
  Spn:  SP0256 SP0580 SP0950 SP1019 SP1023 SP1236 SP1464
        SP1516 SP1519 SP1520 SP1592 SP1943
  Sau:  SA0426 SA0559 SA0612 SA0631 SA0754 SA0893 SA0906
        SA1019 SA1252 SA1931 SA2159 SA2161 SA2190 SA2355
        SA2454
  Lin:  lin0244 lin0299 lin0371 lin0413 lin0611 lin0623 lin0633
        lin0655 lin0812 lin0816 lin0975 lin1092 lin2222 lin2246
        lin2361 lin2444 lin2499 lin2807 lin2871
  Bsu:  BS_bltD BS_cgeE BS_paiA BS_ybbJ BS_ybfA_2 BS_ydgE BS_ydhI
        BS_yesJ BS_yhcX_1 BS_yhdJ BS_yhfO BS_yitH BS_yitI BS_yjcF
        BS_ykwB BS_ylbP BS_yobR BS_yqjY BS_yqkA_1 BS_ysnE BS_ytmI
        BS_yuaI BS_yvbK BS_yxbD BS_yxeL BS_yyaR BS_yyaT BS_yybD
        BS_yycN
  Bha:  BH0359 BH0386 BH0426 BH0466 BH0478 BH0920 BH0988
        BH1000 BH1041 BH1044 BH1073 BH1089_1 BH1438 BH1453_2
        BH1582 BH1614_2 BH1968 BH2153 BH2157 BH2580 BH2609
        BH2610 BH2907 BH3076 BH3330 BH3804 BH3829 BH3929
  Syn:  sll0286 sll0310 sll0786 sll1469 sll1552 sll1671 slr0517
        slr1340 slr1501 slr1888_2 slr1906
  Nos:  all0118 all0768 all0769_2 all0878 all2223 all3024 all3130
        all4217 all4397 all7170 all7175 alr0113 alr0541 alr2925
        alr3535 alr4250 alr4536 alr4964 alr7336 asl7018 asr8541
  Eco:  phnO wecD yafP yedL yfiQ_2 yhhY yiaC
        yiiD yjaB yjgM
  EcZ:  Z3025 Z4777 Z4832 Z5868 ZphnO ZwecD ZyafP
        ZyedL ZyfiQ_2 ZyhhY ZyiaC ZyiiD ZyjaB
  Ecs:  ECs0261 ECs2671 ECs2673 ECs3451_2 ECs4262 ECs4290 ECs4307
        ECs4435 ECs4723 ECs4811 ECs4930 ECs5076 ECs5233
  Ype:  YPO0032 YPO2508 YPO3272_2 YPO3444 YPO3757 YPO3860 YPO4075
  Sty:  STM1619 STM1857 STM2651_2 STM2905 STM3546 STM3643 STM3651
        STM3653 STM3924 STM4029 STM4181 STM4287 STM4318 STM4473
  Vch:  VC0106 VC1217 VC1341 VC2740 VCA0318 VCA0382 VCA0400
        VCA0402_2 VCA0436 VCA0479 VCA0481 VCA0487 VCA0494 VCA0505
        VCA0574_2 VCA0825
  Pae:  PA0249 PA0478 PA0483 PA1062 PA1377 PA1428 PA1885
        PA2271 PA2544 PA2631 PA3127_2 PA3368 PA4026 PA4114
        PA4166 PA4794 PA4863 PA5432 PA5475
  Hin:  HI0677
  Pmu:  PM0530 PM1312 PM1553
  Xfa:  XF0044 XFa0025
  Nme:  NMB0001 NMB0105 NMB0593_2 NMB1018
  NmA:  NMA0169 NMA0248 NMA0796_2 NMA1244
  Rso:  RSc0120 RSc1774 RSc1816 RSc2436 RSc2565 RSc3098 RSc3176
        RSp0081 RSp0265 RSp0300 RSp1436 RSp1626
  Hpy:  HP0935
  jHp:  jhp0869
  Cje:  Cj0295 Cj0962 Cj1063 Cj1715
  Atu:  AGc112 AGc1617 AGc2243_2 AGc2411 AGc2440 AGc2442 AGc3193
        AGc3768 AGc4057 AGc4106 AGc414 AGc4163 AGc4167 AGc420
        AGc4255 AGc4257 AGc449 AGc4826 AGl1711 AGl1813 AGl1945_2
        AGl2013 AGl2355 AGl2625 AGl2808 AGl2832 AGl2851 AGpA325
        AGpAbx82
  Sme:  SMa1146_2 SMa1176 SMa1660 SMa1835 SMa1853 SMb21092 SMb21153
        SMc00108 SMc00352 SMc00397 SMc00589 SMc00739 SMc00906 SMc01017
        SMc01171 SMc01349 SMc01462 SMc01545 SMc01824 SMc02449 SMc02865
        SMc03241 SMc04221
  Bme:  BMEI0125 BMEI0158 BMEI0204 BMEI0930 BMEI1067
  Mlo:  mll0104 mll0676 mll0817 mll1765 mll1819 mll2222 mll2524
        mll2713 mll3460 mll4122 mll4390 mll4440 mll5576 mll5985
        mll6577 mll7039 mll7165 mll7433 mll8440 mlr0192 mlr0356
        mlr0415 mlr0751 mlr1969 mlr3150 mlr3271 mlr3958 mlr4407
        mlr4804 mlr6131 mlr6591_2 mlr7051 mlr7240 mlr8209_2
  Ccr:  CC0191 CC0402 CC0816 CC0871 CC1092 CC1470 CC1609
        CC1995 CC2073 CC2110 CC2209 CC2265 CC3149_2 CC3261
        CC3561
  Rco:  RC0741
  Ctr:  CT458
  Cpn:  CPn0575
  Uur:  UU555
_______

[D] COG0455 ATPases involved in chromosome partitioning
  Afu:  AF0696 AF1937
  Hbs:  VNG0946G VNG2130G
  Mth:  MTH1840
  Mja:  MJ0169 MJ0410 MJ0547 MJ0924
  Mka:  MK0218
  Pho:  PH0612 PH1600 PH1806
  Pab:  PAB0954 PAB1983 PAB2105
  Aae:  aq_1217
  Tma:  TM0906
  Cac:  CAC2145
  Mtu:  Rv0530 Rv2787_2 Rv3860 Rv3876 Rv3888c
  MtC:  MT0552 MT2857_2 MT3975 MT3990 MT4003
  Mle:  ML0048 ML0798_2
  Bsu:  BS_ylxH
  Bha:  BH2436
  Nos:  all2033 all2797
  Vch:  VC2067
  Pae:  PA1454
  Rso:  RSp1391
  Hpy:  HP1034
  jHp:  jhp0390
  Cje:  Cj0063c
  Tpa:  TP0712 TP0853
  Bbu:  BB0269 BB0361 BB0726
_______

[R] COG0456 Acetyltransferases
  Afu:  AF0739 AF2367
  Hbs:  VNG1457C VNG2575G
  Mac:  MA0320 MA2338 MA2815 MA2816 MA4633
  Mth:  MTH1284 MTH999
  Mja:  MJ1530
  Mka:  MK0549
  Tac:  Ta0058 Ta1140
  Tvo:  TVN0014 TVN1216
  Pho:  PH0296
  Pab:  PAB1098
  Pya:  PAE0771 PAE2246
  Sso:  SSO0082 SSO0209
  Ape:  APE1954
  Sce:  YHR013c YPR051w YPR131c
  Spo:  SPAC15E1.08 SPBC13E7.02_2 SPBC15D4.06 SPCC16C4.12
  Ecu:  ECU06g0460 ECU06g1000 ECU07g1680
  Aae:  aq_567
  Tma:  TM1178
  Fnu:  FN0369 FN2046
  Dra:  DR1978
  Cac:  CAC1840 CAC2840 CAC3648
  Cgl:  Cgl0577 Cgl2122 Cgl2522
  Mtu:  Rv0819 Rv2170 Rv3420c
  MtC:  MT0841 MT2226 MT3529
  Mle:  ML0378_2 ML0903 ML2193
  Lla:  L92414 L93051
  Spy:  SPy1873
  Spn:  SP0128 SP0590 SP0640
  Sau:  SA1855 SA2076
  Lin:  lin1095 lin1100 lin2182
  Bsu:  BS_spsD BS_ydiD
  Bha:  BH0299_2 BH0547 BH1583 BH2104
  Syn:  slr0853
  Nos:  all1990 alr2998
  Eco:  rimI ypeA
  EcZ:  Z3699 ZrimI
  Ecs:  ECs3305 ECs5331
  Ype:  YPO0429 YPO3031
  Sty:  STM2449 STM4558
  Vch:  VC0657 VC2332 VCA0470
  Pae:  PA1943 PA3460_1 PA4534 PA4678
  Hin:  HI0010
  Pmu:  PM0960
  Xfa:  XF0441
  Nme:  NMB1872
  NmA:  NMA0584
  Rso:  RSc1368 RSc2924
  Cje:  Cj0225
  Atu:  AGc2432 AGc2436 AGc619
  Sme:  SMb20482_1 SMc01034 SMc01117
  Bme:  BMEI1978
  Mlo:  mll4453 mlr4309 mlr5531 mlr7776
  Ccr:  CC0058
  Uur:  UU311
_______

[R] COG0457 FOG: TPR repeat
  Afu:  AF0955 AF1970 AF2369
  Hbs:  VNG2468C
  Mac:  MA0079_3 MA0188 MA1362 MA1364 MA1582 MA1613 MA1699
        MA1873 MA1936_2 MA1943 MA1968 MA1970 MA2086 MA2088
        MA2097 MA2099 MA2193 MA2239 MA2243 MA2255 MA2309_2
        MA2609 MA2826 MA3254 MA3260 MA3290 MA3292 MA3293
        MA3418 MA3495 MA3704 MA3839 MA3892 MA3893 MA4306
        MA4611
  Mth:  MTH1585 MTH185 MTH591 MTH633_1 MTH67 MTH68 MTH72
        MTH82 MTH83
  Mja:  MJ0263 MJ0572 MJ0798 MJ0940 MJ0941 MJ1345 MJ1428
        MJECL18 MJECL19
  Tac:  Ta0038 Ta0401 Ta0402 Ta0458 Ta0561 Ta1127
  Tvo:  TVN0044 TVN0615 TVN0779 TVN1172 TVN1173 TVN1204
  Pho:  PH0026 PH0183 PH0592 PH0952_3 PH1836 PH1878
  Pab:  PAB0017 PAB1137 PAB2243 PAB2380 PAB2408
  Sso:  SSO0506 SSO2191 SSO2710 SSO2796 SSO3207_1
  Sce:  YBL084c YBR055c YBR112c YBR155w YCR060w YDL040c YDR235w
        YDR244w YGR047c YGR123c_1 YGR198w YHR117w YHR166c YJR032w_2
        YJR088c YKL022c YLR117c YLR216c_2 YLR292c YML046w YMR018w
        YMR229c_2 YNL121c YNL313c_2 YOL145c_1 YOR007c YOR027w YPR189w
  Spo:  SPAC17A2.04c SPAC17C9.01c SPAC17G6.19c SPAC1B3.03c_2 SPAC27D7.14c SPAC2F3.02 SPAC637.04
        SPAC6B12.12 SPAC6F12.14 SPAC6F12.15c SPBC14C8.18c SPBC23E6.09 SPBC31F10.11c SPBC32H8.06
        SPBC3F6.01c_1 SPBC418.02 SPBC4B4.09 SPBC543.02c_1 SPBC6B1.07 SPBC725.07 SPCC1183.07_2
        SPCC16C4.14c SPCC1919.05 SPCC338.07c SPCC645.14c
  Ecu:  ECU03g1400 ECU06g0150 ECU06g1430 ECU08g0840 ECU08g1340 ECU09g0870 ECU09g1180
        ECU11g1160
  Aae:  aq_1088 aq_1185 aq_1219 aq_1402 aq_1409 aq_1896 aq_1989
        aq_2197 aq_854
  Tma:  TM0756_1 TM1298 TM1348_2 TM1449 TM1695 TM1773
  Fnu:  FN0819 FN0847 FN1067 FN1267 FN1434 FN1484 FN1787
        FN1836 FN1964 FN1965
  Dra:  DR0121 DR0343_1 DR0937 DR1267 DR1528 DR1629_1 DR1891
        DR2358 DRA0288 DRA0297_1 DRA0342_1
  Cac:  CAC0045 CAC0186_2 CAC0324_2 CAC0404_2 CAC0412 CAC0415 CAC0416
        CAC0925 CAC0926 CAC0957_2 CAC1043_2 CAC1063 CAC1064 CAC1067
        CAC1214_2 CAC2336 CAC2402 CAC2490_2 CAC2801 CAC2822 CAC2998
        CAC3084 CAC3307 CAC3308_2 CAC3449 CAC3694 CAP0040_2 CAP0149_2
        CAP0161
  Lla:  L198787
  Spy:  SPy1012
  Spn:  SP1504
  Sau:  SA0718 SA1296 SA1379_2 SA1448
  Lin:  lin0965 lin1305 lin1374_2 lin1545 lin2036 lin2622
  Bsu:  BS_gutR BS_rapA BS_rapB BS_rapC BS_rapD BS_rapE BS_rapF
        BS_rapG BS_rapH BS_rapI BS_rapJ BS_rapK BS_ypiA BS_yqgP_2
        BS_yrrB BS_ysoA BS_yvcD
  Bha:  BH0479 BH0661 BH1262 BH1421_2 BH1669 BH1690 BH1814_2
        BH1987 BH2049 BH3054 BH3572 BH3696 BH3706 BH4014
  Syn:  sll0183_2 sll0314 sll0499_1 sll0606_1 sll0837 sll0886 sll0910
        sll0931 sll1251 sll1628_2 sll1667 sll1882 slr0151 slr0171
        slr0626_2 slr0751 slr0823 slr1196 slr1644 slr1956 slr1968_1
        slr2048
  Nos:  all0343 all0361 all0443 all0889 all1176_1 all1322_2 all1466
        all1699 all1820_1 all2170_1 all2423 all2487 all2787 all2893
        all3010 all3083 all3193 all3237 all3367_2 all3516 all3773_2
        all3780 all3838 all4078_1 all4382 all4659 all4857_2 all4926_2
        all4981 all5311_1 all7234_1 all7600 alr0554 alr0622 alr0691
        alr0963_1 alr1081 alr1364 alr1398_1 alr1548 alr1677 alr1799
        alr2768_2 alr2824_2 alr3017 alr3430 alr3437_2 alr3449 alr3584
        alr3607 alr3807 alr4531_2 alr4531_4 alr5340 alr7232_2 alr7318_1
  Eco:  nfrA ygeG ygeH_2 yhjL
  EcZ:  ZcesD ZnfrA ZygeG ZygeH_2 ZyhjLm
  Ecs:  ECs0600 ECs3708 ECs3709_2 ECs4410 ECs4576
  Ype:  YPCD1.30c YPO2511_1 YPO3051
  Sty:  STM1228 STM1399 STM1403 STM2876_2 STM2886 STM3616
  Vch:  VC0901 VC1367_1 VC1543 VCA0171_2
  Pae:  PA0015 PA1707 PA3063 PA3074_2 PA3706_2 PA4667
  Pmu:  PM0430 PM2006
  Xfa:  XF0007 XF2169 XF2647 XF2779_4
  Nme:  NMB0872
  NmA:  NMA1090
  Rso:  RSc0398 RSc1166 RSc2275 RSc3163 RSc3164 RSc3167 RSp0509
        RSp1647_2
  Hpy:  HP0275 HP1479
  jHp:  jhp0260 jhp1372
  Cje:  Cj0390 Cj0497 Cj1679
  Atu:  AGc1124 AGl1582 AGl2153 AGl2522_3 AGl275 AGl3032
  Sme:  SMa0570_3 SMa0601_2 SMa0664_2 SMa1583_3 SMa1680_3 SMb20300_3 SMb20539_3
        SMb20687 SMb20702_3 SMb20775 SMc00861 SMc01198_3 SMc01543_2 SMc03099_3
        SMc03144 SMc03935 SMc03985_3 SMc04004 SMc04292_3
  Bme:  BMEI0293 BMEI1531 BMEII0334
  Mlo:  mll1022_3 mll1835 mll1962 mll2000_3 mll2073 mll2208 mll2209
        mll2569 mll2645 mll3276_3 mll4049_3 mll4650_3 mll4655_3 mll5190_2
        mll9515_2 mlr1023_3 mlr1170_2 mlr2019_3 mlr2793_2 mlr3120 mlr3277_3
        mlr3815 mlr4028 mlr6325 mlr6692 mlr7075_3 mlr7432 mlr8130
        mlr8765 mlr9290
  Ccr:  CC0119_1 CC0410 CC0575_2 CC1335 CC1413_2 CC1457 CC2031
        CC2818 CC3128
  Rpr:  RP092_1
  Rco:  RC0122_1 RC1082 RC1366 RC1367
  Ctr:  CT114_2 CT274 CT484 CT576 CT683 CT700 CT862
  Cpn:  CPn0145_2 CPn0287 CPn0423 CPn0602 CPn0693 CPn0811 CPn0840
        CPn1021
  Tpa:  TP0017 TP0067 TP0095 TP0261_2 TP0268 TP0392 TP0460
        TP0468 TP0469 TP0470_1 TP0471 TP0496 TP0622 TP0648
        TP0820 TP0915 TP0920 TP0954 TP0990
  Bbu:  BB0058 BB0106 BB0133 BB0170 BB0171 BB0195 BB0209
        BB0210 BB0261 BB0298 BB0326 BB0459 BB0537 BB0542
        BB0714
_______

[EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
  Afu:  AF1274
  Hbs:  VNG1814G
  Mac:  MA0153 MA2143 MA2463
  Mth:  MTH736 MTH996 MTH997
  Mja:  MJ1378 MJ1381
  Mka:  MK0754 MK0911 MK1666
  Tac:  Ta0791
  Tvo:  TVN0803
  Pya:  PAE0947
  Sso:  SSO0641
  Sce:  YJL130c_2 YJR109c
  Spo:  SPAC22G7.06c_2 SPBC215.08c
  Aae:  aq_1172 aq_2101
  Tma:  TM0557
  Fnu:  FN0422
  Dra:  DR0668
  Cac:  CAC2189 CAC2644
  Cgl:  Cgl1571
  Mtu:  Rv1384
  MtC:  MT1428
  Mle:  ML0536
  Lla:  L198033
  Spy:  SPy0835
  Spn:  SP1275
  Sau:  SA1046
  Lin:  lin1949
  Bsu:  BS_carB BS_pyrAB
  Bha:  BH2536 BH2895
  Syn:  sll0370 slr1616
  Nos:  alr3809
  Eco:  carB
  EcZ:  ZcarB
  Ecs:  ECs0036
  Ype:  YPO0482
  Sty:  STM0067
  Buc:  BU144
  Vch:  VC2389
  Pae:  PA4756
  Pmu:  PM1505
  Xfa:  XF1107
  Nme:  NMB1855
  NmA:  NMA0602
  Rso:  RSc1521
  Hpy:  HP0919
  jHp:  jhp0853
  Cje:  Cj0279
  Atu:  AGc3955
  Sme:  SMb21227 SMc01215
  Bme:  BMEI0522
  Mlo:  mlr2517
  Ccr:  CC2900
_______

[O] COG0459 Chaperonin GroEL (HSP60 family)
  Afu:  AF1451 AF2238
  Hbs:  VNG2096G VNG2226G
  Mac:  MA0086 MA0631 MA0857 MA1682 MA4386 MA4413
  Mth:  MTH218 MTH794
  Mja:  MJ0999
  Mka:  MK1006
  Tac:  Ta0980 Ta1276
  Tvo:  TVN0507 TVN1128
  Pho:  PH0017
  Pab:  PAB2341
  Pya:  PAE2117 PAE3273
  Sso:  SSO0282 SSO0862 SSO3000
  Ape:  APE0907 APE2072
  Sce:  YBR044c YDL143w YDR188w YDR212w YFR019w_2 YIL142w YJL008c
        YJL014w YJL111w YJR064w YLR259c
  Spo:  SPAC12G12.04 SPAC1420.02c SPAC1D4.04 SPBC106.06 SPBC12D12.03 SPBC1A4.08c SPBC25H2.12c
        SPBC337.05c SPBC646.11
  Ecu:  ECU02g0520 ECU03g0220 ECU04g1020 ECU06g0510 ECU06g0990 ECU09g0480 ECU10g0240
        ECU10g0630
  Aae:  aq_2200
  Tma:  TM0506
  Fnu:  FN0675
  Dra:  DR0607
  Cac:  CAC2703
  Cgl:  Cgl0582 Cgl2660
  Mtu:  Rv0440 Rv3417c
  MtC:  MT0456 MT3526
  Mle:  ML0317 ML0381
  Lla:  L198893
  Spy:  SPy2070
  Spn:  SP1906
  Sau:  SA1836
  Lin:  lin2174
  Bsu:  BS_groEL
  Bha:  BH0562
  Syn:  sll0416 slr2076
  Nos:  alr1896 alr3662
  Eco:  groL
  EcZ:  ZmopA
  Ecs:  ECs5124
  Ype:  YPO0351
  Sty:  STM4330
  Buc:  BU019
  Vch:  VC2664 VCA0820
  Pae:  PA4385
  Hin:  HI0543
  Pmu:  PM1107
  Xfa:  XF0615
  Nme:  NMB1972
  NmA:  NMA0473
  Rso:  RSc0642
  Hpy:  HP0010
  jHp:  jhp0008
  Cje:  Cj1221
  Atu:  AGc1220
  Sme:  SMa0124 SMa0744 SMb21566 SMc00913 SMc01758
  Bme:  BMEII1048
  Mlo:  mll2232 mll5810 mll8201 mlr2394 mlr9342
  Ccr:  CC0685
  Rpr:  RP626
  Rco:  RC0968
  Ctr:  CT110 CT604 CT755
  Cpn:  CPn0134 CPn0777 CPn0898
  Tpa:  TP0030
  Bbu:  BB0649
  Mpn:  MPN573
  Mge:  MG392
_______

[E] COG0460 Homoserine dehydrogenase
  Afu:  AF0935
  Hbs:  VNG2650G
  Mac:  MA2572
  Mth:  MTH1232 MTH417
  Mja:  MJ1602
  Mka:  MK1554
  Tac:  Ta1179
  Tvo:  TVN0385
  Pho:  PH1075
  Pab:  PAB0610
  Pya:  PAE2868
  Sso:  SSO0657
  Ape:  APE1144
  Sce:  YJR139c
  Spo:  SPBC776.03
  Aae:  aq_1812
  Tma:  TM0547_1
  Dra:  DR1278
  Cac:  CAC0998
  Cgl:  Cgl1157
  Mtu:  Rv1294
  MtC:  MT1333
  Mle:  ML1129
  Lla:  L0090
  Spn:  SP1361
  Sau:  SA1164
  Lin:  lin2691
  Bsu:  BS_hom
  Bha:  BH1253 BH1737 BH3422
  Syn:  sll0455
  Nos:  all4120
  Eco:  metL_2 thrA_2
  EcZ:  ZmetL_2 ZthrA_2
  Ecs:  ECs0002_2 ECs4869_2
  Ype:  YPO0116_2 YPO0459_2
  Sty:  STM0002_2 STM4101_2
  Buc:  BU194_2
  Vch:  VC2364_2 VC2684_2
  Pae:  PA3736
  Hin:  HI0089_2
  Pmu:  PM0113_2
  Xfa:  XF2225_2
  Nme:  NMB1228
  NmA:  NMA1395
  Rso:  RSc1327
  Hpy:  HP0822
  jHp:  jhp0761
  Cje:  Cj0149c
  Atu:  AGc2919
  Sme:  SMc00293
  Bme:  BMEI0725
  Mlo:  mll0934
  Ccr:  CC1383
_______

[F] COG0461 Orotate phosphoribosyltransferase
  Afu:  AF1741
  Hbs:  VNG2118G
  Mac:  MA3307
  Mth:  MTH1860
  Mja:  MJ1109
  Mka:  MK1072
  Tac:  Ta0056
  Tvo:  TVN0012
  Pho:  PH1128
  Pab:  PAB2430
  Pya:  PAE3264
  Sso:  SSO0615
  Ape:  APE2349
  Sce:  YML106w YMR271c
  Spo:  SPBC725.15
  Aae:  aq_1907
  Tma:  TM0331
  Fnu:  FN0427
  Dra:  DR0447
  Cac:  CAC0027
  Cgl:  Cgl2715
  Mtu:  Rv0382c
  MtC:  MT0395
  Mle:  ML2487
  Lla:  L80411
  Spy:  SPy0901
  Spn:  SP0702
  Sau:  SA1048
  Lin:  lin1945
  Bsu:  BS_pyrE
  Bha:  BH2532
  Syn:  slr0185
  Nos:  alr2945_2 alr5099
  Eco:  pyrE
  EcZ:  ZpyrE
  Ecs:  ECs4517
  Ype:  YPO0045
  Sty:  STM3733
  Buc:  BU559
  Vch:  VC0211
  Pae:  PA5331
  Hin:  HI0272
  Pmu:  PM1877
  Xfa:  XF0153
  Nme:  NMB1874
  NmA:  NMA0582
  Rso:  RSc0139
  Hpy:  HP1257
  jHp:  jhp1178
  Cje:  Cj0233c
  Atu:  AGc704
  Sme:  SMc02165
  Bme:  BMEI1295
  Mlo:  mll5916 mlr7756
  Ccr:  CC1555
  Cpn:  CPn0608
_______

[FE] COG0462 Phosphoribosylpyrophosphate synthetase
  Afu:  AF0589 AF1419
  Hbs:  VNG2203G
  Mac:  MA1167
  Mth:  MTH784
  Mja:  MJ1366
  Mka:  MK1667
  Tac:  Ta0119m
  Tvo:  TVN0197
  Pho:  PH1923
  Pab:  PAB1114
  Pya:  PAE2980
  Sso:  SSO1045
  Ape:  APE1834
  Sce:  YBL068w YER099c YHL011c YKL181w YOL061w
  Spo:  SPAC4A8.14 SPBC3D6.06c SPCC1620.06c
  Aae:  aq_1636
  Tma:  TM1628
  Fnu:  FN1992
  Dra:  DR1456
  Cac:  CAC0819 CAC3221
  Cgl:  Cgl0918
  Mtu:  Rv1017c
  MtC:  MT1045
  Mle:  ML0248
  Lla:  L109335 L25614
  Spy:  SPy0020 SPy1123
  Spn:  SP0027 SP1095
  Sau:  SA0458
  Lin:  lin0238 lin0509
  Bsu:  BS_prs
  Bha:  BH0066
  Syn:  sll0469
  Nos:  alr4670
  Eco:  prsA
  EcZ:  ZprsA
  Ecs:  ECs1712
  Ype:  YPO2013
  Sty:  STM1780
  Buc:  BU169
  Vch:  VC2183
  Pae:  PA4670
  Hin:  HI1609
  Pmu:  PM0244
  Xfa:  XF2644
  Nme:  NMB0875
  NmA:  NMA1093
  Rso:  RSc0202 RSc0395
  Hpy:  HP0742
  jHp:  jhp0679
  Cje:  Cj0918c
  Atu:  AGc4031
  Sme:  SMc02686
  Bme:  BMEI0483
  Mlo:  mlr2685
  Ccr:  CC0487
  Rco:  RC0125 RC0126
  Tpa:  TP0294
  Bbu:  BB0544
  Uur:  UU193
  Mpu:  MYPU_1270
  Mpn:  MPN073
  Mge:  MG058
_______

[M] COG0463 Glycosyltransferases involved in cell wall biogenesis
  Afu:  AF0039 AF0328 AF0387 AF0581_1 AF0599 AF0620
  Hbs:  VNG0271C VNG0296H VNG0318G_1 VNG0919G VNG1053G VNG1062G VNG1066C
        VNG1067G VNG2065G
  Mac:  MA1068 MA1184 MA1187 MA2169 MA2465 MA3868 MA4077_1
        MA4330 MA4446 MA4453
  Mth:  MTH136 MTH1392 MTH331 MTH374 MTH377 MTH884_1
  Mja:  MJ0544 MJ1057 MJ1222
  Mka:  MK0565 MK0880 MK1381
  Tac:  Ta0153 Ta0706 Ta0710 Ta0760 Ta1048 Ta1473
  Tvo:  TVN0095 TVN0223 TVN0547 TVN0854 TVN0862 TVN0871 TVN0876
        TVN0884 TVN0892 TVN0904
  Pho:  PH0051_1 PH0396 PH0401 PH0430 PH0433 PH1585 PH1596
        PH1879
  Pab:  PAB0772 PAB0796 PAB1210 PAB1411 PAB1587 PAB1971 PAB1981
        PAB2307_1
  Pya:  PAE0437 PAE0439 PAE0441 PAE0446 PAE0544 PAE1555_1
  Sso:  SSO0680 SSO0808 SSO0820 SSO0827 SSO1290 SSO1357 SSO1954
        SSO3241
  Ape:  APE0426_1 APE1189m APE1192
  Sce:  YPL227c YPR183w
  Spo:  SPAC31G5.16c SPBC56F2.10c
  Ecu:  ECU04g1060
  Aae:  aq_1742 aq_1899
  Tma:  TM0756_4 TM0757_1 TM1229
  Fnu:  FN0542 FN1094 FN1243 FN1692
  Dra:  DR0089 DR1080 DR1224 DRA0037 DRA0287
  Cac:  CAC0194 CAC0795 CAC1488 CAC1614 CAC1615 CAC1653 CAC2173
        CAC2174 CAC2175 CAC2176 CAC2324 CAC2345 CAC2346 CAC2348
        CAC2351 CAC2404 CAC2408 CAC2522 CAC2588 CAC3308_1 CAC3661
  Cgl:  Cgl0325 Cgl0353 Cgl0359 Cgl0614 Cgl1088 Cgl1444 Cgl2411
  Mtu:  Rv0539 Rv0696 Rv1208 Rv1500 Rv1514c Rv1516c Rv1518
        Rv1520 Rv2051c_2 Rv2957 Rv3631
  MtC:  MT0564 MT0723 MT1246 MT1549 MT1564 MT1566 MT1568
        MT1570 MT2111_2 MT3031 MT3733
  Mle:  ML0207 ML1064 ML1440
  Lla:  L109453 L11285 L141091_1 L16653 L17695 L2599 L29089
        L6907 L83097
  Spy:  SPy0510 SPy0540 SPy0787 SPy0791 SPy0794
  Spn:  SP0102 SP0136 SP0907_1 SP1365 SP1606 SP1764 SP1771_1
  Sau:  SA0248 SA0596 SA0659 SA1808 SA2350
  Lin:  lin0696 lin1066 lin1068_1 lin1073 lin2695
  Bsu:  BS_cgeD BS_csbB BS_ggaA BS_ggaB_1 BS_spsA BS_tuaG BS_yfnE
        BS_ykcC BS_ykoT BS_yolJ BS_yveO BS_yveR BS_yveT BS_ywdF
  Bha:  BH2769 BH3367 BH3373 BH3657_1 BH3658_1 BH3661 BH3713
        BH3714
  Syn:  sll0501 sll1004 sll1020 sll1457 sll1528_2 sll1540_1 sll1664
        sll1995 slr0092 slr0626_1 slr1063_1 slr1065 slr1070 slr1537
        slr1566 slr1943 slr2116 slr2120
  Nos:  all0042 all0143 all0914 all0915 all1737 all1762 all1766
        all1767 all1768 all1886 all2288 all2289 all2770_1 all4126_1
        all4431 all4441 all4793 all4857_1 all5102 all5118 alr0074
        alr0557_1 alr0558_1 alr0776 alr2408 alr2828 alr2836 alr2837
        alr2840 alr2866 alr3062 alr3063 alr3067 alr3068 alr3070
        alr3071 alr3073 alr3176 alr3177 alr3380 alr4487_2 alr4492
        alr5240 alr7551
  Eco:  wcaA wcaE yfbF yfdH yibD
  EcZ:  Z3512 Z4858_1 ZwbdN ZwbdO ZwcaA ZwcaE ZyibD
  Ecs:  ECs2843 ECs2845 ECs2860 ECs2864 ECs3142 ECs4333_1 ECs4493
  Ype:  YPO0054 YPO0187 YPO2421 YPO3098
  Sty:  STM0558 STM0725 STM2085 STM2087 STM2111 STM2115 STM2298
        STM3707 STM4205
  Vch:  VC0224
  Pae:  PA0705 PA1014 PA1091_2 PA1388 PA1390 PA2233 PA3553
        PA4819 PA5000
  Hin:  HI0653 HI0868 HI1578 HI1695 HI1696
  Pmu:  PM0414 PM0511 PM0512 PM0775 PM0777 PM1140 PM1306
        PM1562
  Xfa:  XF0176 XF0612 XF1638 XF1994 XF2278
  Nme:  NMB1704 NMB1929
  NmA:  NMA0524 NMA0832 NMA1958
  Rso:  RSc0436 RSc1321 RSc2201 RSc2202 RSc2203 RSp0366_1 RSp0387
  Hpy:  HP0102
  jHp:  jhp0094
  Cje:  Cj1128c Cj1135 Cj1136 Cj1138 Cj1139c Cj1146c Cj1434c
        Cj1438c_1 Cj1440c
  Atu:  AGc1311 AGc4038 AGc4307 AGc4308 AGl153 AGl1590 AGl1595
        AGl1604 AGl1606 AGl1609 AGl534gl_1 AGl540_2
  Sme:  SMb20563 SMb20748 SMb20948 SMb20957 SMb20958 SMb20959 SMb21066
        SMb21074 SMb21189 SMb21190 SMb21320_1 SMb21500 SMb21690 SMc00865
        SMc01222 SMc02384 SMc03058 SMc04185
  Bme:  BMEI1037 BMEI1540 BMEII0837 BMEII0840 BMEII1101 BMEII1128
  Mlo:  mll0582_1 mll0583 mll3089 mll3280_1 mll5318 mll5672 mll6500
        mll7088 mll8554 mlr0009 mlr1944 mlr1946 mlr2557 mlr4737
        mlr5261 mlr5272 mlr5273 mlr5274 mlr7341_2 mlr7556 mlr7566
        mlr9727
  Ccr:  CC0469 CC1331 CC2277 CC2427 CC2889
  Rpr:  RP218 RP339 RP446
  Rco:  RC0292 RC0461 RC0623
  Bbu:  BB0572
  Uur:  UU503
  Mpu:  MYPU_7700
  Mpn:  MPN028 MPN075 MPN483
  Mge:  MG025 MG060 MG335.2
_______

[O] COG0464 ATPases of the AAA+ class
  Afu:  AF0477 AF1297 AF2098
  Hbs:  VNG1462G VNG1472G VNG1654G VNG1667G VNG2062G VNG6199G
  Mac:  MA1813 MA2066 MA3527 MA4064 MA4575
  Mth:  MTH1639
  Mja:  MJ1156
  Mka:  MK0486_1 MK0486_3
  Tac:  Ta0840 Ta1175
  Tvo:  TVN0382 TVN0947
  Pho:  PH0687 PH1278 PH1840
  Pab:  PAB1478 PAB1789 PAB2086
  Pya:  PAE0696 PAE3171
  Sso:  SSO0176 SSO0421 SSO0909 SSO2420 SSO2831
  Ape:  APE0960 APE1367 APE2474
  Sce:  YBR080c YBR186w YDL126c YER047c YGR028w YGR270w YKL197c
        YLL034c YLR397c YNL329c YPL074w YPR173c
  Spo:  SPAC1565.08 SPAC17A5.01 SPAC1834.11c SPAC2G11.06 SPAC31G5.19 SPAC328.04 SPBC16E9.10c
        SPBC56F2.07c SPBC947.01 SPBP22H7.05c SPCC24B10.10c SPCC553.03
  Ecu:  ECU01g1230 ECU03g1410 ECU05g1140 ECU11g0840 ECU11g1030
  Dra:  DR0647
  Cgl:  Cgl1461
  Mtu:  Rv0282_2 Rv0435c Rv1798_2 Rv2115c Rv3868_2 Rv3884c_2
  MtC:  MT0295_2 MT0451 MT1847_2 MT2175 MT3981_2 MT3999_2
  Mle:  ML0055_2 ML1316 ML1536_2 ML2537_2
  Bsu:  BS_spoVK
  Bha:  BH2289 BH2363
  Syn:  slr0374 slr0480
  Nos:  all1872 all2243 all3141 all4233 all4296 alr7046 alr7200
        alr7528 alr8015
  Pae:  PA0657
  Rso:  RSc1961
  Cje:  Cj0377
  Atu:  AGpT158
  Sme:  SMb20196 SMc02733
  Mlo:  mlr2758 mlr6544
_______

[O] COG0465 ATP-dependent Zn proteases
  Sce:  YDR375c YER017c YMR089c YPR024w
  Spo:  SPAC644.07 SPBC543.09 SPCC965.04c
  Aae:  aq_936
  Tma:  TM0580
  Fnu:  FN1978
  Dra:  DR0583 DR1020 DRA0290
  Cac:  CAC0602 CAC0955 CAC3202
  Cgl:  Cgl2640
  Mtu:  Rv3610c
  MtC:  MT3714
  Mle:  ML0222
  Lla:  L0204
  Spy:  SPy0015
  Spn:  SP0013
  Sau:  SA0469
  Lin:  lin0252
  Bsu:  BS_ftsH BS_yjoB
  Bha:  BH0085
  Syn:  sll1463 slr0228 slr1390 slr1604
  Nos:  all0263 all3642 all4776 all4936 alr1261
  Eco:  hflB
  EcZ:  ZhflB
  Ecs:  ECs4057
  Ype:  YPO3502
  Sty:  STM3296
  Buc:  BU382
  Vch:  VC0637
  Pae:  PA4751
  Hin:  HI1335 HI1465
  Pmu:  PM0438
  Xfa:  XF0093
  Nme:  NMB0798
  NmA:  NMA1007
  Rso:  RSc1526
  Hpy:  HP0286 HP1069
  jHp:  jhp0271 jhp0356
  Cje:  Cj1005c Cj1116c
  Atu:  AGl2253
  Sme:  SMc04459
  Bme:  BMEI0343
  Mlo:  mll3882
  Ccr:  CC3226
  Rpr:  RP043
  Rco:  RC0068
  Ctr:  CT841
  Cpn:  CPn0998
  Tpa:  TP0330 TP0765
  Bbu:  BB0789
  Uur:  UU105
  Mpu:  MYPU_7790
  Mpn:  MPN671
  Mge:  MG457
_______

[O] COG0466 ATP-dependent Lon protease, bacterial type
  Mac:  MA1862
  Sce:  YBL022c
  Spo:  SPAC22F3.06c
  Aae:  aq_242
  Tma:  TM1633
  Fnu:  FN2014
  Dra:  DR0349 DR1974
  Cac:  CAC0456 CAC2637
  Bsu:  BS_lonA
  Bha:  BH3050
  Eco:  lon
  EcZ:  Zlon
  Ecs:  ECs0493
  Ype:  YPO3155
  Sty:  STM0450
  Buc:  BU477
  Vch:  VC1920
  Pae:  PA0779 PA1803
  Hin:  HI0462
  Pmu:  PM1978
  Xfa:  XF1189
  Nme:  NMB1231
  NmA:  NMA1398
  Rso:  RSc1713
  Hpy:  HP1379
  jHp:  jhp1293
  Cje:  Cj1073c
  Atu:  AGc2329
  Sme:  SMc01905
  Bme:  BMEI0876
  Mlo:  mlr8476
  Ccr:  CC1960
  Rpr:  RP450
  Rco:  RC0629
  Ctr:  CT344
  Cpn:  CPn0027
  Tpa:  TP0524
  Bbu:  BB0253 BB0613
  Uur:  UU348
  Mpu:  MYPU_5190
  Mpn:  MPN332
  Mge:  MG239
_______

[T] COG0467 RecA-superfamily ATPases implicated in signal transduction
  Afu:  AF0351 AF0354 AF0452 AF0518 AF0775 AF0795 AF1172
        AF1443 AF1484
  Hbs:  VNG1899G VNG6028G VNG6240G VNG7024
  Mac:  MA0235 MA2444 MA2446 MA3099 MA3974
  Mth:  MTH1094 MTH1498 MTH439 MTH592 MTH593 MTH594_1
  Mja:  MJ1359
  Mka:  MK0039 MK0556
  Tac:  Ta0084 Ta0953m
  Tvo:  TVN0169 TVN1098
  Pho:  PH0186 PH0187 PH0284 PH0833 PH1025 PH1120
  Pab:  PAB0112 PAB0113 PAB0642 PAB0737 PAB2180
  Pya:  PAE0320 PAE0729 PAE1085 PAE1156 PAE1557 PAE2044 PAE2048
        PAE2799 PAE3057 PAE3143 PAE3364
  Sso:  SSO1861 SSO2452
  Ape:  APE0745_1 APE0745_3 APE1505
  Sce:  YDR076w
  Aae:  aq_204
  Tma:  TM0370
  Syn:  sll1595 slr0758 slr1942
  Nos:  alr2886
  Atu:  AGpA129 AGpA757
  Sme:  SMa2061
  Mlo:  mlr8082 mlr9679
_______

[L] COG0468 RecA/RadA recombinase
  Afu:  AF0993 AF2096
  Hbs:  VNG1665G VNG1711G_1 VNG2473G
  Mac:  MA0074 MA3545
  Mth:  MTH1383 MTH1693
  Mja:  MJ0254 MJ0869
  Mka:  MK1032 MK1442
  Tac:  Ta1036 Ta1104
  Tvo:  TVN0457 TVN0559
  Pho:  PH0119 PH0263_1 PH0263_3
  Pab:  PAB0164 PAB2270
  Pya:  PAE0654 PAE3238
  Sso:  SSO0250
  Ape:  APE0119
  Sce:  YDR004w YER095w YER179w
  Spo:  SPAC20H4.07 SPAC3C7.03c SPAC644.14c SPAC8E11.03c
  Ecu:  ECU11g0820
  Aae:  aq_2150
  Tma:  TM1859
  Fnu:  FN0547
  Dra:  DR2340
  Cac:  CAC1815
  Cgl:  Cgl1910
  Mtu:  Rv2737c_1 Rv2737c_3
  MtC:  MT2806_1 MT2806_3
  Mle:  ML0987_1 ML0987_3
  Lla:  L0260
  Spy:  SPy2116
  Spn:  SP1940
  Sau:  SA1128
  Lin:  lin1435
  Bsu:  BS_recA
  Bha:  BH2383
  Syn:  sll0569
  Nos:  all3272
  Eco:  recA
  EcZ:  ZrecA
  Ecs:  ECs3556
  Ype:  YPMT1.50c YPO3307
  Sty:  STM2829
  Vch:  VC0543
  Pae:  PA3617
  Hin:  HI0600
  Pmu:  PM1817
  Xfa:  XF0123
  Nme:  NMB1445
  NmA:  NMA1658
  Rso:  RSc0551
  Hpy:  HP0153
  jHp:  jhp0141
  Cje:  Cj1673c
  Atu:  AGc3441
  Sme:  SMc00760
  Bme:  BMEI0787
  Mlo:  mlr0030
  Ccr:  CC1087
  Rpr:  RP761
  Rco:  RC1182
  Ctr:  CT650
  Cpn:  CPn0762
  Tpa:  TP0692
  Bbu:  BB0131
  Uur:  UU084
  Mpu:  MYPU_2520
  Mpn:  MPN490
  Mge:  MG339
_______

[G] COG0469 Pyruvate kinase
  Hbs:  VNG0324G_1
  Mac:  MA3890
  Mja:  MJ0108
  Tac:  Ta0896
  Tvo:  TVN1020
  Pho:  PH0570
  Pab:  PAB1441
  Pya:  PAE0819
  Sso:  SSO0981
  Ape:  APE0489
  Sce:  YAL038w YOR347c
  Spo:  SPAC4H3.10c
  Ecu:  ECU09g0640
  Tma:  TM0208
  Fnu:  FN1765
  Dra:  DR2635
  Cac:  CAC0518 CAC1036
  Cgl:  Cgl2036 Cgl2847
  Mtu:  Rv1617
  MtC:  MT1653
  Mle:  ML1277
  Lla:  L0003
  Spy:  SPy1282
  Spn:  SP0897
  Sau:  SA1520_1
  Lin:  lin1605_1
  Bsu:  BS_pykA_1
  Bha:  BH3163_1
  Syn:  sll0587 sll1275_1
  Nos:  all2564 all4008_1
  Eco:  pykA pykF
  EcZ:  ZpykA ZpykF
  Ecs:  ECs2383 ECs2564
  Ype:  YPO2064 YPO2393
  Sty:  STM1378 STM1888
  Buc:  BU319
  Vch:  VC0485 VC2008 VCA0708
  Pae:  PA1498 PA4329
  Hin:  HI1573
  Pmu:  PM0653
  Xfa:  XF0824
  Nme:  NMB0089
  NmA:  NMA0177
  Rso:  RSc0572 RSp1448
  Cje:  Cj0392c
  Atu:  AGl2146
  Sme:  SMc04005
  Bme:  BMEI0292
  Mlo:  mll3819
  Ccr:  CC2051
  Ctr:  CT332
  Cpn:  CPn0097
  Bbu:  BB0348
  Uur:  UU186
  Mpu:  MYPU_2400
  Mpn:  MPN303
  Mge:  MG216
_______

[L] COG0470 ATPase involved in DNA replication
  Afu:  AF1195 AF2060
  Hbs:  VNG1622G VNG2240G VNG2280G
  Mac:  MA0140 MA0669 MA1810
  Mth:  MTH240 MTH241
  Mja:  MJ0884 MJ1422_1 MJ1422_3 MJ1422_5 MJ1422_7
  Mka:  MK0005 MK0006_1 MK0006_3
  Tac:  Ta1285 Ta1500m
  Tvo:  TVN0534 TVN1491
  Pho:  PH0112_1 PH0112_3 PH0113
  Pab:  PAB0068_1 PAB0068_3 PAB0068_5 PAB0069
  Pya:  PAE0734 PAE0735 PAE1646
  Sso:  SSO0768 SSO0769
  Ape:  APE1522 APE1524
  Sce:  YBR087w YER173w YJR068w YMR078c YNL290w YOL094c YOR144c
        YOR217w_2
  Spo:  SPAC14C4.13 SPAC1687.03c SPAC23D3.02 SPAC27E2.10c SPAPJ698.01c SPBC23E6.07c_2 SPBC83.14c
        SPBC902.02c SPBC947.11c
  Ecu:  ECU01g1180 ECU02g0290 ECU02g0680 ECU05g1530_2 ECU09g1330 ECU10g0780i
  Aae:  aq_1526
  Tma:  TM0771
  Fnu:  FN1576
  Dra:  DR2332
  Cgl:  Cgl0312
  Mtu:  Rv3644c
  MtC:  MT3747
  Mle:  ML0202
  Lla:  L0280
  Spy:  SPy0400
  Spn:  SP0936
  Sau:  SA0442
  Lin:  lin0205
  Bsu:  BS_holB
  Bha:  BH0044
  Syn:  slr0446
  Nos:  all4705 alr7575
  Eco:  holB
  EcZ:  ZholB
  Ecs:  ECs1477
  Ype:  YPO1606
  Sty:  STM1201
  Buc:  BU354
  Vch:  VC2015
  Pae:  PA2961
  Hin:  HI0455
  Pmu:  PM1674
  Xfa:  XF0676
  Nme:  NMB0769
  NmA:  NMA0980
  Rso:  RSc1785
  Hpy:  HP1231
  jHp:  jhp1152
  Cje:  Cj0584
  Atu:  AGc2759
  Sme:  SMc01190
  Bme:  BMEI0988
  Mlo:  mll0423
  Ccr:  CC1823
  Rpr:  RP172
  Rco:  RC0213
  Ctr:  CT187
  Cpn:  CPn0272
  Tpa:  TP0521
  Uur:  UU019
  Mpu:  MYPU_0530
  Mpn:  MPN007
  Mge:  MG007
_______

[P] COG0471 Di- and tricarboxylate transporters
  Hbs:  VNG2602G
  Mth:  MTH788
  Mja:  MJ0456 MJ0672
  Mka:  MK1386
  Pho:  PH0816
  Pab:  PAB0325
  Pya:  PAE3063
  Sce:  YCR037c_2 YJL198w_2 YNR013c_2
  Spo:  SPBC3B8.04c_2
  Aae:  aq_031
  Dra:  DR1411
  Cac:  CAC1590
  Cgl:  Cgl0226 Cgl1846 Cgl1997
  Lla:  L20481
  Spy:  SPy0196
  Spn:  SP2017
  Sau:  SA0645 SA1732 SA2486
  Bsu:  BS_yflS
  Bha:  BH3327 BH3384
  Syn:  sll0640
  Eco:  citT ybhI ybiR yfbS ygjE
  EcZ:  ZybdS ZybhI ZybiR ZyfbS ZygjE
  Ecs:  ECs0651 ECs0798 ECs0895 ECs3176 ECs3946
  Ype:  YPO0081 YPO0759 YPO2561
  Sty:  STM0618 STM0765 STM0836 STM2333 STM3166 STM3356
  Vch:  VC0338 VC1314 VCA0025
  Pae:  PA3839
  Hin:  HI0020 HI0608
  Pmu:  PM1167 PM1585 PM1999
  Xfa:  XF0785
  Nme:  NMB0470 NMB0792
  NmA:  NMA1003 NMA2015
  Rso:  RSp0802
  Hpy:  HP0214
  jHp:  jhp0131 jhp0200
  Cje:  Cj0555
  Atu:  AGl788
  Sme:  SMa1916 SMc04179
  Bme:  BMEII0620
  Ctr:  CT204
  Cpn:  CPn0207
_______

[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
  Mth:  MTH590 MTH735
  Mja:  MJ1113
  Mka:  MK0753
  Pho:  PH0348
  Pab:  PAB1288
  Pya:  PAE3488
  Sso:  SSO0060
  Sce:  YBR243c
  Spo:  SPBC15D4.04
  Aae:  aq_053 aq_519
  Tma:  TM0235 TM0805 TM1549
  Fnu:  FN1459
  Dra:  DR1562 DR1835
  Cac:  CAC2127 CAC2875
  Cgl:  Cgl1177 Cgl2111
  Mtu:  Rv1302 Rv2156c
  MtC:  MT1341 MT2215
  Mle:  ML0911 ML1137
  Lla:  L35751 L91444
  Spy:  SPy0282 SPy1662
  Spn:  SP0337
  Sau:  SA0702 SA1025
  Lin:  lin0958 lin2143 lin2663
  Bsu:  BS_mraY BS_tagO
  Bha:  BH2568 BH2569
  Syn:  sll0648 sll0657
  Nos:  all1895 all4316 alr4807
  Eco:  mraY rfe
  EcZ:  ZmraY Zrfe
  Ecs:  ECs0091 ECs4717
  Ype:  YPO0552 YPO3866
  Sty:  STM0125 STM3918
  Buc:  BU219
  Vch:  VC2404
  Pae:  PA3145 PA4415
  Hin:  HI1135 HI1716
  Pmu:  PM0139 PM0463
  Xfa:  XF0795 XF2434
  Nme:  NMB0418
  NmA:  NMA2066
  Rso:  RSc0689 RSc2847
  Hpy:  HP0493 HP1581
  jHp:  jhp0445 jhp1488
  Cje:  Cj0433c
  Atu:  AGc3805 AGl145
  Sme:  SMc01863
  Bme:  BMEI0576 BMEI1426 BMEII0839
  Mlo:  mll1558
  Rpr:  RP595 RP825
  Rco:  RC0910 RC1279
  Ctr:  CT757
  Cpn:  CPn0900
  Tpa:  TP0345
  Bbu:  BB0303
_______

[CE] COG0473 Isocitrate/isopropylmalate dehydrogenase
  Afu:  AF0628
  Mac:  MA0201 MA3748 MA4265
  Mth:  MTH1388 MTH184
  Mja:  MJ0720 MJ1596
  Mka:  MK0782 MK1215
  Pho:  PH1722
  Pab:  PAB0289 PAB2424
  Pya:  PAE1995
  Sso:  SSO0723
  Sce:  YCL018w YIL094c YNL037c YOR136w
  Spo:  SPAC11G7.03 SPAC31G5.04 SPBC1A4.02c SPBC902.05c
  Aae:  aq_244
  Tma:  TM0556
  Dra:  DR1674 DR1785
  Cac:  CAC0972 CAC3171
  Cgl:  Cgl1256
  Mtu:  Rv2995c
  MtC:  MT3073
  Mle:  ML1691
  Lla:  L0074
  Sau:  SA1863
  Lin:  lin2095
  Bsu:  BS_leuB BS_ycsA
  Bha:  BH1070 BH3057
  Syn:  slr1517
  Nos:  alr1313
  Eco:  leuB yeaU
  EcZ:  ZleuB ZyeaU
  Ecs:  ECs0077 ECs2509
  Ype:  YPO0532 YPO2496
  Sty:  STM0112
  Buc:  BUpL05
  Vch:  VC2491
  Pae:  PA3118
  Hin:  HI0987
  Pmu:  PM1961
  Xfa:  XF2372 XF2596
  Nme:  NMB1031
  NmA:  NMA1456
  Rso:  RSc1988 RSp0329 RSp0996 RSp1612
  Cje:  Cj1718c
  Atu:  AGc5067 AGl2841
  Sme:  SMa1846 SMc04405
  Bme:  BMEII0404
  Mlo:  mll4399 mll7044
  Ccr:  CC0193
  Rpr:  RP265
  Rco:  RC0353
_______

[P] COG0474 Cation transport ATPase
  Mac:  MA1678 MA2501 MA2833 MA4082 MA4378
  Mth:  MTH1001 MTH1516 MTH481 MTH482
  Mja:  MJ1226
  Tac:  Ta1045
  Sce:  YAL026c YDR038c YDR039c YDR040c YDR093w YEL031w YER166w
        YGL006w YGL008c YGL167c YIL048w YMR162c YOR291w YPL036w
  Spo:  SPAC1071.10c SPAC24B11.12c SPAC29A4.19c SPAC4F10.16c SPAC6C3.06c SPAC821.13c SPACUNK4.07c
        SPAPB2B4.04c SPBC31E1.02c SPBC839.06 SPBC887.12 SPCC1020.01c SPCC1672.11c
  Ecu:  ECU02g0330 ECU06g0930 ECU07g1500 ECU09g1440
  Aae:  aq_724
  Fnu:  FN1022
  Cac:  CAC1269 CAC2137
  Cgl:  Cgl1510
  Mtu:  Rv0107c Rv0425c Rv0908 Rv1997
  MtC:  MT0116 MT0440 MT0931 MT2053
  Mle:  ML2671
  Lla:  L117821 L168650 L2866 L76107 L85514
  Spy:  SPy0623
  Spn:  SP1551 SP1623
  Lin:  lin0814 lin0832 lin2836
  Bsu:  BS_yloB
  Bha:  BH2515
  Syn:  sll0672 sll1076 sll1614 slr0822
  Nos:  all3245 all3375 alr1715_1 alr3723
  Eco:  mgtA
  EcZ:  ZmgtA
  Ecs:  ECs5219
  Ype:  YPO0451 YPO1661
  Sty:  STM3763 STM4456
  Pae:  PA1429 PA4825
  Sme:  SMa1155
  Bme:  BMEII0056
  Mlo:  mlr6609
  Uur:  UU264
  Mpu:  MYPU_1550
  Mpn:  MPN209
  Mge:  MG071
_______

[P] COG0475 Kef-type K+ transport systems, membrane components
  Afu:  AF0217 AF1245
  Mac:  MA3108_1 MA3981_1 MA4083
  Mth:  MTH358_1
  Mja:  MJ1275
  Tac:  Ta1185m
  Tvo:  TVN0393
  Pho:  PH0136 PH0302 PH0934 PH1594
  Pab:  PAB0084 PAB0390 PAB0809 PAB1247
  Pya:  PAE2319
  Sso:  SSO0376_1 SSO1138 SSO2965
  Ape:  APE2426
  Sce:  YJL094c
  Spo:  SPAC105.01c
  Aae:  aq_2030 aq_415 aq_929
  Dra:  DR1149 DR2367_1
  Cac:  CAC0444
  Mtu:  Rv3236c
  MtC:  MT3333
  Mle:  ML0782
  Lla:  L176399
  Sau:  SA0868_1
  Lin:  pli0079
  Bsu:  BS_yhaU BS_yjbQ_1
  Bha:  BH2844_1
  Syn:  sll0689 slr0415_1 slr1595
  Nos:  all1303 all3534_1 all3567_1 alr0091 alr0656_1 alr2046_1
  Eco:  kefB_1 kefC_1
  EcZ:  ZkefB_1 ZkefC_1
  Ecs:  ECs0050_1 ECs4201_1
  Ype:  YPO0191_1
  Sty:  STM0086_1 STM3457_1
  Vch:  VC2606_1
  Pae:  PA1207_1 PA5529
  Hin:  HI0911_1
  Xfa:  XF1398
  Nme:  NMB0209_1
  NmA:  NMA0060_1
  Rso:  RSc0414_1 RSc3096_1
  Hpy:  HP0471 HP1183
  jHp:  jhp0423 jhp1109
  Cje:  Cj1231_1 Cj1684c
  Atu:  AGc1246_1 AGc3111_1
  Sme:  SMb21555_1 SMc00898_1
  Bme:  BMEII1034_1
  Mlo:  mlr0783_1 mlr2268_1
  Ccr:  CC0204_1 CC1500 CC3496_1
  Rpr:  RP810_1
  Rco:  RC1252_1
  Bbu:  BB0447_1
_______

[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
  Afu:  AF0531 AF0553
  Hbs:  VNG0084G
  Mac:  MA0255
  Mth:  MTH1571
  Tac:  Ta0844
  Tvo:  TVN0943
  Pho:  PH0056
  Pab:  PAB2302
  Pya:  PAE1056
  Sso:  SSO0298
  Ape:  APE1594
  Sce:  YDR390c YHR111w_1 YHR171w YKL210w YPL003w YPR066w YPR180w
  Spo:  SPAC24H6.12c SPAC2G11.10c_1 SPAC323.06c SPAC4C5.04 SPBC16H5.03c SPBC211.09 SPBC6B1.05c
  Ecu:  ECU02g1340 ECU03g0930 ECU03g1290_1 ECU09g0860
  Aae:  aq_1329
  Fnu:  FN1755
  Dra:  DR2269
  Cac:  CAC2923
  Cgl:  Cgl0209_1 Cgl1994_1
  Mtu:  Rv1355c_1 Rv2338c Rv3116_1 Rv3206c_1
  MtC:  MT1398_1 MT2401 MT3198_1 MT3301_1
  Mle:  ML0817_1 ML1751_1
  Spn:  SP0695
  Sau:  SA2071
  Lin:  lin1041
  Bsu:  BS_moeB BS_yjbU
  Bha:  BH1419
  Syn:  sll1536_1
  Nos:  all1432 all2906_1 alr7504
  Eco:  moeB thiF
  EcZ:  ZmoeB ZthiF
  Ecs:  ECs0904 ECs4915
  Ype:  YPO1494 YPO3741
  Sty:  STM0845 STM4162
  Vch:  VC0063 VCA0618
  Pae:  PA2103_1 PA4663
  Hin:  HI1449
  Pmu:  PM0695
  Xfa:  XF0466_2
  Nme:  NMB2062
  NmA:  NMA0373
  Rso:  RSc0351
  Hpy:  HP0814
  jHp:  jhp0750
  Cje:  Cj1046c
  Atu:  AGc111
  Sme:  SMc02864
  Bme:  BMEI1940
  Mlo:  mll5577 mll6192_2 mlr6140
  Ccr:  CC3726
_______

[GEPR] COG0477 Permeases of the major facilitator superfamily
  Afu:  AF0008 AF0013 AF0025 AF0367 AF0907 AF1144 AF1325
        AF1541 AF2014 AF2102 AF2103 AF2258 AF2294 AF2309
  Hbs:  VNG0157G VNG0188H VNG0270C VNG0427G VNG0501G VNG1687C VNG2231C
        VNG2419C VNG2429G VNG6068C VNG6457C VNG7051 VNG7158
  Mac:  MA0169 MA0181 MA0185 MA0615 MA1161 MA1346 MA1516
        MA1592 MA1657 MA1858 MA2263 MA2503 MA3371 MA3881
        MA3882 MA4166 MA4621 MA4644 MA4663
  Mth:  MTH104 MTH195 MTH761
  Mja:  MJ1317 MJ1560
  Mka:  MK1128 MK1135 MK1569
  Tac:  Ta0048 Ta0137 Ta0141 Ta0149 Ta0154 Ta0156 Ta0186
        Ta0197 Ta0210 Ta0224 Ta0252 Ta0334 Ta0348 Ta0373
        Ta0410 Ta0442 Ta0452 Ta0511 Ta0581 Ta0610 Ta0683
        Ta0692 Ta0746 Ta0775 Ta0782 Ta0793 Ta0914 Ta0933
        Ta1024 Ta1034 Ta1062 Ta1069 Ta1085 Ta1165 Ta1187
        Ta1188 Ta1287 Ta1333 Ta1340 Ta1345 Ta1346 Ta1373
        Ta1377 Ta1379 Ta1391 Ta1404 Ta1405 Ta1406m Ta1469
  Tvo:  TVN0005 TVN0070 TVN0123 TVN0138 TVN0176 TVN0216 TVN0219
        TVN0224 TVN0226 TVN0246 TVN0250 TVN0255 TVN0256 TVN0303
        TVN0394 TVN0436 TVN0490 TVN0517 TVN0524 TVN0561 TVN0594
        TVN0661 TVN0721 TVN0801 TVN0810 TVN0822 TVN0844 TVN0894
        TVN0907 TVN1043 TVN1053 TVN1060 TVN1078 TVN1160 TVN1163
        TVN1169 TVN1245 TVN1263 TVN1342 TVN1363 TVN1364 TVN1365
        TVN1366 TVN1384 TVN1396 TVN1407 TVN1419 TVN1425
  Pho:  PH0153 PH0230 PH0233 PH0367 PH0667 PH0695 PH0700
        PH0718 PH0772 PH0894 PH1098 PH1260
  Pab:  PAB0146 PAB0582 PAB0724 PAB0754 PAB0761 PAB0874 PAB0885
        PAB0913 PAB1450 PAB1524 PAB2174 PAB2175 PAB2211 PAB2250
  Pya:  PAE0176 PAE1049 PAE1550 PAE2306 PAE2330 PAE2376 PAE2385
        PAE2385a PAE2559 PAE2767 PAE2866_1 PAE2925 PAE3357 PAE3359
  Sso:  SSO0290 SSO0337 SSO0548 SSO0992 SSO1103 SSO1140 SSO1142
        SSO1146 SSO1147 SSO1162 SSO1183 SSO1305 SSO1338 SSO1351
        SSO1361 SSO1505 SSO1535 SSO1539 SSO1593 SSO1773 SSO1863
        SSO1890 SSO1909 SSO1958 SSO2035 SSO2039 SSO2047 SSO2057
        SSO2074 SSO2111 SSO2127 SSO2134 SSO2220 SSO2288 SSO2338
        SSO2505 SSO2516 SSO2528 SSO2558 SSO2701 SSO2704 SSO2716
        SSO2718 SSO2746 SSO2852 SSO2853 SSO2856 SSO2938 SSO2955
        SSO3010 SSO3017 SSO3079 SSO3120 SSO3121 SSO3129 SSO3143
        SSO3147 SSO3149 SSO3180 SSO7348
  Ape:  APE0031 APE0184 APE0671 APE1914 APE2269 APE2466 APE2615
  Sce:  YAL067c YBR008c YBR043c YBR180w YBR219c YBR220c YBR241c
        YBR293w YBR298c YCL069w YCL073c YCR023c YCR028c YCR098c
        YDL054c YDL138w YDL194w YDL199c YDL245c YDL247w YDR119w
        YDR342c YDR343c YDR345c YDR387c YDR497c YDR536w YEL065w
        YEL069c YFL011w YFL040w YGL104c YGR065c YGR138c YGR224w
        YGR260w YGR289c YHL040c YHL047c YHR048w YHR092c YHR094c
        YHR096c YIL120w YIL121w YIL166c YJL163c YJL214w YJL219w
        YJR124c YJR152w YJR158w YJR160c YKL217w YKL221w YKR105c
        YKR106w YLL028w YLL055w YLR004c YLR081w YML116w YML123c
        YMR011w YMR088c YMR155w YMR279c YNL065w YNL125c YNL318c
        YNR055c YNR072w YOL103w YOL119c YOL156w YOL158c YOL162w
        YOL163w YOR273c YOR306c YOR378w YPR156c YPR198w
  Spo:  SPAC1002.16c SPAC1039.04 SPAC11D3.05 SPAC11D3.18c SPAC1348.05 SPAC1348.14c SPAC1399.02
        SPAC14C4.07 SPAC17C9.16c SPAC1B3.15c SPAC1B3.16c SPAC1F8.01 SPAC1F8.03c SPAC20G8.03
        SPAC23D3.12 SPAC2F3.08 SPAC3H1.06c SPAC4F8.15 SPAC6F6.04c SPAC750.02c SPAC922.05c
        SPAPB1A11.01 SPAPB1E7.08c SPBC1271.09 SPBC1271.10c SPBC12C2.13c SPBC1683.01 SPBC1683.03c
        SPBC1683.08 SPBC1683.12 SPBC16A3.17c SPBC1773.15 SPBC21B10.09 SPBC2G2.01c SPBC36.01c
        SPBC36.02c SPBC36.03c SPBC3E7.06c SPBC409.08 SPBC4B4.08 SPBC4F6.09 SPBC530.02
        SPBC530.15c SPBC609.04 SPBC8E4.01c SPBC947.06c SPBPB10D8.01 SPBPB2B2.16c SPCC1235.13
        SPCC1235.14 SPCC1529.01 SPCC18.02 SPCC2H8.02 SPCC330.07c SPCC417.10 SPCC548.06c
        SPCC548.07c SPCC569.05c SPCC576.17c SPCC61.01c SPCC613.01 SPCC613.02 SPCC757.11c
        SPCC757.13 SPCC794.04c SPCC965.13 SPCPB1C11.03
  Ecu:  ECU04g0210 ECU07g1100 ECU10g1410 ECU11g1870 ECU11g1880
  Aae:  aq_1062 aq_1229
  Tma:  TM0130 TM0342 TM0368 TM0563 TM0761 TM1021 TM1032
        TM1060 TM1336 TM1603
  Fnu:  FN1168 FN1497
  Dra:  DR0258 DR0290 DR0395 DR0472 DR1056 DR1223 DR1307
        DR1322 DR1324 DR1327 DR1743 DR1971 DR2031 DR2098
        DR2169 DR2304 DR2307 DR2502 DRA0061 DRA0247 DRA0271
        DRB0043 DRC0040
  Cac:  CAC0020_1 CAC0452 CAC0458 CAC0560 CAC0762 CAC1339 CAC1345
        CAC1447 CAC1452 CAC1504 CAC1530 CAC2753 CAC3346 CAC3368
        CAC3474 CAC3482 CAC3506 CAC3668 CAP0029 CAP0049 CAP0086
        CAP0109 CAP0124 CAP0128 CAP0131
  Cgl:  Cgl0074 Cgl0092 Cgl0111 Cgl0123 Cgl0166 Cgl0181 Cgl0283
        Cgl0322 Cgl0376 Cgl0377 Cgl0416 Cgl1041 Cgl1052 Cgl1113
        Cgl1114 Cgl1213 Cgl1318 Cgl1330 Cgl1432 Cgl1466 Cgl2045
        Cgl2173 Cgl2174 Cgl2175 Cgl2176 Cgl2334 Cgl2357 Cgl2380
        Cgl2441 Cgl2560 Cgl2585 Cgl2586 Cgl2629 Cgl2686 Cgl2719
        Cgl2767 Cgl2854 Cgl2864 Cgl2868 Cgl2919 Cgl2967 Cgl2998
        Cgl3006 Cgl3013
  Mtu:  Rv0037c Rv0246 Rv0783c Rv0842 Rv0849 Rv0876c Rv1200
        Rv1250 Rv1258c Rv1410c Rv1634 Rv1672c Rv1877 Rv1902c
        Rv2209 Rv2265 Rv2333c Rv2456c Rv2459 Rv2846c Rv2994
        Rv3239c_1 Rv3331 Rv3476c Rv3728_1
  MtC:  MT0042 MT0260 MT0807 MT0863 MT0864 MT0899 MT1238
        MT1289 MT1297 MT1454 MT1670 MT1710 MT1747 MT1926
        MT1953 MT2265 MT2327 MT2395 MT2531 MT2534 MT2912
        MT3072 MT3337_1 MT3434 MT3580 MT3831_1
  Mle:  ML0556 ML1562 ML2143
  Lla:  L101912 L104969 L125116 L127813 L129379 L132251 L140856
        L156385 L157472 L180636 L183246 L183932 L184516 L184818
        L19128_2 L198289 L23405 L24511 L35134 L60571 L80679
  Spy:  SPy0501 SPy0543 SPy0570 SPy1340 SPy1392 SPy1856 SPy2120
  Spn:  SP0145 SP0168 SP0379 SP0972 SP1116 SP1587 SP1600
        SP2122
  Sau:  SA0099 SA0115 SA0132 SA0172 SA0263 SA0531 SA0628
        SA0650 SA0839 SA0874 SA1269 SA1341 SA1580 SA1970
        SA1972 SA1982 SA2061 SA2142 SA2145 SA2203 SA2222
        SA2233 SA2250 SA2283 SA2300
  Lin:  lin0332 lin0519 lin0830 lin0980 lin1217 lin1446 lin1658
        lin1790 lin1824 lin2149 lin2274 lin2339 lin2340 lin2449
        lin2476 lin2733 lin2884 lin2916 lin2949 lin2951 lin2959
        lin2977 lin2982
  Bsu:  BS_araE BS_blt BS_bmr BS_csbX BS_iolF BS_lmrB BS_mdr
        BS_mmr BS_tetB BS_ybfB BS_ycbE BS_yceI BS_ycnB BS_ycxA
        BS_yddS BS_ydeG BS_ydeR BS_ydgK BS_ydjK BS_yfiG BS_yfiS
        BS_yfiU BS_yfkF BS_yfkL BS_yfmI BS_yfmO BS_yfnC BS_yhcA
        BS_yhjO BS_yitG BS_yitZ BS_yjbB BS_yjmG BS_ykuC BS_ymfD
        BS_ymfE BS_yncC BS_yoaB BS_yqgE BS_yqjV BS_yttB BS_yubD
        BS_yusP BS_yuxJ BS_yvkA BS_yvmA BS_yvqJ BS_ywbF BS_ywfF
        BS_ywoD BS_ywoG BS_ywtG BS_yxaM BS_yxcC BS_yxlH BS_yyaJ
        BS_yybF BS_yybO
  Bha:  BH0237 BH0293 BH0472 BH0554 BH0807 BH0884 BH1161
        BH1174 BH1403 BH1410 BH1775 BH1788 BH1966 BH2039
        BH2062 BH2079 BH2276 BH2311 BH2528 BH2592 BH2619
        BH2694 BH2749 BH3211 BH3282 BH3309 BH3482 BH3880
        BH3886
  Syn:  sll0771 sll1154 sll1200 sll1204 sll1906 slr0616 slr0642
        slr0796 slr1935
  Nos:  all0371 all0391 all1641 all1711 all2673 all2904 all4025
        all4285 all4462 all4614 all7627 all7629 alr1096 alr2188
        alr2215 alr2363 alr2434 alr3381 alr4176 alr4533
  Eco:  ampG araE b2681m bcr cmr dgoT emrB
        emrD emrY exuT fsr galP hcaT kgtP
        lacY mhpT nanT nupG proP setA setB
        setC shiA xapB xylE yaaU yajR ybdA
        ybjJ ycaD yceE yceL ydeF ydfJ ydhC
        ydiM ydiN ydjE ydjK yebQ yegB yegT
        yfaV yfcJ ygcS ygcZ ygeD yhaU yhfC
        yhhS yhjE yhjX yidY yieO yihN yjhB
        yjiJ yjiO yjiZ ynfM yqcE
  EcZ:  Z1072 Z2501 Z2503 Z2718 Z2719 Z2813 Z2875
        Z3394 Z3494 Z3504 Z3585 Z3623 Z3982 Z4083m
        Z4105 Z5523 ZampG ZaraE Zbcr Zcmr ZemrB
        ZemrD ZemrY ZexuT Zfsr ZgalP ZhcaT ZkgtP
        ZlacY ZmhpT ZnanT ZnupG ZproP ZshiA ZxylE
        ZyaaU ZyajR ZybdA ZycaD ZyceE ZyceL ZydeF
        ZydfJ ZydhC ZydjE ZyegB ZyegT ZyeiO ZygeD
        ZyhaU ZyhfC ZyhhS ZyhjE ZyhjX ZyidY ZyieO
        ZyihN ZyjiJ ZyjiO ZyjiZ ZynfM ZyqcE
  Ecs:  ECs0048 ECs0396 ECs0408 ECs0481 ECs0487 ECs0532 ECs0630
        ECs0922 ECs0925 ECs0983 ECs1431 ECs1443 ECs1866 ECs2141
        ECs2152 ECs2302 ECs2369 ECs2397 ECs2398 ECs2476 ECs2484
        ECs2538 ECs2778 ECs2885 ECs2901 ECs3031 ECs3062 ECs3074
        ECs3121 ECs3131 ECs3134 ECs3206 ECs3241 ECs3246 ECs3402
        ECs3454 ECs3543 ECs3548 ECs3627 ECs3628 ECs3631 ECs3649
        ECs3692 ECs3698 ECs3819 ECs3840 ECs3975 ECs4005 ECs4097
        ECs4215 ECs4322 ECs4403 ECs4432 ECs4614 ECs4647 ECs4696
        ECs4796 ECs4893 ECs5014 ECs5093 ECs5293 ECs5300 ECs5316
  Ype:  YPO0009 YPO0163 YPO0304 YPO0465 YPO0577 YPO0772 YPO0792
        YPO0847 YPO0988 YPO1221 YPO1267 YPO1380 YPO1504 YPO1515
        YPO1563 YPO1572 YPO1668 YPO1712 YPO1768 YPO1915 YPO1932
        YPO1940 YPO2040 YPO2137 YPO2148 YPO2237 YPO2266 YPO2389
        YPO2459 YPO2535 YPO2850 YPO2904 YPO3016 YPO3093 YPO3162
        YPO3169 YPO3263 YPO3268 YPO3309 YPO3650 YPO4048
  Sty:  STM0079 STM0212 STM0328 STM0356 STM0382 STM0436 STM0444
        STM0493 STM0520 STM0593 STM0689 STM0866 STM0868 STM0968
        STM1107 STM1132 STM1154 STM1166 STM1360 STM1361 STM1428
        STM1486 STM1507 STM1516 STM1543 STM1545 STM1574 STM1843
        STM2129 STM2142 STM2179 STM2207 STM2221 STM2274 STM2280
        STM2290 STM2372 STM2421 STM2554 STM2574 STM2654 STM2812
        STM2815 STM2911 STM2962 STM3009 STM3016 STM3091 STM3113
        STM3134 STM3338 STM3473 STM3581 STM3609 STM3698 STM3798
        STM3827 STM3832 STM3847 STM3887 STM4290 STM4412 STM4418
        STM4419 STM4428 STM4434 STM4515 STM4517
  Buc:  BU466 BU535 BU588
  Vch:  VC0069 VC0302 VC1071 VC1261 VC1391 VC1411 VC1597
        VC1618 VC1634 VC1966_1 VC2300 VC2761 VCA0083 VCA0214
        VCA0267 VCA0554 VCA0669 VCA0753 VCA0972
  Pae:  PA0229 PA0235 PA0241 PA0246 PA0334 PA0458 PA0703
        PA0811 PA1019 PA1108 PA1131 PA1212 PA1236 PA1262
        PA1282 PA1286 PA1313 PA1316 PA1352 PA1412 PA1682
        PA1848 PA1908 PA1993 PA2006 PA2055 PA2068 PA2091
        PA2114 PA2210 PA2214 PA2262 PA2269 PA2472 PA2589
        PA2701 PA2835 PA3137 PA3267_1 PA3355 PA3465 PA3467
        PA3532 PA3573 PA3595 PA3709 PA3718 PA3749 PA3926
        PA4096 PA4126 PA4136 PA4187 PA4218 PA4233 PA4343
        PA4393 PA4622 PA4654 PA4887 PA4900 PA4903 PA5030
        PA5160 PA5219 PA5282 PA5311 PA5370 PA5476 PA5530
  Hin:  HI0281 HI0308 HI0350 HI0418 HI0852 HI0897 HI1104
        HI1242
  Pmu:  PM0004 PM0094 PM0285 PM0835 PM1259 PM1533 PM1784
  Xfa:  XF0087 XF0165 XF0268 XF0993 XF1765
  Nme:  NMB0319 NMB0360 NMB0388 NMB0445 NMB1362 NMB1435 NMB1461
        NMB1515
  NmA:  NMA0047 NMA1574 NMA1647 NMA1673 NMA1715 NMA2040 NMA2100
        NMA2127 NMA2168
  Rso:  RSc0154 RSc0216 RSc0421 RSc0547 RSc0585 RSc0647 RSc0805
        RSc1080 RSc1093 RSc1292 RSc1365 RSc1370 RSc1445 RSc1473
        RSc1564_1 RSc1852 RSc2112 RSc2172 RSc2316 RSc2323 RSc2324
        RSc2352 RSc2499 RSc2727 RSc2856 RSc3059 RSc3060 RSc3069
        RSc3134 RSp0007 RSp0052 RSp0075 RSp0078 RSp0107 RSp0182
        RSp0234 RSp0310 RSp0412 RSp0420 RSp0429 RSp0437 RSp0441
        RSp0499 RSp0536 RSp0611 RSp0663 RSp0726 RSp0797 RSp0828
        RSp0834 RSp0896 RSp0985 RSp1047 RSp1177 RSp1256 RSp1278
        RSp1328 RSp1359 RSp1396 RSp1417 RSp1572 RSp1595 RSp1614
  Hpy:  HP0313 HP0936 HP1091 HP1165 HP1181
  jHp:  jhp0298 jhp0334 jhp0871 jhp1092 jhp1107
  Cje:  Cj0035c Cj0250c Cj0339 Cj0461c Cj0484 Cj0850c Cj0938c_1
        Cj0981c Cj0987c Cj1257c Cj1375 Cj1588c Cj1619 Cj1687
  Atu:  AGc1103 AGc139 AGc1532 AGc1716 AGc1756 AGc1918 AGc2011
        AGc2135 AGc2168 AGc231 AGc2391 AGc2694 AGc3119 AGc3403
        AGc3790 AGc3872 AGc3904 AGc4107 AGc4193 AGc4286 AGc4527
        AGc4589 AGc4700 AGc4819 AGc4834 AGc4908 AGc4938 AGl1071
        AGl1094gl AGl1300 AGl1674 AGl1729 AGl1740 AGl2008 AGl2185
        AGl3235 AGl3313 AGl343 AGl738 AGl781 AGpA277 AGpA464
        AGpA571
  Sme:  SMa0185 SMa0224 SMa0383 SMa1301 SMa1328 SMa1447 SMa1641
        SMa1814 SMa1937 SMa1959 SMa2337 SMa2377 SMb20272 SMb20338
        SMb20698 SMb21000 SMb21162 SMb21486 SMb21575 SMc00172 SMc00196
        SMc00350 SMc00536 SMc00537 SMc00563 SMc00744 SMc00807 SMc00813
        SMc00990 SMc01212 SMc01217 SMc01368 SMc01755 SMc01779 SMc01869
        SMc02343 SMc02372 SMc02603 SMc02814 SMc02889 SMc02892 SMc02910
        SMc03167 SMc03237 SMc03277 SMc03825 SMc03889 SMc03987 SMc04362
        SMc04407
  Bme:  BMEI0104 BMEI0181 BMEI0267 BMEI0300 BMEI0353 BMEI0445 BMEI0556
        BMEI0605 BMEI0606 BMEI0927 BMEI1130 BMEI1292 BMEI1322 BMEI1554
        BMEI1555 BMEII0280 BMEII0406 BMEII0515 BMEII0579 BMEII0596 BMEII0662
        BMEII0740 BMEII0794 BMEII0795 BMEII0821 BMEII0822 BMEII0934 BMEII0935
        BMEII1024 BMEII1096 BMEII1119
  Mlo:  mll0051 mll0804 mll0994 mll1210 mll1313 mll1470 mll1522
        mll1685 mll1728 mll2163 mll2492 mll2542 mll2589 mll3424
        mll3464 mll4007 mll4118 mll5686 mll5688 mll6249 mll6284
        mll6844 mll7465 mll8348 mll8356 mll8382 mlr0338 mlr0791
        mlr0845 mlr1142 mlr1277 mlr2264 mlr2380 mlr2429 mlr2687
        mlr2785 mlr2945 mlr3061 mlr3125 mlr3769 mlr3825 mlr4214
        mlr4819 mlr5451_1 mlr6372 mlr6842 mlr7399 mlr7407 mlr8206
        mlr8233 mlr8412
  Ccr:  CC0025 CC0137 CC0336 CC0381 CC0403 CC0751 CC0814
        CC0980 CC0988 CC1019 CC1047 CC1230 CC1281 CC1481
        CC1508 CC1628 CC1774 CC1819 CC2283 CC2315 CC2354
        CC2412 CC2485 CC2486 CC2659 CC3069 CC3078 CC3715
  Rpr:  RP077 RP157 RP313 RP375 RP475 RP603 RP620_1
        RP668 RP685 RP698 RP755 RP781 RP852 RP881
  Rco:  RC0107 RC0200 RC0427 RC0512 RC0535 RC0718 RC0890
        RC0923 RC0924 RC0925 RC0962_1 RC1019 RC1048 RC1075
        RC1170 RC1178 RC1181 RC1214 RC1321 RC1322 RC1323
        RC1368
  Ctr:  CT641
  Cpn:  CPn0736
  Tpa:  TP0840_1
  Bbu:  BBI26
  Mpu:  MYPU_2620 MYPU_7480 MYPU_7760
  Mpn:  MPN076 MPN077 MPN112 MPN113 MPN421
  Mge:  MG061 MG294
_______

[T] COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain
  Afu:  AF2426
  Hbs:  VNG0179C
  Mac:  MA2518
  Mja:  MJ1073
  Mka:  MK0674 MK1000
  Pho:  PH0512
  Pab:  PAB1013
  Pya:  PAE0680
  Sso:  SSO0197
  Ape:  APE1602
  Sce:  YNL207w
  Spo:  SPBC1703.05
  Ecu:  ECU09g1260
_______

[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
  Afu:  AF0682
  Hbs:  VNG1308G
  Mth:  MTH1850_1
  Mja:  MJ0092_1
  Mka:  MK0132_1
  Tac:  Ta1002
  Tvo:  TVN0746
  Pya:  PAE0717 PAE2690
  Sso:  SSO2357
  Ape:  APE0946
  Sce:  YLL041c
  Spo:  SPAC140.01
  Aae:  aq_553 aq_655
  Dra:  DR0951
  Cgl:  Cgl0368
  Mtu:  Rv0247c Rv1553 Rv3319
  MtC:  MT0261 MT1604 MT3420
  Mle:  ML0696
  Sau:  SA0996
  Bsu:  BS_sdhB
  Bha:  BH3091
  Syn:  sll0823 sll1625
  Nos:  all0945
  Eco:  frdB sdhB
  EcZ:  ZfrdB ZsdhB
  Ecs:  ECs0749 ECs5134
  Ype:  YPO0359 YPO1112
  Sty:  STM0735 STM4342
  Vch:  VC2088 VC2657
  Pae:  PA1584
  Hin:  HI0834
  Pmu:  PM0200
  Xfa:  XF1073
  Nme:  NMB0951
  NmA:  NMA1146
  Rso:  RSc1993
  Hpy:  HP0191
  jHp:  jhp0177
  Cje:  Cj0410 Cj0438
  Atu:  AGc4790
  Sme:  SMc02466
  Bme:  BMEI0162
  Mlo:  mll4260
  Ccr:  CC3526
  Rpr:  RP044
  Rco:  RC0069
  Ctr:  CT591
  Cpn:  CPn0790
_______

[J] COG0480 Translation elongation factors (GTPases)
  Afu:  AF1894
  Hbs:  VNG2654Gm
  Mac:  MA1257
  Mth:  MTH1057
  Mja:  MJ1048
  Mka:  MK0679_1 MK0679_3
  Tac:  Ta0446
  Tvo:  TVN1049
  Pho:  PH1899
  Pab:  PAB0187
  Pya:  PAE0332
  Sso:  SSO0728
  Ape:  APE1432
  Sce:  YDR385w YJL102w YKL173w YLR069c YNL163c YOR133w
  Spo:  SPAC513.01c SPBC1306.01c SPBC215.12 SPBC660.10 SPCC553.08c SPCP31B10.07
  Ecu:  ECU09g0810 ECU11g1120 ECU11g1460
  Aae:  aq_001
  Tma:  TM1503 TM1651
  Fnu:  FN1546 FN1556
  Dra:  DR0307 DR0393
  Cac:  CAC0854 CAC1448 CAC3138
  Cgl:  Cgl0488
  Mtu:  Rv0120c Rv0684
  MtC:  MT0128 MT0712
  Mle:  ML1878
  Lla:  L0368
  Spy:  SPy0273
  Spn:  SP0273
  Sau:  SA0505
  Lin:  lin2803
  Bsu:  BS_fus
  Bha:  BH0131
  Syn:  sll0830 sll1098 slr1463
  Nos:  all4338 alr4383
  Eco:  fusA
  EcZ:  ZfusA
  Ecs:  ECs4191
  Ype:  YPO0202
  Sty:  STM3446
  Buc:  BU527
  Vch:  VC0361 VC2342
  Pae:  PA2071 PA4266
  Hin:  HI0579
  Pmu:  PM1356
  Xfa:  XF2629
  Nme:  NMB0138
  NmA:  NMA0135
  Rso:  RSc3022 RSp0804
  Hpy:  HP1195
  jHp:  jhp1118
  Cje:  Cj0493
  Atu:  AGc2489 AGc3558
  Sme:  SMb20049 SMc01312
  Bme:  BMEI0754
  Mlo:  mlr0286 mlr2549
  Ccr:  CC3200
  Rpr:  RP132
  Rco:  RC0174
  Ctr:  CT437
  Cpn:  CPn0550
  Tpa:  TP0450 TP0767
  Bbu:  BB0540 BB0691
  Uur:  UU523
  Mpu:  MYPU_4280
  Mpn:  MPN227
  Mge:  MG089
_______

[M] COG0481 Membrane GTPase LepA
  Sce:  YLR289w
  Spo:  SPAC1B3.04c
  Aae:  aq_1725
  Tma:  TM1623
  Fnu:  FN0777
  Dra:  DR1145
  Cac:  CAC1278
  Cgl:  Cgl2290
  Mtu:  Rv2404c
  MtC:  MT2476
  Mle:  ML0611
  Lla:  L0159
  Spy:  SPy1053
  Spn:  SP1200
  Sau:  SA1413
  Lin:  lin1514
  Bsu:  BS_lepA
  Bha:  BH1342
  Syn:  slr0604
  Nos:  all2508
  Eco:  lepA
  EcZ:  ZlepA
  Ecs:  ECs3435
  Ype:  YPO2716
  Sty:  STM2583
  Buc:  BU260
  Vch:  VC2463
  Pae:  PA0767
  Hin:  HI0016
  Pmu:  PM0063
  Xfa:  XF2243
  Nme:  NMB0766
  NmA:  NMA0977
  Rso:  RSc1060
  Hpy:  HP0355
  jHp:  jhp0329
  Cje:  Cj1030c
  Atu:  AGc411
  Sme:  SMc00349
  Bme:  BMEII0260
  Mlo:  mlr4536
  Ccr:  CC1034
  Rpr:  RP275
  Rco:  RC0369
  Ctr:  CT064
  Cpn:  CPn0359
  Tpa:  TP0510
  Bbu:  BB0088
  Uur:  UU324
  Mpu:  MYPU_2470
  Mpn:  MPN279
  Mge:  MG138
_______

[J] COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
  Sce:  YDL033c
  Spo:  SPAC23H4.04
  Aae:  aq_1224 aq_898 aq_899
  Tma:  TM0520
  Fnu:  FN0563 FN0765 FN1920
  Dra:  DR1759
  Cac:  CAC2233
  Cgl:  Cgl1211
  Mtu:  Rv3024c
  MtC:  MT3108
  Mle:  ML1707
  Lla:  L52034
  Spy:  SPy2188
  Spn:  SP0118
  Sau:  SA1449
  Lin:  lin1547
  Bsu:  BS_yrrA
  Bha:  BH1261
  Syn:  sll0844
  Nos:  all1359
  Eco:  trmU
  EcZ:  ZycfB
  Ecs:  ECs1605
  Ype:  YPO1638
  Sty:  STM1234
  Buc:  BU261
  Vch:  VC1128
  Pae:  PA2626
  Hin:  HI0174
  Pmu:  PM1336
  Xfa:  XF1440
  Nme:  NMB1556
  NmA:  NMA1744
  Rso:  RSc2723
  Hpy:  HP0013 HP1335
  jHp:  jhp0011 jhp1254
  Cje:  Cj0053c Cj1633
  Atu:  AGl2270
  Sme:  SMc00659
  Bme:  BMEI0428
  Mlo:  mlr2824
  Ccr:  CC0897
  Rpr:  RP306
  Rco:  RC0410
  Ctr:  CT287
  Cpn:  CPn0438
  Bbu:  BB0682
  Uur:  UU402
  Mpu:  MYPU_5580
  Mpn:  MPN422
  Mge:  MG295
_______

[G] COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
  Afu:  AF2372
  Hbs:  VNG1379G
  Mac:  MA3344
  Mth:  MTH871
  Mja:  MJ0109 MJ0917_1
  Mka:  MK0741_1
  Pho:  PH1897
  Pab:  PAB0189
  Pya:  PAE3055
  Sso:  SSO2418
  Ape:  APE1798
  Sce:  YDR287w YHR046c
  Aae:  aq_1983
  Tma:  TM1415
  Dra:  DR1703
  Cgl:  Cgl0776 Cgl0777 Cgl1863 Cgl2042
  Mtu:  Rv1604 Rv2701c Rv3137
  MtC:  MT1640 MT2775 MT3224
  Mle:  ML0662 ML1024
  Lla:  L133367
  Spy:  SPy1247
  Spn:  SP1403
  Sau:  SA0958 SA2104
  Lin:  lin1054
  Bsu:  BS_yktC
  Bha:  BH2635
  Syn:  sll1329 sll1383 sll1959
  Nos:  all2917 all4461
  Eco:  suhB
  Ecs:  ECs3399
  Ype:  YPO2899
  Sty:  STM2546
  Buc:  BU285
  Vch:  VC0745
  Pae:  PA3818
  Hin:  HI0937
  Pmu:  PM0315
  Xfa:  XF2476
  Nme:  NMB1347 NMB1924
  NmA:  NMA0529 NMA1559
  Rso:  RSc1160
  Cje:  Cj0128c
  Atu:  AGc1250 AGc3406 AGc3408 AGl192 AGl1926 AGl2172 AGl597
        AGpT267 AGpT37
  Sme:  SMa0483 SMb20150 SMb20159 SMb20362 SMc00535 SMc00896 SMc03994
        SMc04042
  Bme:  BMEI0326 BMEI1131 BMEII0048 BMEII0568 BMEII1032
  Mlo:  mll3039 mll6642 mlr0048 mlr3921 mlr4874 mlr8265
  Ccr:  CC0308 CC2252 CC3269
  Rpr:  RP239
  Rco:  RC0323
  Bbu:  BB0524
_______

[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain
  Hbs:  VNG0489G
  Mac:  MA0088 MA0624 MA1479
  Mth:  MTH1291
  Tac:  Ta1088
  Tvo:  TVN0487
  Sce:  YFL016c YLR090w YMR214w YNL064c YNL077w
  Spo:  SPBC1347.05c SPBC1734.11 SPBC405.06 SPCC4G3.14
  Ecu:  ECU07g0760
  Aae:  aq_1735 aq_703
  Tma:  TM0849
  Fnu:  FN0118 FN1990
  Dra:  DR1424
  Cac:  CAC1283
  Cgl:  Cgl2238 Cgl2738
  Mtu:  Rv0352 Rv2373c
  MtC:  MT0367 MT2442
  Mle:  ML0625 ML2494
  Lla:  L0272
  Spy:  SPy1759
  Spn:  SP0519
  Sau:  SA1408
  Lin:  lin1509
  Bsu:  BS_dnaJ
  Bha:  BH1348
  Syn:  sll0897
  Nos:  alr2447
  Eco:  dnaJ
  EcZ:  ZdnaJ
  Ecs:  ECs0015
  Ype:  YPO0469
  Sty:  STM0013
  Buc:  BU152
  Vch:  VC0856
  Pae:  PA4760
  Hin:  HI1238
  Pmu:  PM0740
  Xfa:  XF2339
  Nme:  NMB0059
  NmA:  NMA0209
  Rso:  RSc2634
  Hpy:  HP1332
  jHp:  jhp1252
  Cje:  Cj1260c
  Atu:  AGc192
  Sme:  SMc02858
  Bme:  BMEI2001
  Mlo:  mll4755
  Ccr:  CC0011
  Rpr:  RP184
  Rco:  RC0232
  Ctr:  CT341
  Cpn:  CPn0032
  Tpa:  TP0217
  Bbu:  BB0517
  Uur:  UU407
  Mpu:  MYPU_7330
  Mpn:  MPN021
  Mge:  MG019
_______

[R] COG0486 Predicted GTPase
  Sce:  YMR023c
  Spo:  SPAC222.05c
  Aae:  aq_871
  Tma:  TM0267
  Fnu:  FN0006
  Dra:  DR1016
  Cac:  CAC3734
  Lla:  L0157
  Spy:  SPy1071
  Spn:  SP1016
  Sau:  SA2501
  Lin:  lin2943
  Bsu:  BS_thdF
  Bha:  BH4062
  Syn:  sll1615
  Nos:  all4677
  Eco:  thdF
  EcZ:  ZthdF
  Ecs:  ECs4641
  Ype:  YPO4103
  Sty:  STM3843
  Buc:  BU016
  Vch:  VC0003
  Pae:  PA5567
  Hin:  HI1002
  Pmu:  PM1166
  Xfa:  XF2778
  Nme:  NMB1987
  NmA:  NMA0454
  Rso:  RSc0005
  Hpy:  HP1452
  jHp:  jhp1345
  Cje:  Cj0956c
  Atu:  AGc5135
  Sme:  SMc02797
  Bme:  BMEI0006
  Mlo:  mll4483
  Ccr:  CC3756
  Rpr:  RP759
  Rco:  RC1175
  Ctr:  CT698
  Cpn:  CPn0838
  Tpa:  TP0550
  Bbu:  BB0179
  Uur:  UU018
  Mpu:  MYPU_0130
  Mpn:  MPN008
  Mge:  MG008
_______

[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains
  Sce:  YER036c YFR009w YLR249w_2 YNL014w_2 YPL226w_2
  Spo:  SPAC3C7.08c_2 SPBC16H5.08c SPBC29A3.09c SPCC417.08_2 SPCC825.01
  Ecu:  ECU05g1190
  Fnu:  FN1301 FN2102
  Dra:  DR0475 DR1103 DR1635
  Cac:  CAC0528 CAC2714 CAC2948 CAC3007 CAC3012 CAC3339
  Cgl:  Cgl0888 Cgl1037 Cgl1386 Cgl1517 Cgl2090 Cgl2400
  Mtu:  Rv1473 Rv1667c Rv1668c Rv2477c
  MtC:  MT1519 MT1707 MT2552
  Mle:  ML1248 ML1816
  Lla:  L101706 L119564 L195415 L73210 L73239
  Spy:  SPy0867 SPy1025 SPy1206 SPy2210
  Spn:  SP0770 SP1114 SP1282 SP1553 SP2230
  Sau:  SA0675 SA1224 SA1852
  Lin:  lin0920 lin1470 lin1989 lin2179 lin2903
  Bsu:  BS_expZ BS_ydiF BS_yfmM BS_yfmR BS_ykpA
  Bha:  BH0550 BH1900 BH2025
  Syn:  sll0912 slr0864
  Nos:  all4183 alr1297
  Eco:  uup ybiT yheS yjjK
  EcZ:  Zuup ZybiT ZyheS ZyjjK
  Ecs:  ECs0897 ECs1033 ECs4203 ECs5349
  Ype:  YPO1419 YPO1491
  Sty:  STM0838 STM1062 STM3459 STM4581
  Buc:  BU364
  Vch:  VC0698 VC1486 VC1520 VC2608
  Pae:  PA1425 PA1964 PA3019 PA4595 PA5252
  Hin:  HI0658 HI1252 HI1300 HI1342
  Pmu:  PM0425 PM0877 PM1582
  Xfa:  XF0944 XF2133 XF2617
  Nme:  NMB0387 NMB1051 NMB1226 NMB1240
  NmA:  NMA1249 NMA1409 NMA2101
  Rso:  RSc0975 RSc1376 RSc1453 RSc2913
  Hpy:  HP0853
  jHp:  jhp0789
  Cje:  Cj0426 Cj0888c
  Atu:  AGc1553 AGc2070 AGc3855 AGc4923 AGl1953 AGl305
  Sme:  SMa0036 SMa2385 SMc00590 SMc03866 SMc04454
  Bme:  BMEI0288 BMEI0553 BMEI1258
  Mlo:  mll1607 mll2036 mlr2633 mlr2634 mlr3870 mlr7932
  Ccr:  CC0998 CC1698 CC2148 CC2587 CC2631
  Rpr:  RP060
  Rco:  RC0088 RC0413 RC0414 RC1187
  Ctr:  CT348
  Cpn:  CPn0023
  Tpa:  TP0838
  Bbu:  BB0742
  Mpu:  MYPU_6900
_______

[D] COG0489 ATPases involved in chromosome partitioning
  Afu:  AF2269 AF2382
  Hbs:  VNG1131G
  Mac:  MA4246
  Mth:  MTH1176
  Mja:  MJ0283
  Mka:  MK0240
  Tac:  Ta1479m
  Tvo:  TVN0088
  Pho:  PH0949 PH1580
  Pab:  PAB0400 PAB1795
  Pya:  PAE0793
  Sso:  SSO0460
  Ape:  APE0230
  Sce:  YGL091c YIL003w
  Spo:  SPAC637.08 SPAC806.02c_1
  Ecu:  ECU08g0740 ECU11g1190
  Aae:  aq_737
  Tma:  TM0644_2 TM1593
  Fnu:  FN2098
  Dra:  DR0998_2 DRA0033
  Cac:  CAC2982 CAC3040 CAC3043 CAC3060
  Cgl:  Cgl0343_2 Cgl1099
  Mtu:  Rv1229c
  MtC:  MT1267
  Mle:  ML1080
  Spn:  SP0349
  Sau:  SA0145 SA1969 SA2456
  Lin:  lin2737
  Bsu:  BS_ybaL BS_yveL BS_ywqD
  Bha:  BH0240 BH3668
  Syn:  sll0923_2 slr0067
  Nos:  all0059_2 all0493_2 all4432_2 all5222_2 alr0652 alr2833_2 alr2856_2
        alr3059_2
  Eco:  mrp wzc_2 yccC_2
  EcZ:  Z3224_2 Zmrp ZyccC_2
  Ecs:  ECs1137_2 ECs2865_2 ECs2919
  Ype:  YPO1523
  Sty:  STM2116_2 STM2154
  Vch:  VC0937_2 VC1037
  Pae:  PA3481
  Hin:  HI1277
  Pmu:  PM0302 PM1018_2
  Xfa:  XF2301
  Nme:  NMB1846
  NmA:  NMA0611
  Rso:  RSc2379 RSp1018_2
  Hpy:  HP0207
  jHp:  jhp0193
  Cje:  Cj1606c
  Atu:  AGc1282 AGc2284_2 AGl1614_2 AGl175_2 AGl2554_2
  Sme:  SMb20961_2 SMb21070_2 SMb21240_2 SMc00876 SMc01795_2
  Bme:  BMEI1174 BMEI1887
  Mlo:  mll2090_2 mlr5276_2 mlr5402 mlr6756_2 mlr8439_2
  Ccr:  CC0164_2 CC2095
  Rpr:  RP121
  Rco:  RC0163
_______

[P] COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels
  Afu:  AF1244
  Aae:  aq_2028
  Dra:  DR1148
  Cac:  CAC2851_2
  Mtu:  Rv3237c
  MtC:  MT3334
  Mle:  ML0781
  Lla:  L75633_2
  Spy:  SPy1259_2
  Bsu:  BS_yhaT BS_yrvC
_______

[R] COG0491 Zn-dependent hydrolases, including glyoxylases
  Afu:  AF0090 AF0234 AF0534 AF0575 AF1343 AF1350 AF1498
        AF1509 AF1748 AF1850 AF2148 AF2266 AF2407
  Hbs:  VNG0231C VNG0291H VNG0440C_2 VNG0709C VNG1327G VNG1340C VNG2073C
        VNG2080C VNG6060C_2 VNG6066C_2 VNG6460C_2 VNG6466C_2 VNG7043_2 VNG7049_2
        VNG7160_2 VNG7166_2
  Mac:  MA1794_1 MA2009 MA2320_1 MA4617
  Mth:  MTH1267
  Mja:  MJ0296 MJ0888
  Mka:  MK1567 MK1634
  Tac:  Ta0086 Ta0105 Ta0668 Ta0751
  Tvo:  TVN0167 TVN0182 TVN0930 TVN1285
  Pho:  PH0096 PH1213
  Pab:  PAB0023 PAB0703
  Pya:  PAE1526 PAE1540 PAE3376 PAE3381 PAE3498
  Sso:  SSO0234 SSO1157 SSO1345 SSO1537 SSO1567 SSO2072 SSO2310
        SSO2515 SSO2519 SSO2890 SSO2940 SSO3132
  Ape:  APE0330 APE0382 APE1260 APE1559 APE2156 APE2265 APE2585
  Sce:  YDR272w YOR040w
  Spo:  SPAC824.07 SPCC13B11.03c
  Ecu:  ECU02g0580
  Aae:  aq_1798 aq_2135 aq_974
  Tma:  TM0607 TM0681 TM0894 TM1295
  Fnu:  FN1162 FN1279 FN1848
  Dra:  DR0172 DR0658 DR1430 DR1823 DR1876 DR2076 DR2264
        DR2557 DRA0304_1 DRA0347
  Cac:  CAC1386 CAC1403 CAC1424 CAC2272 CAC2804 CAC3380 CAC3686
  Cgl:  Cgl0052_1 Cgl0290 Cgl0320 Cgl1279_1 Cgl1341 Cgl1610
  Mtu:  Rv0406c Rv0634c Rv0939_2 Rv1637c Rv1913 Rv2260 Rv2300c
        Rv2581c Rv3677c
  MtC:  MT0419 MT0662 MT0966_2 MT1673 MT1964 MT2321 MT2357
        MT2658 MT3778
  Mle:  ML0270 ML0493 ML1391 ML1912 ML2303
  Lla:  L128550
  Spy:  SPy0646
  Spn:  SP1646
  Sau:  SA0043_1 SA0083_1 SA1375 SA1568
  Lin:  lin1655 lin1904 lin2270
  Bsu:  BS_pksB BS_yflN BS_yobT BS_yqgX BS_yqjP BS_yrkH BS_ytnP
        BS_yybB
  Bha:  BH0476 BH0882 BH1723 BH1837 BH2193 BH2820 BH3260
  Syn:  sll1019 slr0630 slr1259
  Nos:  all0292 all0580 all1228 alr3419 alr3904
  Eco:  gloB ycbL
  EcZ:  ZgloB ZycbL
  Ecs:  ECs0208 ECs1010
  Ype:  YPO0800 YPO1079 YPO1409 YPO1980 YPO3647
  Sty:  STM0261 STM0997 STM3737
  Buc:  BU246
  Vch:  VC1270 VC1562 VC2236 VCA0900 VCA1049
  Pae:  PA0057 PA0832 PA1000 PA1415 PA1813 PA2915 PA3037
        PA4200
  Hin:  HI1274 HI1663
  Pmu:  PM0272 PM0685 PM1479
  Xfa:  XF0768_2 XF1361 XF2160 XF2283
  Nme:  NMB1997 NMB2049
  NmA:  NMA0387 NMA0444
  Rso:  RSc0258 RSc0281 RSc1515 RSc1544 RSc2214 RSc3268 RSp0595
        RSp0596 RSp0703 RSp1314 RSp1345
  Hpy:  HP0813
  jHp:  jhp0749
  Cje:  Cj0809c Cj1589
  Atu:  AGc1105 AGc1482 AGc4004 AGc4347 AGl1113 AGl2423 AGl2726_2
        AGpA127 AGpA200 AGpA282 AGpA453 AGpA454 AGpA456 AGpA815
        AGpT140
  Sme:  SMa0308 SMa1057_2 SMa1811 SMb20168 SMb20866 SMc00087 SMc00276
        SMc00708 SMc00814 SMc01587 SMc02431
  Bme:  BMEI0129 BMEI0496 BMEI1432
  Mlo:  mll0231 mll1963 mll2661 mll3743 mll5024 mll7547 mlr1349
        mlr2158_2 mlr2596 mlr3546 mlr6805
  Ccr:  CC0395 CC0451 CC0519 CC0923 CC1183 CC2139 CC2866
_______

[O] COG0492 Thioredoxin reductase
  Afu:  AF1554
  Hbs:  VNG1259G VNG2301G VNG6074G VNG6075G VNG6451G VNG6452G VNG7055
        VNG7154
  Mac:  MA1368
  Mth:  MTH708
  Mja:  MJ1536
  Mka:  MK1561
  Tac:  Ta0984
  Tvo:  TVN0470 TVN1129
  Pho:  PH1426
  Pab:  PAB0500
  Pya:  PAE1725 PAE2744
  Sso:  SSO2222 SSO2416 SSO2765
  Ape:  APE1061
  Sce:  YDR353w YHR106w
  Ecu:  ECU01g0680 ECU02g0940
  Aae:  aq_407 aq_500
  Tma:  TM0134 TM0869
  Fnu:  FN1163 FN1984_1
  Dra:  DR0412 DR1982 DR2623
  Cac:  CAC0869 CAC1548 CAC3082
  Cgl:  Cgl0673 Cgl3030
  Mtu:  Rv3913
  MtC:  MT4032
  Mle:  ML2703_1
  Lla:  L00196 L0196
  Spy:  SPy0850
  Spn:  SP1458 SP1563
  Sau:  SA0719 SA1311 SA2162 SA2370
  Lin:  lin2075 lin2489 lin2621
  Bsu:  BS_trxB BS_ycgT BS_ypdA BS_yumC
  Bha:  BH0657 BH1428 BH1429 BH1493 BH1623 BH3408 BH3571
  Syn:  slr0600
  Nos:  all0737_1 all4510 alr2204
  Eco:  trxB
  EcZ:  ZtrxB
  Ecs:  ECs0973
  Ype:  YPO1374
  Sty:  STM0958
  Buc:  BU314
  Vch:  VC1182
  Pae:  PA0849 PA2616 PA4170
  Hin:  HI1158
  Pmu:  PM0573
  Xfa:  XF1448
  Nme:  NMB1324
  NmA:  NMA1538
  Rso:  RSc1139 RSc2342
  Hpy:  HP0825 HP1164
  jHp:  jhp0764 jhp1091
  Cje:  Cj0146c Cj0559 Cj1725
  Atu:  AGc2995 AGc3970 AGc405
  Sme:  SMa1890_2 SMa1891 SMc01159 SMc01224
  Bme:  BMEI0512 BMEI0958
  Mlo:  mll0792 mll2552 mlr4645
  Ccr:  CC2871
  Rpr:  RP445 RP514
  Rco:  RC0618 RC0637
  Ctr:  CT099
  Cpn:  CPn0314
  Tpa:  TP0814
  Bbu:  BB0515
  Uur:  UU074
  Mpu:  MYPU_7130
  Mpn:  MPN240
  Mge:  MG102
_______

[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
  Mac:  MA3787
  Tac:  Ta0414
  Tvo:  TVN1157
  Pho:  PH0876 PH1873
  Pab:  PAB1214 PAB1738
  Pya:  PAE3227
  Ape:  APE0935
  Sce:  YDL171c_4 YDR376w
  Spo:  SPAPB1E7.07_4 SPBC3B8.01c
  Ecu:  ECU11g1310
  Aae:  aq_2064
  Tma:  TM1217_2 TM1640
  Dra:  DR0182 DR0496
  Cac:  CAC0764 CAC1674
  Cgl:  Cgl0185 Cgl2697 Cgl2757
  Mtu:  Rv0886_2 Rv3106 Rv3858c
  MtC:  MT0909_2 MT3189 MT3973
  Mle:  ML0062 ML0666 ML2134_2
  Lla:  L114827
  Sau:  SA0431
  Lin:  lin1844
  Bsu:  BS_gltB
  Bha:  BH1729
  Syn:  sll1027
  Eco:  aegA_2 gltD yeiT ygfK_2 ygfT_2
  EcZ:  Z3401 Z4217_2 ZgltD ZyffG_2 ZygfT_2
  Ecs:  ECs3038 ECs3330_2 ECs3751_2 ECs3759_2 ECs4092
  Ype:  YPO0342_2 YPO3558
  Sty:  STM2186 STM2479_2 STM3331
  Vch:  VC2374 VC2377
  Pae:  PA0440 PA5035
  Xfa:  XF2709
  Rso:  RSc2964
  Cje:  Cj0009
  Atu:  AGl2104
  Sme:  SMc01814 SMc04026
  Bme:  BMEI1638 BMEII0039
  Mlo:  mll1646 mll3029
  Ccr:  CC3606
  Rpr:  RP006_1
  Rco:  RC0005_2
  Tpa:  TP0735
_______

[LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
  Afu:  AF2200
  Hbs:  VNG0274C VNG0431G VNG0475a VNG0868H VNG1962C VNG2079G VNG2580C
  Mac:  MA1602 MA1648 MA2655 MA3484 MA3990
  Mth:  MTH122 MTH1336
  Tac:  Ta0353 Ta1352
  Tvo:  TVN0261 TVN1258
  Pya:  PAE0163 PAE0252 PAE0563 PAE0714 PAE2253 PAE3301
  Sso:  SSO2167 SSO3167
  Ape:  APE0600 APE1481 APE2056
  Sce:  YBR111c YJR142w YLR151c YNL118c_1 YOR163w
  Spo:  SPAC13G6.14 SPAC14C4.10c SPAC19A8.12_1 SPAC6F12.05c_1 SPAC6G9.05 SPBP35G2.12
  Ecu:  ECU07g1630
  Aae:  aq_158
  Tma:  TM1181
  Fnu:  FN0747 FN0874 FN0931 FN1108 FN1791_1
  Dra:  DR0004 DR0079 DR0092 DR0149 DR0274 DR0329 DR0603_2
        DR0783 DR0784 DR0876 DR1007 DR1025 DR1184 DR1776
        DR2204 DR2272 DR2356
  Cac:  CAC0084 CAC0446 CAC1006 CAC1854 CAC2828 CAC3601
  Cgl:  Cgl0295 Cgl1127 Cgl1199 Cgl1286_1 Cgl1384 Cgl1722 Cgl2168
        Cgl2691 Cgl3026
  Mtu:  Rv0413 Rv1160 Rv1700 Rv2609c_2 Rv2985_1 Rv3040c Rv3672c
        Rv3908
  MtC:  MT0426 MT1197 MT1739 MT2684_2 MT3063_1 MT3125 MT3773
        MT4027
  Mle:  ML0451_2 ML1682_1 ML2299 ML2698
  Lla:  L0288 L133761 L145850 L155602 L168057 L181238 L24277
        L65733 L93858 L99869
  Spy:  SPy0444 SPy0477 SPy1010 SPy1510 SPy2170 SPy2186
  Spn:  SP0119 SP0740 SP0794 SP0817 SP0989 SP1168 SP1235
        SP1783
  Sau:  SA0425 SA1330 SA1612 SA2278
  Lin:  lin0387 lin1215 lin1224 lin1662 lin1777 lin2079
  Bsu:  BS_mutT BS_yqkG BS_ytkD BS_yvcI
  Bha:  BH0812 BH0986 BH1281 BH1524 BH1893 BH3308 BH3570
        BH3726
  Syn:  sll1045 sll1054 slr2078
  Nos:  all0210 all7351 alr2015 alr2954 alr3533 alr3812 alr4993
  Eco:  mutT ntpA rdsA wcaH yeaB yfaO yfcD
        yffH ygdP ymfB ynjG yrfE
  EcZ:  Z1863 Z2791 Z2917 Z3561 ZmutT ZwbdQ ZwcaH
        ZyeaB ZyfaO ZyffH ZygdP ZyqiE ZyrfE
  Ecs:  ECs0103 ECs1606 ECs2465 ECs2522 ECs2575 ECs2837 ECs2856
        ECs3139 ECs3183 ECs3329 ECs3687 ECs3922 ECs4239
  Ype:  YPO0144 YPO0565 YPO0664 YPO0786 YPO1639 YPO1772 YPO2054
        YPO2167 YPO2781 YPO3035
  Sty:  STM0137 STM1235 STM1301 STM1825 STM1900 STM2107 STM2295
        STM2346 STM2477 STM3004 STM3185 STM3494
  Buc:  BU202
  Vch:  VC0671 VC1302 VC1342_1 VC2392 VC2435 VC2721 VCA0313
        VCA0592 VCA0632 VCA0764
  Pae:  PA0336 PA2625 PA3180 PA3470 PA3754 PA4400_1 PA4841
        PA4971 PA5176
  Hin:  HI0316 HI0398 HI0901 HI0910
  Pmu:  PM0082 PM0981 PM1020 PM1218 PM1544 PM1604
  Xfa:  XF0188 XF0393 XF1120_1 XF1262 XF1441 XF2008
  Nme:  NMB0453 NMB0642 NMB1064 NMB1683 NMB2041
  NmA:  NMA0394 NMA0852 NMA1263 NMA1942 NMA2032
  Rso:  RSc0468 RSc0747 RSc0937 RSc1874 RSc2047 RSc2724 RSc2817
        RSc2831
  Hpy:  HP0507 HP1228
  jHp:  jhp0457 jhp1149
  Cje:  Cj0447 Cj0581
  Atu:  AGc1173 AGc2106 AGc2392 AGc4093 AGc4111 AGc4330 AGc5030
        AGl1185 AGl2231 AGl2627 AGl496 AGpT215 AGpT268 AGpT35
  Sme:  SMc00610 SMc00828 SMc01367 SMc02448 SMc02701 SMc02711 SMc03785
        SMc04272
  Bme:  BMEI0126 BMEI0215 BMEI0453 BMEI0462 BMEI0519 BMEI0629 BMEI0941
        BMEI1640 BMEII0663
  Mlo:  mll0140 mll1399 mll2727 mll3459 mll3998 mlr0150 mlr0843
        mlr2797 mlr3170
  Ccr:  CC0407 CC0418 CC0833 CC1126 CC1346 CC2271 CC2322
        CC2457 CC2652 CC3440 CC3530 CC3650
  Rpr:  RP236
  Rco:  RC0320 RC1139
  Ctr:  CT771
  Cpn:  CPn0917
  Tpa:  TP0731
_______

[J] COG0495 Leucyl-tRNA synthetase
  Afu:  AF2421
  Hbs:  VNG2223G
  Mac:  MA1611
  Mth:  MTH1508
  Mja:  MJ0633
  Mka:  MK1364
  Tac:  Ta0777
  Tvo:  TVN0761
  Pho:  PH0965
  Pab:  PAB1782
  Pya:  PAE1107
  Sso:  SSO0504 SSO0589
  Ape:  APE1015
  Sce:  YLR382c YPL160w
  Spo:  SPAC26F1.13c SPAC4G8.09
  Ecu:  ECU06g0280
  Aae:  aq_1770 aq_351
  Tma:  TM0168
  Fnu:  FN1517
  Dra:  DR2174
  Cac:  CAC0646
  Cgl:  Cgl2961
  Mtu:  Rv0041
  MtC:  MT0047
  Mle:  ML0032
  Lla:  L0352
  Spy:  SPy0173
  Spn:  SP0254
  Sau:  SA1579
  Lin:  lin1769
  Bsu:  BS_leuS
  Bha:  BH3281
  Syn:  sll1074
  Nos:  alr3283
  Eco:  leuS
  EcZ:  ZleuS
  Ecs:  ECs0680
  Ype:  YPO2610
  Sty:  STM0648
  Buc:  BU444
  Vch:  VC0956
  Pae:  PA3987
  Hin:  HI0921
  Pmu:  PM1214
  Xfa:  XF2176
  Nme:  NMB1897
  NmA:  NMA0559
  Rso:  RSc2744
  Hpy:  HP1547
  jHp:  jhp1452
  Cje:  Cj1091c
  Atu:  AGc4985
  Sme:  SMc02804
  Bme:  BMEI0242
  Mlo:  mll4077
  Ccr:  CC3749
  Rpr:  RP421
  Rco:  RC0585
  Ctr:  CT209
  Cpn:  CPn0153
  Tpa:  TP0586
  Bbu:  BB0251
  Uur:  UU371
  Mpu:  MYPU_0930
  Mpn:  MPN384
  Mge:  MG266
_______

[R] COG0496 Predicted acid phosphatase
  Afu:  AF0942
  Hbs:  VNG1241G
  Mac:  MA0104
  Mth:  MTH1435
  Mja:  MJ0559
  Mka:  MK0433
  Pya:  PAE2908 PAE3523
  Ape:  APE0801
  Sce:  YBR094w_1
  Aae:  aq_832
  Tma:  TM1662
  Dra:  DR2397
  Syn:  sll1108 sll1459
  Nos:  alr3139 alr4846
  Eco:  surE
  EcZ:  ZsurE
  Ecs:  ECs3598
  Ype:  YPO3358
  Sty:  STM2927
  Vch:  VC0531
  Pae:  PA3625
  Hin:  HI0702
  Pmu:  PM1612
  Xfa:  XF0858
  Nme:  NMB1484
  NmA:  NMA1693
  Rso:  RSc1204
  Hpy:  HP0930
  jHp:  jhp0865
  Cje:  Cj0293
  Atu:  AGc3128
  Sme:  SMc02063
  Bme:  BMEI1081
  Mlo:  mll1080
  Ccr:  CC1998
  Ctr:  CT218
  Cpn:  CPn0262
  Tpa:  TP0419
_______

[L] COG0497 ATPase involved in DNA repair
  Aae:  aq_561
  Fnu:  FN0268
  Dra:  DR1477
  Cac:  CAC2073
  Cgl:  Cgl1380
  Mtu:  Rv1696
  MtC:  MT1735
  Mle:  ML1360
  Lla:  L0264
  Spy:  SPy1495
  Spn:  SP1202
  Sau:  SA1350
  Lin:  lin1405
  Bsu:  BS_recN
  Bha:  BH2776
  Syn:  sll1520
  Nos:  alr4961
  Eco:  recN
  EcZ:  ZrecN
  Ecs:  ECs3478
  Ype:  YPO1105
  Sty:  STM2684
  Vch:  VC0852
  Pae:  PA4763
  Hin:  HI0070
  Pmu:  PM0332
  Xfa:  XF2343
  Nme:  NMB0740
  NmA:  NMA0952
  Rso:  RSc2651
  Hpy:  HP1393
  jHp:  jhp1434
  Cje:  Cj0642
  Atu:  AGc3777
  Sme:  SMc01877
  Bme:  BMEI0588
  Mlo:  mll1541
  Ccr:  CC1983
  Rpr:  RP182
  Rco:  RC0229
  Tpa:  TP0442
_______

[E] COG0498 Threonine synthase
  Afu:  AF0551 AF1316
  Hbs:  VNG0541G VNG2108G VNG2430G
  Mac:  MA1610 MA3297
  Mth:  MTH253
  Mja:  MJ1465
  Mka:  MK0974
  Tac:  Ta0026 Ta0495
  Tvo:  TVN0071 TVN0752
  Pho:  PH0857 PH1406_1 PH1627
  Pab:  PAB0369 PAB1677 PAB1869_1
  Pya:  PAE2878
  Sso:  SSO0493 SSO0878
  Ape:  APE1488 APE2286
  Sce:  YCR053w
  Spo:  SPAC9E9.06c
  Aae:  aq_425 aq_608
  Tma:  TM0546
  Dra:  DRA0360
  Cac:  CAC0999
  Cgl:  Cgl2171
  Mtu:  Rv1295
  MtC:  MT1334
  Mle:  ML1130
  Lla:  L0092
  Spn:  SP2066
  Sau:  SA1165
  Lin:  lin2690
  Bsu:  BS_thrC
  Bha:  BH3421
  Syn:  sll1172 sll1688
  Nos:  all2072 alr3293
  Eco:  thrC
  EcZ:  ZthrC
  Ecs:  ECs0004
  Ype:  YPO0461
  Sty:  STM0004
  Buc:  BU192
  Vch:  VC2362
  Pae:  PA3735
  Hin:  HI0087
  Pmu:  PM0115
  Xfa:  XF2223
  Nme:  NMB1046
  NmA:  NMA1440
  Rso:  RSc1328
  Hpy:  HP0098
  jHp:  jhp0090
  Cje:  Cj0812
  Atu:  AGc1442
  Sme:  SMa0485 SMc00077
  Bme:  BMEI1450
  Mlo:  mll7517 mll9542
  Ccr:  CC3399
_______

[H] COG0499 S-adenosylhomocysteine hydrolase
  Afu:  AF0886 AF2000
  Hbs:  VNG2251G
  Mac:  MA1275
  Mth:  MTH1636
  Mja:  MJ1388
  Mka:  MK0368
  Tac:  Ta0469
  Tvo:  TVN0986
  Pho:  PH0540
  Pab:  PAB1372
  Pya:  PAE3140
  Sso:  SSO0755
  Ape:  APE0624
  Sce:  YER043c
  Spo:  SPBC8D2.18c
  Aae:  aq_1180
  Tma:  TM0172
  Cgl:  Cgl0729
  Mtu:  Rv3248c
  MtC:  MT3346
  Mle:  ML0771
  Syn:  sll1234
  Nos:  alr1414
  Pae:  PA0432
  Xfa:  XF1037
  Rso:  RSc0093
  Atu:  AGc46
  Sme:  SMc02755
  Bme:  BMEI2029
  Mlo:  mll5088
  Ccr:  CC0257
_______

[QR] COG0500 SAM-dependent methyltransferases
  Afu:  AF0046 AF0140 AF0429 AF0512 AF0601 AF0790 AF2194
  Hbs:  VNG0049H VNG0184H VNG0294G VNG0503C VNG0821C VNG0845C VNG1065C
        VNG1280C VNG2147G VNG2398G VNG7121
  Mac:  MA0030 MA0148 MA0195 MA0297 MA0303 MA0535 MA0769
        MA0804 MA0841 MA0996 MA0999 MA1065 MA1127 MA1178
        MA1248 MA1251 MA1319 MA1347 MA1360 MA1634 MA1670
        MA1733 MA1801 MA1848 MA1920 MA1945 MA2137 MA2151
        MA2152 MA2155 MA2164 MA2475 MA2485 MA2537 MA2730
        MA2773 MA2779 MA2781 MA2884 MA2905 MA2906 MA2923
        MA3044 MA3045 MA3347 MA3454 MA3459 MA3466 MA3467
        MA3534 MA3662 MA3765 MA3783 MA3904 MA3915 MA3932
        MA4009 MA4016 MA4017 MA4018 MA4180 MA4188 MA4204
        MA4248 MA4352_1 MA4374 MA4527 MA4535 MA4620 MA4656
  Mth:  MTH1075 MTH1801 MTH1876 MTH578 MTH675
  Mja:  MJ0045 MJ0046 MJ0086 MJ0638 MJ0906 MJ1123 MJ1252
  Mka:  MK0046 MK0163 MK0239 MK0396 MK0453 MK0637 MK0845
        MK1684
  Tac:  Ta0016 Ta0192m Ta0580 Ta0630m Ta0699m Ta0717m Ta0739
        Ta1015 Ta1348
  Tvo:  TVN0193 TVN0247 TVN0574 TVN0629 TVN0837 TVN0873 TVN0881
        TVN0896 TVN1404
  Pho:  PH0226 PH0266 PH0392 PH0398 PH0545 PH1081 PH1134
        PH1224 PH1304 PH1305
  Pab:  PAB0165 PAB0179 PAB0269 PAB0601 PAB0687 PAB0721 PAB1377
        PAB1765 PAB2213
  Pya:  PAE0443 PAE0926 PAE1106 PAE1165 PAE1224 PAE2806 PAE2979
        PAE3217 PAE3361 PAE3486
  Sso:  SSO0479 SSO0554 SSO0673 SSO0814 SSO0817 SSO0818 SSO0821
        SSO0829 SSO0838 SSO1178 SSO1613 SSO1623 SSO1777 SSO1898
        SSO1901 SSO2024 SSO2027 SSO2177 SSO2246 SSO2963
  Ape:  APE0216 APE1183 APE1190 APE1503 APE1889
  Sce:  YBR034c YBR236c YBR271w YCR047c YDR083w YDR316w YER175c
        YHR209w YIL064w YJR129c YML008c YML014w YNL024c YOR239w
  Spo:  SPAC1348.04 SPAC13D6.03c SPAC1B3.06c SPAC23C4.06c SPAC25B8.09 SPAC25B8.10 SPAC26A3.06
        SPAC3A11.03 SPAC56F8.09 SPAC750.03c SPAC890.07c SPAC977.03 SPBC1347.09 SPBC16E9.05
        SPBC21C3.07c SPBC3B9.04 SPBC3H7.11 SPBC839.14c SPBC8D2.10c_2 SPBPI055 SPCC330.10
        SPCC338.11c SPCC70.08c
  Ecu:  ECU05g0950 ECU09g1500 ECU10g0380 ECU10g0800
  Aae:  aq_1079 aq_1270 aq_1457 aq_2139 aq_262 aq_442 aq_510
  Tma:  TM0318 TM0524 TM0756_3 TM0938 TM1293 TM1389
  Fnu:  FN0197 FN0701_1 FN0736 FN0778 FN0851 FN1306_2 FN1919
  Dra:  DR0026 DR0356 DR0431 DR0468 DR0504 DR1078 DR1085
        DR1101 DR1676 DR1679 DR2274 DR2562 DR2622 DRA0130
  Cac:  CAC0151 CAC0541 CAC0567 CAC0728 CAC0929 CAC2371 CAC2451_2
        CAC2531 CAC2566 CAC2573 CAC2574 CAC2827 CAC3419 CAC3659
        CAP0083
  Cgl:  Cgl1091 Cgl1200 Cgl1261 Cgl1321 Cgl1397 Cgl1419 Cgl2055
        Cgl2504 Cgl2551 Cgl2802 Cgl2890
  Mtu:  Rv0089 Rv0224c Rv0326 Rv0329c Rv0520 Rv0560c Rv0567
        Rv0839 Rv1147 Rv1377c Rv1403c Rv1405c Rv1498c Rv1506c
        Rv1513 Rv1515c Rv1523 Rv1597 Rv1978 Rv2003c Rv2067c
        Rv2258c Rv2423 Rv2622 Rv2675c Rv2952 Rv2954c Rv2955c
        Rv2956 Rv3030 Rv3037c Rv3038c Rv3120 Rv3322c Rv3342
        Rv3699 Rv3729_2 Rv3832c
  MtC:  MT0098 MT0234 MT0341 MT0344 MT0542 MT0586 MT0593
        MT0861 MT1180 MT1421 MT1447 MT1449 MT1546 MT1554
        MT1563 MT1565 MT1574 MT1633 MT2030 MT2059 MT2127
        MT2319 MT2496 MT2697 MT2749 MT3026 MT3028 MT3029
        MT3030 MT3114 MT3122 MT3123 MT3202 MT3423 MT3445
        MT3802 MT3833_2 MT3940
  Mle:  ML0130 ML0308 ML0394 ML0551 ML1713 ML1723 ML1783
        ML2346 ML2347 ML2584
  Lla:  L103246 L130150 L141634 L196904 L28696 L55507
  Spy:  SPy0312 SPy0377 SPy1582
  Spn:  SP0652 SP0977_2 SP1578 SP1743 SP2103
  Sau:  SA0047 SA0257 SA0767 SA1419 SA1479 SA1582 SA1950
        SA2257 SA2383
  Lin:  lin0536 lin0641 lin1345 lin1520 lin1771 lin1826 lin1986
  Bsu:  BS_ybaJ BS_ycgJ BS_ydaC BS_yodH BS_ypiP BS_yqeM BS_yrhH
        BS_yrrT BS_ytqB BS_yxbB BS_yxjB
  Bha:  BH0355 BH0418 BH0658 BH0821 BH1330 BH1804 BH2051
        BH2058 BH2060 BH2072 BH2331 BH2367 BH2531 BH2887
        BH3285 BH3909 BH3955
  Syn:  sll0418 sll0487 sll0564 sll0829 sll1173 sll1174 sll1407
        sll1456 sll1526_1 sll1530 sll1693 sll1950 slr0089 slr0303
        slr0482 slr0907 slr0909 slr1039 slr1068 slr1069 slr1115
        slr1117 slr1183 slr1436 slr1610 slr1618 slr1763 slr2119
  Nos:  all0012 all0325 all0621 all0625 all0772 all1988 all2013
        all2085 all2121 all2466_1 all2640 all2721 all3016 all3750
        all4946 all5241 all7630 all7648 all8085 all8516 alr1520
        alr1803 alr1920 alr2858 alr2859 alr2865 alr3038 alr3095
        alr3527 alr4488 alr4532 alr5229 alr5233 alr5370
  Eco:  bioC rrmA smtA tehB yafE yafS ybcY
        yecO yecP yhiQ yjhP ymfD ynbC_2
  EcZ:  Z0233 Z1925 Z1963 Z2317_2 Z4850 ZbioC ZsmtA
        ZtehB ZyafS ZyebH ZyecO ZyecP ZyhiQ
  Ecs:  ECs0206 ECs0209 ECs0855 ECs1004 ECs1656 ECs1696 ECs2012_2
        ECs2035 ECs2532 ECs2580 ECs2581 ECs4325 ECs4369
  Ype:  YPO1080 YPO1153 YPO1346 YPO1402 YPO1748 YPO1949_2 YPO1992
        YPO2049 YPO2050 YPO2814_2 YPO3218 YPO3974
  Sty:  STM0259 STM0262 STM0796 STM0991 STM1608 STM1638 STM1835
        STM1905 STM1906 STM3593 STM4500_1 STM4500_2
  Buc:  BU586
  Vch:  VC0073 VC0258 VC0813 VC1114 VC1163 VC1164 VC1226
        VC1717 VC2003 VC2235 VCA0264_2 VCA0832
  Pae:  PA0343 PA0389 PA0503 PA0547_2 PA0558 PA0774 PA0775
        PA0798 PA1088 PA1161 PA1216 PA1814 PA1921 PA2034
        PA2036 PA2088 PA2302_2 PA2454 PA2540_2 PA2650 PA2679
        PA2832 PA3119 PA3515 PA3680 PA3882 PA4075 PA4178
        PA4209 PA4379 PA4790 PA4800 PA4803 PA4836 PA5115
        PA5457 PA5459
  Hin:  HI0095 HI0319 HI0849m HI0912 HI1273 HI1275_2 HI1351
        HI1551
  Pmu:  PM0340 PM0374_1 PM0656_2 PM0686 PM0985 PM1158 PM1194
        PM1310 PM1804 PM1903
  Xfa:  XF0201 XF0607 XF1397 XF1617_2 XF2099
  Nme:  NMB0271 NMB0474 NMB0747 NMB0939 NMB1270_1 NMB1296 NMB1608
        NMB1617_2
  NmA:  NMA0960 NMA1135 NMA1475_1 NMA1506 NMA1806 NMA1816_2 NMA2011
        NMA2215
  Rso:  RSc0026 RSc0360 RSc0462 RSc1144 RSc1514 RSc1804_1 RSc2346
        RSc2735 RSc3026 RSc3157 RSp0174 RSp0355 RSp0498
  Hpy:  HP0388 HP0419 HP1254
  jHp:  jhp0965 jhp0993 jhp1175
  Cje:  Cj0170 Cj0171 Cj0261c Cj0304c Cj0590 Cj0976 Cj1300
        Cj1325 Cj1326 Cj1419c Cj1420c Cj1426c
  Atu:  AGc1706 AGc1920 AGc2998 AGc3844 AGc3852_2 AGc4253 AGc683
        AGl1305 AGl1526GM AGl1626 AGl168 AGl189 AGl2320 AGl2422gl
        AGl2861 AGl3211 AGl3243 AGl540_1 AGpA202
  Sme:  SMa0168 SMa0169 SMa0279 SMa1594 SMa2347 SMb20059 SMb20238
        SMb21055 SMb21061 SMb21062 SMb21067 SMb21271 SMb21312 SMb21410
        SMb21418 SMb21433 SMc00709 SMc01426 SMc01842_2 SMc01847 SMc02445
        SMc03143
  Bme:  BMEI0081 BMEI0182 BMEI0558_2 BMEI0852 BMEI1834 BMEII0829
  Mlo:  mll1589_2 mll1644 mll2162 mll3280_2 mll3545 mll3672 mll3787
        mll3908 mll4275 mll4858 mll5661 mll5735 mll8033 mll8050
        mll9724 mlr0132 mlr0581 mlr1181 mlr1575 mlr1901 mlr2298
        mlr2960 mlr3455 mlr3539 mlr5368 mlr5379 mlr5887 mlr6161
        mlr6226 mlr6770 mlr6936 mlr7341_1 mlr9730 msr8736
  Ccr:  CC0067 CC0520 CC0524 CC0831 CC1004 CC1017_1 CC1108
        CC1327 CC1846 CC1901 CC1925 CC2141_2 CC2856 CC2891
        CC3341_1 CC3481 CC3495
  Rpr:  RP028 RP092_2 RP335 RP459 RP527 RP789_1
  Rco:  RC0031_1 RC0078 RC0122_2 RC0692 RC0760 RC1221_1
  Ctr:  CT133 CT830
  Cpn:  CPn0187 CPn0987 CPn1018
  Tpa:  TP0289
_______

[O] COG0501 Zn-dependent protease with chaperone function
  Afu:  AF0235 AF0925
  Hbs:  VNG0129G VNG0329G
  Mac:  MA2111 MA4542
  Mth:  MTH1817 MTH569
  Mja:  MJ1682
  Mka:  MK0171
  Tac:  Ta0861
  Tvo:  TVN1011
  Pho:  PH1256 PH1588
  Pab:  PAB0555 PAB0758 PAB1974
  Pya:  PAE3195 PAE3461 PAE3547
  Sso:  SSO1859 SSO2694 SSO3231 SSO3238
  Ape:  APE0824 APE1045
  Sce:  YJR117w YKR087c
  Spo:  SPAC3H1.05 SPAP14E8.04
  Ecu:  ECU02g1380 ECU05g1370 ECU05g1390
  Aae:  aq_1991
  Fnu:  FN0920
  Dra:  DR0190
  Cac:  CAC0557
  Cgl:  Cgl0020
  Mtu:  Rv0563 Rv1845c Rv1977
  MtC:  MT0589 MT1893 MT2029
  Mle:  ML2064 ML2278
  Spy:  SPy0331
  Spn:  SP1283
  Lin:  lin0962
  Bsu:  BS_yhfN BS_ykrL BS_yxkI
  Bha:  BH2702
  Syn:  sll1280 slr0241 slr1939
  Nos:  all0173 all2263 all4074 all4378 alr2312 alr2570
  Eco:  htpX ycaL yggG
  EcZ:  ZhtpX ZycaL ZyggG
  Ecs:  ECs0992 ECs2539 ECs3811
  Ype:  YPO0398 YPO0927 YPO1706
  Sty:  STM0979 STM1844 STM3077
  Buc:  BU321
  Vch:  VC1117 VCA0581
  Pae:  PA0277 PA2283 PA2286 PA2830 PA4632
  Hin:  HI0720
  Pmu:  PM0468 PM1190
  Xfa:  XF0006 XF2625
  Nme:  NMB0822
  NmA:  NMA0562 NMA1031
  Rso:  RSc0074 RSc0153 RSc0644 RSc0941
  Hpy:  HP0382 HP0927
  jHp:  jhp0861 jhp0999
  Cje:  Cj0723c
  Atu:  AGc347 AGc5123
  Sme:  SMc00783 SMc04091
  Bme:  BMEI0236
  Mlo:  mlr4097
  Ccr:  CC0877 CC2509
_______

[H] COG0502 Biotin synthase and related enzymes
  Mac:  MA0154
  Mth:  MTH1143 MTH1278 MTH1279
  Mja:  MJ0597 MJ0785 MJ1296
  Mka:  MK0016
  Sce:  YGR286c
  Spo:  SPCC320.01c
  Aae:  aq_975
  Tma:  TM1269
  Fnu:  FN1000
  Cac:  CAC0210 CAC1631
  Cgl:  Cgl0072
  Mtu:  Rv1589
  MtC:  MT1624
  Mle:  ML1220
  Sau:  SA2213
  Bsu:  BS_bioB
  Bha:  BH1748
  Syn:  slr1364
  Nos:  alr1921
  Eco:  bioB
  EcZ:  ZbioB
  Ecs:  ECs0853
  Ype:  YPO1151
  Sty:  STM0794
  Buc:  BU291
  Vch:  VC1112
  Pae:  PA0500
  Hin:  HI1022
  Pmu:  PM0379
  Xfa:  XF0064
  Nme:  NMB1146 NMB1184
  NmA:  NMA1358
  Rso:  RSc0266
  Hpy:  HP1406
  jHp:  jhp1298
  Cje:  Cj1685c
  Atu:  AGl1708
  Bme:  BMEII0775
  Mlo:  mll5831 mll6007_1 mll9100
  Ccr:  CC3521
  Cpn:  CPn1044
_______

[F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
  Hbs:  VNG0559G VNG2117C
  Mac:  MA0717
  Mth:  MTH1320
  Mja:  MJ1655
  Mka:  MK0610
  Pho:  PH1691
  Pab:  PAB2035
  Pya:  PAE2071
  Sso:  SSO0233
  Ape:  APE0060 APE1080
  Sce:  YDR441c YML022w
  Spo:  SPAC23A1.03
  Tma:  TM1384
  Fnu:  FN1483 FN2073
  Dra:  DR0568 DR0878 DR1617
  Cac:  CAC0873 CAC2275 CAC3224
  Cgl:  Cgl1615
  Mtu:  Rv2584c
  MtC:  MT2661
  Lla:  L134453 L159396 L22735
  Spy:  SPy0268 SPy0927 SPy1136
  Spn:  SP1577 SP1847 SP1979
  Sau:  SA0373 SA0454 SA1461
  Lin:  lin0231 lin1559 lin1998
  Bsu:  BS_apt BS_purR BS_xpt
  Bha:  BH0062 BH1241 BH1514
  Syn:  sll1430
  Nos:  alr4582
  Eco:  apt gpt
  EcZ:  Zapt Zgpt
  Ecs:  ECs0265 ECs0522
  Ype:  YPO3123 YPO3225 YPO4019
  Sty:  STM0317 STM0483
  Buc:  BU251
  Vch:  VC1053 VC2277
  Pae:  PA1543 PA5298
  Hin:  HI0674 HI0692 HI1230
  Pmu:  PM0363 PM1369
  Nme:  NMB1662
  NmA:  NMA1920
  Rso:  RSc0417
  Hpy:  HP0572
  jHp:  jhp0519
  Cje:  Cj0927
  Atu:  AGc3180 AGc4069 AGl877
  Sme:  SMb21280 SMc00945 SMc02698
  Bme:  BMEI0476 BMEI0940
  Mlo:  mll0141 mll2701
  Tpa:  TP1039
  Bbu:  BB0777
  Uur:  UU488
  Mpu:  MYPU_3220
  Mpn:  MPN395
  Mge:  MG276
_______

[F] COG0504 CTP synthase (UTP-ammonia lyase)
  Afu:  AF0252
  Hbs:  VNG1830G
  Mac:  MA3279
  Mth:  MTH419
  Mja:  MJ1174
  Mka:  MK0205
  Tac:  Ta0044m
  Tvo:  TVN0033
  Pho:  PH1792
  Pab:  PAB0231
  Pya:  PAE3518
  Sso:  SSO0201
  Ape:  APE1604
  Sce:  YBL039c YJR103w
  Spo:  SPAC10F6.03c
  Ecu:  ECU11g0480 ECU11g0880
  Aae:  aq_1334
  Tma:  TM0803
  Dra:  DR1573
  Cac:  CAC2892
  Cgl:  Cgl1383
  Mtu:  Rv1699
  MtC:  MT1738
  Mle:  ML1363
  Lla:  L88252
  Spy:  SPy1894
  Spn:  SP0494
  Sau:  SA1929
  Lin:  lin2704
  Bsu:  BS_ctrA
  Bha:  BH3792
  Syn:  sll1443
  Nos:  alr5000
  Eco:  pyrG
  EcZ:  ZpyrG
  Ecs:  ECs3640
  Ype:  YPO3377
  Sty:  STM2953
  Buc:  BU416
  Vch:  VC2448
  Pae:  PA2268_1 PA3637
  Hin:  HI1077
  Pmu:  PM1872
  Xfa:  XF1288
  Nme:  NMB1554
  NmA:  NMA1742
  Rso:  RSc1126
  Hpy:  HP0349
  jHp:  jhp0323
  Cje:  Cj0027
  Atu:  AGc2984 AGpA703
  Sme:  SMc01025
  Bme:  BMEI0849
  Mlo:  mll0606
  Ccr:  CC1720
  Rpr:  RP378
  Rco:  RC0523
  Ctr:  CT183
  Cpn:  CPn0236
  Tpa:  TP0305
  Bbu:  BB0575
  Uur:  UU284
  Mpu:  MYPU_6660
_______

[EF] COG0505 Carbamoylphosphate synthase small subunit
  Afu:  AF1273
  Hbs:  VNG1815G
  Mac:  MA2144
  Mth:  MTH998
  Mja:  MJ1019
  Mka:  MK0491
  Tac:  Ta0792m
  Tvo:  TVN0802
  Pya:  PAE0946
  Sso:  SSO0640
  Sce:  YJL130c_1 YOR303w
  Spo:  SPAC22G7.06c_1 SPBC56F2.09c
  Aae:  aq_410
  Tma:  TM0558
  Fnu:  FN0421
  Dra:  DR0684
  Cac:  CAC2645
  Cgl:  Cgl1572
  Mtu:  Rv1383
  MtC:  MT1427
  Mle:  ML0535
  Lla:  L43866
  Spy:  SPy0833
  Spn:  SP1276
  Sau:  SA1045
  Lin:  lin1950
  Bsu:  BS_carA BS_pyrAA
  Bha:  BH2537 BH2896
  Syn:  sll1498
  Nos:  alr1155
  Eco:  carA
  EcZ:  ZcarA
  Ecs:  ECs0035
  Ype:  YPO0481
  Sty:  STM0066
  Buc:  BU145
  Vch:  VC2390
  Pae:  PA4758
  Pmu:  PM1502
  Xfa:  XF1106
  Nme:  NMB1849
  NmA:  NMA0608
  Rso:  RSc1519
  Hpy:  HP1237
  jHp:  jhp1158
  Cje:  Cj1494c
  Atu:  AGc3938
  Sme:  SMc01569
  Bme:  BMEI0526
  Mlo:  mlr2489
  Ccr:  CC2834
_______

[E] COG0506 Proline dehydrogenase
  Hbs:  VNG2120G
  Sce:  YLR142w
  Spo:  SPCC70.03c
  Dra:  DR0814
  Cgl:  Cgl0099_1
  Mtu:  Rv1188
  MtC:  MT1225
  Sau:  SA1585
  Bsu:  BS_ycgM BS_yusM
  Bha:  BH1939 BH2740
  Syn:  sll1561_1
  Nos:  alr0540_1
  Eco:  putA_1
  EcZ:  ZputA_1
  Ecs:  ECs1260_1
  Ype:  YPO1851_1
  Sty:  STM1124_1
  Pae:  PA0782_1
  Pmu:  PM0589_1
  Nme:  NMB0401_1
  NmA:  NMA2084_1
  Rso:  RSc3301_1
  Hpy:  HP0056_1
  jHp:  jhp0048_1
  Cje:  Cj1503c_1
  Atu:  AGl1394_1
  Sme:  SMc02181_1
  Bme:  BMEII0564_1
  Mlo:  mll1160_1
  Ccr:  CC0804_1
_______

[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
  Mja:  MJ1519
  Sce:  YHR031c YML061c
  Spo:  SPBC887.14c
  Dra:  DR1902
  Cac:  CAC1143 CAC2854
  Mtu:  Rv0629c
  MtC:  MT0657
  Lla:  L180415
  Spy:  SPy1844
  Spn:  SP0401
  Sau:  SA1447
  Lin:  lin1544
  Bsu:  BS_yrrC
  Bha:  BH1263
  Nos:  all7071 alr8034_1
  Eco:  recD
  EcZ:  ZrecD
  Ecs:  ECs3676
  Ype:  YPCD1.84c YPO1021
  Sty:  PSLT108 STM2993
  Buc:  BU455
  Vch:  VC2319
  Pae:  PA4283
  Hin:  HI1322
  Pmu:  PM0517
  Xfa:  XF0425
  Nme:  NMB1233
  NmA:  NMA1401
  Cje:  Cj0945c
  Atu:  AGc3671 AGl66 AGpA164 AGpT237
  Sme:  SMa0934 SMa0992 SMb21087 SMc01414
  Bme:  BMEI0619
  Mlo:  mll0964 mll1421 mll5729
  Ctr:  CT033 CT652
  Cpn:  CPn0123 CPn0752
  Bbu:  BB0632
  Mpu:  MYPU_7820
_______

[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
  Hbs:  VNG2219G
  Tac:  Ta1436
  Tvo:  TVN0100
  Pya:  PAE2648
  Sso:  SSO12093 SSO1529 SSO1530
  Ape:  APE1671 APE2347
  Sce:  YDR148c YGR193c YNL071w
  Spo:  SPBC776.15c SPCC1259.09c SPCC794.07
  Dra:  DR0032 DR0083 DR0256
  Cgl:  Cgl1105_2 Cgl2158
  Mtu:  Rv1248c_2 Rv1734c Rv2215 Rv2495c
  MtC:  MT1286_2 MT2272 MT2570
  Mle:  ML0861 ML1095_2
  Lla:  L0035
  Spy:  SPy1029 SPy1031_1
  Spn:  SP1162
  Sau:  SA0945 SA1244 SA1346
  Lin:  lin1046 lin1411
  Bsu:  BS_acoC BS_bfmBB BS_odhB BS_pdhC
  Bha:  BH0215 BH0778 BH1824 BH1847 BH2205 BH2653 BH2761
  Syn:  sll1841
  Nos:  alr3606
  Eco:  aceF sucB
  EcZ:  ZaceF ZsucB
  Ecs:  ECs0119 ECs0752
  Ype:  YPO1114 YPO3418
  Sty:  STM0153 STM0737
  Buc:  BU206 BU303
  Vch:  VC2086 VC2413
  Pae:  PA1586 PA2249 PA3415 PA4152_1 PA5016
  Hin:  HI1232 HI1661
  Pmu:  PM0278 PM0894
  Xfa:  XF0868_1 XF0869 XF1549
  Nme:  NMB0956 NMB1342 NMB1344_1
  NmA:  NMA1150 NMA1555
  Rso:  RSc1270 RSc1601 RSc1799
  Atu:  AGc2638_1 AGc2641 AGc4775 AGl2719
  Sme:  SMb20019 SMc01031_1 SMc01032 SMc02483 SMc03203
  Bme:  BMEI0141 BMEI0855_1 BMEI0856 BMEII0060 BMEII0218_1 BMEII0746
  Mlo:  mll3627 mll4300 mll4471 mlr0384_1 mlr0385
  Ccr:  CC0340 CC1727_1 CC1729
  Rpr:  RP179 RP530
  Rco:  RC0226 RC0764
  Ctr:  CT055 CT247 CT400
  Cpn:  CPn0306 CPn0377 CPn0527
  Mpu:  MYPU_7610_1 MYPU_7620
  Mpn:  MPN391
  Mge:  MG272
_______

[E] COG0509 Glycine cleavage system H protein (lipoate-binding)
  Hbs:  VNG1605G
  Tac:  Ta1366m
  Tvo:  TVN0288
  Pho:  PH1317
  Pab:  PAB0559
  Sso:  SSO0920 SSO1061 SSO1105
  Ape:  APE0951
  Sce:  YAL044c
  Spo:  SPBP19A11.01
  Aae:  aq_1052 aq_1108 aq_1657 aq_402 aq_944
  Tma:  TM0212
  Dra:  DR1811
  Mtu:  Rv1826
  MtC:  MT1874
  Mle:  ML2077
  Spy:  SPy1217
  Sau:  SA0313 SA0760
  Lin:  lin2519
  Bsu:  BS_yusH
  Bha:  BH3484
  Syn:  slr0879
  Nos:  all4608
  Eco:  gcvH
  EcZ:  ZgcvH
  Ecs:  ECs3775
  Ype:  YPO0906
  Sty:  STM3054
  Vch:  VCA0277
  Pae:  PA2446 PA4796 PA5214
  Xfa:  XF0181
  Nme:  NMB0575
  NmA:  NMA0759
  Rso:  RSc3294
  Atu:  AGc2700
  Sme:  SMc02048
  Bme:  BMEII0560
  Mlo:  mlr0884
  Ccr:  CC3354
  Ctr:  CT282
  Cpn:  CPn0433
  Mpu:  MYPU_4410
_______

[M] COG0510 Predicted choline kinase involved in LPS biosynthesis
  Sce:  YDR147w YLR133w
  Spo:  SPAC13G7.12c
  Fnu:  FN1237_2 FN1670_2
  Lla:  L155396
  Spy:  SPy1727
  Spn:  SP0549 SP1269
  Sau:  SA1570
  Lin:  lin1657
  Bsu:  BS_ytmP
  Bha:  BH3263
  Eco:  ycfN
  EcZ:  ZycfN
  Ecs:  ECs1484
  Ype:  YPO1614
  Sty:  STM1208
  Vch:  VC1893
  Hin:  HI1537
  Mlo:  mll5367 mll5370
  Tpa:  TP0107_2
  Mpu:  MYPU_0040 MYPU_7400
  Mpn:  MPN532
  Mge:  MG356
_______

[I] COG0511 Biotin carboxyl carrier protein
  Afu:  AF2085 AF2216
  Mac:  MA0674_2
  Mth:  MTH1107_2
  Mja:  MJ1231_2
  Pho:  PH0834_2 PH1284
  Pab:  PAB1771
  Sso:  SSO2464
  Sce:  YBR208c_5 YMR207c_2 YNR016c_2
  Spo:  SPAC56E4.04c_2
  Aae:  aq_1363 aq_1520_2 aq_1614_2
  Tma:  TM0717
  Fnu:  FN0200
  Dra:  DR0118 DRA0310_2
  Cac:  CAC2289 CAC3572
  Cgl:  Cgl1295
  Mtu:  Rv0973c_2 Rv3221c
  MtC:  MT1001_2 MT3317
  Mle:  ML0802
  Lla:  L0187
  Spy:  SPy1176 SPy1183 SPy1747
  Spn:  SP0423
  Sau:  SA1358 SA1435
  Lin:  lin1393
  Bsu:  BS_accB BS_yngGa
  Bha:  BH1133 BH2788
  Syn:  slr0435
  Nos:  all5057
  Eco:  accB
  EcZ:  ZaccB
  Ecs:  ECs4127
  Ype:  YPO3659
  Sty:  STM0055_2 STM3352_2 STM3379
  Vch:  VC0296 VC0550_2 VC0793m_2
  Pae:  PA0493 PA1400_2 PA4847 PA5435_2
  Hin:  HI0971
  Pmu:  PM1092 PM1422_2
  Xfa:  XF0048
  Nme:  NMB1860
  NmA:  NMA0597
  Rso:  RSc2786 RSp0941
  Hpy:  HP0371
  jHp:  jhp1010
  Cje:  Cj1291c
  Atu:  AGc2454 AGl1179
  Sme:  SMc01344
  Bme:  BMEI1062
  Mlo:  mll0206
  Ccr:  CC1829_4 CC1883 CC3214_2
  Ctr:  CT123
  Cpn:  CPn0183
  Tpa:  TP0056_2
_______

[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II
  Afu:  AF1602
  Hbs:  VNG0386Gm VNG1646G
  Mac:  MA2986
  Mth:  MTH1656
  Mja:  MJ0238
  Mka:  MK0436
  Tac:  Ta0807
  Tvo:  TVN1023
  Pab:  PAB2046
  Pya:  PAE2459
  Sso:  SSO0894
  Ape:  APE2555
  Sce:  YKL211c_1 YNR033w_1
  Spo:  SPBC1539.09c_1 SPBP8B7.29_1
  Aae:  aq_549
  Tma:  TM0141_1
  Fnu:  FN1731
  Dra:  DR0196_2 DR1766
  Cac:  CAC3162
  Cgl:  Cgl0970_1 Cgl2972
  Mtu:  Rv0013
  MtC:  MT0016
  Mle:  ML0015
  Lla:  L0053 L0178
  Spy:  SPy1991
  Spn:  SP1816
  Sau:  SA0668 SA1200
  Lin:  lin1673 lin2892
  Bsu:  BS_pabA
  Bha:  BH0091
  Syn:  slr0055
  Nos:  all0269 all0414_2 alr3233_2 alr3443_1
  Eco:  pabA trpD_1
  EcZ:  ZpabA ZtrpD_1
  Ecs:  ECs1835_1 ECs4211
  Ype:  YPO0169 YPO2207
  Sty:  STM1724_1 STM3469
  Buc:  BUpT02 BUpT04
  Vch:  VC1173 VC2619
  Pae:  PA0649 PA1002 PA1903_2 PA4214_2
  Hin:  HI1171 HI1388
  Pmu:  PM0583 PM1463
  Xfa:  XF0211 XF1915
  Nme:  NMB0966
  NmA:  NMA1163
  Rso:  RSc2882
  Hpy:  HP1281
  jHp:  jhp1202
  Cje:  Cj0346_1 Cj0861c
  Atu:  AGc4162_2
  Sme:  SMc02725_2
  Bme:  BMEI0449_2
  Mlo:  mlr2774_2
  Ccr:  CC1897
_______

[LKJ] COG0513 Superfamily II DNA and RNA helicases
  Afu:  AF2254
  Mac:  MA3956
  Mth:  MTH203
  Mja:  MJ0669
  Tac:  Ta0297
  Tvo:  TVN1303
  Sso:  SSO1889 SSO2036
  Sce:  YBL111c YBL112c YBR142w YBR237w YDL031w YDL084w YDL160c
        YDR021w YDR194c YDR243c YDR545w YEL077c YER190w YFL002c
        YFL066c YGL064c YGL078c YGL171w YGR296w YHL050c YHR065c
        YHR169w YHR218w YHR219w YIL177c YJL033w YJL138c YJL225c
        YKR024c YKR059w YLL008w YLL066c YLL067c YLR276c YLR466w
        YLR467w YML133c YMR290c YNL112w YNL339c YNR038w YOR046c
        YOR204w YOR396w YPL029w YPL119c YPL283c YPR204w
  Spo:  SPAC1006.07 SPAC1093.05 SPAC17G6.14c SPAC1F5.10 SPAC1F7.02c SPAC22F3.08c SPAC30D11.03
        SPAC31A2.07c SPAC637.11 SPAC823.08c SPBC12C2.06 SPBC17D1.06 SPBC21H7.04 SPBC24C6.02
        SPBC4F6.07c SPBC543.06c SPBC691.04 SPBC776.09 SPBP8B7.16c SPCC10H11.01 SPCC1494.06c
        SPCC1795.11 SPCC285.03 SPCC63.11
  Ecu:  ECU02g0670 ECU02g1520 ECU05g1270 ECU06g1250 ECU07g1060 ECU08g1080 ECU09g1200
        ECU09g1640 ECU10g0440 ECU10g0690 ECU10g1680
  Aae:  aq_613
  Fnu:  FN1975
  Dra:  DR0335 DR1624
  Cac:  CAC0778 CAC0784 CAC2748 CAC3010
  Cgl:  Cgl0747 Cgl1130 Cgl1415
  Mtu:  Rv1253 Rv3211
  MtC:  MT1292 MT3307
  Mle:  ML0811
  Lla:  L0339 L0340
  Spy:  SPy1369 SPy1415 SPy1659
  Spn:  SP0761 SP1483 SP1586
  Sau:  SA1387 SA1885
  Lin:  lin0859 lin1214 lin1488 lin1833
  Bsu:  BS_deaD BS_ydbR BS_yfmL BS_yqfR
  Bha:  BH1385 BH2384 BH3348
  Syn:  slr0083
  Nos:  alr1223 alr4718
  Eco:  dbpA deaD rhlB rhlE srmB
  EcZ:  ZdbpA ZdeaD ZrhlB ZrhlE ZsrmB
  Ecs:  ECs0875 ECs1927 ECs3442 ECs4043 ECs4713
  Ype:  YPO1776 YPO2708 YPO3488 YPO3869
  Sty:  STM0820 STM1655 STM2643 STM3280 STM3914
  Buc:  BU372
  Vch:  VC0305 VC0660 VC1407 VC2564 VCA0061 VCA0204 VCA0768
        VCA0804 VCA0990
  Pae:  PA0428 PA0455 PA2840 PA3466 PA3861 PA3950
  Hin:  HI0231 HI0422 HI0892
  Pmu:  PM1112 PM1840 PM1921
  Xfa:  XF0192 XF0252 XF2696
  Nme:  NMB1368 NMB1422
  NmA:  NMA1580 NMA1634
  Rso:  RSc0539 RSc0622 RSc0952 RSc2211
  Hpy:  HP0247
  jHp:  jhp0232
  Atu:  AGc3366 AGc4238 AGc4993 AGl1362
  Sme:  SMb20880 SMc00522 SMc01090 SMc03877
  Bme:  BMEI0275 BMEI0934 BMEI1035 BMEI1824
  Mlo:  mll0224 mlr0349 mlr3852 mlr4393
  Ccr:  CC0657 CC0835 CC1847
  Rpr:  RP669
  Rco:  RC1020
  Tpa:  TP0770
  Uur:  UU582
  Mpu:  MYPU_0690
  Mpn:  MPN443 MPN623
  Mge:  MG308 MG425
_______

[L] COG0514 Superfamily II DNA helicase
  Mac:  MA4507
  Ape:  APE1353_2
  Sce:  YMR190c
  Spo:  SPAC212.11 SPAC2G11.12
  Ecu:  ECU07g1130
  Fnu:  FN0578
  Dra:  DR1289
  Cac:  CAC2687
  Cgl:  Cgl0869
  Lla:  L0268
  Sau:  SA0676 SA1313
  Lin:  lin2056 lin2900
  Bsu:  BS_recQ BS_yocI
  Bha:  BH1607
  Syn:  slr1536
  Nos:  alr0205 alr3451 alr4842
  Eco:  recQ
  EcZ:  Z4801 Z4802 Z4803 ZrecQ
  Ecs:  ECs4282 ECs4283 ECs4284 ECs4752
  Ype:  YPO3833
  Sty:  STM3958
  Vch:  VC0196
  Pae:  PA3344
  Hin:  HI0728
  Pmu:  PM1427
  Xfa:  XF1381
  Nme:  NMB0274
  NmA:  NMA2213
  Rso:  RSc3025
  Atu:  AGc92
  Sme:  SMc01566
  Mlo:  mll4050
  Ccr:  CC3465
  Tpa:  TP0103
_______

[RTKL] COG0515 Serine/threonine protein kinase
  Hbs:  VNG0928G
  Tac:  Ta0488
  Tvo:  TVN0584
  Pya:  PAE0692 PAE0815
  Sso:  SSO2291 SSO3182 SSO3207_2
  Sce:  YAL017w_2 YAR018c YAR019c YBL016w YBL105c_2 YBR028c YBR059c
        YBR097w_1 YBR160w YBR274w YCL024w YCR008w YCR073c_2 YCR091w
        YDL017w YDL025c YDL028c YDL079c YDL101c YDL108w YDL159w
        YDL214c YDR122w YDR247w YDR283c_1 YDR466w YDR477w_1 YDR490c
        YDR507c YDR523c YER123w YER129w YFL029c YFL033c_1 YFR014c
        YGL083w YGL158w YGL179c YGL180w YGR040w YGR052w YGR092w
        YGR188c_2 YHL007c YHR030c YHR079c_2 YHR082c YHR102w YHR135c
        YHR205w YIL035c YIL095w YJL057c YJL095w YJL106w YJL128c
        YJL141c YJL164c YJL165c YJL187c YJR059w YKL048c_1 YKL101w
        YKL116c YKL126w YKL139w YKL161c YKL166c YKL168c YKL171w
        YKL198c YKL199c YLL019c YLR096w YLR113w YLR248w YLR362w
        YMR001c YMR104c YMR139w YMR216c YMR291w YNL020c YNL154c
        YNL161w YNL183c_2 YNL298w_2 YNL307c YNR031c_2 YNR047w_2 YOL016c
        YOL045w_2 YOL100w YOL113w YOL128c YOR061w YOR231w YOR233w
        YOR267c YOR351c YPL026c YPL031c YPL042c YPL140c YPL141c
        YPL150w YPL153c YPL203w YPL204w YPL209c YPL236c YPR054w
        YPR106w YPR111w YPR161c
  Spo:  SPAC12B10.14c SPAC140.05 SPAC14C4.03 SPAC167.01 SPAC1687.15 SPAC17G8.14c_2 SPAC1805.01c_2
        SPAC1805.05 SPAC19E9.02 SPAC1B9.02c SPAC1D4.06c SPAC1D4.11c SPAC1D4.13 SPAC1E11.03
        SPAC1F3.02c SPAC1F5.09c SPAC20G4.03c SPAC222.07c SPAC22E12.14c SPAC22G7.08 SPAC23A1.06c
        SPAC23C11.11 SPAC23C11.16 SPAC23C4.12 SPAC23H4.02 SPAC23H4.17c SPAC24B11.06c SPAC24B11.11c
        SPAC27E2.09_1 SPAC29A4.16 SPAC2C4.14c SPAC2F3.15 SPAC2F7.03c SPAC31G5.09c SPAC3C7.06c
        SPAC3H1.13 SPAC4G8.05 SPAC57A10.02 SPAC644.06c SPAC821.12 SPAC890.03 SPAC9G1.02_2
        SPAC9G1.09 SPACUNK12.02c SPBC106.10 SPBC119.07_1 SPBC119.08 SPBC11B10.09 SPBC12D12.04c_2
        SPBC1347.06c SPBC1604.14c SPBC16E9.13 SPBC17F3.02 SPBC1861.09 SPBC18H10.15 SPBC19C2.05
        SPBC19F8.07 SPBC1D7.05c SPBC21.06c SPBC21.07c SPBC21C3.18 SPBC32C12.03c SPBC32H8.10
        SPBC337.04 SPBC36B7.09 SPBC3H7.15 SPBC409.07c SPBC4C3.11 SPBC4F6.06 SPBC530.14c
        SPBC543.07 SPBC557.04 SPBC660.14 SPBC6B1.02 SPBC725.06c SPBC776.12c SPBC8D2.01
        SPBC8D2.19 SPBP23A10.10 SPBP35G2.05c SPBPI064 SPCC1020.10 SPCC1259.13 SPCC1322.08
        SPCC1322.12c_2 SPCC1450.11c SPCC162.10 SPCC16C4.11 SPCC18B5.03 SPCC18B5.11c SPCC1919.01
        SPCC24B10.07 SPCC297.03 SPCC320.12c SPCC417.06c SPCC4G3.08 SPCC576.15c SPCC63.08c
        SPCC70.05c SPCC74.03c SPCC74.06_1 SPCC777.14 SPCC830.12 SPCP1E11.02
  Ecu:  ECU01g0630 ECU01g1320 ECU02g0510 ECU02g0550 ECU02g1450 ECU03g0620 ECU03g0630
        ECU03g0910 ECU03g0980 ECU05g0630 ECU05g1510 ECU07g0360 ECU07g0520 ECU07g1270
        ECU08g0230 ECU08g1480 ECU08g1620 ECU08g1790 ECU08g1920 ECU08g1960 ECU10g0120
        ECU10g0570 ECU11g0180 ECU11g0960 ECU11g1290 ECU11g1500 ECU11g1980
  Aae:  aq_576
  Dra:  DR0058_1 DR0534_1 DR1213 DR1243 DR1851 DR2518_1 DRA0332
        DRA0335_1
  Cac:  CAC0404_1 CAC1728_1 CAC2400
  Cgl:  Cgl0041_1 Cgl0042 Cgl2127_1 Cgl2694 Cgl3028_2
  Mtu:  Rv0014c_1 Rv0015c Rv0410c Rv0931c_1 Rv1266c Rv1743_1 Rv1746
        Rv2088 Rv2176 Rv2914c Rv3080c_1 Rv3910_2
  MtC:  MT0017_1 MT0018 MT0423 MT0958_1 MT1304 MT1785_1 MT1788
        MT2149 MT2232 MT2982 MT3165_1 MT4029_2
  Mle:  ML0016_1 ML0017 ML0304 ML0897 ML2700_2
  Lla:  L138452_1
  Spy:  SPy1625_1
  Spn:  SP1061 SP1344 SP1612 SP1732_1
  Sau:  SA0077 SA1063_1
  Lin:  lin0627 lin1934_1
  Bsu:  BS_yabT BS_ybdM BS_yloP_1 BS_yrzF BS_yrzG
  Bha:  BH0080 BH2504_1 BH2734_2
  Syn:  sll0776 sll1574 sll1575 slr0152 slr0599 slr0868 slr1225
        slr1443 slr1697_1
  Nos:  all0192 all0323_1 all0438_1 all0886_1 all1625_1 all1919 all2238
        all2282_1 all2334 all2760 all3169_1 all3206 all3207 all3557_1
        all3691_1 all3773_1 all4518 all4668 all4687_1 all4813 all4838_2
        all5278 alr0344_1 alr0354_1 alr0548_2 alr0709_1 alr0710_1 alr0900_1
        alr1311 alr1336_1 alr1869_2 alr2258_1 alr2259 alr2411 alr2412
        alr2502_1 alr2682_1 alr3119_1 alr3268_1 alr3706 alr3732 alr3877
        alr3997 alr4141 alr4366 alr4368 alr4949_1 alr4954_2 alr7232_1
        alr7383
  EcZ:  Z1444
  Ype:  YPCD1.72c YPO0592
  Vch:  VC0227
  Pae:  PA0074_1 PA1671 PA1782_2 PA2502_2 PA2727_1 PA5006_1 PA5006_2
  Hin:  HI0260.1
  Pmu:  PM1303
  Xfa:  XF2153
  Rso:  RSc2157 RSp0216
  Hpy:  HP0432
  Atu:  AGl1065
  Mlo:  mlr2363 mlr6580_1
  Ctr:  CT145_1 CT301_1 CT673
  Cpn:  CPn0095_1 CPn0148_1 CPn0703
  Uur:  UU216
  Mpu:  MYPU_6850
  Mpn:  MPN248
  Mge:  MG109
_______

[F] COG0516 IMP dehydrogenase/GMP reductase
  Hbs:  VNG1001G_1 VNG1001G_3
  Mth:  MTH142_1 MTH142_3
  Mja:  MJ1616_1 MJ1616_3
  Mka:  MK1600_1 MK1600_3
  Tac:  Ta0219_1 Ta0219_3
  Tvo:  TVN1375_1 TVN1375_3
  Pho:  PH0307_1 PH0307_3
  Pab:  PAB1250_1 PAB1250_3
  Ape:  APE1507
  Sce:  YAR073w_1 YAR073w_3 YAR075w YHR216w_1 YHR216w_3 YLR432w_1 YLR432w_3
        YML056c_1 YML056c_3
  Spo:  SPBC2F12.14c_1 SPBC2F12.14c_3
  Aae:  aq_2023_1 aq_2023_3
  Tma:  TM1347_1 TM1347_3
  Fnu:  FN1231_1 FN1231_3
  Dra:  DR1878_1 DR1878_3
  Cac:  CAC2701_1 CAC2701_3 CAC3471
  Cgl:  Cgl0587_1 Cgl0587_3 Cgl0588 Cgl2623_1 Cgl2623_3
  Mtu:  Rv1843c_1 Rv1843c_3 Rv3410c Rv3411c_1 Rv3411c_3
  MtC:  MT1891_1 MT1891_3 MT3518 MT3519_1 MT3519_3
  Mle:  ML0387_1 ML0387_3 ML0388 ML2066_1 ML2066_3
  Lla:  L158186 L21264_1 L21264_3
  Spy:  SPy1135 SPy2206_1 SPy2206_3
  Spn:  SP1249 SP2228_1 SP2228_3
  Sau:  SA0375_1 SA0375_3 SA1172
  Lin:  lin0179_1 lin0179_3 lin2901_1 lin2901_3
  Bsu:  BS_guaB_1 BS_guaB_3 BS_yumD
  Bha:  BH0020_1 BH0020_3
  Syn:  slr1722
  Nos:  alr0051
  Eco:  guaB_1 guaB_3 guaC
  EcZ:  ZguaB_1 ZguaB_3 ZguaC
  Ecs:  ECs0108 ECs3370_1 ECs3370_3
  Ype:  YPO2871_1 YPO2871_3 YPO3428
  Sty:  STM0141 STM2511_1 STM2511_3
  Buc:  BU204
  Vch:  VC0767_1 VC0767_3 VCA0197
  Pae:  PA3770_1 PA3770_3
  Hin:  HI0221.1_2 HI0221_1 HI0221_3
  Pmu:  PM0295_1 PM0295_3
  Xfa:  XF2430_1 XF2430_3
  Nme:  NMB1201_1 NMB1201_3
  NmA:  NMA1372_1 NMA1372_3
  Rso:  RSc1429_1 RSc1429_3
  Hpy:  HP0829_1 HP0829_3 HP0854
  jHp:  jhp0768_1 jhp0768_3 jhp0790
  Cje:  Cj1058c_1 Cj1058c_3
  Atu:  AGc1108_1 AGc1108_3
  Sme:  SMc00815_1 SMc00815_3
  Bme:  BMEII0896_1 BMEII0896_3
  Mlo:  mlr8350_1 mlr8350_3
  Ccr:  CC1617_1 CC1617_3
  Cpn:  CPn0172 CPn0172a
  Bbu:  BBB17_1 BBB17_3
_______

[R] COG0517 FOG: CBS domain
  Afu:  AF0062 AF0211 AF0332_2 AF0332_3 AF0847 AF0848 AF1186_2
        AF1259_1 AF1415_2
  Hbs:  VNG0651G_1 VNG1001G_2 VNG1218C VNG1544G_2 VNG1663C VNG1949G VNG2168C_2
        VNG2351C
  Mac:  MA0007_2 MA1821_2 MA2714_2 MA3565 MA3609_2 MA4084 MA4093
        MA4647 MA4648 MA4649 MA4650 MA4651
  Mth:  MTH1222 MTH1223 MTH1224 MTH1225 MTH1226 MTH1282_1 MTH142_2
        MTH1575 MTH1622 MTH1884 MTH406 MTH644 MTH740 MTH816_2
        MTH816_3 MTH855_2 MTH992
  Mja:  MJ0100_2 MJ0188_1 MJ0392_2 MJ0392_3 MJ0450 MJ0556 MJ0653
        MJ0729 MJ0868 MJ0922 MJ1004 MJ1225 MJ1404 MJ1426
        MJ1616_2
  Mka:  MK0089 MK0458 MK0525 MK0526 MK0779 MK0869 MK0907_2
        MK0936 MK1090 MK1245 MK1600_2
  Tac:  Ta0207 Ta0219_2 Ta0289 Ta0611 Ta0812 Ta1464_2
  Tvo:  TVN0094_2 TVN0662 TVN0797 TVN1312 TVN1375_2 TVN1387
  Pho:  PH0107 PH0267 PH0307_2 PH0600 PH1595 PH1780 PH1855
  Pab:  PAB0389 PAB0961 PAB1250_2 PAB2063 PAB2118 PAB2191 PAB2277
  Pya:  PAE1028 PAE1315 PAE1518 PAE1873 PAE2072 PAE2364 PAE2382
        PAE2691 PAE2864 PAE2866_2 PAE2866a PAE2898 PAE2961 PAE3169
        PAE3588
  Sso:  SSO0029 SSO0376_2 SSO0674 SSO1075 SSO2588 SSO2691 SSO2740
        SSO3174 SSO3202_2 SSO3205 SSO3230
  Ape:  APE0231 APE0233 APE0234 APE0267 APE0383 APE0785 APE1510
        APE1552_2 APE1838 APE2178 APE2489
  Sce:  YAR073w_2 YBR214w YGL056c YGL115w YGR155w_2 YHR216w_2 YJR040w_2
        YLR432w_2 YML056c_2
  Spo:  SPAC1556.08c SPAC1F12.01c SPAC24C9.05c SPBC19C7.11_2 SPBC2F12.14c_2 SPBC646.13
  Aae:  aq_040_1 aq_1546_2 aq_2023_2 aq_411_2 aq_438_2
  Tma:  TM0587_2 TM0715_2 TM0829 TM0892 TM0935 TM1140 TM1347_2
        TM1354_1
  Fnu:  FN0795 FN0903_2 FN1231_2 FN1926_2
  Dra:  DR0990 DR1878_2
  Cac:  CAC0678 CAC0979 CAC2701_2 CAC2702_2 CAC3008 CAC3674
  Cgl:  Cgl0587_2 Cgl2623_2
  Mtu:  Rv1077_2 Rv1843c_2 Rv2406c Rv2625c_2 Rv2626c Rv2683 Rv3411c_2
  MtC:  MT1108_2 MT1891_2 MT2478 MT2700_2 MT2701 MT2757 MT3519_2
  Mle:  ML0387_2 ML1037 ML2066_2 ML2396_2
  Lla:  L110441 L21264_2
  Spy:  SPy0364 SPy2206_2
  Spn:  SP0754 SP1878 SP2228_2
  Sau:  SA0375_2 SA1393
  Lin:  lin0179_2 lin0562 lin1008 lin1979 lin2901_2
  Bsu:  BS_acuB BS_guaB_2 BS_yhcV BS_ykuL BS_ylbB BS_yqzB
  Bha:  BH0020_2 BH1372 BH1482 BH2605 BH2710 BH3236
  Syn:  sll0528_2 sll1253_2 sll1864_2 slr0172 slr2111_1
  Nos:  all1427_1 all1844_2 all1914_1 all2095_1 all2379_1 all3989_2 alr0765_1
        alr1229_1 alr2079_2 alr3120_1 alr3813 alr3900_2 alr4891_2
  Eco:  guaB_2 gutQ_2 yrbH_2
  EcZ:  ZguaB_2 ZgutQ_2 ZyrbH_2
  Ecs:  ECs3370_2 ECs3564_2 ECs4076_2
  Ype:  YPO2871_2 YPO3577_2
  Sty:  STM2511_2 STM2838_2 STM3315_2
  Vch:  VC0737 VC0767_2 VC1031 VC1710_3 VC2523_2 VCA0540_2
  Pae:  PA0250 PA0399_2 PA2159 PA2192 PA3258_2 PA3770_2 PA4457_2
  Hin:  HI0221_2 HI1678_2
  Pmu:  PM0295_2 PM0525_2
  Xfa:  XF0603_2 XF1413_2 XF2430_2
  Nme:  NMB0352_2 NMB1201_2
  NmA:  NMA1372_2 NMA2135_2
  Rso:  RSc0183 RSc0413_2 RSc1429_2 RSc1563 RSc2431_2
  Hpy:  HP0829_2 HP1429_2
  jHp:  jhp0768_2 jhp1324_2
  Cje:  Cj1058c_2 Cj1329_1 Cj1443c_2
  Atu:  AGc1108_2 AGc1510_2 AGc2753_2 AGc3216 AGl1123 AGl2124_2
  Sme:  SMa0636 SMa1086 SMa1126_2 SMa1521 SMb20809_2 SMb20830_2 SMb20925_2
        SMb21441 SMb21481 SMc00033_2 SMc00815_2 SMc01002 SMc02268_2
  Bme:  BMEI0740 BMEI1445_2 BMEII0021_2 BMEII0896_2
  Mlo:  mll1477_2 mll2953_2 mll3023_2 mll4505_2 mll6611 mlr0188 mlr0980
        mlr8350_2
  Ccr:  CC1617_2 CC2263_2 CC2555_2 CC2626 CC3094_1
  Rpr:  RP505_2
  Rco:  RC0661_2
  Ctr:  CT399_2
  Cpn:  CPn0526_2
  Bbu:  BBB17_2
_______

[F] COG0518 GMP synthase - Glutamine amidotransferase domain
  Afu:  AF1277 AF1320
  Hbs:  VNG0228G VNG2501C
  Mac:  MA1151 MA2696 MA2966 MA4590
  Mth:  MTH709
  Mja:  MJ1575
  Mka:  MK0551
  Tac:  Ta0944m
  Tvo:  TVN1088
  Pho:  PH1346
  Pab:  PAB0549
  Pya:  PAE3369_1
  Sso:  SSO1857 SSO2451
  Ape:  APE2452_1
  Sce:  YLR126c YMR217w_1
  Spo:  SPAC13C5.04 SPAP7G5.02c_1
  Aae:  aq_236_1
  Tma:  TM1158 TM1820_1
  Fnu:  FN1444_1
  Dra:  DR1874_1
  Cac:  CAC2700_1
  Cgl:  Cgl0591_1 Cgl1505
  Mtu:  Rv3396c_1
  MtC:  MT3504_1
  Mle:  ML0395_1
  Lla:  L115968_1
  Spy:  SPy1204_1
  Spn:  SP1445_1
  Sau:  SA0376_1
  Lin:  lin0511 lin1081_1
  Bsu:  BS_guaA_1
  Bha:  BH0607_1
  Syn:  slr0213_1 slr0541
  Nos:  all2846_1
  Eco:  guaA_1
  EcZ:  ZguaA_1
  Ecs:  ECs3369_1
  Ype:  YPO2870_1
  Sty:  STM2437 STM2510_1
  Vch:  VC0768_1
  Pae:  PA0531 PA1729 PA1742 PA3769_1
  Hin:  HI0221.1_1 HI0222_1
  Pmu:  PM0293_1
  Xfa:  XF0560 XF2429_1
  Nme:  NMB1920_1
  NmA:  NMA0534_1
  Rso:  RSc0213 RSc1158 RSc1431_1
  Hpy:  HP0409_1
  jHp:  jhp0972_1
  Cje:  Cj1248_1
  Atu:  AGc389 AGc480_1 AGc4818
  Sme:  SMc00394_1 SMc03236
  Bme:  BMEII0887_1
  Mlo:  mll4216 mll8746 mlr6905 mlr6950_1
  Ccr:  CC0409 CC1620_1
  Cpn:  CPn0171_1
  Bbu:  BBB18_1
_______

[F] COG0519 GMP synthase, PP-ATPase domain/subunit
  Afu:  AF0253
  Hbs:  VNG1829G
  Mac:  MA4511
  Mth:  MTH710
  Mja:  MJ1131
  Mka:  MK0363
  Tac:  Ta1361
  Tvo:  TVN0293
  Pho:  PH1347
  Pab:  PAB2417
  Pya:  PAE3369_2
  Sso:  SSO3232
  Ape:  APE2452_2
  Sce:  YMR217w_2
  Spo:  SPAP7G5.02c_2
  Aae:  aq_236_2
  Tma:  TM1820_2
  Fnu:  FN1444_2
  Dra:  DR1874_2
  Cac:  CAC2700_2
  Cgl:  Cgl0591_2
  Mtu:  Rv3396c_2
  MtC:  MT3504_2
  Mle:  ML0395_2
  Lla:  L115968_2
  Spy:  SPy1204_2
  Spn:  SP1445_2
  Sau:  SA0376_2
  Lin:  lin1081_2
  Bsu:  BS_guaA_2
  Bha:  BH0607_2
  Syn:  slr0213_2
  Nos:  all2846_2
  Eco:  guaA_2
  EcZ:  ZguaA_2
  Ecs:  ECs3369_2
  Ype:  YPO2870_2
  Sty:  STM2510_2
  Vch:  VC0768_2
  Pae:  PA3769_2
  Hin:  HI0222_2
  Pmu:  PM0293_2
  Xfa:  XF2429_2
  Nme:  NMB1920_2
  NmA:  NMA0534_2
  Rso:  RSc1431_2
  Hpy:  HP0409_2
  jHp:  jhp0972_2
  Cje:  Cj1248_2
  Atu:  AGc480_2
  Sme:  SMc00394_2
  Bme:  BMEII0887_2
  Mlo:  mlr6950_2
  Ccr:  CC1620_2
  Cpn:  CPn0171_2
  Bbu:  BBB18_2
_______

[E] COG0520 Selenocysteine lyase
  Hbs:  VNG2471G
  Mac:  MA0236 MA1950
  Mth:  MTH1389
  Mka:  MK1437
  Pho:  PH0626
  Pab:  PAB0157 PAB0943
  Sso:  SSO2215
  Ape:  APE1754 APE2023
  Spo:  SPAC11D3.10 SPBC660.12c SPCC777.03c
  Tma:  TM1371
  Fnu:  FN0447
  Dra:  DR0028 DR0151
  Cac:  CAC2354 CAC2805 CAC3291
  Cgl:  Cgl0203 Cgl1524
  Mtu:  Rv1464 Rv3700c Rv3778c
  MtC:  MT1511 MT3803 MT3887
  Mle:  ML0117 ML0596 ML0842
  Lla:  L32195
  Spy:  SPy0288
  Spn:  SP0869
  Sau:  SA0776
  Lin:  lin2508
  Bsu:  BS_ycbU BS_yurW
  Bha:  BH3469 BH4056
  Syn:  slr0077 slr2143
  Nos:  alr2495 alr3210 alr3867
  Eco:  csdA csdB
  EcZ:  Z2708 Z4127
  Ecs:  ECs2387 ECs3670
  Ype:  YPO1028 YPO2400
  Sty:  STM1373 STM2984
  Vch:  VC1184 VC2309
  Pae:  PA0813 PA2394 PA2958 PA3667
  Hin:  HI1295 HI1343
  Pmu:  PM0882
  Xfa:  XF1473
  Rso:  RSp0696
  Hpy:  HP0405
  jHp:  jhp0976
  Cje:  Cj0791c
  Atu:  AGc3344
  Sme:  SMc00277 SMc00533
  Bme:  BMEI1039
  Mlo:  mll5421 mlr0021 mlr0102
  Ccr:  CC0939 CC1860 CC2885
  Ctr:  CT687
  Cpn:  CPn0689
  Tpa:  TP0614
  Bbu:  BB0084
  Uur:  UU454
  Mpu:  MYPU_1720 MYPU_1730
  Mpn:  MPN487
  Mge:  MG336
_______

[H] COG0521 Molybdopterin biosynthesis enzymes
  Afu:  AF0265
  Hbs:  VNG1822G
  Mac:  MA0187
  Mth:  MTH1861
  Mja:  MJ0167
  Mka:  MK0553
  Tac:  Ta0493
  Tvo:  TVN0751
  Pho:  PH0523
  Pab:  PAB1354
  Pya:  PAE0969
  Sso:  SSO0019
  Ape:  APE0077
  Aae:  aq_061
  Dra:  DR1292
  Cac:  CAC0283 CAC1994 CAC2022
  Cgl:  Cgl0211 Cgl0853 Cgl1165
  Mtu:  Rv0865 Rv0984
  MtC:  MT0888 MT1012
  Mle:  ML0177
  Sau:  SA2070
  Lin:  lin1040
  Bsu:  BS_moaB
  Bha:  BH3022
  Nos:  all0800
  Eco:  moaB mog
  EcZ:  ZmoaB Zmog
  Ecs:  ECs0009 ECs0860
  Ype:  YPO0464
  Sty:  STM0008 STM0803
  Vch:  VC1025
  Pae:  PA3029 PA3915
  Hin:  HI0336
  Pmu:  PM2003
  Rso:  RSc0943
  Hpy:  HP0799
  jHp:  jhp0735
  Cje:  Cj0725c
  Atu:  AGc1121
  Sme:  SMc00863
  Bme:  BMEII0773
  Mlo:  mll7421
  Ccr:  CC0015
_______

[J] COG0522 Ribosomal protein S4 and related proteins
  Afu:  AF2284
  Hbs:  VNG1133G
  Mac:  MA1109
  Mth:  MTH35
  Mja:  MJ0190
  Mka:  MK0398 MK1472
  Tac:  Ta1032
  Tvo:  TVN0563
  Pho:  PH1640
  Pab:  PAB0361
  Pya:  PAE3084
  Sso:  SSO0073
  Ape:  APE1739
  Sce:  YBR189w YHR148w YNL137c YPL081w
  Spo:  SPAC19D5.05c SPAC24H6.07 SPBC13G1.01c SPBC29A3.12
  Ecu:  ECU05g0920 ECU05g1320
  Aae:  aq_072
  Tma:  TM1473
  Fnu:  FN1284
  Dra:  DR2127
  Cac:  CAC1478 CAC1594 CAC3105
  Cgl:  Cgl0548
  Mtu:  Rv3458c
  MtC:  MT3565
  Mle:  ML1958
  Lla:  L0381
  Spy:  SPy2178
  Spn:  SP0085
  Sau:  SAS052
  Lin:  lin1638
  Bsu:  BS_rpsD
  Bha:  BH3209
  Syn:  slr0469
  Nos:  alr2737
  Eco:  rpsD
  EcZ:  ZrpsD
  Ecs:  ECs4161
  Ype:  YPO0233
  Sty:  STM3416
  Buc:  BU500
  Vch:  VC2572
  Pae:  PA4239
  Hin:  HI0801
  Pmu:  PM1391
  Xfa:  XF1175
  Nme:  NMB0167
  NmA:  NMA0104
  Rso:  RSc2994
  Hpy:  HP1294
  jHp:  jhp1214
  Cje:  Cj1594
  Atu:  AGc3413
  Sme:  SMc00485
  Bme:  BMEI1133
  Mlo:  mlr0045
  Ccr:  CC2511
  Rpr:  RP345
  Rco:  RC0468
  Ctr:  CT626
  Cpn:  CPn0733
  Tpa:  TP0306
  Bbu:  BB0615
  Uur:  UU498
  Mpu:  MYPU_7160
  Mpn:  MPN446
  Mge:  MG311
_______

[R] COG0523 Putative GTPases (G3E family)
  Mac:  MA0433 MA0856 MA4381 MA4382 MA4389 MA4556
  Sce:  YNR029c
  Spo:  SPBC15D4.05
  Aae:  aq_147
  Fnu:  FN0779
  Dra:  DR2408
  Cgl:  Cgl0672
  Mtu:  Rv0106
  MtC:  MT0115
  Sau:  SA0410 SA0642 SA2368
  Bsu:  BS_yciC
  Bha:  BH0366 BH1519 BH1790
  Syn:  slr0502 slr0609
  Nos:  all1751 all3392 all4722 alr1093
  Eco:  yeiR yjiA
  EcZ:  Z5951 ZyeiR
  Ecs:  ECs3065 ECs5311
  Ype:  YPO1277
  Sty:  STM2212 STM4530
  Vch:  VCA0527
  Pae:  PA2945 PA4604 PA5532 PA5535
  Xfa:  XF1830
  Nme:  NMB1263
  NmA:  NMA1470
  Rso:  RSc0045 RSc0047 RSp0617
  Hpy:  HP0312
  jHp:  jhp0297
  Atu:  AGc5088 AGl2389 AGl3251 AGl3257 AGl732
  Sme:  SMb20133 SMc00684 SMc02978 SMc03799 SMc04304
  Bme:  BMEI0036 BMEI0694 BMEII0179 BMEII0308
  Mlo:  mll3580 mll5156 mlr1375
  Ccr:  CC0321
_______

[G] COG0524 Sugar kinases, ribokinase family
  Afu:  AF0356 AF0401
  Hbs:  VNG0158G VNG1851G VNG2516C
  Mac:  MA1373 MA1840 MA3267
  Mth:  MTH1544 MTH1841 MTH404 MTH668
  Mja:  MJ0406
  Mka:  MK0817
  Tac:  Ta0880
  Tvo:  TVN0979
  Pho:  PH1459 PH1578 PH1845
  Pab:  PAB0280 PAB0482 PAB1967
  Pya:  PAE0835 PAE3318
  Sso:  SSO0004 SSO0149 SSO2449 SSO3195
  Ape:  APE0012 APE0211 APE2106
  Sce:  YCR019w YCR036w YJR105w
  Spo:  SPAC4G8.14c SPBC16G5.02c SPBC1861.05_2 SPCC338.14
  Tma:  TM0067 TM0296 TM0415 TM0795 TM0960
  Dra:  DR0728 DR1525 DR2312_2 DR2553 DRA0055
  Cac:  CAC0395 CAC0424 CAC2684 CAC3498
  Cgl:  Cgl0158 Cgl1331 Cgl2273
  Mtu:  Rv2202c Rv2436
  MtC:  MT2258 MT2511
  Mle:  ML0873
  Lla:  L0021 L86157
  Spy:  SPy0638
  Spn:  SP0318
  Sau:  SA0258 SA0299_2 SA0300 SA1845
  Lin:  lin0403 lin2435_2
  Bsu:  BS_iolC BS_kdgK BS_rbsK BS_ydjE BS_yurL
  Bha:  BH1857 BH2319 BH3724 BH3728
  Syn:  slr0537 slr1448
  Nos:  all1784 alr0517 alr4681
  Eco:  gsk kdgK rbsK ydjH yegV yeiC yeiI_2
        yhfQ yihV
  EcZ:  Z2810 Z3263 Z3624 Z4734m Z5686 Zgsk ZkdgK
        ZrbsK ZyeiC ZyeiI_2 ZyihV
  Ecs:  ECs0530 ECs2481 ECs2903 ECs3052_2 ECs3058 ECs3242 ECs4224
        ECs4406 ECs4694 ECs4806 ECs5068
  Ype:  YPO0008 YPO1816 YPO2585_1 YPO3095 YPO3621 YPO3959 YPO3990
  Sty:  STM0491 STM1382_2 STM2144 STM3251 STM3547_2 STM3600 STM3612
        STM3793 STM3885 STM4024 STM4066 STM4430
  Vch:  VC1129 VCA0131 VCA0656 VCA0801
  Pae:  PA1950 PA2261 PA2344
  Hin:  HI0049 HI0505
  Pmu:  PM0152 PM1372 PM1849
  Xfa:  XF0366 XF1610
  Rso:  RSc1013 RSc1240_1 RSc2146 RSc2791 RSp1184 RSp1280
  Atu:  AGc118 AGc3442 AGc4170 AGc4560 AGc637 AGc706 AGl3287
        AGl468 AGl714_1 AGl78 AGl858GM
  Sme:  SMb21217 SMb21374 SMb21462 SMc00473 SMc01103 SMc01165_1 SMc01531
        SMc02164 SMc02846 SMc03138
  Bme:  BMEI1108 BMEI1779 BMEI1833 BMEII0089 BMEII0572_1
  Mlo:  mll0029 mll1743 mll4982_1 mll5335 mll6424_1 mll7216 mll7580
        mll7662 mlr1166 mlr2302 mlr3185 mlr3534 mlr3644 mlr6117
        mlr7223 mlr8492 msr6116
  Ccr:  CC0950 CC1057 CC1298_1 CC1496 CC3733
_______

[J] COG0525 Valyl-tRNA synthetase
  Afu:  AF2224
  Hbs:  VNG2547G
  Mac:  MA3052
  Mth:  MTH767
  Mja:  MJ1007
  Mka:  MK1424
  Tac:  Ta0040
  Tvo:  TVN0032
  Pho:  PH0314
  Pab:  PAB1255
  Pya:  PAE2297
  Sso:  SSO0899
  Ape:  APE1805
  Sce:  YGR094w
  Spo:  SPAC4A8.08c SPBC1709.02c
  Ecu:  ECU04g1140
  Aae:  aq_1413
  Tma:  TM1817
  Fnu:  FN2011
  Dra:  DR0148
  Cac:  CAC2399
  Cgl:  Cgl2325
  Mtu:  Rv2448c
  MtC:  MT2524
  Mle:  ML1472
  Lla:  L0351
  Spy:  SPy1568
  Spn:  SP0568
  Sau:  SA1488
  Lin:  lin1587
  Bsu:  BS_valS
  Bha:  BH3038
  Syn:  slr0557
  Nos:  all1318
  Eco:  valS
  EcZ:  ZvalS
  Ecs:  ECs5235
  Ype:  YPO3443
  Sty:  STM4475
  Buc:  BU366
  Vch:  VC2503
  Pae:  PA3834
  Hin:  HI1391
  Pmu:  PM0818
  Xfa:  XF0134
  Nme:  NMB0174
  NmA:  NMA0094
  Rso:  RSc2236 RSp0782
  Hpy:  HP1153
  jHp:  jhp1080
  Cje:  Cj0775c
  Atu:  AGc3157
  Sme:  SMc02080
  Bme:  BMEI1027
  Mlo:  mll1104
  Ccr:  CC1320
  Rpr:  RP687
  Rco:  RC1053
  Ctr:  CT302
  Cpn:  CPn0094
  Tpa:  TP1035
  Bbu:  BB0738
  Uur:  UU267
  Mpu:  MYPU_2570
  Mpn:  MPN480
  Mge:  MG334
_______

[OC] COG0526 Thiol-disulfide isomerase and thioredoxins
  Afu:  AF0515 AF0711 AF0769 AF1284 AF1675 AF2144 AF2145
        AF2248
  Hbs:  VNG0711C VNG1302H VNG2600G VNG6073G VNG6453G VNG7054 VNG7155
  Mac:  MA0965 MA2457_2 MA3212 MA3702 MA3938 MA3942 MA4254
        MA4683
  Mth:  MTH1095 MTH1745 MTH807 MTH895
  Mja:  MJ0307 MJ0581
  Tac:  Ta0125 Ta0866
  Tvo:  TVN0202 TVN0777
  Pho:  PH0178 PH1130
  Pab:  PAB1651 PAB2245
  Pya:  PAE2366
  Sso:  SSO0192 SSO0368 SSO1120 SSO2232
  Ape:  APE0641_2 APE0775 APE1722_1 APE1990 APE2273_1 APE2430 APE2496
        APE2568
  Sce:  YCL043c YCR083w YDR098c_1 YDR183w YDR286c YDR518w YER174c_1
        YGR209c YIL005w YLR043c YOL088c YOR288c YPR082c
  Spo:  SPAC13F5.05 SPAC17H9.14c SPAC1F5.02 SPAC2F3.13c_2 SPAC7D4.07c SPAC959.05c SPBC12D12.07c
        SPBC26H8.06_1 SPBC3D6.13c SPBC577.08c SPCC16A11.05c SPCC1840.08c
  Ecu:  ECU01g0720 ECU01g0930i ECU02g0850 ECU02g1270 ECU09g1560
  Aae:  aq_152 aq_1811 aq_1916 aq_419 aq_443
  Tma:  TM0868 TM0996
  Fnu:  FN0093 FN0187 FN0803_1 FN1123 FN1984_2 FN2067
  Dra:  DR0057 DR0189 DR0345 DR0944 DR0948 DRA0164 DRB0110
  Cac:  CAC0824 CAC1547 CAC3083
  Cgl:  Cgl0294 Cgl0411 Cgl0434 Cgl0890 Cgl2907 Cgl2917 Cgl3031
  Mtu:  Rv0508 Rv0526 Rv0816c Rv1470 Rv1471 Rv1677 Rv1732c
        Rv2874_2 Rv2878c Rv3673c Rv3914
  MtC:  MT0529 MT0548 MT0838 MT1516 MT1517 MT1716 MT1773
        MT2942_2 MT2946 MT3774 MT4033
  Mle:  ML1418 ML1818 ML2196 ML2300 ML2412 ML2703_2
  Lla:  L0195 L195348 L78434
  Spy:  SPy1558 SPy1835 SPy1971
  Spn:  SP0659 SP1000 SP1499 SP1776 SP1911
  Sau:  SA0758 SA0992 SA1565 SA2324 SAS023
  Lin:  lin1196 lin1650 lin2017 lin2256 lin2518 lin2963
  Bsu:  BS_resA BS_trxA BS_ybdE BS_ydbP BS_ydfQ BS_ykuV BS_ykvV
        BS_yneN BS_yolI BS_yosR BS_ytpP BS_yusE
  Bha:  BH1522 BH1577 BH1715 BH1717 BH1942 BH2664 BH2868
        BH3098 BH3253 BH3562
  Syn:  sll0486 sll0685 sll1057 sll1289 sll1596 sll1980 slr0233
        slr0623 slr0757 slr1139 ssr1391
  Nos:  all0513 all0737_2 all1866 all1893 all2341 all2367 all3328
        alr0052 alr0570 alr1013_1 alr1206 alr2201 alr2202 alr2205
        alr2885 alr3955 asl1510 asl1664 asl7641
  Eco:  dsbA dsbE trxA trxC
  EcZ:  ZdsbA ZdsbE ZtrxA ZtrxC
  Ecs:  ECs3084 ECs3448 ECs4714 ECs4783
  Ype:  YPO0015 YPO1947 YPO2740 YPO3270 YPO3868
  Sty:  PSLT011 STM1116 STM2248 STM2649 STM3193 STM3813 STM3915
        STM3997
  Buc:  BU430 BU597
  Vch:  VC0034 VC0306 VC1487 VC2051 VCA0752 VCA1011_1
  Pae:  PA0941 PA0953 PA1481 PA1751 PA2477 PA2694 PA3033
        PA5240 PA5489
  Hin:  HI0084 HI0846 HI0935 HI1095 HI1115 HI1215 HI1453
  Pmu:  PM0011 PM0028 PM0193 PM0447 PM0994 PM1705 PM1801
  Xfa:  XF1199 XF1436 XF1437 XF1489 XF1834 XF1990 XF2461
        XF2698
  Nme:  NMB0006 NMB0044_1 NMB0278 NMB0294 NMB0407 NMB0753 NMB1366
        NMB1845 NMB1958
  NmA:  NMA0253 NMA0290_1 NMA0493 NMA0612 NMA0966 NMA1578 NMA2078
        NMA2191 NMA2209
  Rso:  RSc0067 RSc0285 RSc0333 RSc1059 RSc1188 RSc2287 RSc2638
        RSc2784 RSc3254 RSp0563 RSp0898
  Hpy:  HP0824 HP1458
  jHp:  jhp0763 jhp1351
  Cje:  Cj0147c Cj0864 Cj0872 Cj1106 Cj1207c Cj1664 Cj1665
  Atu:  AGc37 AGc4873 AGl2458
  Sme:  SMb20194 SMb20213_2 SMc00726 SMc02350 SMc02761 SMc03851
  Bme:  BMEI0087 BMEI1849 BMEI2022
  Mlo:  mll3505 mll4330 mll5082 mll6589 mlr2838 mlr3278 mlr5775
  Ccr:  CC0220 CC2210 CC3539 CC3674
  Rpr:  RP002 RP397
  Rco:  RC0002 RC0544
  Ctr:  CT539 CT780 CT783
  Cpn:  CPn0659 CPn0926 CPn0933
  Tpa:  TP0100 TP0919
  Bbu:  BB0061
  Uur:  UU589
  Mpu:  MYPU_1840 MYPU_7070
  Mpn:  MPN263
  Mge:  MG124
_______

[E] COG0527 Aspartokinases
  Afu:  AF0700
  Hbs:  VNG2374Gm
  Mac:  MA0131
  Mth:  MTH802
  Mja:  MJ0571
  Mka:  MK0109 MK1535
  Tac:  Ta0364
  Pho:  PH0858 PH1086
  Pab:  PAB1674 PAB1675
  Pya:  PAE2877
  Sso:  SSO0876
  Ape:  APE1140
  Sce:  YER052c
  Spo:  SPBC19F5.04
  Aae:  aq_1152
  Tma:  TM0547_2 TM1518
  Dra:  DR1365
  Cac:  CAC0278 CAC1810
  Cgl:  Cgl0252
  Mtu:  Rv3709c
  MtC:  MT3812
  Mle:  ML2323
  Lla:  L0097
  Spn:  SP0413
  Sau:  SA1163 SA1225
  Lin:  lin1198 lin1475 lin2473
  Bsu:  BS_dapG BS_lysC BS_yclM
  Bha:  BH1500 BH2400 BH3096
  Syn:  slr0657
  Nos:  alr3644
  Eco:  lysC metL_1 thrA_1
  EcZ:  ZlysC ZmetL_1 ZthrA_1
  Ecs:  ECs0002_1 ECs4869_1 ECs5007
  Ype:  YPO0116_1 YPO0459_1 YPO3719
  Sty:  STM0002_1 STM4101_1 STM4220
  Buc:  BU194_1
  Vch:  VC0391 VC0547 VC2364_1 VC2684_1 VCA0822
  Pae:  PA0904
  Hin:  HI0089_1 HI1632
  Pmu:  PM0113_1 PM0937
  Xfa:  XF1116_1 XF2225_1
  Nme:  NMB1498
  NmA:  NMA1701
  Rso:  RSc1171
  Hpy:  HP1229
  jHp:  jhp1150
  Cje:  Cj0582
  Atu:  AGl1357
  Sme:  SMc02438
  Bme:  BMEI0189
  Mlo:  mll3437
  Ccr:  CC0843
  Rpr:  RP753
  Rco:  RC1164
  Ctr:  CT362
  Cpn:  CPn1049
_______

[F] COG0528 Uridylate kinase
  Afu:  AF2042
  Hbs:  VNG2015C
  Mac:  MA0372
  Mth:  MTH879
  Mja:  MJ1259
  Mka:  MK0760
  Tac:  Ta0486
  Tvo:  TVN0586
  Pho:  PH1408
  Pab:  PAB1870
  Pya:  PAE3159
  Sso:  SSO0976
  Ape:  APE0401
  Aae:  aq_713
  Tma:  TM1604
  Fnu:  FN1622
  Dra:  DR1511
  Cac:  CAC1789
  Cgl:  Cgl1977
  Mtu:  Rv2883c
  MtC:  MT2951
  Mle:  ML1591
  Lla:  L70624
  Spy:  SPy0462
  Spn:  SP0944
  Sau:  SA1101
  Lin:  lin1350
  Bsu:  BS_smbA
  Bha:  BH2425
  Syn:  sll0144
  Nos:  alr1207
  Eco:  pyrH
  EcZ:  ZpyrH
  Ecs:  ECs0173
  Ype:  YPO1046
  Sty:  STM0218
  Buc:  BU233
  Vch:  VC2258
  Pae:  PA3654
  Hin:  HI1065
  Pmu:  PM1986
  Xfa:  XF1058
  Nme:  NMB2103
  NmA:  NMA0326
  Rso:  RSc1406
  Hpy:  HP0777
  jHp:  jhp0714
  Cje:  Cj1274c
  Atu:  AGc2544
  Sme:  SMc02099
  Bme:  BMEI0825
  Mlo:  mll0643
  Ccr:  CC1921
  Rpr:  RP155
  Rco:  RC0198
  Ctr:  CT678
  Cpn:  CPn0698
  Tpa:  TP0099
  Bbu:  BB0571
  Uur:  UU513
  Mpu:  MYPU_2200
  Mpn:  MPN632
  Mge:  MG434
_______

[P] COG0529 Adenylylsulfate kinase and related kinases
  Afu:  AF0288
  Pab:  PAB0781
  Ape:  APE1195
  Sce:  YKL001c
  Spo:  SPAC1782.11
  Aae:  aq_1081_2
  Dra:  DRA0014
  Cac:  CAC0103
  Mtu:  Rv1286_2
  MtC:  MT1324_2
  Bsu:  BS_yisZ BS_ylnC
  Bha:  BH1489 BH3385
  Syn:  slr0676
  Eco:  cysC
  EcZ:  ZcysC
  Ecs:  ECs3604
  Ype:  YPO3364
  Sty:  STM2933
  Buc:  BU422
  Vch:  VC2558
  Pae:  PA1393 PA4442_2
  Xfa:  XF1501_2
  Rso:  RSc3166 RSp0166
  Cje:  Cj1415c
  Sme:  SMa0857_2 SMb21224_2
  Bme:  BMEI1754_2
  Mlo:  mlr7576_2
  Ccr:  CC1482_2
_______

[P] COG0530 Ca2+/Na+ antiporter
  Afu:  AF0251
  Hbs:  VNG0380G VNG2257G
  Mac:  MA2008 MA2817 MA3021
  Mth:  MTH1073 MTH1155
  Mja:  MJ0091
  Mka:  MK0404 MK0951
  Tac:  Ta1195
  Tvo:  TVN0404
  Pho:  PH0473
  Pab:  PAB1029
  Pya:  PAE0566 PAE1290
  Sso:  SSO1174 SSO3192
  Sce:  YDL206w YJR106w
  Spo:  SPAC3A12.06c
  Aae:  aq_066
  Tma:  TM0724
  Bha:  BH0465 BH2867
  Syn:  slr0681
  Eco:  yrbG
  EcZ:  ZyrbG
  Ecs:  ECs4075
  Ype:  YPO3576
  Sty:  STM3314
  Vch:  VC2522
  Pmu:  PM0428
  Sme:  SMb21369
  Tpa:  TP1034
  Bbu:  BB0164
_______

[E] COG0531 Amino acid transporters
  Afu:  AF1612_1 AF1774_1
  Hbs:  VNG0174G_1 VNG1240G_1 VNG6220G
  Mac:  MA0143 MA1328 MA2030 MA2286 MA2426 MA3379 MA4506
  Mth:  MTH546
  Mja:  MJ0609 MJ1196
  Mka:  MK1576
  Tac:  Ta0077 Ta0142 Ta0148 Ta0240 Ta0349m Ta0427 Ta0503
        Ta0620 Ta0645 Ta0661 Ta0671 Ta0789 Ta0853 Ta0877
        Ta1120 Ta1161m Ta1279 Ta1378
  Tvo:  TVN0151 TVN0218 TVN0510 TVN0708 TVN0718 TVN0763 TVN0787
        TVN0805 TVN0898 TVN0911 TVN0939 TVN1036 TVN1221 TVN1224
        TVN1238 TVN1262 TVN1355 TVN1423
  Pya:  PAE0556
  Sso:  SSO0786 SSO1009 SSO1069 SSO1173 SSO1291 SSO1463 SSO1693
        SSO1906 SSO2043 SSO2292 SSO2549 SSO2726 SSO2728 SSO3184
        SSO3189 SSO3224
  Ape:  APE0010_1
  Sce:  YBR235w YDL210w YGL077c YGR055w YHL036w YKL174c YNR056c
  Spo:  SPAC1039.01 SPAC11D3.08c SPAC9.10 SPAPB24D3.02c SPBC15C4.04c SPBC18H10.16 SPCC584.13
        SPCC74.04 SPCC794.03
  Ecu:  ECU06g1480
  Fnu:  FN0504
  Cac:  CAC0272 CAC0852 CAC2719 CAC2770 CAC2771 CAC3285 CAP0027
  Cgl:  Cgl0943
  Mtu:  Rv1979c Rv1999c Rv2320c Rv2690c Rv3253c
  MtC:  MT2031 MT2055 MT2383 MT2764 MT3351
  Mle:  ML1974
  Lla:  L0111 L112776 L119780 L125001 L138484 L58790 L69353
        L94890
  Spy:  SPy0016 SPy2088
  Spn:  SP1001
  Sau:  SA0541 SA1270 SA2229 SA2239 SA2396 SA2426
  Lin:  lin0648 lin2235 lin2462 lin2613
  Bsu:  BS_ybeC BS_ydaO BS_yecA BS_yfnA BS_yhdG BS_ykbA BS_yveA
        BS_yvsH
  Bha:  BH0994
  Syn:  slr0700
  Nos:  alr1519
  Eco:  aniC cadB potE xasA ybaT ycaM ycjJ
        ydgI yeeF ygjI yhfM yjeH yjeM
  EcZ:  Z1245 Z2605 ZcadB ZpotE ZxasA ZybaT ZycjJ
        ZyeeF ZygjI ZyhfM ZyjdE ZyjeH ZyjeM
  Ecs:  ECs0539 ECs0720 ECs0984 ECs1873 ECs2097 ECs2311 ECs2816
        ECs3960 ECs4221 ECs5097 ECs5114 ECs5122 ECs5137
  Ype:  YPO0655 YPO1200 YPO1557 YPO2306
  Sty:  STM0700 STM0969 STM1379 STM1477 STM2068 STM2359 STM2558
        STM3126 STM4294 STM4328 STM4345
  Vch:  VC0280 VC0433 VCA0847 VCA1062
  Pae:  PA0220 PA0322 PA1147 PA1194 PA1485 PA1819 PA2041
        PA3597 PA4023 PA4072 PA4804 PA5170 PA5510
  Hin:  HI0590
  Pmu:  PM0162 PM0807
  Xfa:  XF0408 XF2207 XF2208
  Rso:  RSc1588 RSp0282 RSp1046
  Atu:  AGc3885
  Sme:  SMa0678 SMa0684 SMa1667 SMa1668 SMc01597 SMc02616 SMc04147
  Bme:  BMEII0126 BMEII0909
  Mlo:  mll3075 mll6718 mll6735 mll7301 mll7315 mlr6736
  Ccr:  CC0426 CC1184 CC3126
  Rpr:  RP307 RP483
  Rco:  RC0411 RC0726
  Ctr:  CT216 CT374
  Cpn:  CPn0282 CPn1031
  Uur:  UU223 UU579
  Mpu:  MYPU_2970 MYPU_6610
  Mpn:  MPN095 MPN096 MPN308 MPN318 MPN319
  Mge:  MG225 MG226
_______

[J] COG0532 Translation initiation factor 2 (IF-2; GTPase)
  Afu:  AF0768
  Hbs:  VNG1997G
  Mac:  MA1525
  Mth:  MTH259
  Mja:  MJ0262_1 MJ0262_3
  Mka:  MK1564 MK1595
  Tac:  Ta1112
  Tvo:  TVN0453
  Pho:  PH1095_1 PH1095_3
  Pab:  PAB0755_1 PAB0755_3
  Pya:  PAE1513
  Sso:  SSO0228
  Ape:  APE2374
  Sce:  YAL035w_2 YOL023w
  Spo:  SPAC56F8.03 SPBC1271.15c
  Ecu:  ECU09g0070
  Aae:  aq_2032
  Tma:  TM0775
  Fnu:  FN2020
  Dra:  DR1799
  Cac:  CAC1802
  Cgl:  Cgl1939
  Mtu:  Rv2839c
  MtC:  MT2905
  Mle:  ML1556
  Lla:  L0372
  Spy:  SPy1721
  Spn:  SP0556
  Sau:  SA1112
  Lin:  lin1362
  Bsu:  BS_infB
  Bha:  BH2413
  Syn:  slr0744
  Nos:  alr3832
  Eco:  infB
  EcZ:  ZinfB
  Ecs:  ECs4049
  Ype:  YPO3496
  Sty:  STM3286
  Buc:  BU377
  Vch:  VC0643
  Pae:  PA4744
  Hin:  HI1284
  Pmu:  PM0759
  Xfa:  XF0235
  Nme:  NMB1643
  NmA:  NMA1897
  Rso:  RSc1289
  Hpy:  HP1048
  jHp:  jhp0377
  Cje:  Cj0136
  Atu:  AGc131
  Sme:  SMc02914
  Bme:  BMEI1965
  Mlo:  mlr5554
  Ccr:  CC0042
  Rpr:  RP552
  Rco:  RC0816
  Ctr:  CT096
  Cpn:  CPn0317
  Tpa:  TP0891
  Bbu:  BB0801
  Uur:  UU320
  Mpu:  MYPU_2050
  Mpn:  MPN155
  Mge:  MG142
_______

[O] COG0533 Metal-dependent proteases with possible chaperone activity
  Afu:  AF1112
  Hbs:  VNG2045G_1
  Mac:  MA3705_1
  Mth:  MTH1425_1
  Mja:  MJ1130_1
  Mka:  MK1458
  Tac:  Ta0324_1
  Tvo:  TVN1276_1
  Pho:  PH1987
  Pab:  PAB1159
  Pya:  PAE2430
  Sso:  SSO0434
  Ape:  APE1135
  Sce:  YDL104c YKR038c
  Spo:  SPBC16D10.03 SPCC1259.10
  Ecu:  ECU09g0140
  Aae:  aq_801
  Tma:  TM0145
  Fnu:  FN0549
  Dra:  DR0382
  Cac:  CAC0901
  Cgl:  Cgl0578
  Mtu:  Rv3419c
  MtC:  MT3528
  Mle:  ML0379
  Lla:  L93500
  Spy:  SPy1872
  Spn:  SP0129
  Sau:  SA1854
  Lin:  lin2181
  Bsu:  BS_ydiE
  Bha:  BH0548
  Syn:  slr0807
  Nos:  alr0110
  Eco:  ygjD
  EcZ:  ZygjD
  Ecs:  ECs3947
  Ype:  YPO0646
  Sty:  STM3208
  Buc:  BU058
  Vch:  VC0521
  Pae:  PA0580
  Hin:  HI0530
  Pmu:  PM1238
  Xfa:  XF0435
  Nme:  NMB1802
  NmA:  NMA0661
  Rso:  RSc2219
  Hpy:  HP1584
  jHp:  jhp1491
  Cje:  Cj1344c
  Atu:  AGc4806
  Sme:  SMc03230
  Bme:  BMEI0175
  Mlo:  mlr4224
  Ccr:  CC0071
  Rpr:  RP037
  Rco:  RC0061
  Ctr:  CT197
  Cpn:  CPn0194
  Tpa:  TP0680
  Bbu:  BB0769
  Uur:  UU411
  Mpu:  MYPU_1180
  Mpn:  MPN059
  Mge:  MG046
_______

[V] COG0534 Na+-driven multidrug efflux pump
  Afu:  AF1471
  Hbs:  VNG0720G VNG0727C VNG2214G VNG2404G
  Mac:  MA0334 MA1121 MA1842 MA2050 MA2694 MA3181 MA3191
  Mth:  MTH314
  Mja:  MJ0709
  Pho:  PH0575 PH0577 PH1807
  Pab:  PAB0243 PAB1438 PAB1439
  Ape:  APE1773 APE2414
  Sce:  YDR338c YHR032w
  Spo:  SPAC11D3.06 SPAC323.07c SPCC4B3.13
  Aae:  aq_128
  Tma:  TM0815 TM1701
  Fnu:  FN0162 FN0667 FN0944 FN1151 FN1469 FN1653 FN1726
        FN1789 FN1940
  Dra:  DR0107 DR0792
  Cac:  CAC0847 CAC0883 CAC1611 CAC1612 CAC2485 CAC3295 CAC3354
        CAC3444
  Cgl:  Cgl1936
  Mtu:  Rv2836c
  MtC:  MT2902
  Lla:  L112499 L154438 L170983
  Spy:  SPy0045
  Spn:  SP1166 SP1939 SP2065
  Sau:  SA0323
  Lin:  lin0003 lin0614 lin0989 lin1960 lin2192 lin2873
  Bsu:  BS_yisQ BS_yoeA BS_yojI BS_ypnP
  Bha:  BH0860 BH0886 BH1150 BH2163 BH2936 BH4045
  Syn:  slr0896 slr1543
  Eco:  dinF norM yeeO
  EcZ:  Z3143 Z3144 ZdinF ZydhE
  Ecs:  ECs2372 ECs2781 ECs2782 ECs5027
  Ype:  YPO1571 YPO2392
  Sty:  STM1425 STM2013 STM4238
  Vch:  VC0090 VC0650 VC1540 VC1631 VC2671 VCA0989
  Pae:  PA1361 PA4821 PA5294
  Hin:  HI1612
  Pmu:  PM0651
  Xfa:  XF2686
  Nme:  NMB0812
  NmA:  NMA1022
  Rso:  RSc1180 RSp0164 RSp0283 RSp1213
  Hpy:  HP0759 HP1184
  jHp:  jhp0696 jhp1110
  Cje:  Cj0560 Cj0619
  Atu:  AGc3941 AGl2334 AGpA627
  Sme:  SMc01211 SMc02244
  Bme:  BMEI1585 BMEI1612
  Mlo:  mll4906 mll6207 mlr1521 mlr5680
  Ccr:  CC2020
  Tpa:  TP0901
  Bbu:  BB0473 BB0583 BB0584
  Uur:  UU583 UU584
  Mpu:  MYPU_2930 MYPU_7380
  Mpn:  MPN661
  Mge:  MG447
_______

[R] COG0535 Predicted Fe-S oxidoreductases
  Afu:  AF0577 AF0918 AF1125 AF1615 AF2009_2 AF2104 AF2413
  Hbs:  VNG1184Gm VNG1185G
  Mac:  MA0175 MA0573 MA0794 MA1221 MA1302 MA1520 MA2936
        MA3035 MA3185 MA4151 MA4195 MA4279 MA4422
  Mth:  MTH1643_2 MTH1785 MTH1871
  Mja:  MJ0804 MJ1093
  Mka:  MK0582 MK0896_2 MK0980 MK1086_2 MK1345 MK1427
  Tac:  Ta0276 Ta0631m Ta1356
  Tvo:  TVN0299 TVN0838 TVN1326
  Pho:  PH0185 PH0827_2 PH1017 PH1966
  Pab:  PAB0111 PAB0648 PAB1151 PAB1702
  Pya:  PAE0289 PAE0579 PAE0596 PAE1252 PAE2147
  Sso:  SSO0373 SSO0546 SSO1631 SSO1632 SSO1839 SSO1840 SSO2211
        SSO2309
  Ape:  APE1652 APE1655
  Aae:  aq_2060_2
  Tma:  TM0824 TM0825
  Dra:  DRC0034
  Cac:  CAC0259_2 CAC1334 CAC2791 CAC2795 CAC2796 CAP0136
  Mtu:  Rv0693 Rv1681
  MtC:  MT0720 MT1721
  Lla:  L16911 L19128_1
  Sau:  SA1693_1
  Bsu:  BS_ybcQ BS_yfkA BS_ywiA BS_yydG
  Bha:  BH0889_1
  Syn:  slr0304 slr1507
  Nos:  all1517 all2029 alr3097 alr4269
  Pae:  PA0511 PA1989
  Rso:  RSc1728 RSc2181 RSp0725
  Sme:  SMa0814 SMb20208
  Mlo:  mll5855
_______

[R] COG0536 Predicted GTPase
  Sce:  YHR168w
  Spo:  SPAP8A3.11c
  Aae:  aq_2069
  Tma:  TM0098
  Fnu:  FN1918
  Dra:  DR0084
  Cac:  CAC1260
  Cgl:  Cgl2306
  Mtu:  Rv2440c
  MtC:  MT2516
  Mle:  ML1465
  Lla:  L0160
  Spy:  SPy1333
  Spn:  SP1079
  Sau:  SA1470
  Lin:  lin1572
  Bsu:  BS_obg
  Bha:  BH1213
  Syn:  slr1090
  Nos:  alr3739
  Eco:  yhbZ
  EcZ:  ZyhbZ
  Ecs:  ECs4062
  Ype:  YPO3509
  Sty:  STM3301
  Buc:  BU389
  Vch:  VC0437
  Pae:  PA4566
  Hin:  HI0877
  Pmu:  PM0351
  Xfa:  XF2422
  Nme:  NMB2086
  NmA:  NMA0345
  Rso:  RSc2820
  Hpy:  HP0303
  jHp:  jhp0288
  Cje:  Cj0096
  Atu:  AGc5047
  Sme:  SMc03775
  Bme:  BMEI0206
  Mlo:  mll4013
  Ccr:  CC0315
  Rpr:  RP843
  Rco:  RC1307
  Ctr:  CT418
  Cpn:  CPn0544
  Tpa:  TP0742
  Bbu:  BB0781
  Uur:  UU461
  Mpu:  MYPU_3530
  Mpn:  MPN563
  Mge:  MG384
_______

[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
  Afu:  AF2211
  Hbs:  VNG1864G VNG2186G
  Mac:  MA0811
  Mth:  MTH1823 MTH982
  Mja:  MJ0866
  Tac:  Ta1141 Ta1339
  Tvo:  TVN0249 TVN1217
  Pho:  PH0057 PH1001
  Pab:  PAB0657 PAB2301
  Pya:  PAE1643 PAE3162 PAE3559
  Sso:  SSO0249 SSO2163
  Ape:  APE0122 APE2495
  Sce:  YDL125c YDR305c
  Spo:  SPCC1442.14c SPCC4G3.02
  Ecu:  ECU08g0390 ECU10g0480
  Aae:  aq_141 aq_2159
  Fnu:  FN1873
  Dra:  DR1621
  Cac:  CAC1287 CAC1608
  Cgl:  Cgl1630 Cgl2549
  Mtu:  Rv0759c Rv1262c Rv2613c
  MtC:  MT0784 MT1300 MT2688
  Mle:  ML0455 ML2237
  Lla:  L25433 L60959
  Spy:  SPy0095 SPy1730
  Spn:  SP0521 SP0628
  Sau:  SA1656
  Lin:  lin2319
  Bsu:  BS_hit
  Bha:  BH1189 BH2743
  Syn:  slr1234
  Nos:  all2466_2 all4087
  Eco:  ycfF
  EcZ:  ZycfF
  Ecs:  ECs1481
  Ype:  YPO1611
  Sty:  STM1205 STM3167
  Buc:  BU357
  Vch:  VC1897 VC2075
  Pae:  PA0656 PA0959 PA1306 PA1906 PA3295
  Hin:  HI0961
  Pmu:  PM0073
  Xfa:  XF1810
  Nme:  NMB0602 NMB1619
  NmA:  NMA0806 NMA1818
  Rso:  RSc0455 RSp0494
  Hpy:  HP0404 HP0741
  jHp:  jhp0678 jhp0977
  Cje:  Cj0419 Cj0499 Cj0898
  Atu:  AGc148 AGc2530
  Sme:  SMc02106 SMc02904
  Bme:  BMEI0817 BMEI1907
  Mlo:  mll5502 mlr0662
  Ccr:  CC1157 CC2470 CC3657
  Rpr:  RP317
  Rco:  RC0431
  Ctr:  CT385
  Cpn:  CPn0488
  Bbu:  BB0379
  Uur:  UU272
  Mpu:  MYPU_0080
  Mpn:  MPN273
  Mge:  MG132
_______

[C] COG0538 Isocitrate dehydrogenases
  Afu:  AF0647
  Hbs:  VNG1873G
  Tac:  Ta0117
  Tvo:  TVN0195
  Pya:  PAE1651
  Sso:  SSO2182
  Ape:  APE0689
  Sce:  YDL066w YLR174w YNL009w
  Spo:  SPAC6G10.08
  Aae:  aq_1512
  Tma:  TM1148
  Dra:  DR1540
  Mtu:  Rv3339c
  MtC:  MT3442
  Lla:  L71075
  Sau:  SA1517
  Lin:  lin1601
  Bsu:  BS_citC
  Bha:  BH3159
  Syn:  slr1289
  Nos:  alr1827
  Eco:  icd
  EcZ:  ZicdA
  Ecs:  ECs1608
  Ype:  YPO1641
  Sty:  STM1238
  Pae:  PA2623
  Pmu:  PM1606
  Rso:  RSc2490
  Hpy:  HP0027
  jHp:  jhp0023
  Atu:  AGc3429
  Sme:  SMc00480
  Bme:  BMEI0791
  Mlo:  mll0036
  Ccr:  CC2522
_______

[J] COG0539 Ribosomal protein S1
  Sce:  YMR229c_1
  Spo:  SPCC1183.07_1
  Aae:  aq_1485
  Tma:  TM1445
  Fnu:  FN1781_2
  Dra:  DR1983
  Cac:  CAC1847_2 CAC1964
  Cgl:  Cgl1323
  Mtu:  Rv1630
  MtC:  MT1666
  Mle:  ML1382
  Lla:  L0378
  Spy:  SPy0913
  Spn:  SP0862
  Sau:  SA1308
  Lin:  lin2052
  Bsu:  BS_ypfD
  Bha:  BH1636
  Syn:  slr1356 slr1984
  Nos:  all0136 alr1078
  Eco:  rpsA
  EcZ:  ZrpsA
  Ecs:  ECs0994
  Ype:  YPO1392
  Sty:  STM0981
  Buc:  BU309
  Vch:  VC1915
  Pae:  PA3162
  Hin:  HI1220
  Pmu:  PM0801
  Xfa:  XF2438
  Nme:  NMB1301
  NmA:  NMA1515
  Rso:  RSc0909
  Hpy:  HP0399
  jHp:  jhp0982
  Cje:  Cj0893c
  Atu:  AGl1496
  Sme:  SMc00335
  Bme:  BMEI1915
  Mlo:  mll5210
  Ccr:  CC3587
  Rpr:  RP521
  Rco:  RC0747
  Ctr:  CT098
  Cpn:  CPn0315
  Tpa:  TP0279_2
  Bbu:  BB0127
  Mpu:  MYPU_1300
_______

[F] COG0540 Aspartate carbamoyltransferase, catalytic chain
  Afu:  AF0106
  Hbs:  VNG6309G
  Mac:  MA4502
  Mth:  MTH1413
  Mja:  MJ1581
  Mka:  MK1480
  Tac:  Ta0575
  Tvo:  TVN0631
  Pho:  PH0720
  Pab:  PAB1498
  Pya:  PAE0770
  Sso:  SSO0614
  Ape:  APE1663
  Sce:  YJL130c_4
  Spo:  SPAC22G7.06c_4
  Aae:  aq_409
  Tma:  TM1642_1
  Fnu:  FN0419
  Dra:  DR1109
  Cac:  CAC2654
  Cgl:  Cgl1574
  Mtu:  Rv1380
  MtC:  MT1424
  Mle:  ML0532
  Lla:  L45002
  Spy:  SPy0832
  Spn:  SP1277
  Sau:  SA1043
  Lin:  lin1952
  Bsu:  BS_pyrB
  Bha:  BH2539
  Syn:  slr1476
  Nos:  all1681
  Eco:  pyrB
  EcZ:  ZpyrB
  Ecs:  ECs5222
  Ype:  YPO3588
  Sty:  STM4460
  Buc:  BU369
  Vch:  VC2510
  Pae:  PA0402
  Xfa:  XF2226
  Nme:  NMB0106
  NmA:  NMA0168
  Rso:  RSc0678
  Hpy:  HP1084
  jHp:  jhp0341
  Cje:  Cj1098
  Atu:  AGc2407
  Sme:  SMc01360
  Bme:  BMEII0670
  Mlo:  mlr0686
  Ccr:  CC2443
_______

[U] COG0541 Signal recognition particle GTPase
  Afu:  AF0622
  Hbs:  VNG2459G
  Mac:  MA4587
  Mth:  MTH1321
  Mja:  MJ0101
  Mka:  MK1612
  Tac:  Ta0515
  Tvo:  TVN0992
  Pho:  PH1694
  Pab:  PAB0320
  Pya:  PAE3365
  Sso:  SSO0971
  Ape:  APE1735
  Sce:  YPR088c
  Spo:  SPCC188.06c
  Ecu:  ECU04g0980
  Aae:  aq_1720
  Tma:  TM1565
  Fnu:  FN1393
  Dra:  DR1836
  Cac:  CAC1754
  Cgl:  Cgl2009
  Mtu:  Rv2916c
  MtC:  MT2984
  Mle:  ML1622
  Lla:  L0158
  Spy:  SPy1200
  Spn:  SP1287
  Sau:  SA1080
  Lin:  lin1915
  Bsu:  BS_ffh
  Bha:  BH2484
  Syn:  slr1531
  Nos:  alr1952
  Eco:  ffh
  EcZ:  Zffh
  Ecs:  ECs3473
  Ype:  YPO3296
  Sty:  STM2677
  Buc:  BU393
  Vch:  VC0560
  Pae:  PA3746
  Hin:  HI0106
  Pmu:  PM1183
  Xfa:  XF0073
  Nme:  NMB0295
  NmA:  NMA2190
  Rso:  RSc2811
  Hpy:  HP1152
  jHp:  jhp1079
  Cje:  Cj0709
  Atu:  AGc4890
  Sme:  SMc03857
  Bme:  BMEI0225
  Mlo:  mlr4379
  Ccr:  CC3653
  Rpr:  RP173
  Rco:  RC0214
  Ctr:  CT025
  Cpn:  CPn0115
  Tpa:  TP0416
  Bbu:  BB0694
  Uur:  UU091
  Mpu:  MYPU_3420
  Mpn:  MPN061
  Mge:  MG048
_______

[O] COG0542 ATPases with chaperone activity, ATP-binding subunit
  Mth:  MTH284
  Sce:  YDR258c YLL026w
  Spo:  SPBC16D10.08c SPBC4F6.17c
  Ecu:  ECU11g1420
  Aae:  aq_1296 aq_1672
  Tma:  TM0198 TM1391
  Fnu:  FN1941
  Dra:  DR0588 DR1046 DR1117
  Cac:  CAC0904 CAC0959 CAC1824 CAC3189
  Cgl:  Cgl1714 Cgl1741 Cgl2622 Cgl2721
  Mtu:  Rv0384c Rv2667_2 Rv3596c
  MtC:  MT0397 MT2741_2 MT3703
  Mle:  ML0235 ML2490
  Lla:  L0221 L0222 L166407
  Spy:  SPy0888 SPy1509 SPy2073
  Spn:  SP0338 SP0820 SP2194
  Sau:  SA0483 SA0835 SA2336
  Lin:  lin0264 lin0996 lin2309
  Bsu:  BS_clpC BS_clpE
  Bha:  BH0103 BH2179
  Syn:  sll0020 slr0156 slr1641
  Nos:  alr1963 alr2322 alr2999 alr5084
  Eco:  clpA clpB
  EcZ:  Z0254 ZclpA ZclpB
  Ecs:  ECs0223 ECs0968 ECs3455
  Ype:  YPO0506 YPO0971 YPO1368 YPO1471 YPO2946 YPO3275 YPO3599
  Sty:  STM0272 STM0945 STM2660
  Vch:  VC0711 VC1144 VCA0116
  Pae:  PA0090 PA0459 PA1662 PA2371 PA2620 PA2725 PA3365
        PA4542
  Hin:  HI0859
  Pmu:  PM1704
  Xfa:  XF0381 XF1443
  Nme:  NMB0836 NMB1472
  NmA:  NMA1045 NMA1683
  Rso:  RSc1335 RSc2464 RSp0749
  Hpy:  HP0033 HP0264
  jHp:  jhp0029 jhp0249
  Cje:  Cj0509c Cj1108
  Atu:  AGc2524 AGl1041 AGl1346
  Sme:  SMc02109 SMc02433
  Bme:  BMEI0195 BMEI0816
  Mlo:  mll0663 mll2335 mll3429
  Ccr:  CC0878 CC2468
  Rpr:  RP036
  Rco:  RC0059
  Ctr:  CT113 CT286
  Cpn:  CPn0144 CPn0437
  Tpa:  TP0071 TP0549 TP0801
  Bbu:  BB0369 BB0834
  Uur:  UU391
  Mpn:  MPN531
  Mge:  MG355
_______

[HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
  Afu:  AF0528
  Mac:  MA0584 MA3786
  Mth:  MTH1212
  Mja:  MJ1446
  Mka:  MK0564
  Tac:  Ta0047 Ta0403
  Tvo:  TVN0004 TVN1171
  Pho:  PH0878 PH1291 PH1874 PH1965
  Pab:  PAB0639 PAB1150 PAB1213 PAB1737 PAB1785
  Sso:  SSO0612
  Sce:  YIL043c YKL150w YML087c YML125c YOR037w
  Spo:  SPAC17H9.12c SPCC970.03
  Aae:  aq_1305 aq_2098
  Tma:  TM0334 TM1639
  Fnu:  FN0423
  Cac:  CAC1514 CAC1860 CAC2651
  Cgl:  Cgl2354_1 Cgl2732
  Mtu:  Rv0385 Rv1937_1
  MtC:  MT0398 MT1987_1
  Lla:  L183563
  Spn:  SP0963
  Lin:  lin1948
  Bsu:  BS_pyrDII
  Bha:  BH2535
  Eco:  ubiB
  EcZ:  ZubiB
  Ecs:  ECs4772
  Ype:  YPO3116 YPO3768
  Sty:  STM2093 STM2549 STM3979
  Vch:  VC0312
  Pae:  PA2514 PA2516 PA4331 PA5236
  Nme:  NMB1359
  NmA:  NMA1571
  Rso:  RSc1091 RSc2434
  Atu:  AGc2205
  Rpr:  RP006_2
  Rco:  RC0005_3
  Tpa:  TP0736
_______

[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
  Aae:  aq_1340
  Tma:  TM0694
  Fnu:  FN2017
  Dra:  DR1948
  Cac:  CAC2641
  Cgl:  Cgl2361
  Mtu:  Rv2462c
  MtC:  MT2537
  Mle:  ML1481
  Lla:  L0336
  Spy:  SPy1896
  Spn:  SP0400
  Sau:  SA1499
  Lin:  lin1306
  Bsu:  BS_tig
  Bha:  BH3053
  Syn:  sll0533
  Nos:  alr3681
  Eco:  tig
  EcZ:  Ztig
  Ecs:  ECs0490
  Ype:  YPO3158
  Sty:  STM0447
  Buc:  BU474
  Vch:  VC1923
  Pae:  PA1800
  Hin:  HI0713
  Pmu:  PM1975
  Xfa:  XF1186
  Nme:  NMB1313
  NmA:  NMA1526
  Rso:  RSc1710
  Hpy:  HP0795
  jHp:  jhp0731
  Cje:  Cj0193c
  Atu:  AGc3060
  Sme:  SMc02050
  Bme:  BMEI1069
  Mlo:  mll1054
  Ccr:  CC1964
  Rpr:  RP842
  Rco:  RC1306
  Ctr:  CT707
  Cpn:  CPn0848
  Tpa:  TP0506
  Bbu:  BB0610
  Uur:  UU347
  Mpu:  MYPU_1430_1 MYPU_2090
  Mpn:  MPN331
  Mge:  MG238
_______

[O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
  Sce:  YDR519w YLR449w_2 YML074c_2 YNL135c
  Spo:  SPAC27F1.06c SPBC1347.02 SPBC839.17c
  Dra:  DR1839
  Cgl:  Cgl0807
  Syn:  slr1761
  Nos:  alr0577
  Eco:  fklB fkpA
  EcZ:  ZfklB ZfkpA
  Ecs:  ECs4198 ECs5185
  Ype:  YPO0195 YPO3532
  Sty:  STM3453 STM4397
  Buc:  BU533
  Vch:  VC0354 VC2568 VCA0661
  Pae:  PA3262 PA3717 PA4572 PA5254
  Hin:  HI0574
  Pmu:  PM1349 PM1898
  Xfa:  XF0644 XF1605
  Nme:  NMB0027 NMB1567
  NmA:  NMA0273 NMA1756
  Rso:  RSc0784 RSc1565
  Ccr:  CC2799 CC3636
  Ctr:  CT541
  Cpn:  CPn0661
  Tpa:  TP0862
_______

[R] COG0546 Predicted phosphatases
  Afu:  AF0928
  Hbs:  VNG0102C VNG1480C VNG1772G VNG2608C
  Mac:  MA2967
  Mth:  MTH1503 MTH1504 MTH1793
  Pho:  PH1743
  Pab:  PAB0207
  Sce:  YOR131c
  Aae:  aq_1342
  Dra:  DR0729
  Cac:  CAC0418 CAC2496
  Cgl:  Cgl2189
  Mtu:  Rv2232 Rv2233 Rv3113
  MtC:  MT2292 MT3195
  Lla:  L126819 L194765
  Spy:  SPy0726
  Spn:  SP0104 SP0805 SP2064
  Sau:  SA0513 SA0530 SA1546
  Lin:  lin2624 lin2878
  Bsu:  BS_yvoE
  Bha:  BH0430 BH3587
  Syn:  sll1349 slr0458 slr0586 slr1762
  Nos:  all0135 all2681 alr0073 alr3258 alr4944 alr7073
  Eco:  gph
  EcZ:  Zgph
  Ecs:  ECs4227
  Ype:  YPO0156
  Sty:  STM3482
  Vch:  VC2624
  Pae:  PA0065 PA0608 PA2974 PA3172 PA3941
  Hin:  HI0565
  Pmu:  PM1620
  Xfa:  XF2470
  Nme:  NMB0620 NMB1830
  NmA:  NMA0625 NMA0828 NMA1688
  Rso:  RSc0581 RSc0897 RSc1042 RSc2880 RSp0485
  Hpy:  HP1207
  jHp:  jhp1130
  Cje:  Cj1233 Cj1477c
  Atu:  AGc1255 AGc2715 AGc2974
  Sme:  SMb20747 SMc00151 SMc00893 SMc01276
  Bme:  BMEI0975 BMEI0981 BMEI1634
  Mlo:  mlr0528 mlr5413
  Ccr:  CC1643 CC2305
  Tpa:  TP0554
  Bbu:  BB0676
  Uur:  UU115
_______

[E] COG0547 Anthranilate phosphoribosyltransferase
  Afu:  AF1604_2
  Hbs:  VNG1649G VNG1912G
  Mac:  MA2989
  Mth:  MTH1661
  Mja:  MJ0234
  Mka:  MK0678
  Tac:  Ta0804
  Tvo:  TVN1026
  Pab:  PAB2044
  Pya:  PAE2461
  Sso:  SSO0890
  Ape:  APE2551
  Sce:  YDR354w
  Spo:  SPBC16G5.08
  Aae:  aq_196 aq_209
  Tma:  TM0141_2
  Dra:  DR1767
  Cac:  CAC3161
  Cgl:  Cgl2973
  Mtu:  Rv2192c
  MtC:  MT2248
  Mle:  ML0883
  Lla:  L0052
  Spn:  SP1815
  Sau:  SA1201
  Lin:  lin1672
  Bsu:  BS_trpD
  Bha:  BH1660
  Syn:  sll1634 slr1867
  Nos:  all0409 all0601 alr1153
  Eco:  trpD_2 ybiB
  EcZ:  ZtrpD_2 ZybiB
  Ecs:  ECs0878 ECs1835_2
  Ype:  YPO2206 YPO2522
  Sty:  STM0822 STM1724_2
  Buc:  BU280
  Vch:  VC1172
  Pae:  PA0650 PA2609
  Hin:  HI1389
  Pmu:  PM0581
  Xfa:  XF0212
  Nme:  NMB0967
  NmA:  NMA1164
  Rso:  RSc0378 RSc2884 RSp0681
  Hpy:  HP1280
  jHp:  jhp1201
  Cje:  Cj0346_2
  Atu:  AGc3100 AGl1856_2
  Sme:  SMc00235
  Bme:  BMEI0844
  Mlo:  mlr0614
  Ccr:  CC1898
_______

[E] COG0548 Acetylglutamate kinase
  Afu:  AF1280
  Mac:  MA4515
  Mth:  MTH183
  Mja:  MJ0069
  Mka:  MK1631
  Pho:  PH1718
  Pab:  PAB0292
  Pya:  PAE2882
  Sso:  SSO0156
  Ape:  APE1461
  Sce:  YER069w_1
  Spo:  SPAC4G9.09c_1
  Aae:  aq_2068
  Tma:  TM1784
  Dra:  DR1420 DR2442
  Cac:  CAC2389
  Cgl:  Cgl1363
  Mtu:  Rv1654
  MtC:  MT1692
  Mle:  ML1408
  Lla:  L0107
  Sau:  SA0176
  Lin:  lin1631
  Bsu:  BS_argB
  Bha:  BH2898
  Syn:  slr1898
  Nos:  alr1245
  Eco:  argA_1 argB
  EcZ:  ZargA_1 ZargB
  Ecs:  ECs3675_1 ECs4888
  Ype:  YPO1022_1 YPO3925
  Sty:  STM2992_1 STM4122
  Buc:  BU049 BU456_1
  Vch:  VC2316_1 VC2643
  Pae:  PA5204_1 PA5323
  Pmu:  PM0828_1 PM1119
  Xfa:  XF1001_1
  Nme:  NMB1074 NMB1876_1
  NmA:  NMA0580_1 NMA1275
  Rso:  RSc0033 RSc1250_1
  Cje:  Cj0226
  Atu:  AGc666
  Sme:  SMc01726
  Bme:  BMEII0273
  Mlo:  mlr4826
  Ccr:  CC0283
  Rco:  RC0139
_______

[E] COG0549 Carbamate kinase
  Hbs:  VNG6316G
  Tac:  Ta1350m
  Tvo:  TVN0259
  Pho:  PH1282
  Pab:  PAB0593
  Pya:  PAE1552
  Ape:  APE1968
  Lla:  L0112 L92850 L93826
  Spy:  SPy1541
  Spn:  SP2151
  Sau:  SA1013 SA2425
  Syn:  sll0573
  Eco:  arcC yahI yqeA
  EcZ:  ZarcC ZyahI ZyqeA
  Ecs:  ECs0372 ECs0583 ECs3747
  Sty:  STM0532 STM4466
  Pae:  PA5173
  Hin:  HI0595
  Sme:  SMa0697
  Mpn:  MPN307
_______

[L] COG0550 Topoisomerase IA
  Afu:  AF1806_1
  Hbs:  VNG0349Gm_1
  Mac:  MA1789_1 MA2510_1
  Mth:  MTH1624_1
  Mja:  MJ1652_1
  Mka:  MK1604
  Tac:  Ta0063_1
  Tvo:  TVN0019_1
  Pho:  PH0622_1
  Pab:  PAB1430_1
  Pya:  PAE2993
  Sso:  SSO0907
  Ape:  APE1794
  Sce:  YLR234w
  Spo:  SPBC16G5.12c
  Ecu:  ECU04g1070
  Aae:  aq_657
  Tma:  TM0258_1
  Fnu:  FN1069_1
  Dra:  DR1374_1
  Cac:  CAC1785_1 CAC2947_1 CAC3567
  Cgl:  Cgl0309_1 Cgl1793
  Mtu:  Rv3646c_1
  MtC:  MT3749_1
  Mle:  ML0200_1
  Lla:  L0298_1
  Spy:  SPy1164_1
  Spn:  SP1263_1
  Sau:  SA1093_1 SA2051_1
  Lin:  lin1314_1
  Bsu:  BS_topA_1 BS_topB_1
  Bha:  BH2467_1 BH3387
  Syn:  slr2058_1
  Nos:  all2631 alr2780_1
  Eco:  topA_1 topB
  EcZ:  ZtopA_1 ZtopB
  Ecs:  ECs1846_1 ECs2469
  Ype:  YPO2165 YPO2218_1
  Sty:  STM1298 STM1714_1
  Buc:  BU284_1
  Vch:  VC1730_1 VC2043
  Pae:  PA3011_1
  Hin:  HI0444 HI1365_1
  Pmu:  PM0207 PM0615_1
  Xfa:  XF0920_1 XF1776 XF1845 XF1846 XF2059 XFa0003_1
  Nme:  NMB0118_1
  NmA:  NMA0156_1
  Rso:  RSc0066
  Hpy:  HP0116_1 HP0440
  jHp:  jhp0108_1 jhp0919 jhp0931
  Cje:  Cj1686c_1
  Atu:  AGc2398_1
  Sme:  SMc01364_1
  Bme:  BMEII0666_1
  Mlo:  mlr0839_1
  Ccr:  CC2451_1
  Rpr:  RP326_1
  Rco:  RC0449_1
  Ctr:  CT643_1
  Cpn:  CPn0769_1
  Tpa:  TP0394_1
  Bbu:  BB0828_1
  Uur:  UU590_1
  Mpu:  MYPU_4710
  Mpn:  MPN261_1
  Mge:  MG122_1
_______

[L] COG0551 Zn-finger domain associated with topoisomerase type I
  Afu:  AF1806_2
  Hbs:  VNG0349Gm_2
  Mac:  MA1789_2 MA2510_2
  Mth:  MTH1624_2
  Mja:  MJ0664 MJ1652_2
  Tac:  Ta0063_2
  Tvo:  TVN0019_2
  Pho:  PH0622_2
  Pab:  PAB1430_2
  Tma:  TM0258_2
  Fnu:  FN1069_2
  Cac:  CAC1785_2 CAC2947_2
  Lla:  L0298_2
  Spy:  SPy1164_2
  Spn:  SP1263_2
  Sau:  SA1093_2 SA2051_2
  Lin:  lin1314_2
  Bsu:  BS_topA_2 BS_topB_2
  Bha:  BH2467_2
  Eco:  topA_2 yrdD
  EcZ:  ZtopA_2 ZyrdD
  Ecs:  ECs1846_2 ECs4149
  Ype:  YPO0245 YPO2218_2
  Sty:  STM1714_2 STM3403
  Buc:  BU284_2
  Vch:  VC0050 VC1600 VC1730_2
  Pae:  PA3011_2
  Hin:  HI0656.1 HI1365_2
  Pmu:  PM0615_2 PM1269
  Xfa:  XFa0003_2
  Nme:  NMB0118_2
  NmA:  NMA0156_2
  Rso:  RSc3416_2
  Hpy:  HP0116_2
  jHp:  jhp0108_2 jhp0470
  Cje:  Cj1686c_2
  Ctr:  CT643_2
  Cpn:  CPn0769_2
  Tpa:  TP0394_2
  Uur:  UU590_2
  Mpn:  MPN261_2
  Mge:  MG122_2
_______

[U] COG0552 Signal recognition particle GTPase
  Afu:  AF2062
  Hbs:  VNG2462G
  Mac:  MA4109
  Mth:  MTH1608
  Mja:  MJ0291
  Mka:  MK1613
  Tac:  Ta1077
  Tvo:  TVN0532
  Pho:  PH1669
  Pab:  PAB2025
  Pya:  PAE3100
  Sso:  SSO0348
  Ape:  APE1081
  Sce:  YDR292c
  Spo:  SPBC3B9.03
  Ecu:  ECU10g0170
  Aae:  aq_920
  Tma:  TM0570
  Fnu:  FN1074
  Dra:  DR2260
  Cac:  CAC1752
  Cgl:  Cgl2013
  Mtu:  Rv2921c
  MtC:  MT2989
  Mle:  ML1628
  Lla:  L0206
  Spy:  SPy0569
  Spn:  SP1244
  Sau:  SA1078
  Lin:  lin1917
  Bsu:  BS_ftsY
  Bha:  BH2486
  Syn:  slr2102
  Nos:  all1759
  Eco:  ftsY
  EcZ:  ZftsY
  Ecs:  ECs4313
  Ype:  YPO3814
  Sty:  STM3571
  Buc:  BU024
  Vch:  VC0147
  Pae:  PA0373
  Hin:  HI0768
  Pmu:  PM1519
  Xfa:  XF1910
  Nme:  NMB0045
  NmA:  NMA0291
  Rso:  RSc0386
  Hpy:  HP0763
  jHp:  jhp0700
  Cje:  Cj1206c
  Atu:  AGc4881
  Sme:  SMc03854
  Bme:  BMEI0131
  Mlo:  mlr4320
  Ccr:  CC3679
  Rpr:  RP775
  Rco:  RC1205
  Ctr:  CT820
  Cpn:  CPn0972
  Tpa:  TP0578
  Bbu:  BB0076
  Uur:  UU141
  Mpu:  MYPU_6740
  Mpn:  MPN425
  Mge:  MG297
_______

[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family
  Afu:  AF2350
  Hbs:  VNG6139G VNG7099
  Mac:  MA0189
  Tvo:  TVN0682
  Pho:  PH0900
  Pab:  PAB0591
  Sso:  SSO1653 SSO1655
  Ape:  APE0413
  Sce:  YAL019w YBR073w YBR114w YBR245c YDR334w YER164w YFR038w
        YGL150c YGL163c YIL126w_1 YJR035w YLR032w YLR247c YOR191w
        YOR290c_1 YOR304w YPL082c
  Spo:  SPAC11E3.01c SPAC1250.01_1 SPAC13G6.01c SPAC144.05 SPAC15A10.03c SPAC1783.05 SPAC17A2.12
        SPAC20G8.08c SPAC22F3.03c SPAC25A8.01c SPAC3G6.01 SPAC3G6.12 SPBC1826.01c SPBC23E6.02
        SPBC582.10c SPBP35G2.10 SPCC1235.05c SPCC1620.14c_1 SPCC330.01c SPCP25A2.02c
  Ecu:  ECU01g0350 ECU03g1530 ECU06g0820 ECU09g0410 ECU09g1890 ECU10g1320
  Tma:  TM0990
  Fnu:  FN0414 FN1160 FN1386
  Dra:  DR1258 DR1259 DRB0136
  Cac:  CAC2996 CAC3303 CAC3441
  Cgl:  Cgl0717 Cgl1138 Cgl1599 Cgl1697
  Mtu:  Rv2101
  MtC:  MT2161
  Lla:  L104021
  Spy:  SPy0342
  Spn:  SP1523
  Lin:  lin1348 lin1685 pli0027
  Bsu:  BS_yqhH BS_ywqA
  Bha:  BH0969 BH2817 BH2913
  Syn:  sll1366
  Nos:  all4900 all7026 all7172 alr4398
  Eco:  hepA
  EcZ:  Z0067 Z5899
  Ecs:  ECs0063 ECs5261
  Ype:  YPO0517
  Sty:  STM0096
  Vch:  VC1760 VC2506
  Pae:  PA0799 PA3308
  Hin:  HI0616
  Pmu:  PM0696 PM1837
  Xfa:  XF0680 XF2295_1 XF2528
  Sme:  SMc02152
  Ctr:  CT555 CT708
  Cpn:  CPn0835 CPn0849
  Mpn:  MPN020
  Mge:  MG018
_______

[C] COG0554 Glycerol kinase
  Afu:  AF0866
  Hbs:  VNG1967G
  Tac:  Ta1096
  Tvo:  TVN1141
  Pab:  PAB2406
  Sso:  SSO1600 SSO2133
  Ape:  APE0306
  Sce:  YHL032c
  Aae:  aq_434
  Tma:  TM0952 TM1430
  Fnu:  FN1839
  Dra:  DR1928
  Cac:  CAC1321
  Cgl:  Cgl2828
  Mtu:  Rv3696c
  MtC:  MT3798
  Mle:  ML2314
  Lla:  L0014
  Spy:  SPy1684
  Spn:  SP2186
  Sau:  SA1141
  Lin:  lin1573
  Bsu:  BS_glpK
  Bha:  BH1093
  Syn:  slr1672
  Nos:  all1811
  Eco:  glpK
  EcZ:  ZglpK
  Ecs:  ECs4851
  Ype:  YPO3312
  Sty:  STM4086
  Vch:  VCA0744
  Pae:  PA1487 PA3579 PA3582
  Hin:  HI0691
  Pmu:  PM1446
  Xfa:  XF2268
  Rso:  RSc3052
  Atu:  AGc3493 AGl1914
  Sme:  SMb21009
  Bme:  BMEII0823 BMEII0824
  Mlo:  mll0700
  Ccr:  CC1223
  Bbu:  BB0241
  Mpu:  MYPU_2210
  Mpn:  MPN050
  Mge:  MG038
_______

[O] COG0555 ABC-type sulfate transport system, permease component
  Afu:  AF0093
  Hbs:  VNG1592G
  Mac:  MA0281 MA0324
  Mth:  MTH921
  Mja:  MJ1368
  Mka:  MK1522
  Tac:  Ta1051
  Tvo:  TVN0545
  Pho:  PH0154
  Pab:  PAB0102
  Pya:  PAE3570
  Sso:  SSO1032
  Dra:  DRA0168
  Cac:  CAC0280
  Mtu:  Rv2399c
  MtC:  MT2470
  Bha:  BH3128
  Syn:  slr1453
  Nos:  all0321
  Eco:  cysU
  EcZ:  ZcysU
  Ecs:  ECs3295
  Ype:  YPO3014
  Sty:  STM0427 STM2443
  Vch:  VC0539
  Pae:  PA0282
  Hin:  HI1475
  Pmu:  PM1109
  Xfa:  XF1345
  Nme:  NMB0881
  NmA:  NMA1100
  Rso:  RSc1345 RSc1792
  Atu:  AGc1503 AGl2652
  Sme:  SMb21132
  Bme:  BMEI0674 BMEI1840
  Mlo:  mlr1667
  Ccr:  CC1596
_______

[L] COG0556 Helicase subunit of the DNA excision repair complex
  Hbs:  VNG2390G
  Mac:  MA3323
  Mth:  MTH442
  Aae:  aq_1856
  Tma:  TM1753 TM1761
  Fnu:  FN0224
  Dra:  DR2275
  Cac:  CAC0502
  Cgl:  Cgl1335
  Mtu:  Rv1633
  MtC:  MT1669
  Mle:  ML1387
  Lla:  L0257
  Spy:  SPy1314
  Spn:  SP1238
  Sau:  SA0713
  Lin:  lin2632
  Bsu:  BS_uvrB
  Bha:  BH3595
  Syn:  sll0459
  Nos:  all1132
  Eco:  uvrB
  EcZ:  ZuvrB
  Ecs:  ECs0857
  Ype:  YPO1156
  Sty:  STM0798
  Vch:  VC1018
  Pae:  PA3138
  Hin:  HI1247
  Pmu:  PM0429
  Xfa:  XF0967
  Nme:  NMB1331
  NmA:  NMA1545
  Rso:  RSc1011
  Hpy:  HP1114
  jHp:  jhp1041
  Cje:  Cj0680c
  Atu:  AGc3636
  Sme:  SMc04231
  Bme:  BMEI0501
  Mlo:  mlr2631
  Ccr:  CC2981
  Rpr:  RP203
  Rco:  RC0266
  Ctr:  CT586
  Cpn:  CPn0801
  Tpa:  TP0116
  Bbu:  BB0836
  Uur:  UU120
  Mpu:  MYPU_0960
  Mpn:  MPN211
  Mge:  MG073
_______

[K] COG0557 Exoribonuclease R
  Hbs:  VNG2647G
  Sce:  YDR293c_2 YMR287c_2 YOL021c
  Spo:  SPAC2C4.07c SPBC26H8.10 SPBC609.01 SPCC16C4.09 SPCC23B6.06
  Ecu:  ECU03g0700
  Aae:  aq_2046
  Tma:  TM0722
  Fnu:  FN0608
  Dra:  DR0020 DR0353
  Cac:  CAC0715
  Cgl:  Cgl2185
  Lla:  L0323 L25961
  Spy:  SPy0503
  Spn:  SP0975
  Sau:  SA0735
  Lin:  lin2543
  Bsu:  BS_yvaJ
  Bha:  BH3553
  Syn:  sll1290 sll1910
  Nos:  all4450 alr1240
  Eco:  vacB
  EcZ:  ZvacB
  Ecs:  ECs5155
  Ype:  YPO0380
  Sty:  STM4368
  Buc:  BU565
  Vch:  VC2599
  Pae:  PA4937
  Hin:  HI0861
  Pmu:  PM1954
  Xfa:  XF1987
  Nme:  NMB0282 NMB1200
  NmA:  NMA1371 NMA2205
  Rso:  RSc1228 RSc2779
  Hpy:  HP1248
  jHp:  jhp1169
  Cje:  Cj0631c
  Atu:  AGc2395
  Sme:  SMc01365
  Bme:  BMEII0665
  Mlo:  mll0040 mlr0841
  Ccr:  CC2453
  Ctr:  CT397
  Cpn:  CPn0504
  Tpa:  TP0805
  Uur:  UU057
  Mpu:  MYPU_3510
  Mpn:  MPN243
  Mge:  MG104
_______

[I] COG0558 Phosphatidylglycerophosphate synthase
  Afu:  AF0263_2 AF1143 AF1744 AF2299_2
  Hbs:  VNG1020C VNG1030G
  Mac:  MA0264 MA0525
  Mth:  MTH1691
  Tac:  Ta0569
  Tvo:  TVN0621
  Pho:  PH0460 PH1219_2
  Pab:  PAB1041 PAB2433_2
  Pya:  PAE2176
  Sso:  SSO0556
  Ape:  APE1516 APE1526
  Sce:  YDL142c YPR113w
  Spo:  SPAC1D4.08 SPAC22A12.08c_2
  Ecu:  ECU01g1000
  Aae:  aq_1244 aq_1367_2 aq_1480 aq_2154 aq_958
  Tma:  TM1861
  Fnu:  FN1307 FN1709
  Cac:  CAC1814 CAC2024 CAC3596
  Cgl:  Cgl1629 Cgl1919
  Mtu:  Rv1822 Rv2612c Rv2746c
  MtC:  MT1870 MT2687 MT2817
  Mle:  ML0454 ML0979 ML2081
  Lla:  L29672
  Spy:  SPy2196
  Spn:  SP2222
  Sau:  SA1126
  Lin:  lin1433
  Bsu:  BS_pgsA
  Bha:  BH2386
  Syn:  sll1522
  Nos:  all4063
  Eco:  pgsA ynbA ynjF
  EcZ:  Z2319 Z2790 ZpgsA
  Ecs:  ECs2010 ECs2464 ECs2650
  Ype:  YPO1867 YPO2817
  Sty:  STM1945
  Vch:  VC1215 VC1667 VC1935
  Pae:  PA2541 PA2584
  Hin:  HI0123
  Pmu:  PM0856 PM2000
  Xfa:  XF2310
  Nme:  NMB1588
  NmA:  NMA1779
  Rso:  RSc1072
  Hpy:  HP1016
  jHp:  jhp0407
  Cje:  Cj1067
  Atu:  AGc2087
  Sme:  SMc00601 SMc02134 SMc02159
  Bme:  BMEI1252
  Mlo:  mlr7913 mlr7964
  Ccr:  CC1159_2 CC2908
  Rpr:  RP049
  Rco:  RC0075
  Ctr:  CT496 CT797
  Cpn:  CPn0615 CPn0947
  Tpa:  TP0256 TP0730
  Bbu:  BB0721
  Uur:  UU364
  Mpu:  MYPU_1680
  Mpn:  MPN253
  Mge:  MG114
_______

[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components
  Afu:  AF0224 AF0825 AF0961 AF1392
  Mja:  MJ1269
  Pya:  PAE1391 PAE2083 PAE3350
  Sso:  SSO2839
  Ape:  APE0922 APE1305 APE2522
  Tma:  TM1136
  Fnu:  FN1431
  Dra:  DR0281 DR1037 DR2121 DRA0262 DRA0321
  Cgl:  Cgl0907
  Spn:  SP0750
  Bha:  BH0250
  Syn:  slr0949 slr1200
  Nos:  all1284 all1950 alr2536
  Eco:  livH
  EcZ:  ZlivH
  Ecs:  ECs4304
  Ype:  YPO1188 YPO3807
  Sty:  STM3563
  Pae:  PA1073 PA4859 PA4912
  Rso:  RSc1751 RSc2040 RSc2248 RSc2440 RSc3341 RSp0014 RSp0705
  Cje:  Cj1017c
  Atu:  AGc2083 AGc2607 AGc4379 AGc4402 AGl1455 AGl704 AGpA780
        AGpA793
  Sme:  SMb20604 SMb20787 SMc00598 SMc01951 SMc02359 SMc03118
  Bme:  BMEI0258 BMEII0068 BMEII0102 BMEII0121 BMEII0341 BMEII0632 BMEII0874_1
  Mlo:  mll0760 mll3977 mll4888 mll5172 mll7173 mll7201 mlr5220
        mlr9035
_______

[E] COG0560 Phosphoserine phosphatase
  Afu:  AF2138_2
  Hbs:  VNG2423G
  Mac:  MA4429
  Mth:  MTH1626_1
  Mja:  MJ1594
  Mka:  MK0121
  Tac:  Ta0936 Ta1334
  Tvo:  TVN1082
  Pho:  PH1885
  Pab:  PAB1207
  Pya:  PAE2017
  Ape:  APE0683
  Sce:  YGR208w
  Spo:  SPBC3H7.07c
  Fnu:  FN0892
  Cac:  CAC0263 CAC2227
  Cgl:  Cgl0299 Cgl0409 Cgl2471_2
  Mtu:  Rv0505c Rv2483c_1 Rv3042c_2 Rv3661
  MtC:  MT0526 MT2556_1 MT3127_2 MT3761
  Mle:  ML1245_1 ML1727_2 ML2424
  Lla:  L0085
  Eco:  serB yfhB
  EcZ:  ZserB ZyfhB
  Ecs:  ECs3426 ECs5346
  Ype:  YPO0442 YPO1315 YPO2924
  Sty:  STM2197 STM2569 STM4578
  Vch:  VC1940 VC2345
  Pae:  PA0335 PA1089 PA1143 PA1757 PA3255 PA4960_2 PA5547
  Hin:  HI1033
  Pmu:  PM1657
  Xfa:  XF0214
  Nme:  NMB0981 NMB1075
  NmA:  NMA1179 NMA1278
  Rso:  RSc1640 RSc2626
  Hpy:  HP0652
  jHp:  jhp0597
  Cje:  Cj0282c Cj0733 Cj1435c
  Atu:  AGc3697
  Sme:  SMc01494
  Bme:  BMEI0615
  Mlo:  mlr1449
  Ccr:  CC1924 CC1962 CC2097
  Cpn:  CPn0914
_______

[R] COG0561 Predicted hydrolases of the HAD superfamily
  Afu:  AF0444
  Hbs:  VNG0718C
  Mac:  MA0317 MA0318 MA3544
  Mth:  MTH1071
  Mka:  MK0203
  Tac:  Ta0175
  Tvo:  TVN0280
  Pho:  PH1421
  Pab:  PAB2394
  Pya:  PAE3495
  Sso:  SSO0094 SSO2157
  Ape:  APE0766
  Sce:  YFL045c
  Spo:  SPAC1556.07 SPAC25B8.12c SPBC215.10
  Ecu:  ECU05g0260
  Tma:  TM0651
  Fnu:  FN0391 FN0869
  Dra:  DR0240 DR1329 DR2147
  Cac:  CAC0522 CAC0629 CAC0698 CAC2244 CAC2423 CAC2941 CAC3035
        CAP0070
  Cgl:  Cgl0894 Cgl2568 Cgl2829
  Mtu:  Rv3813c
  MtC:  MT3922
  Mle:  ML0089
  Lla:  L1009 L106425 L112952 L143879_1 L165449 L173313 L197055
        L22687 L41779 L86251
  Spy:  SPy0567 SPy0568 SPy0617 SPy1700 SPy1737 SPy1781_1
  Spn:  SP0286 SP0923 SP1245 SP1246 SP1291 SP1451 SP1538_1
        SP1997_1
  Sau:  SA0517 SA0832 SA1167 SA1209 SA1957 SA2005 SA2313
  Lin:  lin0029 lin0196 lin0298 lin0302 lin0440 lin0668 lin1028
        lin2311 lin2364 lin2453 lin2721 lin2847
  Bsu:  BS_ycsE BS_yhaX BS_yhjK BS_yitU BS_ykrA BS_ywpJ BS_ywtE
        BS_yxeH
  Bha:  BH0497 BH0846 BH1151 BH1746 BH2659 BH2692 BH2906
  Syn:  sll0045_2 sll1524 slr0953
  Nos:  all0376 alr3714 alr3950
  Eco:  cof ybhA ybiV ybjI yidA yigLm
  EcZ:  Z1044 Z1071 Z5347 Zcof ZybhA ZyidA
  Ecs:  ECs0500 ECs0794 ECs0899 ECs0924 ECs4632 ECs4756
  Ype:  YPO1148 YPO3148 YPO3829 YPO4093
  Sty:  STM0457 STM0784 STM0840 STM0842 STM0867 STM3831 STM3962
        STM4010
  Buc:  BU028 BU029
  Vch:  VC0134 VC1364 VCA0243
  Hin:  HI0003 HI0597
  Pmu:  PM0231 PM1047 PM1243 PM1555 PM1629
  Nme:  NMB1663
  NmA:  NMA1921
  Rso:  RSc1263
  Atu:  AGc1175
  Sme:  SMc04299
  Mlo:  mll1014
  Ctr:  CT103
  Cpn:  CPn0407
  Tpa:  TP0290
  Bbu:  BB0068 BB0421
  Uur:  UU174 UU569
  Mpu:  MYPU_1380 MYPU_2440 MYPU_3010 MYPU_5440 MYPU_5490
  Mpn:  MPN264 MPN381 MPN383 MPN427
  Mge:  MG125 MG263 MG265
_______

[M] COG0562 UDP-galactopyranose mutase
  Mth:  MTH344
  Dra:  DRA0367
  Cac:  CAC2169
  Cgl:  Cgl2826
  Mtu:  Rv3809c
  MtC:  MT3916
  Mle:  ML0092
  Eco:  glf
  Sty:  STM0719
  Cje:  Cj1439c
  Atu:  AGl1762
  Mpn:  MPN278
  Mge:  MG137
_______

[F] COG0563 Adenylate kinase and related kinases
  Afu:  AF0676
  Hbs:  VNG1724G
  Mac:  MA1096
  Pho:  PH1117
  Pab:  PAB0739
  Sce:  YDR226w YER170w YKL024c
  Spo:  SPAC4G9.03 SPCC1795.05c
  Ecu:  ECU06g0650
  Aae:  aq_078
  Tma:  TM1479
  Fnu:  FN0012 FN1298
  Dra:  DR0202 DR0494 DR0974 DR2117 DR2273
  Cac:  CAC2481 CAC3112
  Cgl:  Cgl0315 Cgl0542 Cgl1057
  Mtu:  Rv0733
  MtC:  MT0757
  Mle:  ML1832
  Lla:  L140714 L16101 L88237
  Spy:  SPy0074 SPy1995
  Spn:  SP0231 SP0837
  Sau:  SA2027
  Lin:  lin1175 lin1449 lin2760
  Bsu:  BS_adk BS_yqaC
  Bha:  BH0155 BH1014
  Syn:  sll1059 sll1815
  Nos:  all3160 all4196 alr0068 alr4795
  Eco:  adk
  EcZ:  Zadk
  Ecs:  ECs0527
  Ype:  YPO3118
  Sty:  STM0488
  Buc:  BU484
  Vch:  VC0986
  Pae:  PA3686 PA4799
  Hin:  HI0349
  Pmu:  PM0284
  Xfa:  XF0275
  Nme:  NMB0823
  NmA:  NMA1032
  Rso:  RSc2533
  Hpy:  HP0618
  jHp:  jhp0561
  Cje:  Cj0639c
  Atu:  AGc2655 AGc3521
  Sme:  SMc01288 SMc01742
  Bme:  BMEI0778
  Mlo:  mlr0322 mlr5488
  Ccr:  CC1269
  Rpr:  RP638
  Rco:  RC0985
  Ctr:  CT128
  Cpn:  CPn0244
  Tpa:  TP0595
  Bbu:  BB0417
  Uur:  UU251
  Mpu:  MYPU_5670
  Mpn:  MPN185
  Mge:  MG171
_______

[J] COG0564 Pseudouridylate synthases, 23S RNA-specific
  Sce:  YDL036c YGR169c YLR165c YOL066c_1
  Spo:  SPAC18B11.02c
  Ecu:  ECU05g0680
  Aae:  aq_1758
  Tma:  TM0462 TM0940
  Fnu:  FN0651 FN1026 FN1372
  Dra:  DR0961 DR1684 DR1789
  Cac:  CAC1015 CAC1266 CAC2114
  Cgl:  Cgl0316 Cgl2087 Cgl2881
  Mtu:  Rv1540 Rv3300c
  MtC:  MT1592 MT3399
  Mle:  ML1200
  Lla:  L164789 L167555 L25787
  Spy:  SPy0827 SPy1127 SPy2063
  Spn:  SP0929 SP1099 SP2011
  Sau:  SA0866 SA1040 SA1668
  Lin:  lin0968 lin1957 lin2346
  Bsu:  BS_yhcT BS_yjbO BS_ylyB
  Bha:  BH2542 BH2847
  Syn:  slr1592 slr1629
  Nos:  all4080 alr0522
  Eco:  rluA rluC sfhB yqcB
  EcZ:  Z4107 ZsfhB ZyabO ZyceC
  Ecs:  ECs0062 ECs1464 ECs3457 ECs3651
  Ype:  YPO0497 YPO1038 YPO1591 YPO3277
  Sty:  STM0095 STM1187 STM2662 STM2964
  Buc:  BU348 BU401
  Vch:  VC0709 VC0888 VC1668 VC2028 VC2505 VCA0104
  Pae:  PA2043 PA2975 PA3246 PA4544
  Hin:  HI0042 HI0176 HI0412 HI0617 HI1435
  Pmu:  PM0479 PM0633 PM0992 PM1719 PM1836
  Xfa:  XF0939 XF2606
  Nme:  NMB0198 NMB0704 NMB0867 NMB2018
  NmA:  NMA0070 NMA0422 NMA0908 NMA1085
  Rso:  RSc1041 RSc1628
  Hpy:  HP0347 HP0745 HP0956
  jHp:  jhp0321 jhp0682 jhp0890
  Cje:  Cj0022c Cj0708 Cj1280c
  Atu:  AGc2714 AGc4432 AGl1625
  Sme:  SMc00647 SMc01275
  Bme:  BMEI0377 BMEI0983
  Mlo:  mlr0334 mlr3740
  Ccr:  CC0453 CC1284 CC1980
  Rpr:  RP258 RP846
  Rco:  RC0344 RC1310
  Ctr:  CT106 CT658
  Cpn:  CPn0403 CPn0719
  Tpa:  TP0154 TP0231 TP0339
  Bbu:  BB0018 BB0815
  Uur:  UU113 UU313
  Mpu:  MYPU_1170 MYPU_2980
  Mpn:  MPN292 MPN548
  Mge:  MG209 MG370
_______

[J] COG0565 rRNA methylase
  Afu:  AF1801
  Hbs:  VNG1347C
  Mac:  MA0682
  Mth:  MTH1849
  Mja:  MJ1476
  Mka:  MK0519
  Tac:  Ta1010m
  Tvo:  TVN0579
  Sso:  SSO0747
  Ape:  APE0555
  Dra:  DR0576
  Syn:  slr0120
  Nos:  alr4542
  Eco:  lasT yfhQ
  EcZ:  Z3799 ZlasT
  Ecs:  ECs3398 ECs5361
  Ype:  YPO2898
  Sty:  STM2545 STM4600
  Vch:  VC0746
  Pae:  PA3817
  Hin:  HI0380
  Pmu:  PM0316
  Xfa:  XF2475
  Nme:  NMB1348
  NmA:  NMA1560
  Rso:  RSc1161
  Atu:  AGc3426
  Sme:  SMc00482
  Bme:  BMEI0794
  Mlo:  mlr0038
  Ccr:  CC2520
  Rco:  RC0160
_______

[J] COG0566 rRNA methylases
  Afu:  AF2399
  Sce:  YDL112w_2 YOR201c_2
  Spo:  SPBC1347.13c
  Aae:  aq_1661 aq_1890
  Tma:  TM1741
  Fnu:  FN0875 FN1519
  Dra:  DR0748 DR1017 DR2211
  Cac:  CAC2358 CAC3154
  Cgl:  Cgl0802 Cgl1355 Cgl2588 Cgl2714
  Mtu:  Rv0380c Rv0881 Rv1644 Rv3579c
  MtC:  MT0393 MT0904 MT1682 MT3685
  Mle:  ML0324 ML1397 ML2485
  Lla:  L0330 L196779
  Spy:  SPy0356 SPy1938
  Spn:  SP1457 SP1973
  Sau:  SA0490 SA0984
  Lin:  lin0273 lin1181
  Bsu:  BS_yacO BS_ysgA
  Bha:  BH0113 BH3112
  Syn:  slr0955 slr1673
  Nos:  alr0175 alr1159
  Eco:  spoU yfiF yjfH
  EcZ:  ZspoU ZyfiF ZyjfH
  Ecs:  ECs3447 ECs4526 ECs5156
  Ype:  YPO0037 YPO0381 YPO3269
  Sty:  STM2648 STM3743 STM4369
  Vch:  VC0803 VC2598
  Pae:  PA4936
  Hin:  HI0424 HI0860
  Pmu:  PM1857 PM1953
  Xfa:  XF1985
  Nme:  NMB0931 NMB1141 NMB1179
  NmA:  NMA1127 NMA1351
  Rso:  RSc1229 RSc1419
  Hpy:  HP0553
  jHp:  jhp0500
  Cje:  Cj0153c
  Atu:  AGc3623 AGc4428 AGc593
  Sme:  SMc00649 SMc01130 SMc01327
  Bme:  BMEI0429 BMEI0741 BMEI1798
  Mlo:  mll0255 mlr2808 mlr3210
  Ccr:  CC1187 CC1239 CC2314
  Rpr:  RP664
  Rco:  RC1009
  Ctr:  CT403
  Cpn:  CPn0530
  Tpa:  TP0054 TP0109
  Bbu:  BB0052 BB0516
  Uur:  UU124 UU327
  Mpu:  MYPU_1780 MYPU_3040
  Mpn:  MPN355
  Mge:  MG252
_______

[C] COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes
  Sce:  YIL125w
  Spo:  SPBC3H7.03c
  Dra:  DR0287
  Cgl:  Cgl1105_1 Cgl1105_3
  Mtu:  Rv1248c_1 Rv1248c_3
  MtC:  MT1286_1 MT1286_3
  Mle:  ML1095_1 ML1095_3
  Sau:  SA1245
  Bsu:  BS_odhA
  Bha:  BH2206
  Eco:  sucA
  EcZ:  ZsucA
  Ecs:  ECs0751
  Ype:  YPO1113
  Sty:  STM0736
  Buc:  BU302
  Vch:  VC2087
  Pae:  PA1585
  Hin:  HI1662
  Pmu:  PM0277
  Xfa:  XF1550
  Nme:  NMB0955
  NmA:  NMA1149
  Rso:  RSc1269 RSp1364
  Atu:  AGc4776
  Sme:  SMc02482
  Bme:  BMEI0140
  Mlo:  mll4301
  Ccr:  CC0339
  Rpr:  RP180
  Rco:  RC0227
  Ctr:  CT054
  Cpn:  CPn0378
_______

[K] COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
  Aae:  aq_1452 aq_1490
  Tma:  TM1451
  Fnu:  FN1317 FN1318
  Dra:  DR0916 DR2482
  Cac:  CAC1300 CAC2052
  Cgl:  Cgl1865 Cgl1873
  Mtu:  Rv2703 Rv2710
  MtC:  MT2777 MT2783
  Mle:  ML1014 ML1022
  Lla:  L0139
  Spy:  SPy0782
  Spn:  SP1073
  Sau:  SA1390
  Lin:  lin1491
  Bsu:  BS_sigA
  Bha:  BH1376
  Syn:  sll0184 sll0306 sll1689 sll2012 slr0653
  Nos:  all1692 all5263 all7179 all7608 all7615 alr3800 alr3810
        alr4249
  Eco:  rpoD rpoH rpoS
  EcZ:  ZrpoD ZrpoH ZrpoS
  Ecs:  ECs3595 ECs3950 ECs4310
  Ype:  YPO0643 YPO3355 YPO3811
  Sty:  STM2924 STM3211 STM3568
  Buc:  BU025 BU055
  Vch:  VC0150 VC0517 VC0534
  Pae:  PA0376 PA0576 PA3622
  Hin:  HI0269 HI0533
  Pmu:  PM1241 PM1584
  Xfa:  XF1350 XF2691
  Nme:  NMB0712 NMB1538
  NmA:  NMA0917 NMA1737
  Rso:  RSc0374 RSc1207 RSc2215
  Hpy:  HP0088
  jHp:  jhp0081
  Cje:  Cj1001
  Atu:  AGc3929 AGc4439
  Sme:  SMc00646 SMc01563 SMc03873
  Bme:  BMEI0280 BMEI0378 BMEI0532
  Mlo:  mll2466 mlr3741 mlr3862
  Ccr:  CC3047 CC3098
  Rpr:  RP303 RP858
  Rco:  RC0407 RC1329
  Ctr:  CT615
  Cpn:  CPn0756
  Tpa:  TP0493 TP1012
  Bbu:  BB0712 BB0771
  Uur:  UU349
  Mpu:  MYPU_4540
  Mpn:  MPN352
  Mge:  MG249
_______

[P] COG0569 K+ transport systems, NAD-binding component
  Afu:  AF0838
  Hbs:  VNG0175G VNG1282G VNG1285G_2 VNG1924G VNG2068C_2 VNG6175G VNG6218G
        VNG6223C VNG6247G
  Mac:  MA1480 MA1482 MA2210 MA3020_2
  Mth:  MTH1265
  Mja:  MJ1105
  Mka:  MK1011
  Pho:  PH1984
  Pab:  PAB1178
  Pya:  PAE2421
  Ape:  APE2456m
  Aae:  aq_1503
  Tma:  TM1088
  Fnu:  FN0242 FN1724
  Dra:  DR1666
  Mtu:  Rv2691 Rv2692
  MtC:  MT2765 MT2766
  Spy:  SPy0326
  Spn:  SP0079 SP0480
  Sau:  SA0868_2 SA0939
  Lin:  lin1022
  Bsu:  BS_yjbQ_2 BS_ykqB BS_yuaA
  Bha:  BH0467 BH0597 BH2663
  Syn:  sll0493 sll0556_2 slr0773
  Nos:  all1800 alr0252_2 alr2111
  Eco:  trkA
  EcZ:  ZtrkA
  Ecs:  ECs4155
  Ype:  YPO0239
  Sty:  STM3409
  Vch:  VC0043
  Pae:  PA0016
  Hin:  HI0625
  Pmu:  PM1563
  Nme:  NMB1614
  NmA:  NMA1813
  Cje:  Cj1284
  Atu:  AGc2670
  Sme:  SMc01046
  Bme:  BMEI0869
  Tpa:  TP0024 TP0139 TP0513
  Bbu:  BB0725
  Mpu:  MYPU_1370
  Mpn:  MPN461
  Mge:  MG323
_______

[K] COG0571 dsRNA-specific ribonuclease
  Sce:  YMR024w YMR239c_2
  Spo:  SPBC119.11c SPBC3B9.14c SPCC188.13c
  Aae:  aq_946
  Tma:  TM1102
  Fnu:  FN0152
  Dra:  DR2281
  Cac:  CAC1748
  Cgl:  Cgl2022
  Mtu:  Rv2925c
  MtC:  MT2995
  Mle:  ML1659
  Lla:  L0326
  Spy:  SPy0531
  Spn:  SP1248
  Sau:  SA1076
  Lin:  lin1919
  Bsu:  BS_rncS
  Bha:  BH2489
  Syn:  slr0346 slr1646
  Nos:  all4107 alr0280
  Eco:  rnc
  EcZ:  Zrnc
  Ecs:  ECs3433
  Ype:  YPO2718
  Sty:  STM2581
  Buc:  BU258
  Vch:  VC2461
  Pae:  PA0770
  Hin:  HI0014
  Pmu:  PM0061
  Xfa:  XF2246
  Nme:  NMB0686
  NmA:  NMA0888
  Rso:  RSc1063
  Hpy:  HP0662
  jHp:  jhp0607
  Cje:  Cj1635c
  Atu:  AGc1906
  Sme:  SMc02652
  Bme:  BMEI1287
  Mlo:  mlr7765
  Ccr:  CC1560
  Rpr:  RP117
  Rco:  RC0157
  Ctr:  CT297
  Cpn:  CPn0054
  Tpa:  TP0809
  Bbu:  BB0705
  Uur:  UU205
  Mpu:  MYPU_1630
  Mpn:  MPN545
  Mge:  MG367
_______

[F] COG0572 Uridine kinase
  Hbs:  VNG1219G
  Sce:  YDR020c YNL129w YNR012w_1
  Spo:  SPBC16D10.10_1 SPBP22H7.06 SPCC162.11c_1
  Tma:  TM0751_2
  Dra:  DR0159
  Cac:  CAC0672_2
  Lla:  L108994
  Spy:  SPy1368
  Spn:  SP1208
  Sau:  SA1439
  Lin:  lin1532
  Bsu:  BS_udk
  Bha:  BH0320 BH1275
  Syn:  sll1525
  Nos:  alr2350 alr4123
  Eco:  udk
  EcZ:  Zudk
  Ecs:  ECs2873
  Ype:  YPO1524
  Sty:  STM2122
  Vch:  VC1038
  Hin:  HI0132
  Pmu:  PM0952
  Cpn:  CPn0735
  Tpa:  TP0667_2
  Bbu:  BB0015
  Uur:  UU332
  Mpn:  MPN561
  Mge:  MG382
_______

[P] COG0573 ABC-type phosphate transport system, permease component
  Afu:  AF1357
  Hbs:  VNG0455G VNG2484G
  Mac:  MA0888 MA3094
  Mth:  MTH1729
  Mja:  MJ1014
  Mka:  MK1688_1
  Pab:  PAB0698
  Pya:  PAE1396
  Sso:  SSO0490
  Ape:  APE0047
  Aae:  aq_2018
  Tma:  TM1263
  Dra:  DRA0158
  Cac:  CAC1706
  Cgl:  Cgl2520
  Mtu:  Rv0929 Rv0935
  MtC:  MT0956 MT0962
  Mle:  ML2094
  Lla:  L157144
  Spy:  SPy1244
  Spn:  SP1399 SP2085
  Sau:  SA1220
  Lin:  lin2641
  Bsu:  BS_yqgH
  Bha:  BH2993
  Syn:  sll0681 slr1248
  Nos:  all0910 all4574
  Eco:  pstC
  EcZ:  ZpstC
  Ecs:  ECs4663
  Ype:  YPO4116
  Sty:  STM3856
  Vch:  VCA0071
  Hin:  HI1382
  Pmu:  PM0435
  Xfa:  XF2142
  Rso:  RSc1530
  Cje:  Cj0614
  Atu:  AGc740_2
  Sme:  SMc02144
  Bme:  BMEI1988_2
  Mlo:  mll3722
  Ccr:  CC0290_2
  Bbu:  BB0216
  Uur:  UU199_1
  Mpn:  MPN610_1
  Mge:  MG411_1
_______

[G] COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
  Afu:  AF0710
  Hbs:  VNG0330G
  Mac:  MA0608 MA2458 MA2667 MA3408 MA3729
  Mth:  MTH1117 MTH1118 MTH460
  Mja:  MJ0542_1 MJ0542_3
  Mka:  MK0252
  Tac:  Ta0886
  Tvo:  TVN0976
  Pho:  PH0092
  Pab:  PAB0057
  Pya:  PAE2423 PAE3383
  Sso:  SSO0883 SSO2820
  Ape:  APE0026 APE0028 APE0650
  Aae:  aq_2142
  Tma:  TM0272
  Fnu:  FN0796
  Dra:  DR1727 DRC0002 DRC0003
  Cac:  CAC0534 CAC0797 CAC0801
  Cgl:  Cgl0537 Cgl0538
  Mtu:  Rv1127c Rv2047c_3
  MtC:  MT1159 MT2107_3
  Mle:  ML0955
  Spn:  SP0795
  Lin:  lin0432 lin1981
  Bsu:  BS_pps BS_yvkC
  Syn:  slr0301
  Nos:  all0635 all2509 alr3146 alr3147 alr3397
  Eco:  ppsA
  EcZ:  ZppsA
  Ecs:  ECs2409
  Ype:  YPO2409
  Sty:  STM1349
  Vch:  VCA0987
  Pae:  PA1770
  Xfa:  XF1259
  Nme:  NMB0618
  NmA:  NMA0826
  Rso:  RSc1421
  Hpy:  HP0121
  jHp:  jhp0111
  Cje:  Cj1418c
  Atu:  AGc1470
  Sme:  SMc00025
  Bme:  BMEI1436
  Mlo:  mlr7532
  Ccr:  CC1471
  Rpr:  RP492
  Rco:  RC0783
  Tpa:  TP0746
_______

[I] COG0575 CDP-diglyceride synthetase
  Afu:  AF1740
  Hbs:  VNG2119C
  Mac:  MA3306
  Mth:  MTH832
  Mja:  MJ1600
  Mka:  MK1073
  Tac:  Ta0107
  Tvo:  TVN0186
  Pho:  PH0343
  Pab:  PAB1285
  Pya:  PAE0660
  Sso:  SSO0776
  Ape:  APE0433
  Sce:  YBR029c
  Spo:  SPBC13A2.03
  Ecu:  ECU05g1250
  Aae:  aq_1249
  Tma:  TM1397
  Fnu:  FN1325
  Dra:  DR1509
  Cac:  CAC0796 CAC1792
  Cgl:  Cgl1975
  Mtu:  Rv2881c
  MtC:  MT2948
  Mle:  ML1589
  Lla:  L182799
  Spy:  SPy1964
  Spn:  SP0262
  Sau:  SA1104
  Lin:  lin1353
  Bsu:  BS_cdsA
  Bha:  BH2422
  Syn:  slr1369
  Nos:  all3875
  Eco:  cdsA
  EcZ:  ZcdsA
  Ecs:  ECs0177
  Ype:  YPO1050
  Sty:  STM0222
  Vch:  VC2255
  Pae:  PA3651
  Hin:  HI0919
  Pmu:  PM1990
  Xfa:  XF1049
  Nme:  NMB0185
  NmA:  NMA0082
  Rso:  RSc1409
  Hpy:  HP0215
  jHp:  jhp0201
  Cje:  Cj1347c
  Atu:  AGc2551
  Sme:  SMc02096
  Bme:  BMEI0828
  Mlo:  mll0639
  Ccr:  CC1918
  Rpr:  RP424
  Rco:  RC0589
  Ctr:  CT451
  Cpn:  CPn0567
  Tpa:  TP0602
  Bbu:  BB0119
  Uur:  UU511
  Mpu:  MYPU_4740
  Mpn:  MPN637
  Mge:  MG437
_______

[O] COG0576 Molecular chaperone GrpE (heat shock protein)
  Hbs:  VNG0494G
  Mac:  MA1477
  Mth:  MTH1289
  Tac:  Ta1086
  Tvo:  TVN0489
  Sce:  YOR232w
  Spo:  SPBC3B9.19
  Aae:  aq_433
  Tma:  TM0850
  Fnu:  FN0114
  Dra:  DR0128
  Cac:  CAC0471 CAC1281
  Cgl:  Cgl2739
  Mtu:  Rv0351
  MtC:  MT0366
  Mle:  ML2495
  Lla:  L0273
  Spy:  SPy1761
  Spn:  SP0516
  Sau:  SA1410
  Lin:  lin1511
  Bsu:  BS_grpE
  Bha:  BH1345
  Syn:  sll0057
  Nos:  all4473 alr2445
  Eco:  grpE
  EcZ:  ZgrpE
  Ecs:  ECs3476
  Ype:  YPO1107
  Sty:  STM2681
  Buc:  BU184 BU252
  Vch:  VC0854
  Pae:  PA4762
  Hin:  HI0071
  Pmu:  PM0334
  Xfa:  XF2341
  Nme:  NMB0561
  NmA:  NMA0744
  Rso:  RSc2639
  Hpy:  HP0110
  jHp:  jhp0102
  Cje:  Cj0758
  Atu:  AGc573
  Sme:  SMc01142
  Bme:  BMEI1777
  Mlo:  mll3220
  Ccr:  CC0154
  Rpr:  RP629
  Rco:  RC0977
  Ctr:  CT395
  Cpn:  CPn0502
  Tpa:  TP0215
  Bbu:  BB0519
  Uur:  UU406
  Mpu:  MYPU_1430_2
  Mpn:  MPN120
  Mge:  MG201
_______

[V] COG0577 ABC-type antimicrobial peptide transport system, permease component
  Afu:  AF1017 AF1470 AF1820_1 AF1820_2
  Hbs:  VNG0003C VNG0800H
  Mac:  MA0374 MA0447 MA1118 MA1744 MA2272 MA2550 MA2839
        MA3173 MA3583 MA3959 MA3963
  Mth:  MTH695
  Mja:  MJ0797 MJ1507
  Mka:  MK1655
  Pya:  PAE0039 PAE2288 PAE3663 PAE3684
  Sso:  SSO0686 SSO1080 SSO1810
  Tma:  TM0351 TM0706
  Fnu:  FN0828 FN1349 FN1353 FN1354
  Dra:  DR0474 DRA0279 DRB0050
  Cac:  CAC0067 CAC0068 CAC0165 CAC0227 CAC0320 CAC0374 CAC0454
        CAC0527 CAC0668 CAC0823 CAC1519 CAC1534 CAC2003 CAC2255
        CAC2731 CAC3561 CAC3583 CAC3584 CAC3614 CAC3615
  Cgl:  Cgl0401 Cgl0615 Cgl1965 Cgl2500 Cgl2937
  Mtu:  Rv0072 Rv0987 Rv2563
  MtC:  MT0078 MT1015 MT2639
  Lla:  L111162 L119891_2 L130944 L190126 L52704 L92987
  Spy:  SPy0772 SPy0838 SPy1255 SPy1911 SPy2029
  Spn:  SP0599 SP0601 SP0787 SP0913 SP1652 SP2013
  Sau:  SA0193 SA0296 SA0617 SA2150 SA2415 SA2493
  Lin:  lin0234 lin0419 lin1187 lin1541 lin1857 lin2220 lin2470
        lin2726
  Bsu:  BS_yclI BS_yknZ BS_ytrF BS_ytsD BS_yvcS BS_yvrM BS_yvrN
        BS_yxdM
  Bha:  BH0274 BH0276 BH0287 BH0752 BH2697 BH2698 BH3121
        BH3674 BH3914
  Syn:  sll1482 slr0594
  Nos:  all0808 all2651 all5346 alr0446 alr0452 alr1506 alr3648
        alr3711 alr4281 alr4974
  Eco:  ybjZ_2
  EcZ:  ZybjZ_2
  Ecs:  ECs0965_2
  Ype:  YPO1365_2 YPO1944 YPO1945 YPO3000_2
  Sty:  STM0942_2
  Vch:  VC1566 VC1567 VC1629 VC2554
  Pae:  PA0072 PA2390_2 PA4065 PA4593
  Pmu:  PM0449 PM0450 PM0996_2 PM1824
  Nme:  NMB0549_2
  NmA:  NMA0729_2
  Rso:  RSp1465
  Cje:  Cj0607_2 Cj1661 Cj1662
  Atu:  AGc3336 AGpA194 AGpA247_2 AGpA665 AGpAbx7
  Sme:  SMa1122 SMc04351_2
  Bme:  BMEI0360_2 BMEI0361
  Mlo:  mlr1397
  Ccr:  CC2090
  Ctr:  CT151
  Cpn:  CPn0249
  Tpa:  TP0962 TP0963
_______

[C] COG0578 Glycerol-3-phosphate dehydrogenase
  Hbs:  VNG1070Gm VNG1969G
  Tac:  Ta0633
  Tvo:  TVN0840
  Sso:  SSO2526
  Sce:  YIL155c
  Spo:  SPCC1223.03c
  Ecu:  ECU10g0870
  Dra:  DR1019
  Cgl:  Cgl1608
  Mtu:  Rv2249c Rv3302c
  MtC:  MT2309 MT3401
  Mle:  ML0713
  Lla:  L0013
  Spy:  SPy1683
  Spn:  SP2185
  Sau:  SA1142
  Lin:  lin1331
  Bsu:  BS_glpD
  Bha:  BH1095
  Syn:  sll1085
  Eco:  glpA glpD
  EcZ:  ZglpA ZglpD
  Ecs:  ECs3126 ECs4269
  Ype:  YPO3826 YPO3937
  Sty:  STM2284 STM3526
  Vch:  VCA0657 VCA0747
  Pae:  PA3025 PA3584 PA4991
  Hin:  HI0685
  Pmu:  PM1442
  Xfa:  XF2266
  Rso:  RSc3045
  Atu:  AGl1902 AGl1938 AGl2503
  Sme:  SMb20499 SMc01620 SMc02520
  Bme:  BMEI1749 BMEII0429
  Mlo:  mll0710 mlr7270
  Bbu:  BB0243
_______

[R] COG0579 Predicted dehydrogenase
  Afu:  AF1328
  Tac:  Ta1123
  Pab:  PAB0183
  Ape:  APE0309
  Tma:  TM1432
  Fnu:  FN0183
  Cac:  CAC0012 CAC1322
  Cgl:  Cgl1955
  Mtu:  Rv2852c
  MtC:  MT2918
  Sau:  SA2155 SA2400
  Bha:  BH3960
  Syn:  sll1495
  Nos:  alr2826
  Eco:  ygaF yojH
  EcZ:  ZygaF ZyojH
  Ecs:  ECs3099 ECs3521
  Sty:  STM2790
  Vch:  VCA0147
  Pae:  PA1489 PA3452 PA4640 PA5145
  Xfa:  XF0942
  Nme:  NMB2096
  NmA:  NMA0333
  Rso:  RSp0814
  Hpy:  HP0086
  jHp:  jhp0079
  Cje:  Cj0393c
  Atu:  AGc1485 AGc4955
  Sme:  SMb20101
  Bme:  BMEII0291
  Mlo:  mll4765
  Ccr:  CC3174
  Mpu:  MYPU_2640
  Mpn:  MPN051
  Mge:  MG039
_______

[G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
  Afu:  AF1426
  Mth:  MTH103
  Sso:  SSO1601
  Sce:  YFL054c_2 YLL043w_2 YLL052c YLL053c YPR192w
  Spo:  SPAC977.17_2
  Ecu:  ECU07g0740
  Tma:  TM1429
  Fnu:  FN1838
  Dra:  DR1929
  Cac:  CAC0770 CAC1319
  Lla:  L0015 L117074 L47650 L67370
  Spy:  SPy1682 SPy1854
  Spn:  SP1491 SP1778 SP2184
  Sau:  SA1140
  Lin:  lin1131 lin1574
  Bsu:  BS_glpF
  Bha:  BH1092
  Syn:  slr2057
  Eco:  aqpZ glpF
  EcZ:  ZaqpZ ZglpF
  Ecs:  ECs0961 ECs4852
  Ype:  YPO0091
  Sty:  STM2037 STM4087
  Buc:  BU306
  Pae:  PA3581 PA4034
  Hin:  HI0690 HI1017
  Pmu:  PM1445
  Xfa:  XF2267
  Rso:  RSp1127
  Atu:  AGc841 AGpA521
  Sme:  SMa0627 SMc01870 SMc02648
  Bme:  BMEI0070
  Mlo:  mll2168 mll6943
  Ccr:  CC1504
  Bbu:  BB0240
  Mpu:  MYPU_2220
  Mpn:  MPN043
  Mge:  MG033
_______

[P] COG0581 ABC-type phosphate transport system, permease component
  Afu:  AF1358
  Hbs:  VNG0453G_2 VNG2483G
  Mac:  MA0889 MA3095
  Mth:  MTH1730
  Mja:  MJ1013
  Mka:  MK1688_2
  Pab:  PAB0699
  Pya:  PAE1395
  Sso:  SSO0491
  Ape:  APE0048
  Aae:  aq_2019
  Tma:  TM1262
  Dra:  DRA0159
  Cac:  CAC1707
  Cgl:  Cgl2519
  Mtu:  Rv0930 Rv0936
  MtC:  MT0957 MT0963
  Mle:  ML2093
  Lla:  L156251
  Spy:  SPy1243
  Spn:  SP1398 SP2086
  Sau:  SA1219
  Lin:  lin2640
  Bsu:  BS_yqgI
  Bha:  BH2992
  Syn:  sll0682 slr1249
  Nos:  all0909 all4573
  Eco:  pstA
  EcZ:  ZpstA
  Ecs:  ECs4662
  Ype:  YPO2834_2 YPO4115
  Sty:  STM3855
  Vch:  VC0725_2 VCA0072
  Pae:  PA5367_2
  Hin:  HI1381
  Pmu:  PM0434
  Xfa:  XF2143
  Rso:  RSc1531
  Cje:  Cj0615
  Atu:  AGc741
  Sme:  SMc02143
  Bme:  BMEI1987
  Mlo:  mll3720
  Ccr:  CC0291
  Bbu:  BB0217
  Uur:  UU199_2
  Mpn:  MPN610_2
  Mge:  MG411_2
_______

[L] COG0582 Integrase
  Afu:  AF0082
  Hbs:  VNG0209H VNG0838G VNG0989C VNG6076H VNG6112H VNG6450H VNG7056
        VNG7080 VNG7153
  Mac:  MA1555 MA1692 MA1828 MA2026 MA2224 MA2231 MA2582
        MA2599 MA2792 MA2811 MA3794 MA4124 MA4127
  Mth:  MTH893
  Mja:  MJ0367 MJ0770
  Tac:  Ta0365 Ta1314
  Tvo:  TVN0136 TVN0137_1 TVN0263 TVN0678 TVN0680 TVN0723 TVN0726
        TVN0874 TVN1485 TVN1489
  Pho:  PH1826
  Pab:  PAB0255
  Sso:  SSO0375
  Ape:  APE0805
  Aae:  aq_1137 aq_aa09
  Tma:  TM0967
  Fnu:  FN0269 FN0402 FN0837
  Dra:  DR0513 DRA0155 DRB0104 DRC0018
  Cac:  CAC1110 CAC1111 CAC1170 CAC1310 CAC1595 CAC2813 CAP0080
  Cgl:  Cgl1303 Cgl1516 Cgl1833 Cgl1845 Cgl1981
  Mtu:  Rv1054 Rv1055 Rv2309c Rv2646 Rv2659c Rv2894c Rv3751
  MtC:  MT1084 MT2368 MT2724 MT2735 MT2962
  Mle:  ML1600
  Lla:  L102735 L109747 L34517 L36404 L47248 L48477 L55605
        L57903 L7798
  Spy:  SPy0365 SPy0937 SPy1196 SPy1488 SPy2122
  Spn:  SP0506 SP0890 SP1129 SP1159 SP1791 SP1877
  Sau:  SA0051 SA0052 SA0356 SA0577 SA0762 SA0763 SA1483
        SA1484 SA1810 SA1835 SA1954 SA1955 SA2387 SA2388
  Lin:  lin0071 lin0524 lin1254 lin1743 lin1765 lin2409 lin2601
        lin2610 pli0062
  Bsu:  BS_ydcL BS_yoeC BS_yomM BS_yopP
  Bha:  BH2349 BH2364 BH3465 BH3551 BH4039
  Syn:  slr0733
  Nos:  all3107 all3503 all8545 all9019 alr0677 alr1442 alr3224
        alr4992_2 alr7076 alr7203 alr7511 alr8001 asl0678
  Eco:  fimB fimE intA intB intC intD intE
        intF intG intQ intR intZ
  EcZ:  Z0324 Z0394 Z0395 Z0946 Z1120 Z1323 Z1559
        Z1835 Z1866 Z2084 Z2566 Z2568 Z3024 Z3943
        Z3945 Z4313 Z5878_2 Z5890 Z6022 ZfimB ZfimE
        ZintC ZintH ZintL ZintN ZintO ZintR ZintT
        ZintU ZintV ZintW
  Ecs:  ECs0271 ECs0289 ECs0354 ECs0355 ECs1055 ECs1160 ECs1299
        ECs1501 ECs1574 ECs1609 ECs1757 ECs1813 ECs1929 ECs2217
        ECs2617 ECs2675 ECs2773 ECs3013 ECs3231 ECs3511 ECs3512
        ECs3843 ECs4534 ECs5242_2 ECs5253 ECs5271 ECs5272
  Ype:  YPMT1.85 YPO0887 YPO0961 YPO1086a YPO1092 YPO1098 YPO1868
        YPO1917 YPO2639 YPO2641 YPO2819 YPO3438 YPO4033
  Sty:  PSLT031 STM0554 STM0716 STM0893 STM1005 STM1861 STM1871
        STM2006 STM2636 STM2739 STM2740 STM2760 STM2763 STM4488
  Vch:  VC0516 VC0847 VC1758 VCA0281 VCA0291 VCA0790_2 VCA0878
  Pae:  PA0728
  Hin:  HI1424 HI1572
  Pmu:  PM1769 PM1948 PM1949
  Xfa:  XF0480 XF0631 XF0678 XF0968 XF0969 XF1555 XF1556
        XF1642 XF1718_1 XF1789 XF2131 XF2132 XF2288 XF2309
        XF2478 XF2530 XF2761
  Nme:  NMB1001
  NmA:  NMA1221
  Rso:  RSc0968 RSc1494 RSc1554 RSc1655 RSc1846 RSc1847 RSc1871
        RSc1896 RSc2489 RSc2622 RSp0902 RSp0921 RSp0922 RSp1102
  Hpy:  HP0675 HP0995 HP1009
  jHp:  jhp0617 jhp0941 jhp0951
  Cje:  Cj0863c
  Atu:  AGc4764 AGc767 AGl109 AGl2007 AGpA22
  Sme:  SMa1617 SMa1619 SMa1620 SMa1874 SMa2175 SMa2187 SMa2189
        SMa2257 SMa2285 SMc02187 SMc02297 SMc02397 SMc02489 SMc03246
        SMc03247
  Bme:  BMEI0147 BMEI0537 BMEI1012 BMEI1307 BMEI1664 BMEI1702
  Mlo:  mll0487 mll4043 mll5763 mll5956 mll5957 mll5958 mll6039
        mll6040 mll6042 mll6043 mll6044 mll6045 mll6228 mll6229
        mll6230 mll6374 mll6431 mll6432 mll7973 mll8495 mll9328
        mll9329 mll9330 mll9331 mll9356 mlr0475 mlr0958 mlr4290
        mlr5460 mlr5973_2 mlr6952 mlr7741 mlr9321 mlr9323 mlr9324
        mlr9537 mlr9649 msl6419 msr5974
  Ccr:  CC0344 CC1766 CC2681
  Rpr:  RP817
  Rco:  RC1268
  Ctr:  CT347 CT864
  Cpn:  CPn0024 CPn1024
  Uur:  UU145 UU222 UU529
  Mpu:  MYPU_5310
_______

[K] COG0583 Transcriptional regulator
  Afu:  AF2127
  Mth:  MTH1545
  Mja:  MJ0300 MJ1120
  Mka:  MK0574 MK1482
  Aae:  aq_1038 aq_638
  Fnu:  FN0503 FN0603
  Dra:  DR0615 DRA0336
  Cac:  CAC0023 CAC0093 CAC0745 CAC0768 CAC1046 CAC1481 CAC1588
        CAC2394 CAC2690 CAC3349 CAC3360 CAC3361 CAC3409 CAC3466
  Cgl:  Cgl0015 Cgl0222 Cgl0415 Cgl0449 Cgl0590 Cgl0973 Cgl1234
        Cgl1879 Cgl2017 Cgl2565 Cgl2863
  Mtu:  Rv0117 Rv0377 Rv1985c Rv2282c
  MtC:  MT0125.1 MT0391 MT2039 MT2340
  Mle:  ML2041 ML2663
  Lla:  L0148 L0214 L0215 L0216 L0217 L0219 L0220
  Spy:  SPy0824 SPy0898 SPy1634
  Spn:  SP0676 SP0927
  Sau:  SA0429 SA0627 SA0836 SA2123 SA2330
  Lin:  lin0322 lin0450 lin0491 lin1009 lin1846 lin2250 lin2335
        lin2446
  Bsu:  BS_alsR BS_citR BS_gltC BS_gltR BS_ycgK BS_yclA BS_ykuM
        BS_yoaU BS_yofA BS_yraN BS_yrdQ BS_ytlI BS_yusT BS_yvbU
        BS_ywbI BS_ywfK BS_ywqM BS_yxjO BS_yybE
  Bha:  BH0839 BH1787 BH2094 BH2102 BH2117 BH2712 BH3925
  Syn:  sll0030 sll0998 sll1594 slr0395 slr1245 slr1871
  Nos:  all0602 all0862 all3953 all4986 all8086 alr0353 alr4099
        asl8072
  Eco:  cbl cynR cysB dsdC gcvA hcaR iciA
        ilvY leuO lrhA lysR metR nac nhaR
        oxyR perR tdcA xapR yafC yagP yahB
        ybbS ybdO ybeF ybhD ycaN ycjZ ydaK
        ydcI ydhB yeaT yeeY yeiE yfaH yfeR
        yfiE ygfI ygiP yhaJ yhcS yhjC yiaU
        yidZ yifD+A yjiE yneJ ynfL yqfE
  EcZ:  Z0342 Z0346 Z0371 Z0405 Z0885 Z2299 Z3395
        Z3495 Z4258 Zcbl ZcynR ZcysB ZgcvA ZhcaR
        ZiciA ZilvY ZleuO ZlrhA ZlysR ZmetR Znac
        ZnhaR ZoxyR ZtdcA ZyafC ZybbS ZybdO ZybeF
        ZybhD ZycjZ ZydaK ZydhB ZyeaT ZyeeY ZyeiE
        ZyfeRm ZyfiE ZygiP ZyhaJ ZyhcS ZyhjC ZyiaU
        ZyidZ ZyifAm ZyjiE ZyneJ ZynfL
  Ecs:  ECs0018 ECs0080 ECs0204 ECs0305 ECs0309 ECs0333 ECs0365
        ECs0391 ECs0565 ECs0642 ECs0667 ECs0755 ECs0796 ECs1847
        ECs1910 ECs1923 ECs2027 ECs2133 ECs2301 ECs2368 ECs2508
        ECs2783 ECs2784 ECs2817 ECs3032 ECs3049 ECs3122 ECs3173
        ECs3280 ECs3281 ECs3403 ECs3443 ECs3668 ECs3696 ECs3786
        ECs3792 ECs3943 ECs3987 ECs3998 ECs4116 ECs4401 ECs4461
        ECs4648 ECs4698 ECs4707 ECs4758 ECs4890
  Ype:  YPO0084 YPO0276 YPO0471 YPO0535 YPO0631 YPO0669 YPO0797
        YPO0799 YPO0916 YPO1029 YPO1169 YPO1308 YPO1503 YPO1929
        YPO1934 YPO2150 YPO2169 YPO2219 YPO2388 YPO2458 YPO2497
        YPO2556 YPO2807 YPO2979 YPO3228 YPO3545 YPO3682 YPO3683
        YPO3789 YPO3889 YPO3904 YPO3915
  Sty:  PSLT041 STM0014 STM0030 STM0040 STM0115 STM0256 STM0304
        STM0333 STM0514 STM0606 STM0634 STM0692 STM0763 STM0764
        STM0859 STM0952 STM1429 STM1487 STM1523 STM1625 STM1677
        STM1713 STM2069 STM2180 STM2201 STM2281 STM2330 STM2420
        STM2424 STM2575 STM2644 STM2912 STM2982 STM3014 STM3020
        STM3064 STM3121 STM3235 STM3245 STM3367 STM3607 STM3736
        STM3800 STM3834 STM3848 STM3897 STM3908 STM3964 STM4125
        STM4270 STM4511
  Vch:  VC0068 VC0161 VC0474 VC0482 VC0677 VC0732 VC0781
        VC0787 VC0896 VC1049 VC1390 VC1561 VC1580 VC1588
        VC1617 VC1706 VC1907 VC1947 VC1955 VC2103 VC2324
        VC2383 VC2485 VC2636 VC2760 VCA0082 VCA0542 VCA0575
        VCA0635 VCA0756 VCA0830 VCA0833 VCA0876 VCA0889 VCA0964
        VCA0982 VCA0991 VCA1020 VCA1055 VCA1058
  Pae:  PA0032 PA0037 PA0056 PA0123 PA0133 PA0152 PA0159
        PA0181 PA0191 PA0207 PA0217 PA0218 PA0233 PA0272
        PA0289 PA0448 PA0477 PA0479 PA0491 PA0528 PA0701
        PA0708 PA0739 PA0784 PA0815 PA0816 PA0876 PA0877
        PA1003 PA1067 PA1128 PA1138 PA1141 PA1145 PA1184
        PA1201 PA1223 PA1264 PA1309 PA1312 PA1328 PA1399
        PA1413 PA1422 PA1570 PA1738 PA1754 PA1826 PA1853
        PA1859 PA1961 PA1998 PA2054 PA2056 PA2076 PA2115
        PA2121 PA2123 PA2206 PA2220 PA2258 PA2267 PA2316
        PA2334 PA2383 PA2417 PA2432 PA2447 PA2469 PA2492
        PA2497 PA2510 PA2534 PA2547 PA2551 PA2601 PA2681
        PA2758 PA2834 PA2838 PA2846 PA2848 PA2877 PA2879
        PA2921 PA2930 PA3122 PA3124 PA3135 PA3225 PA3321
        PA3398 PA3433 PA3565 PA3587 PA3594 PA3630 PA3711
        PA3776 PA3778 PA3845 PA3895 PA3995 PA4109 PA4145
        PA4174 PA4203 PA4363 PA4902 PA4914 PA4989 PA5029
        PA5085 PA5179 PA5189 PA5218 PA5293 PA5344 PA5382
        PA5428 PA5437
  Hin:  HI0571 HI0681 HI0775 HI1194m HI1200 HI1364 HI1739
  Pmu:  PM0403 PM0421 PM0567 PM0660 PM1283 PM1346 PM1945
  Xfa:  XF0833 XF1132 XF1532 XF1719 XF1721 XF1722 XF1730
        XF1752 XF1768
  Nme:  NMB0173 NMB0290 NMB0381 NMB1049 NMB1856 NMB2055
  NmA:  NMA0098 NMA0381 NMA0601 NMA1437 NMA2106 NMA2197
  Rso:  RSc0065 RSc0144 RSc0160 RSc0205 RSc0214 RSc0243 RSc0325
        RSc0479 RSc0542 RSc0615 RSc0634 RSc0804 RSc1092 RSc1094
        RSc1110 RSc1152 RSc1196 RSc1348 RSc1360 RSc1440 RSc1472
        RSc1729 RSc1880 RSc2018 RSc2094 RSc2209 RSc2243 RSc2327
        RSc2411 RSc2427 RSc2497 RSc2498 RSc2535 RSc2537 RSc2588
        RSc2600 RSc2665 RSc2690 RSc2708 RSc2748 RSc2761 RSc3280
        RSc3308 RSc3332 RSc3334 RSp0018 RSp0221 RSp0308 RSp0434
        RSp0447 RSp0535 RSp0662 RSp0677 RSp0692 RSp0823 RSp0887
        RSp0910 RSp0912 RSp0942 RSp0997 RSp1110 RSp1126 RSp1146
        RSp1235 RSp1237 RSp1257 RSp1267 RSp1326 RSp1357 RSp1450
        RSp1471 RSp1478 RSp1514 RSp1571 RSp1574 RSp1593
  Cje:  Cj1000
  Atu:  AGc1075 AGc1163 AGc1186 AGc1204 AGc1566 AGc1597 AGc1691
        AGc2231 AGc2527 AGc3243 AGc354 AGc3765 AGc3973 AGc3985
        AGc4208 AGc4269 AGc448 AGc4500 AGc4564 AGc4636 AGl1147
        AGl1152 AGl1169 AGl1183 AGl1195 AGl1406 AGl1464 AGl1663
        AGl1696 AGl1733 AGl1754 AGl1856_1 AGl1915 AGl2011 AGl2015
        AGl2048 AGl2774 AGl2884 AGl2935 AGl3226 AGl33 AGl3310
        AGl3463 AGl351 AGl412GM AGl471 AGl471GM AGl484 AGl567
        AGl649 AGl862 AGl895 AGl911 AGl999 AGpA125 AGpA256
        AGpA261 AGpA270 AGpA273 AGpA286 AGpA289 AGpA302 AGpA370
        AGpA436 AGpA467 AGpA469 AGpA566 AGpA611 AGpA629 AGpA814
        AGpAbx130 AGpT110 AGpT155 AGpT166 AGpT64 AGpT70
  Sme:  SMa0039 SMa0097 SMa0179 SMa0303 SMa0307 SMa0310 SMa0347
        SMa0353 SMa0355 SMa0372 SMa0498 SMa0557 SMa0750 SMa0757
        SMa0840 SMa0849 SMa0870 SMa0985 SMa1387 SMa1480 SMa1493
        SMa1602 SMa1625 SMa1632 SMa1720 SMa1736 SMa1782 SMa1828
        SMa1893 SMa1933 SMa1943 SMa1954 SMa1956 SMa1966 SMa1979
        SMa1987 SMa2014 SMa2015 SMa2027 SMa2107 SMa2287 SMa2293
        SMa2341 SMb20004 SMb20009 SMb20123 SMb20203 SMb20211 SMb20285
        SMb20494 SMb20580 SMb20582 SMb20683 SMb20715 SMb20847 SMb20870
        SMb20896 SMb21093 SMb21180 SMb21291 SMb21359 SMb21360 SMb21408
        SMb21434 SMb21535 SMc00037 SMc00275 SMc00283 SMc00370 SMc00504
        SMc00766 SMc00780 SMc00818 SMc00820 SMc00831 SMc00929 SMc01092
        SMc01225 SMc01330 SMc01570 SMc01651 SMc01664 SMc01817 SMc01968
        SMc02030 SMc02429 SMc02523 SMc02596 SMc02893 SMc02984 SMc03122
        SMc03186 SMc03975 SMc04055 SMc04163 SMc04223 SMc04315 SMc04882
  Bme:  BMEI0116 BMEI0218 BMEI0513 BMEI0686 BMEI0895 BMEI0896 BMEI1573
        BMEI1598 BMEI1885 BMEI1913 BMEII0345 BMEII0390 BMEII0493 BMEII0526
        BMEII0576 BMEII0639 BMEII0820 BMEII0894 BMEII0901 BMEII0902 BMEII1065
        BMEII1077 BMEII1135
  Mlo:  mll0129 mll0238 mll1141 mll1248 mll1582 mll1863 mll2048
        mll2171 mll2263 mll2420 mll2472 mll2505 mll2533 mll2551
        mll2784 mll3011 mll3515 mll3827 mll4082 mll4232 mll4435
        mll4894 mll4929 mll5050 mll5139 mll5277 mll5399 mll6179
        mll6783 mll6897 mll6935 mll6938 mll6971 mll7054 mll7205
        mll7397 mll7406 mll7443 mll7779 mll7923 mll7971 mll8274
        mll8279 mlr0244 mlr0603 mlr0648 mlr0919 mlr1441 mlr1832
        mlr1930 mlr1973 mlr1983 mlr1992 mlr2195 mlr2482 mlr2579
        mlr2751 mlr2880 mlr2977 mlr3082 mlr3418 mlr3528 mlr3557
        mlr3918 mlr3988 mlr4581 mlr5377 mlr5541 mlr5616 mlr5660
        mlr5687 mlr5771 mlr6097 mlr6182 mlr6958 mlr6981 mlr6990
        mlr7023 mlr7163 mlr7346 mlr7606 mlr7672 mlr7786 mlr7811
        mlr7815 mlr7826
  Ccr:  CC0790 CC1117 CC1474 CC1621 CC2143 CC2352 CC2517
        CC2564 CC3045 CC3510 CC3697
_______

[C] COG0584 Glycerophosphoryl diester phosphodiesterase
  Hbs:  VNG1846C
  Tac:  Ta0634
  Tvo:  TVN0841
  Pab:  PAB0180
  Pya:  PAE1058
  Ape:  APE0262
  Sce:  YPL110c_3 YPL206c
  Spo:  SPAC4D7.02c SPAPB1E7.05_3
  Ecu:  ECU01g1380
  Tma:  TM1621
  Fnu:  FN1891 FN1908 FN1954
  Dra:  DR0542 DR2084 DRB0111_2
  Cac:  CAC0430 CAP0015
  Cgl:  Cgl1354 Cgl2845
  Mtu:  Rv0317c Rv2277c Rv3842c
  MtC:  MT0332 MT2337 MT3950
  Mle:  ML0074
  Lla:  L1007 L18600_2 L58914_2
  Spy:  SPy0839_2
  Spn:  SP0994_2
  Sau:  SA0036 SA0220_2 SA0820 SA0969 SA1542
  Lin:  lin0625_2 lin1330
  Bsu:  BS_glpQ BS_yhdW BS_yqiK
  Bha:  BH1080 BH1776 BH3700
  Nos:  all0275_2 all1051
  Eco:  glpQ ugpQ
  EcZ:  ZglpQ ZugpQ
  Ecs:  ECs3124 ECs4295
  Ype:  YPO2028 YPO2035 YPO3232 YPO3792 YPO3827
  Sty:  STM2282 STM3553
  Vch:  VC1554 VCA0136
  Pae:  PA0347 PA2352 PA2990 PA4792
  Hin:  HI0689
  Pmu:  PM1444
  Rso:  RSc0502 RSc1268
  Atu:  AGc2533 AGl1291 AGl598 AGpA81 AGpT266
  Sme:  SMc02104 SMc02646 SMc03129
  Bme:  BMEI0819
  Mlo:  mlr0660 mlr8455 mlr9158
  Ccr:  CC2157 CC3172 CC3272
  Tpa:  TP0257
  Mpu:  MYPU_2630
  Mpn:  MPN420 MPN566
  Mge:  MG293 MG385
_______

[S] COG0585 Uncharacterized conserved protein
  Afu:  AF1677
  Hbs:  VNG0243Cm
  Mac:  MA3271
  Mth:  MTH1529
  Mja:  MJ0588 MJ1364
  Mka:  MK0676
  Tac:  Ta0214
  Tvo:  TVN1380
  Pho:  PH1538
  Pab:  PAB0430
  Pya:  PAE3134
  Sso:  SSO0174
  Ape:  APE1819
  Sce:  YOR243c
  Spo:  SPBC1A4.09
  Ecu:  ECU06g1230
  Aae:  aq_1723
  Dra:  DR1991
  Eco:  ygbO
  EcZ:  ZygbO
  Ecs:  ECs3599
  Ype:  YPO3359
  Sty:  STM2928
  Vch:  VC0530
  Pae:  PA3626
  Hin:  HI0701
  Pmu:  PM1610
  Hpy:  HP0926
  jHp:  jhp0860
  Cje:  Cj1457c
_______

[S] COG0586 Uncharacterized membrane-associated protein
  Tac:  Ta0578 Ta1273
  Tvo:  TVN0321 TVN0651
  Sso:  SSO2787
  Dra:  DR1167 DR2612 DRA0153
  Cac:  CAC2655
  Cgl:  Cgl0276 Cgl0826 Cgl2389
  Mtu:  Rv0364 Rv2637
  MtC:  MT0380 MT2715
  Mle:  ML0287 ML0467
  Lla:  L119032 L199206 L31711
  Sau:  SA2301
  Lin:  lin0035 lin1535 lin1984
  Bsu:  BS_ybfM BS_ykoX BS_yngC
  Bha:  BH2057 BH2202
  Syn:  slr0232 slr0509
  Nos:  all4799 all5093
  Eco:  dedA yabI yghB yohD yqjA
  EcZ:  ZdedA ZyabI ZyghB ZyohD ZyqjA
  Ecs:  ECs0069 ECs3023 ECs3201 ECs3893 ECs3977
  Ype:  YPO0519 YPO0574 YPO0680 YPO2767 YPO3783
  Sty:  STM0105 STM2170 STM2367 STM3162 STM3226
  Buc:  BU139
  Vch:  VCA0651
  Pae:  PA1209_1 PA4011_1 PA4029 PA5244
  Hin:  HI1629
  Pmu:  PM0640
  Xfa:  XF0277_1
  Nme:  NMB1052 NMB1689
  NmA:  NMA1250 NMA1948
  Rso:  RSc2559 RSp0396_1
  Hpy:  HP0571 HP1162
  jHp:  jhp0518 jhp1089
  Cje:  Cj0928 Cj1168c Cj1210
  Bme:  BMEI0670 BMEI1502
  Mlo:  mll0121 mlr0822 mlr5375
  Ccr:  CC1701
  Tpa:  TP0779
  Bbu:  BB0250
_______

[L] COG0587 DNA polymerase III, alpha subunit
  Aae:  aq_1008
  Tma:  TM0461
  Fnu:  FN1383
  Dra:  DR0507
  Cac:  CAC0516 CAC1223
  Cgl:  Cgl0620 Cgl2079
  Mtu:  Rv1547 Rv3370c
  MtC:  MT1598 MT3480
  Mle:  ML1207
  Lla:  L0307
  Spy:  SPy1284
  Spn:  SP0895
  Sau:  SA1525
  Lin:  lin1609
  Bsu:  BS_dnaE BS_yorL
  Bha:  BH3169
  Syn:  sll1572 slr0603
  Nos:  all3578 alr1054
  Eco:  dnaE
  EcZ:  ZdnaE
  Ecs:  ECs0186
  Ype:  YPO1059
  Sty:  STM0231
  Buc:  BU238
  Vch:  VC2245
  Pae:  PA0669 PA3640
  Hin:  HI0739
  Pmu:  PM0034
  Xfa:  XF0204
  Nme:  NMB1827
  NmA:  NMA0632
  Rso:  RSc2205 RSp0800
  Hpy:  HP1460
  jHp:  jhp1353
  Cje:  Cj0718
  Atu:  AGc2379 AGl3173 AGpAbx5 AGpT175
  Sme:  SMa0892 SMc01375 SMc03788
  Bme:  BMEI1137 BMEI1876
  Mlo:  mll0870 mlr4428
  Ccr:  CC1926 CC3211
  Rpr:  RP778
  Rco:  RC1211
  Ctr:  CT545
  Cpn:  CPn0666
  Tpa:  TP0669
  Bbu:  BB0579
  Uur:  UU415
  Mpu:  MYPU_7190
  Mpn:  MPN378
  Mge:  MG261
_______

[G] COG0588 Phosphoglycerate mutase 1
  Mac:  MA2400
  Sce:  YDL021w YKL152c YOL056w
  Spo:  SPAC26F1.06
  Fnu:  FN0729 FN0730
  Cac:  CAC2741
  Cgl:  Cgl0397
  Mtu:  Rv0489
  MtC:  MT0508
  Mle:  ML2441
  Lla:  L0011
  Spy:  SPy1429
  Spn:  SP1655
  Sau:  SA2204
  Lin:  lin2308
  Eco:  gpmA
  EcZ:  ZgpmA
  Ecs:  ECs0783
  Ype:  YPO1133
  Sty:  STM0772
  Buc:  BU304
  Hin:  HI0757
  Pmu:  PM1506
  Xfa:  XF1893
  Nme:  NMB1604
  NmA:  NMA1801
  Rso:  RSc0353
  Sme:  SMc02838
  Bme:  BMEII0248
  Mlo:  mlr4643
  Ccr:  CC2261
  Ctr:  CT722
  Cpn:  CPn0863
  Tpa:  TP0168
  Bbu:  BB0658
_______

[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins
  Afu:  AF0125 AF0349 AF0826 AF0987 AF1526 AF1612_2 AF1760
        AF1934
  Hbs:  VNG0174G_2 VNG0602C VNG0743H VNG1240G_2 VNG1518H VNG1536C VNG1658C
        VNG1752C VNG1898C VNG2386C VNG2520C VNG2521H VNG2523H VNG6179G
        VNG6205C
  Mac:  MA0162 MA1462 MA2512 MA2866 MA3284 MA3286 MA3944
        MA4094
  Mth:  MTH1065 MTH1154 MTH153 MTH898 MTH993
  Mja:  MJ0531 MJ0577
  Mka:  MK0142 MK0521 MK1051
  Tac:  Ta0588 Ta0876 Ta1307
  Tvo:  TVN0502 TVN0646 TVN0716
  Pho:  PH0823 PH1540 PH1914
  Pab:  PAB1108
  Pya:  PAE0685 PAE1738 PAE2384
  Sso:  SSO0529 SSO1865 SSO2778 SSO3183
  Ape:  APE0140
  Spo:  SPAC167.05 SPBC25B2.10
  Aae:  aq_1024 aq_855
  Dra:  DR2132 DR2363
  Cgl:  Cgl1336 Cgl1374 Cgl2793 Cgl2878 Cgl2933
  Mtu:  Rv1636 Rv1996 Rv2005c Rv2026c Rv2028c Rv2319c Rv2623
        Rv2624c Rv3134c
  MtC:  MT1672 MT2052 MT2061 MT2085 MT2087 MT2382 MT2698
        MT2699 MT3220
  Mle:  ML1390
  Lla:  L1010 L102093 L103195 L10754 L110467 L84477
  Spy:  SPy1780
  Spn:  SP1996
  Sau:  SA1528 SA1532
  Lin:  lin0515 lin1615 lin2820
  Bsu:  BS_nhaX BS_yxiE
  Bha:  BH0415 BH2844_2 BH3184
  Syn:  sll1388 sll1654 sll1864_3 slr0244 slr0415_2 slr0670 slr1101
        slr1230
  Nos:  all0634 all1122 all1590 all3567_2 all7588 alr0656_2 alr0750
        alr0882 alr1634 alr2264_2 alr4132 alr4891_3
  Eco:  uspA ybdQ ydaA yecG yiiT ynaF
  EcZ:  ZuspA ZybdQ ZydaA ZyecG ZyiiT ZynaF
  Ecs:  ECs0646 ECs1914 ECs1997 ECs2603 ECs4367 ECs4848
  Ype:  YPO2301 YPO3970
  Sty:  STM0614 STM1652 STM1661 STM1927 STM3591
  Vch:  VC0076 VC0428 VC1433 VCA0159
  Pae:  PA1753 PA1789 PA2833 PA3017 PA3309 PA4328 PA4352
        PA5027
  Hin:  HI0815 HI1426
  Pmu:  PM0474 PM0669 PM1286
  Nme:  NMB1500
  NmA:  NMA1703
  Rso:  RSc0179 RSc0184 RSc0185 RSc1359 RSc1504 RSp0318 RSp1159
        RSp1561
  Atu:  AGc1650 AGc3179 AGc613 AGc878
  Sme:  SMa1093 SMa1095 SMa1100 SMa1147 SMa1149 SMa1158 SMa1231
        SMc00048 SMc01120
  Bme:  BMEI0102 BMEI0938 BMEI1807 BMEII0245
  Mlo:  mll0142 mll5316 mlr2268_2 mlr5914 mlr6573 mlr6580_2 mlr6594
        mlr6608
  Ccr:  CC1452
  Rpr:  RP196
  Rco:  RC0258
_______

[FJ] COG0590 Cytosine/adenosine deaminases
  Mac:  MA2341 MA2559 MA3407
  Sce:  YJL035c YLR316c YPR062w
  Spo:  SPAP27G11.04c SPBC16D10.10_2 SPCC965.14c
  Ecu:  ECU09g0990 ECU09g1960
  Aae:  aq_903
  Dra:  DR0603_1 DR1207_2
  Cac:  CAC0123
  Cgl:  Cgl0229 Cgl0626
  Mtu:  Rv0828c Rv3114 Rv3752c
  MtC:  MT3196 MT3859
  Mle:  ML2474
  Lla:  L127182
  Spn:  SP0020
  Sau:  SA0516
  Lin:  lin2867
  Bsu:  BS_yaaJ BS_yknA
  Bha:  BH0033
  Syn:  sll0051 sll1631 slr1161
  Nos:  all3284 all4872 alr4634
  Eco:  yfhC
  EcZ:  ZyfhC
  Ecs:  ECs3425
  Ype:  YPO2923
  Sty:  STM2568
  Buc:  BU255
  Vch:  VC0864
  Pae:  PA2499 PA3767
  Hin:  HI0906
  Pmu:  PM0078
  Xfa:  XF1012
  Nme:  NMB0933_2
  NmA:  NMA1129
  Rso:  RSc1451
  Atu:  AGc1234 AGc2681
  Sme:  SMc00905 SMc01052
  Bme:  BMEII0619 BMEII1040
  Mlo:  mll2512 mll5129 mll8252
  Ccr:  CC0231
  Rpr:  RP831
  Rco:  RC1285
  Ctr:  CT844
  Cpn:  CPn1001
_______

[ER] COG0591 Na+/proline symporter
  Afu:  AF0015 AF0237 AF1205 AF1222
  Hbs:  VNG0908G VNG1785G
  Mac:  MA0003 MA0279 MA1316
  Mth:  MTH1856
  Tac:  Ta0300
  Tvo:  TVN0146 TVN1300
  Pho:  PH1044 PH1361
  Pab:  PAB0609 PAB1841 PAB2354
  Sso:  SSO2113 SSO2476
  Ape:  APE0972
  Sce:  YHL016c
  Spo:  SPAC869.03c SPBC23G7.13c
  Fnu:  FN0107 FN0877
  Cgl:  Cgl1137
  Spn:  SP1328
  Sau:  SA0303 SA1718
  Bsu:  BS_opuE BS_ycgO BS_yhjB BS_yodF
  Bha:  BH0660 BH2706
  Syn:  sll1087
  Eco:  putP
  EcZ:  ZputP
  Ecs:  ECs1261
  Ype:  YPO1853 YPO3002
  Sty:  STM1125 STM1128
  Vch:  VC0303_1 VCA0667 VCA1071
  Pae:  PA0287 PA0783 PA1418 PA3271_1 PA4725_1
  Hin:  HI1352
  Pmu:  PM0341 PM0588
  Nme:  NMB0402
  NmA:  NMA2083
  Rso:  RSc0463
  Hpy:  HP0055
  jHp:  jhp0047
  Cje:  Cj1502c
  Atu:  AGc932_1
  Sme:  SMc02249_1
  Bme:  BMEI1606_1
  Mlo:  mll5691_1
  Rpr:  RP465_1 RP571
  Rco:  RC0702 RC0862
  Cpn:  CPn0486
_______

[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)
  Afu:  AF0335
  Hbs:  VNG2256G
  Mac:  MA0110
  Mth:  MTH1312
  Mja:  MJ0247
  Mka:  MK1030
  Tac:  Ta0917
  Tvo:  TVN1062
  Pho:  PH0665 PHS020
  Pab:  PAB1465
  Pya:  PAE0720 PAE3038
  Sso:  SSO0397 SSO0405 SSO1047
  Ape:  APE0162 APE0441 APE2182
  Sce:  YBR088c
  Spo:  SPBC16D10.09
  Ecu:  ECU05g1030
  Aae:  aq_1882
  Tma:  TM0262
  Fnu:  FN0536 FN0617
  Dra:  DR0001
  Cac:  CAC0002
  Cgl:  Cgl0002
  Mtu:  Rv0002
  MtC:  MT0002
  Mle:  ML0002
  Lla:  L0275
  Spy:  SPy0003
  Spn:  SP0002
  Sau:  SA0002
  Lin:  lin0002
  Bsu:  BS_dnaN
  Bha:  BH0002
  Syn:  slr0965
  Nos:  alr2010 alr7569
  Eco:  dnaN
  EcZ:  ZdnaN
  Ecs:  ECs4636
  Ype:  YPO4096
  Sty:  STM3837
  Buc:  BU011
  Vch:  VC0013
  Pae:  PA0002
  Hin:  HI0992
  Pmu:  PM1160
  Xfa:  XF0002
  Nme:  NMB1902
  NmA:  NMA0553
  Rso:  RSc3441
  Hpy:  HP0500
  jHp:  jhp0452
  Cje:  Cj0002
  Atu:  AGc520
  Sme:  SMc00415
  Bme:  BMEI1942
  Mlo:  mll5580
  Ccr:  CC0156
  Rpr:  RP419
  Rco:  RC0583
  Ctr:  CT075
  Cpn:  CPn0338
  Tpa:  TP0002
  Bbu:  BB0438
  Uur:  UU079
  Mpu:  MYPU_0020
  Mpn:  MPN001
  Mge:  MG001
_______

[L] COG0593 ATPase involved in DNA replication initiation
  Aae:  aq_322
  Tma:  TM0926
  Dra:  DR0002
  Cac:  CAC0001
  Cgl:  Cgl0001
  Mtu:  Rv0001
  MtC:  MT0001
  Mle:  ML0001
  Lla:  L0274
  Spy:  SPy0002
  Spn:  SP0001
  Sau:  SA0001
  Lin:  lin0001
  Bsu:  BS_dnaA
  Bha:  BH0001
  Syn:  sll0848
  Nos:  alr2009
  Eco:  dnaA yfgE
  EcZ:  Z3759 ZdnaA
  Ecs:  ECs3358 ECs4637
  Ype:  YPO3071 YPO4097
  Sty:  STM2496 STM3838
  Buc:  BU012
  Vch:  VC0012
  Pae:  PA0001 PA0947
  Hin:  HI0993 HI1225.1
  Pmu:  PM0017 PM1161
  Xfa:  XF0001 XF0590
  Nme:  NMB1076 NMB1903
  NmA:  NMA0552 NMA1279
  Rso:  RSc2625 RSc3442
  Hpy:  HP1529
  jHp:  jhp1417
  Cje:  Cj0001
  Atu:  AGc1670 AGc2114 AGc566
  Sme:  SMc00617 SMc01167
  Bme:  BMEI1238 BMEI1362 BMEI1943
  Mlo:  mll5581 mlr7968
  Ccr:  CC0008 CC1058 CC1711
  Rpr:  RP601 RP631
  Rco:  RC0916 RC0979
  Ctr:  CT250 CT275
  Cpn:  CPn0309 CPn0424
  Tpa:  TP0001
  Bbu:  BB0437
  Uur:  UU001
  Mpu:  MYPU_0010
  Mpn:  MPN686
  Mge:  MG469
_______

[J] COG0594 RNase P protein component
  Tma:  TM1463
  Fnu:  FN0002
  Dra:  DR2151
  Cac:  CAC3738
  Cgl:  Cgl3038
  Mtu:  Rv3923c
  MtC:  MT4041
  Mle:  ML2712
  Lla:  L131443
  Spy:  SPy0246
  Spn:  SP2042
  Sau:  SA2502
  Lin:  lin2987
  Bsu:  BS_rnpA
  Bha:  BH4065
  Syn:  slr1469
  Nos:  alr3413
  Eco:  rnpA
  EcZ:  ZrnpA
  Ecs:  ECs4639
  Ype:  YPO4101
  Sty:  STM3840
  Buc:  BU014
  Vch:  VC0006
  Pae:  PA5569
  Hin:  HI0999
  Pmu:  PM1163
  Xfa:  XF2781
  Nme:  NMB1905
  NmA:  NMA0550
  Rso:  RSc0002
  Hpy:  HP1448
  jHp:  jhp1341
  Cje:  Cj0960c
  Sme:  SMc01720
  Bme:  BMEII0276
  Mlo:  mlr4810
  Ccr:  CC0768
  Rpr:  RP611
  Rco:  RC0937
  Ctr:  CT784
  Cpn:  CPn0934
  Tpa:  TP0950a
  Bbu:  BB0441
  Uur:  UU603
  Mpu:  MYPU_1530
  Mpn:  MPN681
  Mge:  MG465
_______

[R] COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily
  Hbs:  VNG1149Cm
  Mac:  MA0605
  Mth:  MTH49 MTH912
  Mja:  MJ0861
  Mka:  MK0315 MK0775 MK1258 MK1274
  Pho:  PH0466 PH1071
  Pab:  PAB1035 PAB1751
  Tma:  TM0663
  Fnu:  FN1210
  Dra:  DR2417m
  Cac:  CAC1683
  Cgl:  Cgl1924
  Mtu:  Rv2752c
  MtC:  MT2822
  Mle:  ML1512
  Lla:  L61727 L89418
  Spy:  SPy1020 SPy1876
  Spn:  SP0121 SP0613
  Sau:  SA0940 SA1118
  Lin:  lin1026 lin1473
  Bsu:  BS_ykqC BS_ymfA
  Bha:  BH2398 BH2662
  Syn:  slr0551
  Nos:  all3678
  Hpy:  HP1430
  jHp:  jhp1323
  Cje:  Cj1710c
  Atu:  AGc2368
  Sme:  SMc01929
  Bme:  BMEI1143
  Mlo:  mll1350
  Ccr:  CC1934
  Rpr:  RP441
  Rco:  RC0613
  Uur:  UU509 UU570
  Mpu:  MYPU_7040 MYPU_7050
  Mpn:  MPN280 MPN621
  Mge:  MG139 MG423
_______

[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 
  Afu:  AF0865 AF1537 AF1706 AF2336
  Hbs:  VNG0675C VNG1474G VNG6296C
  Mac:  MA0362 MA0736 MA0993 MA0994 MA1856 MA1857 MA2002
        MA2343 MA2691 MA2743 MA3611 MA3635
  Tac:  Ta0194m Ta0830 Ta0887 Ta1481
  Tvo:  TVN0086 TVN0910 TVN0975 TVN1167 TVN1402
  Pya:  PAE2936
  Sso:  SSO0102 SSO2262 SSO3115
  Ape:  APE2361
  Sce:  YDR125c YGR015c YGR031w YGR110w YHR075c YKL140w YLL012w
        YLR020c YLR099c YNL115c YNR064c YOR084w
  Spo:  SPAC22H12.03 SPAC23C11.06c SPAC57A10.08c SPAC6G10.03c SPBC14C8.15 SPBC16A3.12c SPBP4H10.17c
        SPCC1672.09
  Ecu:  ECU08g0180
  Aae:  aq_2138 aq_327
  Fnu:  FN0752 FN1062 FN1075 FN1345
  Dra:  DR0593 DR0654 DR0791 DR1326 DR1351 DR1352 DR1403
        DR2549 DRA0060 DRB0097
  Cac:  CAC0202 CAC0719 CAC0816 CAC1450 CAC1470 CAC2472 CAC2688
        CAC2936 CAC3402 CAC3432 CAC3515 CAP0097 CAP0133
  Cgl:  Cgl0091 Cgl0297 Cgl0575 Cgl1120 Cgl1152 Cgl2201 Cgl2342
        Cgl2678
  Mtu:  Rv0045c Rv0077c Rv0134 Rv0554 Rv0646c Rv0840c Rv1123c
        Rv1124 Rv1190 Rv1191 Rv1833c Rv1834 Rv1900c_1 Rv1938
        Rv2214c_1 Rv2223c Rv2224c Rv2296 Rv2579 Rv2672 Rv2695
        Rv2715 Rv3171c Rv3176c Rv3177 Rv3203 Rv3312c Rv3337
        Rv3338 Rv3473c Rv3569c Rv3591c Rv3617 Rv3670
  MtC:  MT0051 MT0083 MT0142 MT0580 MT0674 MT0862 MT1155
        MT1156 MT1227 MT1228 MT1881 MT1882 MT1951_1 MT1988
        MT2270_1 MT2281 MT2282 MT2353 MT2656 MT2746 MT2769
        MT2788 MT3260 MT3265 MT3266 MT3298 MT3411 MT3441
        MT3579 MT3674 MT3697 MT3719 MT3771
  Mle:  ML0376 ML0685 ML0862_1 ML1030 ML1339 ML1632 ML1633
        ML1899 ML1921 ML2269 ML2297
  Lla:  L0170 L130660 L34494
  Spn:  SP0666 SP0777
  Sau:  SA0569 SA0572 SA0897 SA2367
  Lin:  lin1546 lin1782 lin2214 lin2547 lin2825
  Bsu:  BS_nap BS_ybaC BS_ybdG BS_ybfK BS_ycgS BS_yclE BS_ydjP
        BS_yfhM BS_yisY BS_yqjL BS_yraK BS_ytxM BS_yugF BS_yvaM
        BS_yvfQ
  Bha:  BH0763 BH1839 BH2279 BH2719 BH3805 BH3908 BH3934
  Syn:  sll0249 sll0553 sll1129 sll1305 slr0314 slr0440 slr1235
        slr1807 slr1827 slr1916 slr1917 slr1932 slr2053
  Nos:  all0111 all0193 all0316 all1161 all1205 all1353 all2056
        all2058 all2068 all2753 all2761 all3898 all4221 alr0039
        alr0235 alr1270 alr1709 alr2406 alr3514 alr3685 alr4625
        alr5028
  Eco:  bioH mhpC ybfF ycdJ yfbB
  EcZ:  Z1508 Z1930 ZbioH ZmhpC ZybfF ZyfbB
  Ecs:  ECs0404 ECs0717 ECs1255 ECs1662 ECs3151 ECs4255
  Ype:  YPO0129 YPO1781 YPO2526 YPO2638
  Sty:  STM0332 STM0696 STM1380 STM2308 STM3079 STM3509
  Vch:  VC0522 VC1725 VC1974 VC1986 VC2097 VC2718
  Pae:  PA0231 PA0480 PA0502 PA0730 PA0829 PA1211 PA1621
        PA1622 PA1771 PA2086 PA2717 PA2745 PA2764 PA2934
        PA2949 PA3053 PA3132 PA3226 PA3324_1 PA3429 PA3479
        PA3509 PA3586 PA3994 PA4008 PA4152_2 PA5057 PA5080
        PA5513
  Hin:  HI0193 HI0282
  Pmu:  PM0055 PM0355
  Xfa:  XF0992 XF1356 XF1510 XF1965 XF2330 XFa0032
  Nme:  NMB0270 NMB0927
  NmA:  NMA1122 NMA2216
  Rso:  RSc0256 RSc0298 RSc1125 RSc1135 RSc1396 RSc1561 RSc1573
        RSc1574 RSc1770 RSc1841 RSc2250 RSc2328 RSc3406 RSp0196
        RSp0790 RSp1148 RSp1229 RSp1418 RSp1484 RSp1661
  Hpy:  HP0739
  jHp:  jhp0676
  Cje:  Cj0796c
  Atu:  AGc1974 AGc2897 AGc3327A AGc3731 AGc3940 AGc435 AGc4537
        AGl1247 AGl1832 AGl210 AGl2342 AGl2670 AGl2734 AGl47
        AGl652 AGpA264 AGpA295 AGpA317 AGpA424 AGpA427 AGpA561
        AGpA654 AGpA728 AGpA86 AGpA89 AGpT130
  Sme:  SMa0792 SMa1166 SMa1327 SMa1727 SMa1783 SMa1809 SMa2023
        SMa2031 SMa2032 SMb20010 SMb20054 SMb20216 SMb20221 SMb20579
        SMb20860 SMc00147 SMc00361 SMc01944 SMc02114 SMc02547 SMc03098
        SMc03810 SMc04031 SMc04033 SMc04165 SMc04308
  Bme:  BMEI0733 BMEI1608 BMEI1951 BMEI2011 BMEII0218_2 BMEII0638
  Mlo:  mll0351 mll0537 mll0601 mll1328 mll1329 mll1900 mll2018
        mll2481 mll2689 mll3776 mll5179 mll5392_1 mll5743 mll6871
        mll7742 mlr0145 mlr0170 mlr0493 mlr0978 mlr0992 mlr1789
        mlr1864 mlr2176 mlr2262 mlr2612 mlr2710 mlr2794 mlr3288
        mlr3816 mlr4436 mlr5063 mlr5354 mlr6682 mlr6683 mlr6684
        mlr6787 mlr7206 mlr7232 mlr7803 mlr8175 mlr9622 mlr9641
  Ccr:  CC0223 CC0352 CC0355 CC0384 CC0552 CC1053 CC1175
        CC1227 CC1229 CC1499 CC2230 CC2395 CC2411_1 CC2565
        CC2763 CC2797 CC3091 CC3099 CC3300 CC3308 CC3442
        CC3634 CC3725
  Rpr:  RP343 RP444
  Rco:  RC0464 RC0617
  Bbu:  BB0646
  Uur:  UU021
  Mpu:  MYPU_0330 MYPU_0350 MYPU_0360 MYPU_0370 MYPU_0380
  Mpn:  MPN022 MPN445 MPN473 MPN519
  Mge:  MG020 MG310 MG327 MG344
_______

[MU] COG0597 Lipoprotein signal peptidase
  Aae:  aq_1837
  Tma:  TM0463
  Fnu:  FN0068
  Dra:  DR2388
  Cac:  CAC2115
  Cgl:  Cgl2088
  Mtu:  Rv1539
  MtC:  MT1591
  Mle:  ML1199
  Lla:  L0335
  Spy:  SPy0826
  Spn:  SP0928
  Sau:  SA1039
  Lin:  lin1958
  Bsu:  BS_lsp
  Bha:  BH2543
  Syn:  slr1366
  Nos:  alr4577
  Eco:  lspA
  EcZ:  ZlspA
  Ecs:  ECs0030
  Ype:  YPO0476
  Sty:  STM0047
  Buc:  BU148
  Vch:  VC0683
  Pae:  PA4559
  Hin:  HI1006
  Pmu:  PM1663
  Xfa:  XF2417
  Nme:  NMB1832
  NmA:  NMA0623
  Rso:  RSc2459
  Hpy:  HP0074
  jHp:  jhp0069
  Cje:  Cj0361
  Atu:  AGc596
  Sme:  SMc01129
  Bme:  BMEI1799
  Mlo:  mlr3211
  Ccr:  CC0700
  Rpr:  RP408
  Rco:  RC0558
  Ctr:  CT408
  Cpn:  CPn0535
  Tpa:  TP0978
  Bbu:  BB0469
  Uur:  UU314
  Mpu:  MYPU_6680
  Mpn:  MPN293
  Mge:  MG210
_______

[P] COG0598 Mg2+ and Co2+ transporters
  Afu:  AF0786
  Mac:  MA1721
  Mja:  MJ1033
  Pho:  PH0144
  Pya:  PAE2442
  Sso:  SSO1307
  Sce:  YFL050c_2 YKL064w_2 YOL130w_2
  Spo:  SPBC27B12.12c_2 SPBPI066_2
  Aae:  aq_851
  Tma:  TM0561
  Fnu:  FN0332
  Dra:  DR2399 DR2463 DRA0361
  Cac:  CAC0294 CAC1852
  Cgl:  Cgl0061
  Mtu:  Rv1239c
  MtC:  MT1277
  Mle:  ML1090
  Lla:  L111525 L13157 L56275
  Spy:  SPy1827
  Spn:  SP0185 SP1751
  Sau:  SA2137 SA2166
  Lin:  lin0568 lin0651 lin1052
  Bsu:  BS_yfjQ BS_yqxL
  Syn:  sll0507 sll0671
  Nos:  all4110
  Eco:  corA ydaN
  EcZ:  Z2419 Z5336 ZcorA
  Ecs:  ECs1926 ECs4746
  Ype:  YPO2338 YPO3837
  Sty:  STM1656 STM3952
  Vch:  VC2334
  Pae:  PA1773 PA1873 PA5268
  Hin:  HI1035
  Pmu:  PM1315
  Xfa:  XF0900
  Rso:  RSc2774 RSp0665
  Hpy:  HP1344
  jHp:  jhp1263
  Cje:  Cj0726c Cj1011
  Atu:  AGc1285 AGc1326
  Sme:  SMc00399 SMc00874 SMc00978
  Bme:  BMEI1374
  Mlo:  mll5759 mll7807 mlr2697 mlr5559 mlr5644 mlr9579
  Ccr:  CC1795 CC3181
  Rco:  RC0943
_______

[S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
  Afu:  AF0348
  Mac:  MA0409 MA0796 MA2289 MA2875 MA3152 MA3736 MA3946
        MA3953 MA3991 MA4072
  Mth:  MTH234 MTH63 MTH691 MTH935
  Mja:  MJ0742 MJ1511
  Mka:  MK0543
  Tac:  Ta0244
  Tvo:  TVN1348
  Sso:  SSO2884
  Sce:  YJR111c
  Spo:  SPBC17D11.03c
  Tma:  TM0316 TM1620
  Dra:  DR0973 DR1204
  Cgl:  Cgl1022 Cgl2344 Cgl2842
  Mtu:  Rv0771 Rv1767
  MtC:  MT0795 MT1817
  Lla:  L178933 L35675
  Lin:  lin0666
  Bsu:  BS_yurZ
  Bha:  BH3473
  Syn:  slr1853
  Ype:  YPO1999 YPO3649
  Pae:  PA0232 PA0565 PA4486
  Hin:  HI1053
  Xfa:  XF1766
  Nme:  NMB1590
  NmA:  NMA1782
  Rso:  RSc0631 RSc2249 RSp1472
  Atu:  AGc1569 AGc1801 AGl653 AGpA316
  Sme:  SMa0316 SMa0559 SMb20578
  Bme:  BMEII0637
  Mlo:  mll5391 mll7882 mlr7207
  Ccr:  CC2411_2
_______

[P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
  Afu:  AF0086 AF0639
  Mac:  MA0064
  Mja:  MJ0413
  Mka:  MK0602
  Tma:  TM0203 TM0485
  Fnu:  FN0237
  Dra:  DR0511_2 DR2197
  Cac:  CAC0108 CAC0618 CAC1399
  Cgl:  Cgl1193
  Spn:  SP2198
  Sau:  SA0168
  Bsu:  BS_ssuC BS_ytlD
  Bha:  BH1210 BH2681
  Syn:  sll1081 sll1451 slr0041
  Nos:  all3335 alr0609 alr2878 alr3287
  Eco:  ssuC tauC
  EcZ:  ZtauC ZycbM
  Ecs:  ECs0421 ECs1017
  Ype:  YPO0184 YPO2287 YPO3626
  Pae:  PA0185 PA2295 PA2307 PA2327 PA3443 PA3448 PA3512
        PA3936
  Hin:  HI0355
  Pmu:  PM1265
  Rso:  RSc0380 RSc1200 RSc1340 RSp1508
  Atu:  AGc1933 AGc257 AGc4334 AGc4335 AGl1202 AGl128GM AGl1398
        AGl1888 AGl3063 AGl927 AGpT116 AGpT164
  Sme:  SMa0583 SMb20182 SMb20571 SMb21528 SMc01825 SMc01826 SMc02345
  Bme:  BMEI1739 BMEII0107 BMEII0799 BMEII0962
  Mlo:  mll1254 mll1292 mll1623 mll1624 mll1758 mll4557 mll6977
        mll8571 mll9180 mlr2860 mlr4519 mlr6798 mlr7114 mlr7951
  Ccr:  CC0610 CC1832 CC2635
  Ctr:  CT854_1
  Cpn:  CPn1012_1
_______

[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
  Afu:  AF1768
  Hbs:  VNG2347G VNG2359G VNG2529G
  Mac:  MA0301 MA0700 MA0842 MA0881 MA1247 MA1913 MA2481
        MA2484 MA3049 MA3462 MA3906 MA4250 MA4600 MA4673
  Tac:  Ta0263 Ta0268 Ta1328
  Tvo:  TVN1331
  Pho:  PH0503 PH0808 PH1410 PH1816 PH1961
  Pab:  PAB0092 PAB0628 PAB1194 PAB1344 PAB1872
  Pya:  PAE1299 PAE2393 PAE3087
  Sso:  SSO1274 SSO1284 SSO2618 SSO2668 SSO3048 SSO3058
  Ape:  APE0303 APE1395 APE1582 APE2258
  Aae:  aq_481
  Tma:  TM0030 TM0060 TM0072 TM0301 TM0503 TM0532 TM1066
        TM1149 TM1198 TM1222 TM1747
  Fnu:  FN0193 FN0397 FN1113 FN1360 FN1503 FN1521 FN1651
  Dra:  DR0364 DR0959 DR1570 DRA0209
  Cac:  CAC0177 CAC2375 CAC3180 CAC3631 CAC3638 CAC3644
  Cgl:  Cgl1945 Cgl2269 Cgl2384 Cgl2600
  Mtu:  Rv1283c Rv3665c
  MtC:  MT1320 MT3766
  Mle:  ML1124
  Lla:  L147009 L91252
  Spy:  SPy0294_2 SPy2001
  Spn:  SP1890_2
  Sau:  SA0199 SA0845 SA0853 SA1214 SA2254
  Lin:  lin0183 lin0294_1 lin2299
  Bsu:  BS_appB BS_dppB BS_oppB
  Bha:  BH0029 BH0348 BH0568 BH1797 BH2075 BH3638 BH3643
  Syn:  sll0312 sll1768
  Nos:  all2012 alr0141 alr4583
  Eco:  ddpB dppB nikB oppB yliC
  EcZ:  Z1055 Z2224 ZdppB ZnikB ZoppB
  Ecs:  ECs0910 ECs1744 ECs2090 ECs4344 ECs4423
  Ype:  YPO2183 YPO2661 YPO3450 YPO4002
  Sty:  STM0850 STM1256 STM1745 STM3629
  Vch:  VC0172 VC0619 VC1092 VCA1099
  Pae:  PA4503
  Hin:  HI1123 HI1187
  Pmu:  PM0237 PM1909
  Rso:  RSc1381 RSc1882 RSc2869
  Hpy:  HP0299
  jHp:  jhp0284
  Cje:  Cj1583c
  Atu:  AGc2209 AGc4572 AGc4689 AGl1206 AGl1327 AGl1478 AGl2740
        AGl2785 AGl2823 AGl2886 AGl3101 AGl3202 AGl323 AGl3514
        AGl3536 AGl368 AGl441 AGl522 AGl689 AGl857 AGl871
        AGpA363 AGpA494 AGpA96 AGpT148 AGpT261
  Sme:  SMa0105 SMa0300 SMa0467 SMa1373 SMa1437 SMa1650 SMa1862
        SMa2085 SMb20109 SMb20143 SMb20477 SMb21038 SMb21197 SMb21262
        SMb21646 SMc00787 SMc01526 SMc01643 SMc02029 SMc02418 SMc03127
        SMc03754 SMc04034 SMc04294
  Bme:  BMEI0435 BMEII0202 BMEII0209 BMEII0220 BMEII0285 BMEII0488 BMEII0505
        BMEII0736 BMEII0860
  Mlo:  mll0597 mll1659 mll2275 mll5126 mll5440 mll7033 mll7246
        mll7348 mll9135 mll9144 mlr0988 mlr1187 mlr3266 mlr3397
        mlr5417 mlr5514 mlr5896 mlr6083 mlr6289 mlr6445 mlr6671
        mlr7598 mlr9211 mlr9272
  Ctr:  CT199 CT479
  Cpn:  CPn0199 CPn0598
  Bbu:  BB0332 BB0747
  Uur:  UU562
  Mpu:  MYPU_2830 MYPU_4100 MYPU_6200
  Mpn:  MPN215
  Mge:  MG077
_______

[O] COG0602 Organic radical activating enzymes
  Afu:  AF0441
  Hbs:  VNG6305C
  Mac:  MA4197
  Mth:  MTH1227 MTH287
  Mja:  MJ1645
  Mka:  MK0818
  Tac:  Ta1359
  Tvo:  TVN0296
  Pho:  PH0635
  Pab:  PAB1446
  Pya:  PAE0010
  Sso:  SSO0624
  Aae:  aq_2035
  Fnu:  FN0312
  Cac:  CAC0481 CAC3625
  Lla:  L72609
  Spy:  SPy2105
  Spn:  SP0205
  Sau:  SA0665 SA2409
  Lin:  lin0306
  Bsu:  BS_ykvL
  Bha:  BH2242
  Syn:  sll2011
  Nos:  alr0731 alr4161
  Eco:  nrdG ygcF
  EcZ:  ZnrdG ZygcF
  Ecs:  ECs3633 ECs5214
  Ype:  YPO3374 YPO3455
  Sty:  STM2951 STM4451
  Vch:  VC1365 VCA0512
  Pae:  PA0975 PA2726
  Hin:  HI1155 HI1189
  Pmu:  PM0184 PM0941
  Xfa:  XF1894
  Nme:  NMB0529
  NmA:  NMA0707
  Rso:  RSc1449
  Hpy:  HP0934
  jHp:  jhp0868
  Cje:  Cj0160c
  Atu:  AGl2955
  Sme:  SMb20938
  Bme:  BMEI0093
  Mlo:  mll5796 msl8680
  Ccr:  CC3159
  Rpr:  RP607
  Rco:  RC0933
_______

[R] COG0603 Predicted PP-loop superfamily ATPase
  Afu:  AF0442
  Hbs:  VNG6303G
  Mac:  MA4199
  Mth:  MTH1108
  Mja:  MJ1347
  Mka:  MK1065
  Tac:  Ta0951
  Tvo:  TVN1096
  Pho:  PH0085
  Pab:  PAB2286
  Pya:  PAE2074
  Sso:  SSO0016_2 SSO0544
  Ape:  APE1470
  Aae:  aq_831 aq_848
  Cac:  CAC3627
  Sau:  SA0667
  Bsu:  BS_ykvJ
  Bha:  BH2244
  Syn:  slr0527
  Nos:  alr5095
  Eco:  ybaX
  EcZ:  ZybaX
  Ecs:  ECs0498
  Ype:  YPO3150
  Sty:  STM0455
  Vch:  VC1366
  Pae:  PA0976
  Hin:  HI1191
  Pmu:  PM0186
  Xfa:  XF1858
  Nme:  NMB0525
  NmA:  NMA0702
  Rso:  RSc0738
  Hpy:  HP0639
  jHp:  jhp0582
  Cje:  Cj0016
  Atu:  AGl2950
  Sme:  SMb20940
  Bme:  BMEI0095
  Mlo:  mll5798 mll5936 mll6423
  Ccr:  CC3160
  Rpr:  RP694
  Rco:  RC1070
_______

[CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases
  Hbs:  VNG1821G
  Mac:  MA0771 MA0773
  Tac:  Ta1316
  Tvo:  TVN0265
  Pya:  PAE2687
  Sso:  SSO0106 SSO2334 SSO2800
  Sce:  YBL069w YBR026c YBR046c YCR102c YER101c YLR460c YMR152w
        YNL134c
  Spo:  SPAC26F1.04c SPAC2E1P3.01 SPBC16A3.02c SPBC1773.06c SPBC337.11 SPCC1442.16c
  Aae:  aq_1362
  Dra:  DR1061 DR1489 DRA0251
  Cgl:  Cgl0204 Cgl1534 Cgl2485 Cgl2908 Cgl2948 Cgl3015
  Mtu:  Rv0149 Rv1454c Rv1912c Rv3141 Rv3777
  MtC:  MT0157 MT1501 MT1963 MT3228 MT3886
  Mle:  ML0118
  Lla:  L123116
  Sau:  SA1988 SA2160 SAP008
  Lin:  lin0622 lin0767 lin2718
  Bsu:  BS_yhfP BS_yogA
  Bha:  BH0363 BH0738 BH0935 BH1466
  Nos:  all0412 alr2948
  Eco:  qor yhdH
  EcZ:  Zqor ZyhdH
  Ecs:  ECs4125 ECs5033
  Ype:  YPO0319 YPO1653 YPO3663
  Sty:  STM3376 STM4245
  Vch:  VC0026 VC0552
  Pae:  PA0023 PA0863 PA1137 PA1833 PA2491 PA2680 PA3256
        PA3567 PA5234
  Pmu:  PM1940
  Xfa:  XF0451
  Rso:  RSc0636 RSc0638 RSc1203 RSc2065 RSc2184 RSc2891
  Atu:  AGc1508 AGc1830 AGc2931 AGl35 AGpA254 AGpA262 AGpA298
        AGpA466 AGpA656
  Sme:  SMa0041 SMa2383 SMb20388 SMb20422 SMb21290 SMc00034 SMc00246
        SMc00968 SMc01816 SMc02380 SMc04270
  Bme:  BMEI0302 BMEI1114 BMEII0696 BMEII0697 BMEII0876
  Mlo:  mll0505 mll1929 mll2116 mll2578 mll2594 mll3093 mll3767
        mll3915 mll7125 mll7162 mll8195 mlr1178 mlr1913 mlr2819
        mlr3212 mlr3236 mlr7750
  Ccr:  CC0096 CC0770 CC1569 CC2125 CC2353 CC3085 CC3293
        CC3759
_______

[P] COG0605 Superoxide dismutase
  Hbs:  VNG1190G VNG1332G
  Mac:  MA1574
  Mth:  MTH160
  Tac:  Ta0013
  Tvo:  TVN0061
  Pya:  PAE0274
  Sso:  SSO0316
  Ape:  APE0741
  Sce:  YDR347w YHR008c YJR101w
  Spo:  SPAC1486.01 SPBC16A3.14 SPBC3H7.04
  Ecu:  ECU11g1080
  Aae:  aq_1499
  Dra:  DR1279
  Cac:  CAC2567
  Cgl:  Cgl2862
  Mtu:  Rv3846
  MtC:  MT3960
  Mle:  ML0072
  Lla:  L12227
  Spy:  SPy1406
  Spn:  SP0766
  Sau:  SA0128 SA1382
  Lin:  lin1478
  Bsu:  BS_sodA BS_sodF
  Bha:  BH1409 BH1563
  Syn:  slr1516
  Nos:  all0070 alr2938
  Eco:  sodA sodB
  EcZ:  ZsodA ZsodB
  Ecs:  ECs2365 ECs4834
  Ype:  YPO2386 YPO4061
  Sty:  STM1431 STM4055
  Buc:  BU189
  Vch:  VC2045 VC2694
  Pae:  PA4366 PA4468
  Hin:  HI1088
  Pmu:  PM0001
  Xfa:  XF1921 XF2614
  Nme:  NMB0884
  NmA:  NMA1104
  Rso:  RSc2526
  Hpy:  HP0389
  jHp:  jhp0992
  Cje:  Cj0169
  Atu:  AGc1601 AGl313 AGl579
  Sme:  SMc00043
  Bme:  BMEI1367
  Mlo:  mlr7636
  Ccr:  CC1777 CC3557
  Rpr:  RP535
  Rco:  RC0778
  Ctr:  CT294
  Cpn:  CPn0057
  Bbu:  BB0153
_______

[O] COG0606 Predicted ATPase with chaperone activity
  Mth:  MTH210 MTH616
  Mka:  MK0708
  Aae:  aq_291
  Tma:  TM0513
  Fnu:  FN1614
  Dra:  DR1656
  Cac:  CAC1765
  Cgl:  Cgl1983
  Mtu:  Rv2897c
  MtC:  MT2965
  Syn:  slr0904
  Nos:  alr4088
  Eco:  yifB
  EcZ:  ZyifB
  Ecs:  ECs4700
  Ype:  YPO3902
  Sty:  STM3899
  Vch:  VC0032
  Pae:  PA5290
  Hin:  HI1117
  Pmu:  PM1510
  Xfa:  XF1179
  Nme:  NMB0405
  NmA:  NMA2080
  Rso:  RSc0338
  Hpy:  HP0792
  jHp:  jhp0728
  Cje:  Cj0190c
  Atu:  AGc541
  Sme:  SMc00420
  Bme:  BMEI1994 BMEI1995
  Mlo:  mll4667 mll4733
  Ccr:  CC0140
  Rco:  RC0435 RC0436 RC0437
  Bbu:  BB0086
_______

[P] COG0607 Rhodanese-related sulfurtransferase
  Afu:  AF0400_2
  Hbs:  VNG0440C_1 VNG2582H VNG6060C_1 VNG6066C_1 VNG6460C_1 VNG6466C_1 VNG7043_1
        VNG7049_1 VNG7160_1 VNG7166_1
  Mac:  MA0746 MA1794_2 MA2320_2 MA2500 MA3178
  Mth:  MTH1096
  Tac:  Ta0506m_2 Ta0643
  Tvo:  TVN0790_2 TVN0830
  Pya:  PAE3421_2
  Sso:  SSO2151 SSO2634
  Sce:  YHR111w_2 YOR285w YOR286w
  Spo:  SPAC2G11.10c_2 SPAC4H3.07c SPBC839.07
  Ecu:  ECU03g1290_2
  Aae:  aq_1599 aq_477
  Fnu:  FN0870 FN1903_2
  Dra:  DR0570 DRA0304_2
  Cac:  CAP0032 CAP0034
  Cgl:  Cgl0052_2 Cgl0054 Cgl0055 Cgl0209_2 Cgl1279_2 Cgl1994_2 Cgl2653
  Mtu:  Rv0324_2 Rv0390 Rv1066 Rv1674c_2 Rv3116_2 Rv3206c_2
  MtC:  MT0339_2 MT1096 MT1712_2 MT3198_2 MT3301_2
  Mle:  ML0276 ML0817_2
  Lla:  L193291 L193718 L194050_2 L85091
  Spy:  SPy1528
  Spn:  SP0678
  Sau:  SA0042 SA0043_2 SA0044_1 SA0082_1 SA0083_2 SA1364 SA1578
  Lin:  lin0618 lin1388 pli0040_2
  Bsu:  BS_yqhL BS_yrkF_2 BS_ytwF
  Bha:  BH2092 BH2813 BH2920
  Syn:  sll1536_2 slr0192 slr1184 slr1261
  Nos:  all1508 all2906_2 all3991 alr2407 alr3790 alr3905 alr4043
  Eco:  glpE pspE thiI_2 ygaP yibN
  EcZ:  Z2165 ZglpE ZpspE ZyajK_2 ZygaP ZyibN
  Ecs:  ECs0477_2 ECs1885 ECs3529 ECs4268 ECs4489
  Ype:  YPO0065 YPO0122 YPO2008 YPO3001_2 YPO3173_2
  Sty:  STM0425_2 STM1686 STM2798 STM3525 STM3703
  Buc:  BU052
  Vch:  VC0100 VC0894_2 VC2654 VCA0100 VCA0643 VCA0644_2 VCA1053
  Pae:  PA0589 PA1209_2 PA2103_2 PA2603 PA5118_2 PA5130
  Hin:  HI0679 HI0744 HI1436.1_2
  Pmu:  PM0535_2 PM1433 PM1436 PM1480
  Xfa:  XF0466_1 XF1800 XF2394_3
  Nme:  NMB0784 NMB1884
  NmA:  NMA0573 NMA0994
  Rso:  RSc0272 RSc0296 RSc0354 RSc0696 RSc1257 RSp0396_2 RSp1428
  Hpy:  HP1223
  jHp:  jhp1144
  Cje:  Cj0519
  Atu:  AGpTbx104
  Sme:  SMb20176 SMc00911_1 SMc01757
  Mlo:  mlr0536 mlr3845 mlr5406_1
  Ccr:  CC2863 CC3366
  Rpr:  RP600
  Rco:  RC0915
  Bbu:  BB0016
_______

[L] COG0608 Single-stranded DNA-specific exonuclease
  Afu:  AF0075 AF0291 AF0699 AF0735
  Hbs:  VNG2333C
  Mac:  MA0823 MA2569 MA3432
  Mth:  MTH1422 MTH164
  Mja:  MJ0831 MJ0977 MJ1071
  Mka:  MK0061 MK0204 MK1592
  Tac:  Ta0527 Ta1132m
  Tvo:  TVN1003 TVN1209
  Pho:  PH0059
  Pab:  PAB0034 PAB1596
  Pya:  PAE2792 PAE2794a
  Sso:  SSO0295
  Aae:  aq_2155
  Tma:  TM1546
  Fnu:  FN0374 FN2018
  Dra:  DR1126
  Cac:  CAC1198 CAC2232 CAC2276
  Cgl:  Cgl1691
  Lla:  L0259_1
  Spy:  SPy0926_1
  Spn:  SP0611_1
  Sau:  SA1462_1
  Lin:  lin1560_1
  Bsu:  BS_yorK BS_yrvE_1
  Bha:  BH1240_1
  Syn:  sll1354_1
  Nos:  all1989 alr5127
  Eco:  recJ
  EcZ:  ZrecJ
  Ecs:  ECs3764
  Ype:  YPO0890
  Sty:  STM3042
  Vch:  VC2417
  Pae:  PA3725
  Hin:  HI1214
  Pmu:  PM0192
  Xfa:  XF1110
  Nme:  NMB0842
  NmA:  NMA1052
  Rso:  RSc1115
  Hpy:  HP0348 HP0425 HP1410
  jHp:  jhp0322 jhp1303
  Cje:  Cj0028
  Atu:  AGc2915
  Sme:  SMc00292
  Bme:  BMEI0728
  Mlo:  mll0927
  Ccr:  CC1386
  Rpr:  RP528
  Rco:  RC0761
  Ctr:  CT447
  Cpn:  CPn0563
  Tpa:  TP0704
  Bbu:  BB0254
_______

[P] COG0609 ABC-type Fe3+-siderophore transport system, permease component
  Afu:  AF0431 AF1402
  Hbs:  VNG1370G VNG2551G VNG2560G
  Mac:  MA0951 MA1131 MA1199 MA1234 MA1847 MA2149 MA2774
        MA2775 MA3359 MA3452 MA3641 MA3921 MA4533 MA4605
  Mja:  MJ0087 MJ0876 MJ0877m
  Tac:  Ta0172
  Tvo:  TVN0283
  Pho:  PH0790 PH1236
  Pab:  PAB0677 PAB1535
  Pya:  PAE0366
  Sso:  SSO0486
  Ape:  APE1053
  Tma:  TM0079 TM0190
  Fnu:  FN0301 FN0306 FN0769 FN0884 FN1969
  Dra:  DR2589 DRB0015 DRB0122 DRB0123
  Cac:  CAC0788 CAC0789 CAC1990 CAC2442
  Cgl:  Cgl0386 Cgl0493 Cgl0647 Cgl0648 Cgl0656 Cgl1588 Cgl2060
  Lla:  L127476 L128386
  Spy:  SPy0383 SPy0384 SPy1794
  Spn:  SP1033 SP1034
  Sau:  SA0109 SA0110 SA0567 SA0603 SA0604 SA0981 SA1977
        SA1978
  Lin:  lin2071 lin2072 lin2287 lin2524
  Bsu:  BS_feuB BS_feuC BS_fhuB BS_fhuG BS_yfhA BS_yfiZ BS_yfmD
        BS_yfmE BS_yvrB
  Bha:  BH1038 BH1082 BH1083 BH1586 BH3291 BH3296 BH3789
        BH3790
  Syn:  slr1316 slr1317
  Nos:  all0387 all2585 all2586 alr3240 alr4032
  Eco:  fecC fecD fepD fhuB
  EcZ:  Z1965 Z4383 Z4384 ZchuU ZfepD ZfhuB
  Ecs:  ECs0157 ECs0629 ECs1698 ECs3914 ECs3915 ECs4386
  Ype:  YPO0280 YPO1311 YPO1344 YPO1535 YPO3390
  Sty:  STM0194 STM0592 STM0770
  Vch:  VC0203 VC0777 VCA0914
  Pae:  PA2914 PA4160 PA4707
  Hin:  HI1271 HI1471
  Pmu:  PM0129 PM0130 PM1079 PM1148 PM1308
  Rso:  RSc2399
  Hpy:  HP0889
  jHp:  jhp0822
  Cje:  Cj1615
  Atu:  AGc4466 AGl1658 AGl2295 AGl2296 AGl2856 AGl2865 AGpA449
  Sme:  SMa1742 SMa1745 SMb20057 SMb21430 SMc01511
  Bme:  BMEI0659 BMEII0536
  Mlo:  mll1150 mlr8229
  Ccr:  CC1192
  Uur:  UU022 UU023 UU025 UU070 UU357 UU358 UU399
        UU400 UU515 UU516
_______

[V] COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
  Afu:  AF1708
  Hbs:  VNG0108G
  Mac:  MA2451
  Mth:  MTH940
  Mja:  MJ0124m MJ1214 MJECL40
  Pab:  PAB2154
  Lla:  L0308
  Spy:  SPy1904
  Sau:  SA0189
  Lin:  lin0521
  Nos:  all2684 alr0509 alr0510 alr4604
  Vch:  VC1765
  Pae:  PA2732
  Hin:  HI0218 HI1285
  Pmu:  PM1541
  Xfa:  XF2721 XF2725 XF2739
  Nme:  NMB0833 NMB0835
  Hpy:  HP0464 HP0846 HP1402
  jHp:  jhp0784 jhp1424
  Cje:  Cj1549c
  Sme:  SMc02292
  Bme:  BMEII0449
  Ccr:  CC0623
  Rco:  RC0873
  Uur:  UU095
  Mpu:  MYPU_0770 MYPU_0780 MYPU_4320 MYPU_6770
  Mpn:  MPN345 MPN346 MPN347
_______

[H] COG0611 Thiamine monophosphate kinase
  Afu:  AF0733
  Hbs:  VNG2011G
  Mac:  MA0069
  Mth:  MTH1396
  Mja:  MJ0028
  Mka:  MK0607
  Tac:  Ta0526
  Tvo:  TVN1002
  Pho:  PH1833
  Pab:  PAB2358
  Pya:  PAE1022
  Sso:  SSO0237
  Ape:  APE0235
  Aae:  aq_2119
  Cgl:  Cgl1291
  Mtu:  Rv2977c
  MtC:  MT3055
  Mle:  ML1676
  Bsu:  BS_ydiA
  Bha:  BH0544
  Syn:  slr1787
  Nos:  alr5061
  Eco:  thiL
  EcZ:  ZthiL
  Ecs:  ECs0470
  Ype:  YPO3180
  Sty:  STM0419
  Buc:  BU460
  Vch:  VC2266
  Pae:  PA4051
  Hin:  HI1305
  Pmu:  PM0729
  Xfa:  XF0956
  Nme:  NMB0385
  NmA:  NMA2103
  Rso:  RSc2768
  Cje:  Cj1458c
  Ccr:  CC1361
_______

[R] COG0612 Predicted Zn-dependent peptidases
  Pya:  PAE0368
  Ape:  APE0212
  Sce:  YBL045c YHR024c YLR163c YPR191w
  Spo:  SPBC18E5.12c SPBP23A10.15c SPCC613.10
  Aae:  aq_1271 aq_2204
  Tma:  TM1346
  Fnu:  FN1029
  Dra:  DR1598 DR2515 DR2516
  Cac:  CAC0659 CAC1630 CAC2411
  Mtu:  Rv2782c
  MtC:  MT2852
  Mle:  ML0855
  Lla:  L31393 L32666
  Spy:  SPy2198 SPy2199
  Spn:  SP2224 SP2225
  Sau:  SA1121 SA1122
  Lin:  lin1429 lin1430
  Bsu:  BS_ymfF BS_ymfG BS_ymfH BS_ymxG BS_ywhN BS_ywhO
  Bha:  BH2392 BH2393 BH2405
  Syn:  sll0055 sll0915 sll2008 sll2009 slr1331
  Nos:  all1021 all1939 all1940 alr2743 alr2744 alr5125
  Eco:  pqqL yhjJ
  EcZ:  ZpqqL ZyhjJ
  Ecs:  ECs2099 ECs4407
  Ype:  YPO3991
  Sty:  STM3613
  Vch:  VC0554 VC1709
  Pae:  PA0371 PA0372 PA5474
  Hin:  HI1368
  Pmu:  PM0804
  Xfa:  XF0816
  Rso:  RSc0387 RSc0388
  Hpy:  HP0657 HP1012
  jHp:  jhp0411 jhp0602
  Cje:  Cj0463 Cj0805
  Atu:  AGc1439
  Sme:  SMc00451
  Bme:  BMEI1451 BMEII1036 BMEII1037
  Mlo:  mll7516 mlr8255 mlr8256
  Ccr:  CC2578 CC2638 CC3398 CC3584
  Rpr:  RP219
  Rco:  RC0293
  Bbu:  BB0536
_______

[R] COG0613 Predicted metal-dependent phosphoesterases (PHP family)
  Afu:  AF0505
  Hbs:  VNG0370Hm VNG0865C VNG2493C
  Mac:  MA0454 MA0703 MA3621
  Mth:  MTH1478 MTH1479
  Mja:  MJ0417 MJ1587
  Sso:  SSO0873
  Ape:  APE0085
  Aae:  aq_1230
  Tma:  TM0559 TM1352
  Dra:  DR2235
  Cac:  CAC1092
  Bha:  BH2283 BH3372
  Syn:  sll0549
  Nos:  alr2940
  Eco:  yciV
  EcZ:  ZyciV
  Ecs:  ECs1838
  Ype:  YPO2211
  Sty:  STM1721
  Vch:  VC1177
  Pae:  PA3200
  Hin:  HI1400
  Pmu:  PM0616
  Nme:  NMB1824
  NmA:  NMA0635
  Rso:  RSc1140
_______

[P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component
  Afu:  AF0432 AF1397m
  Hbs:  VNG0316C VNG1369G
  Mac:  MA0952 MA1128 MA1130 MA1197 MA1200 MA1204_2 MA1222
        MA1230 MA1231 MA1232 MA1850 MA2148 MA2153 MA2156
        MA2772 MA2777 MA3357 MA3451 MA3640 MA3922 MA3930
        MA3931 MA4534_2 MA4536 MA4604
  Mja:  MJ0085 MJ0642 MJ0872 MJ0878
  Tac:  Ta0171 Ta0447
  Tvo:  TVN0284 TVN1048
  Pho:  PH1237 PH1659
  Pab:  PAB0349 PAB0676
  Pya:  PAE0367 PAE0934
  Sso:  SSO0128 SSO0485
  Ape:  APE1049_2 APE1688
  Tma:  TM0080 TM0189
  Fnu:  FN0300 FN0305 FN0767 FN0885 FN1970
  Dra:  DR0462 DR1373 DR2588 DRB0007 DRB0125
  Cac:  CAC0790 CAC1988 CAC2441
  Cgl:  Cgl0335 Cgl0627 Cgl0649 Cgl0654 Cgl0785 Cgl1228 Cgl1589
        Cgl1988 Cgl2061 Cgl2062 Cgl3014
  Mtu:  Rv0265c Rv3044
  MtC:  MT0278 MT3129
  Mle:  ML1729
  Lla:  L129403
  Spy:  SPy0385 SPy1795
  Spn:  SP1032
  Sau:  SA0111 SA0566 SA0980 SA2079
  Lin:  lin0545 lin1061 lin2073 lin2288 lin2525
  Bsu:  BS_feuA BS_fhuD BS_ybbB_2 BS_yfiY BS_yvrC BS_yxeB
  Bha:  BH0990 BH1037 BH1585 BH3290 BH3297 BH3403 BH3791
        BH3890
  Syn:  sll1202 slr1319 slr1491 slr1492
  Nos:  all0388 all1100 all2147 all2157 all2235 all2578_2 all2609
        all2618 all4923 alr0543 alr2176 alr2186 alr2210 alr2212
        alr2213 alr2583 alr2590 alr2593 alr2597 alr2627 alr3243
        alr3938 alr4031
  Eco:  fhuD yadT
  EcZ:  Z1966 Z4382 ZfhuD ZyadT
  Ecs:  ECs0156 ECs0162 ECs1699 ECs3913
  Ype:  YPO0955 YPO1310 YPO1343 YPO1536 YPO3385 YPO3391
  Sty:  STM0193 STM0206 STM3142
  Vch:  VC0202 VC2381
  Pae:  PA2913 PA4045
  Hin:  HI1268 HI1472
  Pmu:  PM1149 PM1307
  Rso:  RSc0283 RSc2394
  Hpy:  HP1561 HP1562
  jHp:  jhp1469 jhp1470
  Cje:  Cj1617
  Atu:  AGl1659 AGl2299 AGl2853 AGl2862 AGl2863 AGpA447
  Sme:  SMa1746 SMb20056 SMb21431 SMb21432 SMc01659
  Bme:  BMEI0658 BMEII0535
  Mlo:  mlr8228
  Ccr:  CC1191
_______

[MI] COG0615 Cytidylyltransferase
  Afu:  AF1418
  Hbs:  VNG0777G
  Mac:  MA1820
  Mth:  MTH844
  Mja:  MJ1179
  Mka:  MK0578
  Tac:  Ta1139
  Tvo:  TVN1215
  Pho:  PH0735
  Pab:  PAB1507
  Pya:  PAE0683_2
  Sso:  SSO0954_2
  Ape:  APE2281_2
  Sce:  YGR007w YGR202c_2
  Spo:  SPAC15E1.05c SPCC1827.02c
  Ecu:  ECU10g1590 ECU11g0870
  Aae:  aq_1368
  Lla:  L150584 L19816
  Sau:  SA0597
  Lin:  lin1076
  Bsu:  BS_tagD
  Rco:  RC0556
_______

[OU] COG0616 Periplasmic serine proteases (ClpP class)
  Afu:  AF0856
  Hbs:  VNG0620G
  Mac:  MA2409 MA4047
  Mth:  MTH806
  Mja:  MJ0137 MJ0651 MJ1495
  Tac:  Ta0074
  Tvo:  TVN0029
  Pho:  PH0282 PH1569
  Pab:  PAB1960 PAB2437
  Pya:  PAE2794_1 PAE3679_1
  Ape:  APE2212
  Aae:  aq_2080 aq_814
  Tma:  TM0916
  Fnu:  FN0873 FN1271
  Dra:  DR2096
  Cgl:  Cgl1774
  Mtu:  Rv0724
  MtC:  MT0749
  Mle:  ML1839
  Lin:  lin1627
  Bsu:  BS_yteI
  Bha:  BH3198
  Syn:  sll1703 slr0021
  Nos:  all4013 all4590 alr3825
  Eco:  sohB sppA
  EcZ:  Z1886 Z2134 Z2361 ZsohB ZsppA
  Ecs:  ECs1108 ECs1633 ECs1844 ECs2176 ECs2472 ECs2732
  Ype:  YPO2162 YPO2216
  Sty:  STM1295 STM1716 STM2605
  Buc:  BU283
  Vch:  VC1060 VC1994
  Pae:  PA1832 PA2973
  Hin:  HI1541 HI1682
  Pmu:  PM0585 PM0671
  Xfa:  XF2685
  Nme:  NMB1587 NMB2127
  NmA:  NMA0305 NMA1778
  Rso:  RSc0858 RSc1044
  Hpy:  HP1435
  jHp:  jhp1328
  Cje:  Cj0068
  Atu:  AGc1130 AGc588
  Sme:  SMc00857 SMc01135
  Bme:  BMEI1535_2 BMEI1793
  Mlo:  mll7424 mlr3201 mlr4682
  Ccr:  CC0927
  Rpr:  RP398 RP525
  Rco:  RC0545 RC0758
  Ctr:  CT494
  Cpn:  CPn0613
  Tpa:  TP0997
_______

[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase
  Sce:  YER168c
  Spo:  SPAC1093.04c SPCC645.10
  Ecu:  ECU03g1440
  Aae:  aq_2158 aq_411_3
  Tma:  TM0715_3
  Fnu:  FN0243
  Dra:  DR0983 DR1191 DRB0098_1
  Cac:  CAC0311 CAC0753_1 CAC2062 CAC3562
  Cgl:  Cgl3024
  Mtu:  Rv3907c
  MtC:  MT4026
  Mle:  ML2697
  Lla:  L0324
  Spy:  SPy0866
  Spn:  SP1554
  Sau:  SA1290
  Lin:  lin2019
  Bsu:  BS_papS
  Bha:  BH1684 BH2881
  Syn:  sll0825 sll1253_3
  Nos:  all3136 all3989_3
  Eco:  cca pcnB
  EcZ:  Zcca ZpcnB
  Ecs:  ECs0147 ECs3939
  Ype:  YPO0650 YPO3399
  Sty:  STM0184 STM3204
  Buc:  BU061
  Vch:  VC0594 VC2446
  Pae:  PA0584 PA4727
  Hin:  HI0063 HI1606
  Pmu:  PM0247 PM0864
  Xfa:  XF0227 XF1362
  Nme:  NMB0843 NMB1241
  NmA:  NMA1053 NMA1410
  Rso:  RSc0085 RSc2627
  Hpy:  HP0640
  jHp:  jhp0583
  Cje:  Cj0789
  Atu:  AGc4092
  Sme:  SMc02700
  Bme:  BMEI0463
  Mlo:  mll2726
  Ccr:  CC0408
  Rpr:  RP015
  Rco:  RC0015
  Ctr:  CT410 CT704
  Cpn:  CPn0845 CPn0966
  Tpa:  TP0270 TP0596
  Bbu:  BB0706
_______

[R] COG0618 Exopolyphosphatase-related proteins
  Afu:  AF2029_2
  Hbs:  VNG0262C VNG0650C_2 VNG0983C_2 VNG6183C
  Mac:  MA1171_2 MA3851
  Mja:  MJ0988 MJ1633_2
  Mka:  MK0126_2
  Pho:  PH0279_2 PH0534
  Pab:  PAB0174_2 PAB1366
  Pya:  PAE2197
  Ape:  APE1437
  Aae:  aq_1630 aq_411_1
  Tma:  TM0715_1 TM1595
  Fnu:  FN1011
  Dra:  DR0826
  Cac:  CAC1804
  Cgl:  Cgl1937
  Mtu:  Rv2837c
  MtC:  MT2903
  Lla:  L141547
  Spy:  SPy0720
  Spn:  SP1298
  Sau:  SA1526
  Lin:  lin1610
  Bsu:  BS_ytqI
  Bha:  BH3173
  Syn:  sll0639 sll1253_1
  Nos:  all0184 all3989_1
  Vch:  VCA0593
  Tpa:  TP0436 TP0803
  Bbu:  BB0619
  Uur:  UU417
  Mpu:  MYPU_0220 MYPU_6920
  Mpn:  MPN140 MPN549
  Mge:  MG190 MG371
_______

[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters
  Afu:  AF0730 AF1842
  Hbs:  VNG1632G
  Mac:  MA0393 MA0869 MA1419 MA1748 MA3552 MA4019 MA4022
        MA4343
  Mth:  MTH132 MTH1705 MTH453
  Mja:  MJ1089 MJ1571
  Mka:  MK0181
  Pho:  PH0131
  Pab:  PAB2261
  Sso:  SSO1892 SSO2031
  Ape:  APE2155
  Tma:  TM1868
  Fnu:  FN2006
  Dra:  DR2468
  Cac:  CAC0772 CAC1367 CAC3100
  Cgl:  Cgl0520 Cgl1056 Cgl1915 Cgl2771
  Mtu:  Rv2325c
  MtC:  MT2387
  Mle:  ML0849
  Lla:  L125503 L77627
  Spy:  SPy1788 SPy2193
  Spn:  SP0484 SP1437 SP2219
  Sau:  SA0927 SA2019 SA2475
  Lin:  lin1169 lin2748 lin2783
  Bsu:  BS_ybaF BS_ykoC
  Bha:  BH0166
  Syn:  sll0384 slr1978
  Nos:  alr0484 alr3945 alr3948
  EcZ:  Z4269
  Ecs:  ECs3801
  Sty:  STM2021 STM3073
  Hin:  HI1619
  Atu:  AGc1361
  Sme:  SMc00963
  Bme:  BMEI0637
  Uur:  UU537
  Mpu:  MYPU_3880
  Mpn:  MPN195 MPN431
  Mge:  MG181 MG302
_______

[E] COG0620 Methionine synthase II (cobalamin-independent)
  Afu:  AF2112
  Hbs:  VNG1162H
  Mac:  MA0053 MA0054 MA3549
  Mth:  MTH775
  Mja:  MJ1473
  Mka:  MK0667
  Tac:  Ta0977 Ta0978m
  Tvo:  TVN1123 TVN1124
  Pho:  PH1089 PH1090
  Pab:  PAB0608 PAB2361
  Pya:  PAE3655
  Sso:  SSO0406 SSO0407
  Ape:  APE2048 APE2050
  Sce:  YER091c
  Spo:  SPAC9.09
  Aae:  aq_1710
  Tma:  TM1286
  Cgl:  Cgl1115 Cgl2078
  Mtu:  Rv1133c
  MtC:  MT1165
  Mle:  ML0961
  Lla:  L0100 L124252
  Spn:  SP0585
  Sau:  SA0344
  Lin:  lin0838 lin1789
  Bsu:  BS_metC BS_yxjG BS_yxjH
  Bha:  BH0438
  Eco:  metE
  EcZ:  ZmetE
  Ecs:  ECs4759
  Ype:  YPO3788
  Sty:  STM3965
  Buc:  BU030
  Vch:  VC1704
  Pae:  PA1927
  Hin:  HI1702
  Pmu:  PM0420
  Xfa:  XF2272
  Nme:  NMB0944
  NmA:  NMA1140
  Rso:  RSp0676
  Cje:  Cj1201
  Atu:  AGl2018
  Mlo:  mll6123
  Ccr:  CC0482
  Cpn:  CPn0143 CPn0448
_______

[J] COG0621 2-methylthioadenine synthetase
  Afu:  AF1247
  Hbs:  VNG1861C
  Mac:  MA1153
  Mth:  MTH826
  Mja:  MJ0867
  Mka:  MK1081
  Tac:  Ta0256
  Tvo:  TVN1338
  Pho:  PH1875
  Pab:  PAB1134
  Pya:  PAE2939
  Sso:  SSO2380
  Ape:  APE1530
  Aae:  aq_284 aq_474 aq_849
  Tma:  TM0653 TM0830 TM1862
  Fnu:  FN0475 FN1214
  Dra:  DR1150 DRA0189
  Cac:  CAC1286 CAC1813 CAC1838
  Cgl:  Cgl1904
  Mtu:  Rv2733c
  MtC:  MT2803
  Mle:  ML0989
  Sau:  SA1134 SA1405
  Bsu:  BS_ymcB BS_yqeV
  Bha:  BH1351 BH2372
  Syn:  sll0996 slr0082
  Nos:  alr1222 alr1312
  Eco:  yleA yliG
  EcZ:  ZyleA ZyliG
  Ecs:  ECs0699 ECs0915
  Ype:  YPO2620
  Sty:  STM0670 STM0852
  Buc:  BU441
  Vch:  VC0962 VC2620
  Pae:  PA0916 PA3980
  Hin:  HI0019
  Pmu:  PM1001 PM1571
  Xfa:  XF0906
  Nme:  NMB1866
  NmA:  NMA0590
  Rso:  RSc0531 RSc1636
  Hpy:  HP0269 HP0285 HP0734
  jHp:  jhp0254 jhp0270 jhp0671
  Cje:  Cj0458c Cj1006c Cj1454c
  Atu:  AGc4885 AGc623
  Sme:  SMc01115 SMc03855
  Bme:  BMEI0132 BMEI1976 BMEII0703
  Mlo:  mlr0499 mlr4319 mlr5534
  Ccr:  CC3684
  Rpr:  RP416 RP808
  Rco:  RC0580 RC1246
  Cpn:  CPn0251 CPn0477
  Tpa:  TP0269 TP0754
_______

[R] COG0622 Predicted phosphoesterase
  Afu:  AF0799 AF0919 AF2180
  Hbs:  VNG2444C
  Mac:  MA3016 MA4200
  Mth:  MTH1262 MTH1774
  Mja:  MJ0623 MJ0936
  Mka:  MK0092 MK0768
  Pho:  PH1530 PH1746
  Pab:  PAB0209 PAB1944
  Pya:  PAE2565 PAE3577
  Sso:  SSO1605 SSO2531
  Ape:  APE0682
  Sce:  YHR012w_1
  Spo:  SPAC15E1.06
  Tma:  TM0230 TM1076 TM1101
  Fnu:  FN2124
  Cac:  CAC2664 CAC2749
  Mle:  ML2654
  Lla:  L110933
  Spy:  SPy0363
  Spn:  SP1879
  Sau:  SA0999
  Lin:  lin1203
  Bsu:  BS_ysnB
  Bha:  BH3066
  Eco:  yfcE
  EcZ:  ZyfcE
  Ecs:  ECs3184
  Ype:  YPO2780
  Sty:  STM2347
  Vch:  VC0981
  Pae:  PA0351
  Tpa:  TP0937
  Mpu:  MYPU_3020
  Mpn:  MPN126
  Mge:  MG207
_______

[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)
  Aae:  aq_1552
  Dra:  DR1967
  Mtu:  Rv1484
  MtC:  MT1531
  Mle:  ML1806
  Lla:  L161132
  Sau:  SA0869
  Lin:  lin0969
  Bsu:  BS_yjbW
  Bha:  BH2843
  Syn:  slr1051
  Nos:  all4391
  Eco:  fabI
  EcZ:  ZfabI
  Ecs:  ECs1861
  Sty:  STM1700
  Buc:  BU265
  Pae:  PA1806
  Hin:  HI1734
  Pmu:  PM0182
  Nme:  NMB0336
  NmA:  NMA2152
  Rso:  RSc1172
  Hpy:  HP0195
  jHp:  jhp0181
  Cje:  Cj1400c
  Atu:  AGc1374 AGc242
  Sme:  SMc00005 SMc00326
  Bme:  BMEI1512 BMEI1958
  Mlo:  mll5565 mlr7458
  Ccr:  CC3717
  Rpr:  RP365
  Rco:  RC0494
  Ctr:  CT104
  Cpn:  CPn0406
_______

[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
  Afu:  AF0051 AF0522 AF0904
  Mja:  MJ0457 MJ1497
  Mka:  MK0128 MK1581
  Tac:  Ta0934m
  Tvo:  TVN1079
  Pho:  PH0265 PH1153 PH1288 PH1715
  Pab:  PAB0294 PAB0581 PAB0723
  Pya:  PAE2335 PAE2798
  Sso:  SSO0162 SSO0790 SSO1007 SSO1538 SSO2719 SSO2737
  Ape:  APE0632 APE1467 APE1917
  Sce:  YBR281c_2 YFR044c YJL172w
  Spo:  SPAC24C9.08 SPBC1198.08 SPCC757.05c
  Aae:  aq_547
  Tma:  TM0129 TM1666
  Fnu:  FN0278
  Dra:  DR1154 DR1413 DR2017 DR2025 DR2493
  Cac:  CAC2723
  Cgl:  Cgl1085 Cgl2670 Cgl2768
  Mtu:  Rv1202 Rv2141c Rv2522c
  MtC:  MT1240 MT2199 MT2598
  Mle:  ML1059 ML1193 ML1288
  Lla:  L0115 L59867
  Spy:  SPy1070 SPy1542
  Spn:  SP0150 SP0623 SP2153
  Sau:  SA1572 SA1814
  Lin:  lin0289 lin0541 lin1661
  Bsu:  BS_argE BS_ylmB BS_ytjP BS_yurH
  Bha:  BH0352 BH0761 BH1059 BH2678 BH3272 BH3875
  Eco:  argE dapE ygeY ylbB
  EcZ:  ZargE ZdapE ZygeY ZylbB
  Ecs:  ECs0578 ECs3334 ECs3745 ECs4886
  Ype:  YPO3053 YPO3249 YPO3928
  Sty:  STM0527 STM2483 STM4120
  Buc:  BU047 BU095
  Vch:  VC2152 VC2645
  Pae:  PA0444 PA1162 PA2787 PA5206 PA5390
  Hin:  HI0102 HI0588
  Pmu:  PM0160 PM0932 PM1022 PM1117
  Xfa:  XF0116 XF1000
  Nme:  NMB1530
  NmA:  NMA1730
  Rso:  RSc1302 RSc1390 RSc1641 RSc3093 RSc3273 RSp0273 RSp0487
  Hpy:  HP0212
  jHp:  jhp0198
  Cje:  Cj1048c
  Atu:  AGc165 AGc4327 AGc647 AGl2847 AGl3478 AGpA709
  Sme:  SMa1836 SMb21435 SMc01096 SMc01820 SMc02852
  Bme:  BMEI1643 BMEI1827 BMEII0268
  Mlo:  mll1631 mll3297 mll6018 mll7049 mll7658 mlr0967 mlr1185
        mlr4849 mlr7167 mlr7938
  Ccr:  CC0275 CC0736 CC1605 CC2603 CC3239 CC3631
  Rpr:  RP874
  Rco:  RC1347
  Cpn:  CPn0980
_______

[O] COG0625 Glutathione S-transferase
  Sce:  YGR201c YIR038c YKL081w YLL060c YNL229c YPL048w
  Spo:  SPAC29A4.02c SPAC688.04c SPCC1183.02 SPCC191.09c SPCC965.07c
  Spy:  SPy0917
  Spn:  SP1550
  Syn:  sll0067 sll1545 sll1902 slr0236
  Nos:  all1124 all1745 all4902 alr3195 alr3798 alr4570 alr4661
        alr7354
  Eco:  gst sspA yfcF yfcG yghU yibF yliJ
        yncG
  EcZ:  Z2265 Z3391 Z4343 Zgst ZsspA ZyfcF ZyfcG
        ZyibF ZyliJ
  Ecs:  ECs0918 ECs2058 ECs2344 ECs3028 ECs3185 ECs3186 ECs3874
        ECs4102 ECs4469
  Ype:  YPO1314 YPO2367 YPO3561 YPO3639
  Sty:  STM0862 STM1451 STM2176 STM2348 STM2349 STM3140 STM3342
        STM3684 STM4267
  Vch:  VC0576 VC1347 VCA0496 VCA0584 VCA0585
  Pae:  PA0467 PA0473 PA1033 PA1185 PA1466 PA1623 PA1655
        PA1890 PA2007 PA2473 PA2813 PA2821 PA3035 PA3844
        PA3852 PA4401 PA4428
  Hin:  HI0111 HI1441
  Pmu:  PM0522 PM1100 PM1551
  Xfa:  XF0911 XF1210
  Nme:  NMB1953
  NmA:  NMA0498
  Rso:  RSc0086 RSc0129 RSc0384 RSc0607 RSc0817 RSc0984 RSc0992_2
        RSc1085 RSc1768 RSc2012 RSc2021 RSc2594 RSc2721 RSc2926
        RSc3309 RSp1310 RSp1341
  Atu:  AGc1527 AGc1530 AGc2076 AGc2094 AGc2575 AGc3433 AGc503
        AGl2272 AGl2483 AGpA209 AGpA394 AGpA591
  Sme:  SMa1497 SMa2115 SMa2319 SMb20005 SMb20420 SMc00036 SMc00097
        SMc00383 SMc00407 SMc00594 SMc00605 SMc00915 SMc00916 SMc01238
        SMc01443 SMc02390 SMc03206 SMc03882 SMc04141 SMc04321
  Bme:  BMEI0517 BMEI1023 BMEI1125 BMEI1248 BMEI1316 BMEII0256 BMEII0294
  Mlo:  mll0034 mll0063 mll0559 mll1903 mll2536 mll2639 mll3731
        mll3775 mll4614 mll4939 mll7918 mlr0981 mlr1135 mlr1410
        mlr2031 mlr2042 mlr2052 mlr4635 mlr4954 mlr7058 mlr7905
        mlr8180
  Ccr:  CC0147 CC0259 CC0778 CC1124 CC1316 CC1533 CC2085
        CC2088 CC2309 CC2434 CC2484 CC2594 CC2647 CC2843
        CC2901 CC2973 CC3088 CC3568 CC3639
  Rpr:  RP490
  Rco:  RC0782
_______

[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases
  Hbs:  VNG0796G VNG1172G
  Mac:  MA2532
  Tac:  Ta0080 Ta0531
  Tvo:  TVN0174 TVN1007
  Pho:  PH1093
  Pab:  PAB0605
  Pya:  PAE2420
  Sso:  SSO2368
  Ape:  APE1226 APE2068
  Sce:  YAL012w YFR055w YGL184c YHR112c YJR130c YLL058w YML082w
  Spo:  SPAC23A1.14c SPBC15D4.09c SPCC11E10.01
  Tma:  TM1270
  Fnu:  FN1419 FN1745 FN1746
  Dra:  DR0921
  Cac:  CAC0390 CAC0391 CAC0930
  Cgl:  Cgl2392 Cgl2727
  Mtu:  Rv0391 Rv1079
  MtC:  MT0402 MT1110
  Mle:  ML0275 ML2394
  Lla:  L0102 L0181
  Spy:  SPy0172
  Spn:  SP1525
  Sau:  SA0346 SA0347 SA0419
  Lin:  lin1787 lin1788
  Bsu:  BS_yjcI BS_yjcJ BS_yrhB
  Bha:  BH0542 BH0799 BH1627 BH1628 BH1736
  Eco:  metB metC
  EcZ:  ZmetB ZmetC
  Ecs:  ECs3892 ECs4868
  Ype:  YPO0278 YPO0681
  Sty:  STM3161 STM3624A STM4100
  Vch:  VC1671 VC2683
  Pae:  PA0400 PA3107
  Hin:  HI0086 HI0122
  Pmu:  PM0794 PM0995
  Xfa:  XF0864
  Nme:  NMB0802 NMB1609
  NmA:  NMA1012 NMA1808
  Rso:  RSc1639 RSp0781
  Hpy:  HP0106
  jHp:  jhp0098
  Cje:  Cj1393
  Atu:  AGc2902 AGc761 AGl2052 AGl3269
  Sme:  SMc01666 SMc01976 SMc02117 SMc02217 SMc02595
  Bme:  BMEI0103 BMEI1213 BMEI1617
  Mlo:  mll0856 mll1618 mll4503 mll5651 mll8145 mll9139 mlr1566
  Ccr:  CC1424 CC2238 CC3168
_______

[R] COG0627 Predicted esterase
  Sce:  YJL068c
  Cgl:  Cgl0342 Cgl0898 Cgl0942 Cgl1002 Cgl2133 Cgl2815_1 Cgl2817
  Mtu:  Rv0129c Rv1288_2 Rv1639c Rv1886c Rv3803c Rv3804c
  MtC:  MT0137 MT1326_2 MT1677 MT1934 MT3910 MT3911
  Mle:  ML0097 ML0098 ML2028 ML2655
  Lla:  L12887
  Spy:  SPy1022
  Spn:  SP0614
  Sau:  SA2422
  Lin:  lin2527
  Syn:  sll0992
  Nos:  all2808
  Eco:  yaiM yeiG
  EcZ:  ZyaiM ZyeiG
  Ecs:  ECs0410 ECs3046
  Ype:  YPO1501
  Sty:  STM2194
  Pae:  PA3628
  Hin:  HI0184
  Pmu:  PM1451
  Nme:  NMB1305
  NmA:  NMA1519
  Rso:  RSc0604
  Atu:  AGc2723 AGc3637
  Sme:  SMb20171 SMc01273
  Bme:  BMEI1822
  Mlo:  mlr7099
  Ccr:  CC2515
_______

[R] COG0628 Predicted permease
  Afu:  AF1800
  Hbs:  VNG1428G
  Mac:  MA2214 MA2635 MA2646 MA2846 MA2895
  Mth:  MTH1211
  Mja:  MJ1177
  Pho:  PH1000 PH1571
  Pab:  PAB0658 PAB1962
  Aae:  aq_740
  Tma:  TM1187 TM1349
  Fnu:  FN0345
  Dra:  DR0252 DR0898 DR1188
  Cac:  CAC0730 CAC1677 CAC1794 CAC2432
  Cgl:  Cgl2741 Cgl9099
  Mtu:  Rv0205 Rv1101c
  MtC:  MT0215 MT1133
  Lla:  L197809 L66281
  Spy:  SPy1011 SPy1117
  Spn:  SP0873 SP1505
  Sau:  SA0870 SA1192
  Lin:  lin0593 lin0908 lin0948 lin1458
  Bsu:  BS_ydbI BS_yrrI BS_ytvI BS_yubA BS_yueF
  Bha:  BH0463 BH1266 BH2608 BH2921
  Syn:  sll0060 sll0063 sll0462 sll0597 sll1166 slr0784
  Nos:  all0209 all2477 all3163 all5321 alr0242 alr1250 alr2946
        alr4938
  Eco:  perM ydgG ydiK yhhT
  EcZ:  Z2595 Z2716 ZperM ZyhhT
  Ecs:  ECs2307 ECs2395 ECs3355 ECs4323
  Ype:  YPO2408 YPO2450 YPO3068
  Sty:  STM1364 STM1481 STM2493 STM3582
  Buc:  BU123
  Vch:  VC0624 VC2162
  Pae:  PA1007 PA1625 PA2651
  Hin:  HI0237 HI0338
  Pmu:  PM1131 PM2005
  Xfa:  XF0281 XF0589
  Nme:  NMB1219
  NmA:  NMA1381
  Rso:  RSc2624 RSp0411
  Hpy:  HP0567
  jHp:  jhp0514
  Cje:  Cj1363
  Atu:  AGc1646 AGc2113 AGc3191
  Sme:  SMa0136 SMa0447 SMa0665 SMa1676 SMb21335 SMc00616 SMc00793
        SMc02160
  Bme:  BMEI1239 BMEII0806
  Mlo:  mll1810 mll4712 mlr4869 mlr6726 mlr7966 mlr8361
  Ccr:  CC0089 CC2877
  Rpr:  RP630
  Rco:  RC0978
  Tpa:  TP0553
  Bbu:  BB0006
_______

[L] COG0629 Single-stranded DNA-binding protein
  Sce:  YCR028c-a
  Spo:  SPAC2F3.04c
  Aae:  aq_064
  Tma:  TM0604
  Fnu:  FN1304
  Dra:  DR0099 DR0100
  Cac:  CAC0945 CAC1919 CAC2382 CAC3723
  Cgl:  Cgl1814 Cgl2401_1 Cgl2925
  Mtu:  Rv0054 Rv2478c
  MtC:  MT0060 MT2553
  Mle:  ML2684
  Lla:  L0299 L0300 L0301 L0302
  Spy:  SPy1830
  Spn:  SP1540
  Sau:  SA0353 SA1792 SA1899
  Lin:  lin0038 lin0097 lin2402 lin2667
  Bsu:  BS_ssb BS_ywpH
  Bha:  BH4049
  Syn:  slr0925 slr1034
  Nos:  all4779 alr0088 alr7579
  Eco:  ssb
  EcZ:  Z1845 Zssb
  Ecs:  ECs1587 ECs5041
  Ype:  YPO0325
  Sty:  PSLT066 STM4256
  Buc:  BU545
  Vch:  VC0397
  Pae:  PA4232
  Hin:  HI0250
  Pmu:  PM1950
  Xfa:  XF0482 XF1392 XF1558 XF1644 XF1778 XFa0061
  Nme:  NMB1460
  NmA:  NMA1672
  Rso:  RSc0422
  Hpy:  HP1245
  jHp:  jhp1166
  Cje:  Cj1071
  Atu:  AGc2789
  Sme:  SMc01233
  Bme:  BMEI0880
  Mlo:  mll0743 mlr9236_1
  Ccr:  CC1468
  Rpr:  RP836
  Rco:  RC1295
  Ctr:  CT044
  Cpn:  CPn0386
  Tpa:  TP0062 TP0310
  Bbu:  BB0114
  Uur:  UU553
  Mpu:  MYPU_6100
  Mpn:  MPN229
  Mge:  MG091
_______

[NU] COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
  Afu:  AF0338 AF0659 AF0996 AF1049
  Hbs:  VNG0218G VNG0823G VNG0949G
  Mac:  MA0234 MA1299 MA3056 MA3082 MA3096 MA3975
  Mja:  MJ0900 MJ1287 MJ1288
  Tac:  Ta0559 Ta0901 Ta0904
  Tvo:  TVN0613 TVN1012 TVN1015
  Pho:  PH0557 PH0650_3 PH1309
  Pab:  PAB0563 PAB1386 PAB1457_3
  Pya:  PAE0773 PAE2119 PAE2399 PAE2778
  Sso:  SSO0120 SSO2316 SSO2387 SSO2680
  Ape:  APE0695 APE1896 APE2208
  Xfa:  XFa0015
  Hpy:  HP0525 HP1421
  jHp:  jhp0474 jhp1316
  Atu:  AGpAbx65 AGpT14
  Sme:  SMa1302
  Bme:  BMEII0035
  Mlo:  mlr9260
  Ccr:  CC2423
  Rpr:  RP292
  Rco:  RC0390
_______

[T] COG0631 Serine/threonine protein phosphatase
  Tvo:  TVN0703
  Sce:  YBL056w_1 YBR125c YCR079w YDL006w YER089c_1 YHR076w YJL005w_2
        YOR090c_2
  Spo:  SPAC10F6.17c SPAC1556.03 SPAC2G11.07c SPAC4A8.03c SPBC19C7.03_2 SPCC1223.11 SPCC4F11.02
  Aae:  aq_575 aq_933
  Dra:  DR2513 DRA0334_2
  Cac:  CAC0035 CAC0407 CAC1727
  Cgl:  Cgl0045
  Mtu:  Rv0018c_1
  MtC:  MT0021_1
  Mle:  ML0020_1
  Lla:  L140754
  Spy:  SPy1626
  Spn:  SP1733
  Sau:  SA1062
  Lin:  lin1935
  Bsu:  BS_yloO
  Bha:  BH2505
  Syn:  sll0602 sll1033 sll1771
  Nos:  all1731 all2470 alr0547 alr4516
  Pae:  PA0075 PA1670 PA1782_1
  Xfa:  XF2156
  Rso:  RSc2158
  Hpy:  HP0431
  Atu:  AGl1064_2
  Mlo:  mlr2361
  Ctr:  CT259
  Cpn:  CPn0397
  Uur:  UU215
  Mpu:  MYPU_6860
  Mpn:  MPN247
  Mge:  MG108
_______

[L] COG0632 Holliday junction resolvasome, DNA-binding subunit
  Tma:  TM0165
  Fnu:  FN1104
  Dra:  DR1274
  Cac:  CAC2285
  Cgl:  Cgl1621
  Mtu:  Rv2593c
  MtC:  MT2670
  Mle:  ML0482
  Lla:  L0266
  Spy:  SPy2119
  Spn:  SP0179
  Sau:  SA1468
  Lin:  lin1568
  Bsu:  BS_ruvA
  Bha:  BH1224
  Syn:  sll0876
  Nos:  all0375
  Eco:  ruvA
  EcZ:  ZruvA
  Ecs:  ECs2571
  Ype:  YPO2057
  Sty:  STM1895
  Vch:  VC1846
  Pae:  PA0966
  Hin:  HI0313
  Pmu:  PM0977
  Xfa:  XF1904
  Nme:  NMB0265
  NmA:  NMA2221
  Rso:  RSc0501
  Hpy:  HP0883
  jHp:  jhp0815
  Cje:  Cj0799c
  Atu:  AGl2223
  Sme:  SMc03966
  Bme:  BMEI0333
  Mlo:  mll3898
  Ccr:  CC3237
  Rpr:  RP385
  Rco:  RC0531
  Ctr:  CT501
  Cpn:  CPn0620
  Tpa:  TP0543
  Bbu:  BB0023
  Uur:  UU449
  Mpu:  MYPU_6570
  Mpn:  MPN535
  Mge:  MG358
_______

[C] COG0633 Ferredoxin
  Hbs:  VNG0438G VNG2132Gm_2 VNG2293G VNG2555C
  Sce:  YPL252c
  Spo:  SPAC22E12.10c_2
  Ecu:  ECU07g0600
  Aae:  aq_919a
  Dra:  DR2075
  Cgl:  Cgl0206 Cgl0535
  Syn:  sll1161_1 sll1382 slr0148 slr0150 slr1828 ssl0020 ssl2559
        ssl3044 ssr1041
  Nos:  all1430 all2919 all3521 all4148 alr0784 asl0884 asr2378
  Eco:  fdx ycbX_2 yfaE
  EcZ:  Z1297_2 Zfdx ZyfaE
  Ecs:  ECs1031_2 ECs3119 ECs3391
  Ype:  YPO1212 YPO1417_2 YPO2891
  Sty:  STM1060_2 STM2279 STM2538
  Buc:  BU177 BU606
  Vch:  VC0311 VC0753 VC1254
  Pae:  PA3809
  Hin:  HI0372 HI1309
  Pmu:  PM0323 PM0720
  Nme:  NMB1134 NMB1172 NMB1287
  NmA:  NMA1344 NMA1497
  Rso:  RSc1025
  Atu:  AGc2495 AGc4673_1
  Sme:  SMc00192 SMc01818_1
  Bme:  BMEI0959
  Mlo:  msl0793
  Ccr:  CC3524
  Rpr:  RP199
  Rco:  RC0261
  Ctr:  CT059
  Cpn:  CPn0364
_______

[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase
  Aae:  aq_544
  Tma:  TM0206
  Fnu:  FN0288
  Dra:  DR1376
  Cac:  CAC3203
  Cgl:  Cgl2641
  Mtu:  Rv3624c
  MtC:  MT3726
  Mle:  ML0214
  Lla:  L160442 L25115
  Spn:  SP0012
  Sau:  SA0468
  Lin:  lin0251_2
  Bsu:  BS_hprT
  Bha:  BH0084
  Eco:  hpt
  EcZ:  Zhpt
  Ecs:  ECs0129
  Ype:  YPO3408
  Sty:  STM0170
  Buc:  BU195
  Vch:  VC0585
  Pae:  PA4645
  Hin:  HI1153
  Pmu:  PM0121
  Xfa:  XF2354
  Nme:  NMB2047
  NmA:  NMA0389
  Rso:  RSc2812
  Atu:  AGl2446
  Sme:  SMc00719
  Bme:  BMEI0082
  Mlo:  mll3520
  Ccr:  CC2214
  Uur:  UU104
  Mpu:  MYPU_5510
  Mpn:  MPN672
  Mge:  MG458
_______

[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
  Aae:  aq_1424 aq_2124
  Tma:  TM1166
  Fnu:  FN0560 FN0771 FN1612
  Dra:  DR0130
  Cac:  CAC1279 CAC2271
  Cgl:  Cgl2240
  Mtu:  Rv2388c
  MtC:  MT2457
  Lla:  L0193
  Spy:  SPy1040
  Spn:  SP1409
  Sau:  SA1412
  Lin:  lin1513
  Bsu:  BS_hemN BS_hemZ
  Bha:  BH1152 BH1343
  Syn:  sll1876 sll1917
  Nos:  all4956 alr3126
  Eco:  hemN yggW
  EcZ:  ZchuW ZhemN ZyggW
  Ecs:  ECs3831 ECs4383 ECs4789
  Ype:  YPO0021 YPO0286 YPO0946
  Sty:  STM3104 STM4004 STM4012
  Buc:  BU550
  Vch:  VC0116 VC0455 VCA0909
  Pae:  PA0386 PA1546
  Hin:  HI0463
  Pmu:  PM1669 PM1833
  Xfa:  XF1507
  Nme:  NMB0379 NMB0665
  NmA:  NMA0864 NMA2108
  Rso:  RSc2161 RSc3284
  Hpy:  HP0665 HP1226
  jHp:  jhp0610 jhp1147
  Cje:  Cj0363c Cj0580c Cj0992c
  Atu:  AGc2945 AGc568
  Sme:  SMa1266 SMc01147
  Bme:  BMEI1293 BMEI1771 BMEII0096
  Mlo:  mll5815 mll6408 mlr4627 mlr6390 mlr6633
  Ccr:  CC0145 CC1411
  Rpr:  RP175
  Rco:  RC0219
  Ctr:  CT052 CT746
  Cpn:  CPn0380 CPn0889
  Tpa:  TP0186
  Bbu:  BB0656
  Uur:  UU274
_______

[C] COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K
  Afu:  AF1160 AF1162
  Hbs:  VNG2143G
  Mac:  MA2436 MA4154
  Mth:  MTH959
  Mja:  MJ0221
  Mka:  MK1013
  Tac:  Ta0001z
  Tvo:  TVN0048
  Pho:  PH1980
  Pab:  PAB1181
  Sso:  SSO0567
  Ape:  APE2326
  Sce:  Q0130 YEL027w YHR026w YPL234c
  Spo:  SPAC1B3.14 SPAC2C4.13 SPAC732.01
  Ecu:  ECU06g0190 ECU07g1350
  Aae:  aq_177
  Tma:  TM1615
  Fnu:  FN0363 FN1740
  Dra:  DR0696
  Cac:  CAC2870
  Cgl:  Cgl1180
  Mtu:  Rv1305
  MtC:  MT1345
  Mle:  ML1140
  Lla:  L11729a
  Spy:  SPy0149 SPy0754
  Spn:  SP1321 SP1514
  Sau:  SA1910
  Lin:  lin0134 lin2678
  Bsu:  BS_atpE
  Bha:  BH3759
  Syn:  ssl2615
  Nos:  asl0009
  Eco:  atpE
  EcZ:  ZatpE
  Ecs:  ECs4679
  Ype:  YPO4126
  Sty:  STM3870
  Buc:  BU003
  Vch:  VC2769
  Pae:  PA5559
  Hin:  HI0484
  Pmu:  PM1489
  Xfa:  XF1148
  Nme:  NMB1939
  NmA:  NMA0514
  Rso:  RSc3322
  Hpy:  HP1212
  jHp:  jhp1135
  Cje:  Cj0936
  Atu:  AGc1297
  Sme:  SMc00870
  Bme:  BMEI1545
  Mlo:  msr7412
  Ccr:  CC0367
  Rpr:  RP022
  Rco:  RC0026
  Ctr:  CT304
  Cpn:  CPn0092
  Tpa:  TP0430
  Bbu:  BB0090
  Uur:  UU136
  Mpu:  MYPU_2710
  Mpn:  MPN603
  Mge:  MG404
_______

[R] COG0637 Predicted phosphatase/phosphohexomutase
  Mac:  MA0451 MA3875
  Tac:  Ta0845
  Tvo:  TVN0942
  Pho:  PH0749
  Pya:  PAE3068
  Sso:  SSO0481
  Sce:  YER062c YHR043c YHR044c YIL053w YKL033w-a
  Spo:  SPAC4C5.01 SPCC1020.07
  Tma:  TM1254
  Dra:  DR1622 DR2613
  Cac:  CAC0153 CAC0632 CAC0855 CAC2614 CAC3231
  Cgl:  Cgl1470
  Mtu:  Rv2006_1 Rv3372_1 Rv3400
  MtC:  MT2062_1 MT3482_1 MT3508
  Mle:  ML0393 ML0414_1
  Lla:  L0001 L150333
  Spy:  SPy0640
  Sau:  SA2111
  Lin:  lin2355 lin2930 lin2964
  Bsu:  BS_yhcW BS_yvdM
  Bha:  BH3864
  Syn:  sll1138
  Nos:  all1058_2 alr0288 alr0728 alr3528
  Eco:  ycjU yfbT yieH yniC yqaB
  EcZ:  Z2756 ZycjU ZyfbT ZyieH ZyqaB
  Ecs:  ECs1896 ECs2433 ECs3177 ECs3552 ECs4652
  Ype:  YPO2446 YPO2562 YPO3303 YPO4108
  Sty:  STM0432 STM1322 STM2334 STM2820 STM3852
  Vch:  VCA0102 VCA0606 VCA0662 VCA0798
  Pae:  PA0562 PA1311 PA2067 PA2803
  Hin:  HI0488
  Pmu:  PM1057 PM1965 PM1966
  Xfa:  XF1201
  Nme:  NMB0391
  NmA:  NMA2093 NMA2097
  Rso:  RSc0271 RSc2141
  Atu:  AGc1388 AGc1445 AGl3128 AGl828
  Sme:  SMb21214 SMc00079 SMc01502
  Bme:  BMEI1105 BMEI1446 BMEII0327
  Mlo:  mll4919 mll5344 mll7519 mlr3618 mlr4094 mlr4932 msr3621
  Ccr:  CC2096
  Ctr:  CT464
  Cpn:  CPn0581
  Mpu:  MYPU_6350
_______

[O] COG0638 20S proteasome, alpha and beta subunits
  Afu:  AF0481 AF0490
  Hbs:  VNG0166G VNG0880G
  Mac:  MA1779 MA3873
  Mth:  MTH1202 MTH686
  Mja:  MJ0591 MJ1237
  Mka:  MK0385 MK1228
  Tac:  Ta0612 Ta1288
  Tvo:  TVN0304 TVN0663
  Pho:  PH0245 PH1402 PH1553
  Pab:  PAB0417 PAB1867 PAB2199
  Pya:  PAE0807 PAE2215 PAE3595
  Sso:  SSO0278 SSO0738 SSO0766
  Ape:  APE0507 APE0521 APE1449
  Sce:  YBL041w YER012w YER094c YFR050c YGL011c YGR135w YGR253c
        YJL001w YML092c YMR314w YOL038w YOR157c YOR362c YPR103w
  Spo:  SPAC22D3.07 SPAC22F8.06 SPAC31A2.04c SPAC31A2.17c SPAC323.02c SPAC4A8.13c SPAC6G10.04c
        SPBC106.16 SPBC4C3.10c SPBC577.10 SPBC646.16 SPCC1442.06 SPCC1795.04c SPCC63.12c
  Ecu:  ECU02g0340 ECU05g0290 ECU05g1340 ECU05g1400 ECU07g1040 ECU07g1420 ECU08g0280
        ECU08g1580 ECU08g1870 ECU09g0330 ECU09g0720 ECU10g0550 ECU10g1450 ECU11g1670
  Mtu:  Rv2109c Rv2110c
  MtC:  MT2169 MT2170
  Mle:  ML1322 ML1323
_______

[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
  Afu:  AF1822 AF1953
  Hbs:  VNG2372G
  Mac:  MA3259 MA4202
  Mja:  MJ0912
  Mka:  MK0804
  Tac:  Ta0989
  Tvo:  TVN1195
  Pho:  PH1004 PH1616
  Pab:  PAB1723 PAB1999
  Pya:  PAE2004
  Sso:  SSO1090
  Ape:  APE0777 APE1169 APES047
  Sce:  YDL047w YDL134c YDL188c YDR075w YDR436w YER133w YGR123c_2
        YLR433c_1 YML016c YML057w YNL217w YNR032w YPL179w
  Spo:  SPAC22H10.04 SPAC57A7.08 SPAC823.15 SPBC1346.01c SPBC16H5.07c SPBC26H8.05c SPBC3F6.01c_2
        SPBC776.02c SPCC1739.12 SPCC1840.07c SPCC31H12.05c
  Ecu:  ECU04g0700 ECU05g0440 ECU09g0980 ECU10g1280 ECU11g0660
  Tma:  TM0742 TM1876
  Fnu:  FN1603_2
  Dra:  DR0295 DR0761 DR0935 DR1260 DR1360 DR2233 DR2249_2
        DR2331 DRA0124
  Cac:  CAC2787
  Lla:  L126240
  Spn:  SP0619 SP1201 SP1637
  Lin:  lin0658
  Bsu:  BS_yjbP
  Bha:  BH1859 BH2845
  Syn:  sll1387
  Nos:  all0373 alr1198 alr1199 alr3731_2 alr4370
  Eco:  apaH pphA pphB
  EcZ:  Z0954 Z3933 ZapaH ZpphA ZpphB
  Ecs:  ECs0054 ECs0813 ECs2548 ECs3502 ECs3590
  Ype:  YPO0490
  Sty:  STM0088 STM1853 STM2907
  Buc:  BU142
  Vch:  VC0441
  Pae:  PA0590 PA3087
  Hin:  HI0551 HI0762
  Pmu:  PM1210 PM1388
  Xfa:  XF2150
  Nme:  NMB0661_1
  NmA:  NMA0860
  Rso:  RSc0681
  Cje:  Cj0184c_2
  Atu:  AGc4222 AGl2581
  Sme:  SMb21213 SMc01798
  Mlo:  mll6908 mlr2514 mlr6579
  Ccr:  CC0168
_______

[K] COG0640 Predicted transcriptional regulators
  Afu:  AF1264 AF1270 AF1544 AF1697 AF1853 AF1869 AF1987
        AF2136
  Hbs:  VNG0293H VNG0511H VNG0591C VNG0703H VNG0943C VNG1096H VNG1438H
        VNG1490H VNG2414H VNG2445C VNG2614H VNG6287H VNG7122 VNG7125
  Mac:  MA0207 MA0342 MA0504 MA0723 MA0750 MA1458_1 MA2544
        MA2921 MA3597 MA3784 MA3924_1 MA3925_1 MA3940 MA3952
        MA4076 MA4344 MA4479 MA4480 MA4484
  Mth:  MTH107 MTH1349_1 MTH1438 MTH1795 MTH517 MTH864 MTH899
  Mja:  MJ0229 MJ0379 MJ0774_2 MJ1325 MJ1553
  Mka:  MK0136 MK0542_1 MK1102 MK1261 MK1515
  Tac:  Ta0115 Ta0185 Ta0242a Ta1110 Ta1173 Ta1443
  Tvo:  TVN0192 TVN1251 TVN1347 TVN1408
  Pho:  PH0062 PH0885 PH0915 PH0952_1 PH1101 PH1406_2 PH1930
        PH1932
  Pab:  PAB0625 PAB0751 PAB1227 PAB1229 PAB1691 PAB1869_2 PAB2298
        PAB2328
  Pya:  PAE0202 PAE0305 PAE0385 PAE0738 PAE1103 PAE1612 PAE1848
        PAE1948_2 PAE2042 PAE2186 PAE2911 PAE3116_2 PAE3387
  Sso:  SSO0200 SSO0620 SSO1444 SSO1445 SSO2688 SSO9953
  Ape:  APE0152a APE0290 APE0293 APE1237 APE1603a APE2413 APE2505
  Aae:  aq_1387
  Tma:  TM0978_1 TM0998 TM1176
  Fnu:  FN0260
  Dra:  DR0233 DR1613 DRA0071
  Cac:  CAC2242 CAP0031 CAP0103
  Cgl:  Cgl0262 Cgl0440 Cgl0847 Cgl0882 Cgl1587 Cgl2227 Cgl2362
        Cgl2723 Cgl2985
  Mtu:  Rv0081 Rv0324_1 Rv0576_1 Rv0827c Rv1674c_1 Rv1994c Rv2034
        Rv2358 Rv2640c Rv2642 Rv3744
  MtC:  MT0088 MT0339_1 MT0605_1 MT0849 MT1712_1 MT2050 MT2094
        MT2427 MT2718 MT3852
  Mle:  ML0825
  Lla:  L0249 L133446
  Spy:  SPy2163
  Sau:  SA1591 SA1947 SAP006 SAP016
  Lin:  lin0149 lin2636 pli0034 pli0036 pli0060
  Bsu:  BS_yceK BS_yczG BS_ydeT BS_ydfF BS_yozA BS_yqcJ BS_yvbA
  Bha:  BH0292 BH0391 BH0677_1 BH0694 BH0945 BH2086 BH2996
        BH3000 BH3212 BH3887 BH4037
  Syn:  sll0792 sll1957
  Nos:  all1103 all3743 all3903 all5056 alr0831 alr1044_1 alr1867
        alr2766 alr7621
  Eco:  arsR ygaV
  EcZ:  Z3966 ZarsR
  Ecs:  ECs3528 ECs4373
  Ype:  YPO1849 YPO3346
  Sty:  STM2797
  Vch:  VC0678 VC1068 VCA0642
  Pae:  PA0279 PA0547_1 PA2277 PA4354
  Pmu:  PM1481
  Xfa:  XF0767 XF1617_1
  Nme:  NMB0398
  NmA:  NMA2087
  Rso:  RSc0993 RSc1543 RSc1960 RSp1129 RSp1318 RSp1349
  Cje:  Cj1561
  Atu:  AGc2461 AGc2752 AGc3675 AGc3686 AGc3852_1 AGc3976 AGc4139
        AGl2725 AGl3580 AGpA250 AGpA461
  Sme:  SMa0193 SMa1056 SMb20608 SMb21008 SMb21169 SMb21576 SMc00080
        SMc01226 SMc01762 SMc01842_1 SMc02639 SMc02647 SMc03843 SMc03998
        SMc04162 SMc04220
  Bme:  BMEI0150 BMEI0430 BMEI0558_1 BMEII0393 BMEII0810
  Mlo:  mll1589_1 mll2166 mll2170 mll2255 mll3509 mll3559 mll3772
        mll3947 mll4689 mll5360 mll5668 mlr0745 mlr2159 mlr2173
        mlr2511 mlr2806 mlr4409 mlr4605 mlr7816 mlr8182 mlr8555
        msl2212 msr3770
  Ccr:  CC0157 CC1280 CC1505 CC2141_1 CC2864 CC3028 CC3070
_______

[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
  Afu:  AF2204
  Mac:  MA2647 MA3317
  Mth:  MTH113 MTH114
  Mja:  MJ0907
  Sso:  SSO1552 SSO1566
  Tma:  TM1301 TM1317 TM1324 TM1325
  Cac:  CAC0658 CAC2279
  Syn:  sll1766
  Nos:  all2127
  Eco:  aslB ydeM yidF
  EcZ:  Z2211 ZaslB ZyidF
  Ecs:  ECs2102 ECs4615 ECs4730
  Ype:  YPO0841 YPO1496 YPO3046
  Sty:  STM0036 STM1287 STM3123 STM3803 STM3966
  Hin:  HI0805
  Pmu:  PM0600 PM1678
  Sme:  SMc03767
_______

[T] COG0642 Signal transduction histidine kinase
  Afu:  AF0021_2 AF0208 AF0277_3 AF0410_2 AF0448_4 AF0450_2 AF0454_2
        AF0579_2 AF0770_2 AF0893_2 AF1035_2 AF1046 AF1184_2 AF1452_2
        AF1467 AF1472_4 AF1483_5 AF1515_2 AF1639_2 AF1721_2 AF1766_3
        AF2032_2 AF2109_2 AF2420_3
  Hbs:  VNG0716G_3 VNG0736G_2 VNG0916G_2 VNG1175G_3 VNG1193C VNG1234C VNG1374G_2
        VNG1375C VNG2037C_2 VNG2180C VNG2334C_6 VNG6035G_3 VNG7030_3
  Mac:  MA0777 MA0863_4 MA1149_2 MA1270_4 MA1739_4 MA1957_2 MA2013_2
        MA2256_2 MA2294_2 MA2348_2 MA2553_2 MA2555_4 MA3368_2 MA3405_3
        MA3962 MA4377_3 MA4561_5
  Mth:  MTH444
  Sce:  YGL059w YIL042c YIL147c_1
  Spo:  SPAC1834.08_3 SPAC27E2.09_5 SPAC644.11c SPCC74.06_5
  Aae:  aq_1115_3 aq_231_2 aq_316
  Tma:  TM0127 TM0187 TM0400 TM0853 TM1258 TM1359_4 TM1654_2
        TM1665
  Fnu:  FN0066 FN0586 FN0942 FN1260
  Dra:  DR0744 DR0860 DR0892 DR1174_4 DR1175_2 DR1606 DR2328
        DR2416 DR2419_2 DRA0205_2 DRB0028_2 DRB0029_2 DRB0082 DRB0090
  Cac:  CAC0225 CAC0290 CAC0317 CAC0323 CAC0372 CAC0437 CAC0451
        CAC0525 CAC0565 CAC0654 CAC0831 CAC0863 CAC0903_3 CAC1507
        CAC1517 CAC1553 CAC1701 CAC2434 CAC2730 CAC2760 CAC3219
        CAC3319_2 CAC3391 CAC3516 CAC3662
  Cgl:  Cgl0274 Cgl0398 Cgl0732 Cgl0851 Cgl2555 Cgl2610 Cgl2903
  Mtu:  Rv0490 Rv0600c Rv0601c Rv0758 Rv0902c Rv0982 Rv1032c
        Rv3245c Rv3365c Rv3764c
  MtC:  MT0509 MT0630 MT0783 MT0925 MT1010 MT1061 MT3343
        MT3474 MT3871
  Mle:  ML0175 ML0774 ML2124 ML2440
  Lla:  L0122 L0128 L0130 L0132 L0134
  Spy:  SPy0337 SPy0875 SPy1082 SPy1236 SPy2026
  Spn:  SP0084 SP0604 SP0799 SP1632 SP2083 SP2192
  Sau:  SA0615 SA0660 SA1246 SA1322 SA1515 SA2152 SA2417
  Lin:  lin1415 lin1543 lin1852 lin2061 lin2515 lin2643 lin2727
  Bsu:  BS_kinA_3 BS_kinB BS_kinC_2 BS_phoR_3 BS_resE_4 BS_ybdK BS_ycbA
        BS_ycbM BS_yclK BS_ykoH BS_ykrQ_3 BS_ykvD BS_yrkQ BS_ytsB
        BS_yvcQ BS_yvqB BS_yvrG BS_yxdK
  Bha:  BH0272 BH0289 BH0373 BH0536_2 BH0754 BH0819 BH1154_2
        BH1173 BH1388 BH1547_1 BH1581 BH1802 BH1809 BH1920
        BH1945 BH2013_1 BH2263 BH2700 BH2716 BH2949_3 BH3156
        BH3425 BH3477 BH3912
  Syn:  sll0094 sll0337 sll0474_2 sll0698 sll0750 sll0790 sll0798
        sll1003_3 sll1124_5 sll1228_2 sll1229_2 sll1334_2 sll1353_2 sll1475
        sll1555_2 sll1590 sll1672_2 sll1871_2 sll1888_2 sll1905_3 slr0210
        slr0222_3 slr0484_3 slr0533 slr0640 slr1147_2 slr1285 slr1324_2
        slr1393_3 slr1400_2 slr1414 slr1759_4 slr1805_3 slr1969_3 slr1983_1
        slr2098_3 slr2099_2 slr2104_3
  Nos:  all0182_2 all0323_4 all0330_3 all0542_3 all0637_2 all0638_1 all0707
        all0729_7 all0824_2 all0825_2 all0853_2 all0886_4 all0978_3 all1088_2
        all1145_3 all1177_2 all1178_2 all1191_2 all1279_3 all1388_2 all1389_1
        all1625_4 all1639_1 all1688_2 all1716_5 all1804_4 all1846_3 all1914_3
        all2094_3 all2281_2 all2282_4 all2379_3 all2699_2 all2772 all2875_4
        all2883_1 all2897_3 all2956 all3167 all3275_3 all3359 all3557_4
        all3563_2 all3564_2 all3587 all3600 all3691_4 all3764_2 all3765_2
        all3767_2 all3985_2 all4096_2 all4097_3 all4261_2 all4496 all4502
        all4687_4 all4726 all4963_3 all5074_2 all5173_2 all5210_5 all5308_2
        all5309_2 all5327_2 all7218 all7583 all7605 alr0117 alr0354_4
        alr0428_2 alr0546_2 alr0642 alr0709_4 alr0710_4 alr0900_4 alr1121_3
        alr1171 alr1192 alr1229_5 alr1231_2 alr1285_1 alr1308_2 alr1551
        alr1665 alr1680 alr1883_4 alr1966_4 alr1968_3 alr2123_2 alr2241_2
        alr2258_4 alr2279_3 alr2307_2 alr2428_7 alr2481_2 alr2572 alr2682_5
        alr2739 alr3037 alr3092_2 alr3120_5 alr3121_2 alr3155 alr3159_2
        alr3225_2 alr3442_2 alr3511 alr3547 alr3671_2 alr3761_5 alr3982_2
        alr4105 alr4586 alr4716_2 alr4878_1 alr4879_2 alr4880_2 alr4882
        alr4905 alr5189 alr5272_3
  Eco:  arcB_1 atoS_3 baeS barA_1 basS cpxA creC
        envZ evgS_2 hydH phoQ phoR rcsC_1 rstB
        torS_1 ybcZ yedV yfhK ygiY yojN_1
  EcZ:  Z5692_1 ZarcB_1 ZbaeS ZbarA_1 ZbasS ZcpxA ZcreC
        ZenvZ ZevgS_2 ZhydH ZphoQ ZphoR ZrcsC_1 ZrstB
        ZtorS_1 ZybcZ ZyedV ZyfhK ZygiY ZyojN_1
  Ecs:  ECs0450 ECs0608 ECs1148_1 ECs1601 ECs2315 ECs2706 ECs2886
        ECs3105_1 ECs3107_1 ECs3249_2 ECs3422 ECs3646_1 ECs3908 ECs3909
        ECs4089_1 ECs4246 ECs4837 ECs4926 ECs5074_1 ECs5094 ECs5357
  Ype:  YPO0073 YPO0137 YPO0256_1 YPO0895 YPO1217_1 YPO1633 YPO2000
        YPO2309 YPO2916 YPO2997 YPO3008 YPO3204 YPO3381_1 YPO3508
        YPO3555_1 YPO3965_1
  Sty:  STM0398 STM0561 STM1095 STM1230 STM1386 STM1392_1 STM1471
        STM2130 STM2269_1 STM2271_1 STM2564 STM2784 STM2958_1 STM3178
        STM3328_1 STM3501 STM3826_1 STM4058 STM4173 STM4291 STM4589
  Vch:  VC0303_2 VC0622_1 VC0720 VC1084 VC1085 VC1088 VC1156
        VC1315 VC1319 VC1349_3 VC1445_1 VC1521 VC1639 VC1653_2
        VC1831_1 VC2136 VC2369_1 VC2453_1 VC2693 VC2713 VCA0211
        VCA0238 VCA0257 VCA0522_1 VCA0565 VCA0709_1 VCA0719 VCA0736_1
  Pae:  PA0464 PA0757 PA0928_1 PA0930 PA1098_2 PA1158 PA1180
        PA1243_4 PA1396_2 PA1438 PA1611_1 PA1798 PA1976_2 PA1992_2
        PA2177_2 PA2480 PA2524 PA2571 PA2583_2 PA2656 PA2687
        PA2810 PA2824_2 PA2882 PA3044_3 PA3078 PA3191 PA3206
        PA3271_3 PA3462_2 PA3946_3 PA3974_2 PA4036_3 PA4102 PA4112_3
        PA4197_3 PA4293_2 PA4380 PA4398 PA4494 PA4546 PA4725_2
        PA4777 PA4856_2 PA4886 PA4982_1 PA5199 PA5361 PA5484
  Hin:  HI0219b HI1378 HI1707
  Pmu:  PM0215 PM0313_1 PM0431 PM0724 PM1380_1 PM1888
  Xfa:  XF0323 XF0390 XF0399 XF0400 XF0853_2 XF0973_1 XF1114_1
        XF1330_2 XF1455_2 XF2535 XF2546 XF2577 XF2592
  Nme:  NMB0594 NMB1606 NMB1792
  NmA:  NMA0670 NMA0797 NMA1803
  Rso:  RSc0039 RSc0549 RSc1075_3 RSc1535 RSc1598_2 RSc1647 RSc1735
        RSc2456_1 RSc2736 RSc2737_2 RSc2808 RSc2923 RSc2936 RSc3063
        RSc3079_2 RSc3403 RSp0220 RSp0315 RSp0488 RSp0524 RSp0654
        RSp1043 RSp1162 RSp1178 RSp1195 RSp1441 RSp1454 RSp1553
        RSp1622_1 RSp1676_2
  Hpy:  HP0164 HP0244 HP1364
  jHp:  jhp0151 jhp0229 jhp1282
  Cje:  Cj0793 Cj0889c Cj1222c Cj1226c Cj1262 Cj1492c_2
  Atu:  AGc1094_2 AGc1116 AGc1677 AGc1780 AGc1794 AGc1799_2 AGc2063
        AGc2521_2 AGc3465 AGc3614_2 AGc4011 AGc4237_2 AGc4388_2 AGc4477
        AGc44_2 AGc4606 AGc52 AGc598_2 AGc680 AGc736 AGc85
        AGc932_2 AGl1117_2 AGl153gl_1 AGl1617_2 AGl1672 AGl203 AGl2107
        AGl216 AGl341 AGl489 AGpA241 AGpA749 AGpA755_2 AGpT2_1
  Sme:  SMa0939 SMa1142_2 SMa1229_2 SMa1684 SMb20164 SMb20218 SMb20356_1
        SMb20358_1 SMb20609_2 SMb20721 SMb20868_3 SMb21209 SMb21560 SMb21574
        SMc00059 SMc00129 SMc00471_2 SMc00776_2 SMc01128_2 SMc01595 SMc01716
        SMc02147 SMc02249_2 SMc02367 SMc02369_2 SMc02585 SMc02756_2 SMc04212
        SMc04446
  Bme:  BMEI0417_2 BMEI0492 BMEI0947_2 BMEI1325_2 BMEI1328 BMEI1336 BMEI1357
        BMEI1606_2 BMEI1624 BMEI1648 BMEI1816 BMEI2027_2 BMEI2035 BMEII0052
        BMEII0792 BMEII1015
  Mlo:  mll0767_2 mll0976 mll0984_3 mll0989_2 mll0997 mll2384_2 mll2385_3
        mll3725_2 mll4418 mll4698_2 mll4807 mll5087_2 mll5094 mll5372
        mll5673 mll5691_2 mll5777 mll6540_2 mll6607_2 mll7700 mll7952
        mll8067_5 mlr0562 mlr1132_1 mlr1336 mlr2667 mlr2741 mlr3215_2
        mlr3659_3 mlr3786_1 mlr4459 mlr5307 mlr5642 mlr5737_2 mlr6618
        mlr6689_2 mlr6852 mlr7649 mlr7686 mlr7697
  Ccr:  CC0026_2 CC0138_1 CC0238 CC0248 CC0289 CC0530 CC0586_2
        CC0652_2 CC0723_1 CC0759_2 CC0921_1 CC0934_1 CC1062 CC1063
        CC1078_1 CC1181 CC1294 CC1305 CC1705_1 CC1768 CC2324_1
        CC2482_3 CC2501_1 CC2521_1 CC2632_1 CC2670_3 CC2755 CC2765
        CC2852_1 CC2874_2 CC2884 CC2932 CC2971_3 CC2988_1 CC2993_1
        CC3075_1 CC3102_1 CC3162_1 CC3191_2 CC3219_1 CC3225_2 CC3327_3
        CC3484_2 CC3623_1
  Rpr:  RP229 RP426 RP465_2
  Rco:  RC0311 RC0592 RC0703 RC0704
  Ctr:  CT467_2
  Cpn:  CPn0584_2
  Bbu:  BB0420_2 BB0764_2
_______

[NT] COG0643 Chemotaxis protein histidine kinase and related kinases
  Afu:  AF1040
  Hbs:  VNG0971G
  Mac:  MA0014 MA3066
  Pho:  PH0484
  Pab:  PAB1332
  Tma:  TM0702
  Dra:  DRA0355_1
  Cac:  CAC0118 CAC2220
  Lin:  lin0700
  Bsu:  BS_cheA
  Bha:  BH2970
  Syn:  sll0043_3 sll1296_1 slr0322_1
  Nos:  all0926_1 all1068_1 all2161_1
  Eco:  cheA
  EcZ:  ZcheA
  Ecs:  ECs2598
  Ype:  YPO1666
  Sty:  STM1921
  Vch:  VC1397 VC2063 VCA1095
  Pae:  PA0178 PA0413_2 PA1458 PA3704_1
  Xfa:  XF1952_2
  Rso:  RSc0672_2 RSp1408
  Hpy:  HP0392_1
  jHp:  jhp0989_1
  Cje:  Cj0284c_1
  Atu:  AGc912
  Sme:  SMa1558_1 SMc03007
  Mlo:  mll9511_1
  Ccr:  CC0433 CC0594
  Tpa:  TP0363
  Bbu:  BB0567 BB0669
_______

[C] COG0644 Dehydrogenases (flavoproteins)
  Afu:  AF0464 AF0648 AF1023 AF1637
  Hbs:  VNG0439C VNG0468C VNG1198C VNG2638G
  Mac:  MA0691 MA0692 MA0747 MA1484 MA2751 MA2893 MA3894
        MA4421
  Mth:  MTH1718 MTH277 MTH725
  Mja:  MJ0532 MJ1182 MJ1520
  Mka:  MK1443 MK1645
  Tac:  Ta0326 Ta0516m Ta0983 Ta1495
  Tvo:  TVN0993 TVN1278 TVN1495
  Pho:  PH0181 PH0356
  Pab:  PAB0109 PAB1059
  Pya:  PAE0634 PAE0725 PAE1519 PAE2159 PAE2989
  Sso:  SSO0584 SSO0898 SSO2348 SSO2353 SSO2776 SSO2819
  Ape:  APE0201 APE0759 APE1622 APE1952 APE2421
  Sce:  YOR356w
  Spo:  SPAC20G8.04c
  Aae:  aq_104 aq_121
  Tma:  TM1532
  Fnu:  FN1544
  Cac:  CAP0013
  Cgl:  Cgl0465
  Mtu:  Rv0561c Rv1138c
  MtC:  MT0587 MT1171
  Mle:  ML2276
  Syn:  sll1091 slr1998
  Nos:  alr0128 alr1209
  Eco:  fixC ydiS ygcN yidS
  EcZ:  ZfixC ZydiS ZygcN ZyidS
  Ecs:  ECs0046 ECs2406 ECs3621 ECs4630
  Sty:  STM0077 STM0858 STM1352
  Pae:  PA2953
  Xfa:  XF1298
  Nme:  NMB0581
  NmA:  NMA0766
  Rso:  RSc1567 RSp0354 RSp1423
  Atu:  AGc1825
  Sme:  SMa0817 SMc02377
  Bme:  BMEI1320
  Mlo:  mll5860 mlr7709
  Ccr:  CC0555 CC1334
_______

[R] COG0645 Predicted kinase
  Hbs:  VNG1964a
  Aae:  aq_1484
  Dra:  DR0609 DR2139 DR2467
  Mtu:  Rv2004c_2
  MtC:  MT2060_2
  Syn:  slr0207_2
  Nos:  alr4787_2
  Pae:  PA4701_2
  Sme:  SMc02847
  Mlo:  mll6593_2
  Ccr:  CC0920_2
_______

[E] COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain
  Tma:  TM0268_1
  Fnu:  FN0163
  Dra:  DR0966_1
  Cac:  CAC0291_1 CAC0578_1
  Cgl:  Cgl1471_1
  Mtu:  Rv2124c_1
  MtC:  MT2183_1
  Mle:  ML1307_1
  Sau:  SA0345_1
  Lin:  lin1786_1
  Bsu:  BS_yitJ_1
  Bha:  BH1629_1 BH1630_1
  Syn:  slr0212_1
  Nos:  alr0308_1
  Eco:  metH_1
  EcZ:  ZmetH_1
  Ecs:  ECs4937_1
  Ype:  YPO3722_1
  Sty:  STM4188_1
  Vch:  VC0390_1
  Pae:  PA1843_1
  Rso:  RSc0295
  Atu:  AGc3907_1
  Sme:  SMc03112_1 SMc04325
  Bme:  BMEI1759_1
  Mlo:  mlr1220
  Ccr:  CC2138
_______

[G] COG0647 Predicted sugar phosphatases of the HAD superfamily
  Afu:  AF0374
  Hbs:  VNG0719G VNG0882Gm
  Pho:  PH1952
  Pab:  PAB1056
  Sso:  SSO2355
  Ape:  APE1605
  Sce:  YDL236w YKR070w
  Spo:  SPAC22A12.08c_1 SPBC15D4.15
  Aae:  aq_966
  Tma:  TM1742
  Fnu:  FN0048 FN1255
  Cgl:  Cgl1376 Cgl2203
  Mtu:  Rv1225c Rv1692
  MtC:  MT1263 MT1731
  Lla:  L156445
  Spy:  SPy1043
  Spn:  SP1407
  Sau:  SA0790
  Lin:  lin2500
  Bsu:  BS_araL BS_yutF
  Bha:  BH1074 BH3428
  Eco:  nagD
  EcZ:  ZnagD
  Ecs:  ECs0705
  Ype:  YPO2624
  Sty:  STM0681
  Pae:  PA3886
  Cje:  Cj0315
  Atu:  AGc1226
  Sme:  SMc00910 SMc01617
  Bme:  BMEII1045
  Mlo:  mlr3604 mlr8242
  Ccr:  CC0705
  Rpr:  RP581
  Rco:  RC0885
_______

[L] COG0648 Endonuclease IV
  Hbs:  VNG0183G
  Mac:  MA3548
  Mth:  MTH1010
  Mja:  MJ0133
  Tac:  Ta0096 Ta0891
  Tvo:  TVN0157 TVN0971
  Pho:  PH1905
  Pab:  PAB1103
  Pya:  PAE3257
  Sso:  SSO2156
  Ape:  APE2104
  Sce:  YKL114c
  Spo:  SPCC622.17
  Ecu:  ECU11g1550i
  Aae:  aq_1629
  Tma:  TM0362
  Cac:  CAC1632
  Mtu:  Rv0670
  MtC:  MT0699
  Mle:  ML1889
  Sau:  SA1386
  Lin:  lin1487
  Bsu:  BS_yqfS
  Bha:  BH1386
  Eco:  nfo
  EcZ:  Znfo
  Ecs:  ECs3051
  Ype:  YPO1306
  Sty:  STM2203
  Buc:  BU137
  Vch:  VC2360
  Ctr:  CT625
  Cpn:  CPn0732
  Uur:  UU306
  Mpu:  MYPU_6210
  Mpn:  MPN328
  Mge:  MG235
_______

[C] COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7
  Afu:  AF1830
  Hbs:  VNG0637G_2
  Mac:  MA1498
  Tac:  Ta0967m
  Tvo:  TVN1113
  Pho:  PH1447
  Pab:  PAB0495
  Pya:  PAE0617 PAE1582
  Sso:  SSO0324
  Ape:  APE1422
  Aae:  aq_1314_2 aq_551_2
  Tma:  TM1216
  Dra:  DR1503
  Mtu:  Rv3148
  MtC:  MT3236
  Syn:  slr0261
  Nos:  alr3355
  Eco:  nuoC_2
  EcZ:  ZnuoC_2
  Ecs:  ECs3170_2
  Ype:  YPO2553_2
  Sty:  STM2326_2
  Buc:  BU156_2
  Pae:  PA2639_2
  Xfa:  XF0308
  Nme:  NMB0244
  NmA:  NMA0016
  Rso:  RSc2059
  Hpy:  HP1263
  jHp:  jhp1184
  Cje:  Cj1576c
  Atu:  AGc2346
  Sme:  SMa1529 SMc01915
  Bme:  BMEI1155
  Mlo:  mll1367
  Ccr:  CC1952
  Rpr:  RP354
  Rco:  RC0482
_______

[C] COG0650 Formate hydrogenlyase subunit 4
  Mac:  MA4369
  Mth:  MTH1237 MTH393
  Mja:  MJ0520 MJ1362
  Mka:  MK0468
  Tvo:  TVN1453
  Pho:  PH1439 PH1450
  Pab:  PAB0492 PAB1393 PAB1893
  Sso:  SSO1026
  Tma:  TM1213
  Mtu:  Rv0084
  MtC:  MT0091
  Eco:  hycD hyfC
  EcZ:  ZhycD ZhyfC
  Ecs:  ECs3345 ECs3578
  Sty:  STM2850
_______

[CP] COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
  Afu:  AF1825
  Hbs:  VNG0560C VNG0562C VNG0563G
  Mac:  MA4368 MA4371 MA4569
  Mth:  MTH1246
  Mja:  MJ1309
  Tvo:  TVN1455 TVN1458
  Pho:  PH0941 PH1431 PH1451 PH1452
  Pab:  PAB0490 PAB0806 PAB1392 PAB1402 PAB1888 PAB2416
  Pya:  PAE1576
  Sso:  SSO0328_1 SSO1021 SSO1024
  Ape:  APE1415
  Tma:  TM1105 TM1211 TM1212
  Dra:  DR0883
  Cgl:  Cgl0268 Cgl2674
  Mtu:  Rv0083 Rv0086
  MtC:  MT0090 MT0093
  Sau:  SA0581 SA0810
  Lin:  lin2480
  Bsu:  BS_yufD
  Bha:  BH1316
  Syn:  slr2007 slr2009
  Nos:  all1842
  Eco:  hycC hyfB hyfF
  EcZ:  ZhycC ZhyfB ZhyfF
  Ecs:  ECs3344 ECs3348 ECs3579
  Sty:  STM2851
  Vch:  VCA0155
  Pae:  PA1056
  Atu:  AGc1663 AGc899
  Sme:  SMa1538 SMa1541 SMc00054 SMc03181
  Bme:  BMEII0768
  Rpr:  RP282 RP283 RP284
  Rco:  RC0378 RC0381 RC0382
_______

[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
  Hbs:  VNG1914G
  Mac:  MA1661
  Mth:  MTH1338
  Sce:  YCR069w YDR155c YDR304c YHR057c YJR032w_1 YLR216c_1 YML078w
        YNR028w
  Spo:  SPAC1B3.03c_1 SPAC21E11.05c SPAC57A10.03 SPBC16H5.05c SPBC1709.04c SPBC17G9.05_1 SPBC28F2.03
        SPBP8B7.25 SPCC553.04_2
  Ecu:  ECU08g0470 ECU10g1760
  Fnu:  FN0342 FN1800
  Dra:  DR0237 DR1893 DR2542
  Cac:  CAC2769
  Cgl:  Cgl0034 Cgl1611
  Mtu:  Rv0009 Rv2582
  MtC:  MT0011 MT2659
  Mle:  ML0011 ML0492
  Lla:  L113864 L168484
  Spy:  SPy0457
  Spn:  SP0771 SP1538_2
  Sau:  SA0815
  Lin:  lin2475
  Bsu:  BS_ppiB
  Bha:  BH1545
  Syn:  sll0227 sll0408_2 slr1251
  Nos:  all4287 alr5059_2
  Eco:  ppiA ppiB
  EcZ:  ZppiA ZppiB
  Ecs:  ECs0587 ECs4214
  Ype:  YPO0167 YPO3074
  Sty:  STM0536 STM3472
  Vch:  VC1849 VC2299
  Pae:  PA1793 PA3227
  Hin:  HI0079
  Pmu:  PM0943 PM0944
  Xfa:  XF1212
  Nme:  NMB0791 NMB1262
  NmA:  NMA1002 NMA1469
  Rso:  RSc1164 RSc1165
  Hpy:  HP1441
  jHp:  jhp1334
  Cje:  Cj1171c
  Atu:  AGc3088 AGc3090
  Sme:  SMc01208 SMc01700
  Bme:  BMEI0887 BMEI0888
  Mlo:  mll0727 mll0728
  Ccr:  CC0979 CC1337 CC1582 CC1583 CC1584
  Tpa:  TP0947
_______

[U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)
  Aae:  aq_1870
  Tma:  TM1578
  Fnu:  FN1718
  Dra:  DR0575
  Cac:  CAC2846 CAC3537
  Cgl:  Cgl0735 Cgl1405
  Mtu:  Rv1821 Rv3240c
  MtC:  MT1869 MT3338
  Mle:  ML0779 ML2082
  Lla:  L0334
  Spy:  SPy1805
  Spn:  SP1702 SP1759
  Sau:  SA0708 SA2442
  Lin:  lin0592 lin2654
  Bsu:  BS_secA
  Bha:  BH3606
  Syn:  sll0616
  Nos:  alr4851
  Eco:  secA
  EcZ:  ZsecA
  Ecs:  ECs0102
  Ype:  YPO0564
  Sty:  STM0136
  Buc:  BU201
  Vch:  VC2394 VCA0628
  Pae:  PA1034 PA4403
  Hin:  HI0909
  Pmu:  PM1219
  Xfa:  XF0806
  Nme:  NMB1536
  NmA:  NMA1735
  Rso:  RSc0831 RSc2834
  Hpy:  HP0786
  jHp:  jhp0723
  Cje:  Cj0942c
  Atu:  AGl2621
  Sme:  SMc04458
  Bme:  BMEI0121
  Mlo:  mlr3468
  Ccr:  CC3068
  Rpr:  RP575
  Rco:  RC0879
  Ctr:  CT701
  Cpn:  CPn0841
  Tpa:  TP0379
  Bbu:  BB0154
  Uur:  UU119
  Mpu:  MYPU_1040
  Mpn:  MPN210
  Mge:  MG072
_______

[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
  Sce:  YBL098w YGR175c YGR255c
  Spo:  SPBC146.12 SPBC713.12
  Dra:  DRA0328 DRB0072
  Cgl:  Cgl1053 Cgl1132 Cgl2625_1 Cgl2968
  Mtu:  Rv0575c Rv1260 Rv1751
  MtC:  MT0604 MT1298 MT1794
  Sau:  SA2099
  Bsu:  BS_yetM BS_yhjG
  Bha:  BH1851 BH1998
  Syn:  slr1300
  Nos:  all3045 all4274 all4780 alr4247
  Eco:  mhpA ubiF ubiH visC
  EcZ:  Z3390 ZmhpA ZubiH ZvisC ZyleB
  Ecs:  ECs0402 ECs0700 ECs3027 ECs3777 ECs3778
  Ype:  YPO0908 YPO0909 YPO2621
  Sty:  STM0671 STM1546 STM2175 STM3056 STM3057
  Vch:  VC0963 VC1945 VC2474 VC2475
  Pae:  PA0247 PA2587 PA3328 PA4190 PA4217 PA5221 PA5223
  Pmu:  PM1002 PM1725 PM1726
  Xfa:  XF0834 XF0835
  Nme:  NMB0323
  NmA:  NMA2164
  Rso:  RSc0508 RSc0545 RSc1826_1 RSc2242 RSc2893 RSp0032_1 RSp0702
        RSp0911
  Atu:  AGc2901 AGc3301 AGc4730 AGc4995 AGl226 AGl646
  Sme:  SMa1939 SMa2097 SMb20583 SMc00316 SMc02116 SMc02891 SMc03804
  Bme:  BMEI0165 BMEI1017 BMEI1207 BMEII0640 BMEII0694
  Mlo:  mll0858 mll1411 mll3850 mll8158 mlr0511 mlr2028 mlr2092
        mlr4251 mlr4836 mlr6159 mlr6788 mlr7212
  Ccr:  CC0107 CC2404
  Rpr:  RP561
  Rco:  RC0848
_______

[R] COG0655 Multimeric flavodoxin WrbA
  Afu:  AF0343 AF1436 AF1519 AF1896
  Mac:  MA0327 MA0332 MA0406 MA0418 MA0444 MA0445 MA1189
        MA1773 MA1812 MA1836 MA1860 MA1902 MA1980 MA2167
        MA2191 MA2495 MA3608 MA3658 MA3740 MA3966 MA4356
  Mth:  MTH135 MTH1473 MTH1595
  Mja:  MJ0731 MJ1083
  Mka:  MK0938
  Sso:  SSO3155
  Sce:  YBR052c YCR004c YDR032c
  Spo:  SPAC3C7.14c
  Aae:  aq_2096
  Fnu:  FN1035
  Dra:  DRA0214
  Cac:  CAC0756 CAC2002_2 CAC2520_1 CAC2528 CAC3334 CAC3341 CAC3486
        CAC3495 CAC3505
  Mtu:  Rv0925c Rv2771c
  MtC:  MT0952 MT2841
  Mle:  ML1525
  Spn:  SP1951
  Sau:  SA0558
  Lin:  lin1620
  Bsu:  BS_yhcB BS_ywqN
  Bha:  BH1010
  Eco:  wrbA
  EcZ:  Z1504 ZwrbA
  Ype:  YPO1857
  Sty:  STM1119
  Vch:  VC2166
  Pae:  PA0949
  Xfa:  XF1094 XF1133 XF1733 XF1919
  Rso:  RSc0633 RSc1558 RSc2207
  Atu:  AGc3175 AGl1309
  Sme:  SMa0340 SMa1935 SMb20521 SMc00943
  Bme:  BMEI0936
  Ccr:  CC0791
  Rco:  RC0907
_______

[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase
  Hbs:  VNG0467G VNG1018G_2
  Tac:  Ta0027 Ta0419
  Tvo:  TVN0875 TVN1152
  Pho:  PH0031
  Pab:  PAB2329
  Pya:  PAE0606 PAE1381 PAE2929 PAE3247
  Sso:  SSO2779 SSO2885 SSO3209
  Ape:  APE1659 APE1961
  Sce:  YBR149w YDL124w YDR368w YHR104w YJR096w YOR120w
  Spo:  SPAC19G12.09 SPAC26F1.07 SPAC2F3.05c SPAP32A8.02 SPBC28F2.05c SPBC8E4.04 SPCC737.06c
  Ecu:  ECU01g0970
  Tma:  TM1009 TM1743
  Cac:  CAC1958
  Cgl:  Cgl0021 Cgl0512 Cgl1021 Cgl1320 Cgl2308
  Mtu:  Rv2971
  MtC:  MT3049
  Mle:  ML1669
  Lla:  L126956 L132617 L66233 L67726
  Spy:  SPy1693
  Spn:  SP1478
  Sau:  SA0658 SA1606 SA2001
  Lin:  lin0819 lin2349 lin2739 lin2848
  Bsu:  BS_ytbE BS_yvgN
  Bha:  BH2158 BH3849
  Syn:  slr0942
  Eco:  yafB yeaE yqhE
  EcZ:  Z0374 Z0377 Z2821 ZyafB ZyqhE
  Ecs:  ECs0203 ECs0335 ECs0338 ECs2490 ECs3896
  Ype:  YPO0676 YPO1075 YPO2805
  Sty:  STM0255 STM1288 STM1676 STM3165
  Pae:  PA0804 PA4167
  Rso:  RSc1154 RSc1500
  Atu:  AGc1584 AGc3682 AGl1141
  Sme:  SMa1410 SMa2157 SMb20656 SMc00101 SMc01429
  Bme:  BMEII1060
  Mlo:  mll1906 mlr5327
  Ccr:  CC3428
_______

[I] COG0657 Esterase/lipase
  Afu:  AF1716
  Mac:  MA2629
  Tvo:  TVN0727
  Sso:  SSO2493 SSO2517 SSO2521
  Sce:  YDR428c YGR263c
  Spo:  SPAC1039.03 SPAC4A8.06c SPAC8F11.08c SPAPB1A11.02 SPBPB2B2.02
  Tma:  TM1160
  Dra:  DR0133 DR0821_2 DR1485 DRA0340 DRB0033_1
  Cac:  CAC2917
  Cgl:  Cgl0119 Cgl0151 Cgl0872 Cgl1142_1
  Mtu:  Rv0217c Rv0220 Rv1076 Rv1399c Rv1400c Rv1426c Rv2284
        Rv2385 Rv2485c Rv2970c Rv3084 Rv3097c_2 Rv3487c
  MtC:  MT0227 MT0230 MT1106 MT1443 MT1444 MT1469 MT2342
        MT2453 MT2559 MT3048 MT3169 MT3181_2 MT3591
  Mle:  ML0314 ML1243
  Lla:  L141530 L42784
  Spy:  SPy1308 SPy1718
  Sau:  SA0310 SA0610 SA2140 SA2323
  Lin:  lin2194
  Bha:  BH2248 BH2806
  Syn:  sll0644
  Nos:  alr0079
  Eco:  aes
  EcZ:  ZybaC
  Ecs:  ECs0529
  Ype:  YPO2007 YPO2336
  Sty:  STM0490 STM4032
  Vch:  VCA0490
  Pae:  PA2098 PA5384
  Xfa:  XF1253 XF1743
  Rso:  RSc0439 RSc1772 RSc3312 RSp0232 RSp1108 RSp1111 RSp1429
  Atu:  AGc2981 AGc4503 AGpA499
  Sme:  SMa0259 SMc01093 SMc01650
  Mlo:  mll0618 mll1869 mll3568 mll4497 mll5717 mll7218 mlr0240
        mlr1247 mlr5045
  Ccr:  CC0771 CC1226 CC2298 CC2313 CC3346
  Tpa:  TP0935
_______

[R] COG0658 Predicted membrane metal-binding protein
  Aae:  aq_1618
  Tma:  TM1775
  Fnu:  FN0223
  Dra:  DR1854_1
  Cac:  CAC1271
  Cgl:  Cgl2296
  Mtu:  Rv2414c
  MtC:  MT2487
  Lla:  L0317_1
  Spy:  SPy1408_1
  Spn:  SP0955_1
  Sau:  SA1416_1
  Lin:  lin1517_1
  Bsu:  BS_comEC_1
  Bha:  BH1335_1
  Syn:  sll1929
  Nos:  all1983_1
  Eco:  ycaI_1
  EcZ:  ZycaI_1
  Ecs:  ECs0996_1
  Ype:  YPO1394_1
  Sty:  STM0983_1
  Vch:  VC1879_1
  Pae:  PA2984_1
  Hin:  HI0061_1
  Pmu:  PM0862_1
  Xfa:  XF1078_1
  Nme:  NMB0702_1
  NmA:  NMA0906_1
  Rso:  RSc1120_1
  Hpy:  HP1361
  jHp:  jhp1279
  Cje:  Cj1211
  Atu:  AGc2573
  Sme:  SMc02086
  Bme:  BMEI0839
  Mlo:  mll0627
  Ccr:  CC1904
  Rco:  RC0017
  Ctr:  CT339
  Cpn:  CPn0035
  Tpa:  TP0336
  Bbu:  BB0591
  Uur:  UU384
  Mpu:  MYPU_4610
  Mpn:  MPN451
  Mge:  MG316
_______

[P] COG0659 Sulfate permease and related transporters (MFS superfamily)
  Mac:  MA1999
  Sce:  YBR294w YGR125w YLR092w YPR003c
  Spo:  SPAC24H6.11c SPAC869.05c SPBC3H7.02 SPCC320.05
  Ecu:  ECU08g0530
  Aae:  aq_1268
  Cgl:  Cgl0846 Cgl1025 Cgl1438
  Mtu:  Rv1707 Rv1739c Rv3273_1
  MtC:  MT1748 MT1781 MT3373_1
  Mle:  ML2279
  Lla:  L1004 L55129
  Lin:  lin0529 lin0896
  Bsu:  BS_ybaR BS_yvdB
  Bha:  BH0414
  Syn:  sll0834 slr0096 slr1229 slr1776
  Nos:  all1304 alr1633 alr1635
  Eco:  ychM
  EcZ:  ZychM
  Ecs:  ECs1711
  Sty:  STM1781
  Vch:  VC0587 VC2031 VCA0077 VCA0103
  Pae:  PA0029 PA0103 PA1647 PA2563
  Pmu:  PM0948
  Rso:  RSp0113 RSp1519
  Hpy:  HP0228
  jHp:  jhp0213
  Atu:  AGc2140 AGc2836
  Sme:  SMb20070 SMc00476
  Mlo:  mlr0734 mlr4576
  Ctr:  CT856
  Cpn:  CPn1014
_______

[R] COG0661 Predicted unusual protein kinase
  Hbs:  VNG1770C
  Mac:  MA1325 MA1861
  Mth:  MTH1645
  Tac:  Ta0865
  Tvo:  TVN0776
  Sso:  SSO2605
  Sce:  YGL119w YLR253w YPL109c
  Spo:  SPAC10F6.14c SPBC15C4.02 SPBC21C3.03 SPBC2D10.18
  Cac:  CAC0033
  Mtu:  Rv0647c Rv3197
  MtC:  MT0675 MT3290
  Mle:  ML0640 ML1898
  Bha:  BH2708
  Syn:  sll0005 sll0095 sll1770 slr0889 slr1919
  Nos:  all0592 all4960 alr0189 alr4515
  Eco:  aarF
  EcZ:  ZyigR
  Ecs:  ECs4765
  Ype:  YPO3779
  Sty:  STM3972
  Vch:  VC0085
  Pae:  PA5065
  Pmu:  PM1688
  Xfa:  XF1833
  Nme:  NMB0559
  NmA:  NMA0741
  Rso:  RSc0461
  Atu:  AGc558
  Sme:  SMc01156
  Bme:  BMEII0234
  Mlo:  mlr3166
  Ccr:  CC3312 CC3709
  Rpr:  RP678 RP679
  Rco:  RC1036
_______

[G] COG0662 Mannose-6-phosphate isomerase
  Afu:  AF1097_2
  Mac:  MA0781_2 MA2076_2 MA2381_2 MA2922_2 MA3163 MA3187_2 MA3617
        MA3643 MA3781_2
  Mth:  MTH1523_2 MTH352
  Mja:  MJ1618
  Mka:  MK0873 MK1642
  Pho:  PH0925_2
  Pab:  PAB0818_2
  Aae:  aq_589_2
  Tma:  TM1287
  Fnu:  FN0550
  Mtu:  Rv3471c
  MtC:  MT3577
  Bsu:  BS_ydbB BS_yrkC
  Bha:  BH0377 BH2720_2
  Syn:  slr0493 slr2074
  Nos:  all3747 all4342 all4538
  Eco:  cpsB_2
  EcZ:  ZcpsB_2 ZmanC_2
  Ecs:  ECs2836_2 ECs2854_2
  Ype:  YPO3099_2
  Sty:  STM2084_2 STM2105_2
  Vch:  VC0241_2
  Pae:  PA2232_2 PA2490 PA3551_2 PA5452_2
  Xfa:  XF0259_2
  Nme:  NMB1881
  NmA:  NMA0001 NMA0576
  Rso:  RSc1819
  Hpy:  HP0043_2
  jHp:  jhp0037_2
  Atu:  AGl2354 AGl2939_2
  Sme:  SMc04463
  Bme:  BMEI1395_2 BMEII0900_2
  Mlo:  mll4305 mll6572 mll6738 mll9386 mlr2709 mlr5802_2
  Ccr:  CC3157
_______

[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
  Mac:  MA1098 MA1134 MA2536
  Mth:  MTH1588
  Mja:  MJ0304
  Mka:  MK0112 MK0772_2
  Tac:  Ta0552 Ta0881m
  Tvo:  TVN0606 TVN0980
  Pho:  PH1591
  Pab:  PAB0393
  Sso:  SSO0372
  Aae:  aq_1660
  Dra:  DR2089
  Cac:  CAC1048
  Cgl:  Cgl0121
  Mtu:  Rv3525c
  MtC:  MT3625
  Bsu:  BS_ytoA
  Bha:  BH0211 BH3289
  Syn:  sll1031_1 sll1636
  Nos:  all0865_1 alr1024
  Eco:  caiE paaY yrdA
  EcZ:  Z4650 ZcaiE
  Ecs:  ECs0038 ECs4145
  Sty:  STM0069 STM3399
  Vch:  VC0058
  Pae:  PA0066 PA3753 PA5540
  Xfa:  XF1984 XF2095
  Nme:  NMB0625
  NmA:  NMA0833
  Rso:  RSc1133
  Cje:  Cj0229
  Atu:  AGc2798
  Sme:  SMc04241
  Bme:  BMEI0736
  Mlo:  mll0380 mlr0180
  Ccr:  CC2643
  Rpr:  RP516
  Rco:  RC0635
_______

[T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
  Sce:  YIL033c YML059c_1
  Spo:  SPAC8C9.03 SPCC4B3.04c_1
  Ecu:  ECU05g0070_1 ECU08g0930
  Aae:  aq_490
  Tma:  TM1171
  Fnu:  FN0217 FN1901
  Dra:  DR0834 DR0997 DR1646 DR2362
  Cac:  CAC0884 CAC1511 CAC3336 CAP0082
  Cgl:  Cgl0291 Cgl1148 Cgl2910
  Mtu:  Rv0073_2 Rv0104 Rv0998_1 Rv1675c Rv2434c_2 Rv2564_2 Rv2565_1
        Rv3239c_2 Rv3676 Rv3728_2
  MtC:  MT0079_2 MT0113 MT1027_1 MT1714 MT2508_2 MT2640_2 MT2641_1
        MT3337_2 MT3777 MT3831_2
  Mle:  ML0187_1 ML2302
  Lla:  L0239 L0245
  Spy:  SPy1548 SPy1857
  Sau:  SA2424
  Lin:  lin0194 lin0300 lin0309 lin0552 lin0557 lin0606 lin0742
        lin1218 lin2236 lin2237 lin2268 lin2269 lin2887
  Bsu:  BS_fnr
  Bha:  BH0231
  Syn:  sll0594 sll1169 sll1371 sll1423 sll1924 slr0449 slr0510_2
        slr0593 slr0607 slr0842_1 slr1529_1 slr1575_2
  Nos:  all1035 all2031 all2930 all3558_1 all4500 all4541 alr0295
        alr0618 alr2325 alr3952 alr4010 alr4392 alr4454 alr4564_2
  Eco:  crp fnr yeiL
  EcZ:  Zcrp Zfnr ZyeiL
  Ecs:  ECs1915 ECs3055 ECs4208
  Ype:  YPO0175 YPO2300
  Sty:  STM1660 STM3466
  Vch:  VC1434 VC2563 VC2614 VCA0135
  Pae:  PA0275 PA0527 PA0652 PA1544 PA4704
  Hin:  HI0804 HI0957 HI1425
  Pmu:  PM0599 PM0668 PM1157
  Xfa:  XF1540
  Nme:  NMB0380
  NmA:  NMA2107
  Rso:  RSc0190 RSc1283 RSc3177 RSp0805 RSp0966
  Cje:  Cj0466
  Atu:  AGc1912 AGc2948 AGc4344 AGc4670 AGc5008 AGl1121_2 AGl974
        AGpA717
  Sme:  SMa0662 SMa0762 SMa1011 SMa1067 SMa1141 SMa1207 SMa1225
        SMa1245 SMa1948 SMb20558 SMb21079 SMb21270 SMc01954 SMc02175
        SMc03819
  Bme:  BMEI0067 BMEI1294 BMEI1752 BMEII0854 BMEII0947 BMEII0966 BMEII0986
  Mlo:  mll3135 mll3241_2 mll3694 mll6578 mll6632 mll9196 mlr0973_2
        mlr2110 mlr3256 mlr4239 mlr6409
  Ccr:  CC0752 CC1410 CC1412 CC2171_1 CC2702_1
  Ctr:  CT235
  Cpn:  CPn0294
  Tpa:  TP0089 TP0261_1 TP0262 TP0995
_______

[E] COG0665 Glycine/D-amino acid oxidases (deaminating)
  Afu:  AF0274
  Hbs:  VNG0281G
  Mac:  MA0465_1
  Tac:  Ta0577
  Tvo:  TVN0650
  Pho:  PH1364 PH1751
  Pab:  PAB0214 PAB1843
  Pya:  PAE1543 PAE2095 PAE2310 PAE2703
  Sso:  SSO0021 SSO0187 SSO0985 SSO2233
  Ape:  APE0800 APE1267
  Sce:  YHR009c
  Spo:  SPAC139.04c SPAC1F5.03c SPAC6G10.06 SPBC354.15 SPCC1450.07c
  Aae:  aq_707
  Dra:  DR1673
  Cac:  CAC2596_1
  Cgl:  Cgl1541 Cgl1543 Cgl1991 Cgl2955
  Mtu:  Rv0415 Rv1905c
  MtC:  MT0428 MT1956
  Mle:  ML0299 ML2011
  Lla:  L125707
  Spy:  SPy0932
  Spn:  SP1608
  Lin:  lin2024
  Bsu:  BS_yhfW_1 BS_yjbR BS_yurR
  Bha:  BH1434 BH2041 BH3871_1
  Syn:  sll1025 slr0633_1 slr0734
  Nos:  all1354 all2776 all3519_1
  Eco:  dadA ordL solA yfcK_2
  EcZ:  Z3587_2 ZdadA ZordL ZsolA
  Ecs:  ECs1437 ECs1684 ECs1878 ECs3208_2
  Ype:  YPO2147 YPO2448 YPO2756_2
  Sty:  STM1160 STM1803 STM2379_2 STM3128
  Vch:  VC0786 VC2110_2
  Pae:  PA0534 PA1028 PA1267 PA1565 PA1567 PA1918 PA2195
        PA2317 PA2776 PA3424 PA3456_2 PA3863 PA4186 PA4548
        PA5084 PA5304 PA5309 PA5416
  Hin:  HI0499 HI1535_2 HI1536
  Pmu:  PM0338_2 PM1383
  Xfa:  XF0851
  Nme:  NMB0176 NMB0614 NMB0741 NMB2068
  NmA:  NMA0092 NMA0364 NMA0819 NMA0954
  Rso:  RSc0112 RSc0507 RSc0926 RSc1101 RSc1709_2 RSc2113 RSc2262
        RSc3407 RSp0046 RSp1431 RSp1590
  Hpy:  HP0943
  jHp:  jhp0878
  Cje:  Cj1268c_2
  Atu:  AGc1066 AGc3012_1 AGc323 AGc328 AGc3826 AGc3830 AGc4235
        AGc4639 AGc4654 AGl1106 AGl1275 AGl1429 AGl1577 AGl1791
        AGl1801 AGl1811 AGl2815 AGl2836 AGl2918 AGl3050 AGl3510
        AGl3517 AGl400 AGpA5 AGpT61
  Sme:  SMa1386 SMa1483_1 SMa1592_1 SMa1593 SMa1850 SMa1869 SMa2193
        SMa2223 SMb20267 SMb20616 SMb20877 SMb21179 SMb21529 SMb21534_1
        SMc00761 SMc00797 SMc01576 SMc01662_1 SMc01663_1 SMc01856 SMc01972
        SMc01987_1 SMc02428_1 SMc02608 SMc03132 SMc03200 SMc03265 SMc03933
  Bme:  BMEI0256 BMEI0684_1 BMEI1722 BMEI1733 BMEII0373 BMEII0391 BMEII0521
        BMEII0582
  Mlo:  mll1258_1 mll1517_1 mll1653_1 mll2449_1 mll2947 mll3111 mll3980
        mll3992 mll4186 mll4416 mll5232 mll5352 mll5369_1 mll5793
        mll6240 mll6285 mll6520 mll6667 mll7022 mll7029 mll7103
        mll7172 mll7306 mlr1213_1 mlr1273 mlr1280_1 mlr1283_1 mlr1836
        mlr3020 mlr5698 mlr5845 mlr5915 mlr7042 mlr7120 mlr8469
        mlr9020 mlr9201
  Ccr:  CC0748_2 CC2329 CC3129
  Ctr:  CT375
  Cpn:  CPn1030
  Bbu:  BB0756
_______

[R] COG0666 FOG: Ankyrin repeat
  Tac:  Ta0196
  Tvo:  TVN1399
  Pya:  PAE1861
  Sce:  YAR042w YCR051w YDL019c_1 YDL056w YDR264c_1 YER111c YGL242c
        YGR232w YGR233c_2 YIL001w YIL112w YIR033w YKL020c YLR182w
        YMR068w YOR034c_1 YPL110c_2 YPL239w YPR089w
  Spo:  SPAC105.02c SPAC13D6.04c SPAC22F3.09c SPAC26H5.05 SPAC2F7.10_1 SPAC6C3.08 SPAPB1E7.05_2
        SPBC2F12.05c_1 SPBC336.12c SPBC725.16 SPBP16F5.05c SPCC330.11_1 SPCP1E11.10
  Ecu:  ECU03g1590 ECU10g0720_1
  Fnu:  FN0178 FN0179 FN1235
  Dra:  DR0127_2 DR1961 DRA0257
  Cac:  CAC1641 CAC1645
  Cgl:  Cgl0131 Cgl2006 Cgl2294
  Syn:  slr1109
  Nos:  all1426 all2748 alr7243_1
  Eco:  arp b1721m yahD
  EcZ:  Z2749 Z4326 Z5200 Zarp ZyahD
  Ecs:  ECs0367 ECs2427 ECs3855 ECs4643 ECs4935
  Ype:  YPO1002 YPO2707 YPO3339
  Vch:  VC1584
  Pae:  PA2498 PA3287 PA4612
  Pmu:  PM1462
  Xfa:  XF1640
  Nme:  NMB1133_2 NMB1171_2
  NmA:  NMA1343_2
  Rso:  RSc0257 RSc0781 RSc1788 RSp0097 RSp1215
  Cje:  Cj0834c Cj1386
  Atu:  AGc3306
  Sme:  SMc01158
  Mlo:  mll0182
  Ccr:  CC1639_2
  Rpr:  RP226_2 RP714
  Rco:  RC0308_2 RC0701 RC0860
  Tpa:  TP0502 TP0835
  Bbu:  BB0399
_______

[C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
  Hbs:  VNG0268C VNG0998G VNG1628G VNG2023G
  Tac:  Ta0287m Ta1452
  Tvo:  TVN0128 TVN1314
  Pya:  PAE1127
  Sso:  SSO0430 SSO3014 SSO3054
  Ape:  APE1495
  Sce:  YCR107w YDL243c YFL056c YFL057c YJR155w YMR041c YNL331c
        YOL165c YPL088w YPR127w
  Spo:  SPAC1F7.12 SPAC3A11.11c SPAC977.14c SPAC9E9.11 SPBC215.11c SPCC1281.04 SPCC965.06
  Aae:  aq_323
  Tma:  TM0313 TM1006 TM1297
  Fnu:  FN1688
  Dra:  DR0249 DR1890 DR2261 DR2317
  Cgl:  Cgl0100 Cgl1232 Cgl1480
  Mtu:  Rv2298
  MtC:  MT2355
  Mle:  ML0458
  Lla:  L48789
  Sau:  SA0557 SA1331
  Lin:  lin0876 lin2113
  Bsu:  BS_iolS BS_yccK BS_yhdN BS_yqkF BS_yrpG
  Bha:  BH1011 BH2324
  Syn:  slr0545 slr1503
  Nos:  all1225 all2277 all2316 alr0300 alr2054
  Eco:  tas yajO ydbC ydjG yghZ
  EcZ:  Z2809 Z4152 Z4354 ZyajO ZydbC
  Ecs:  ECs0473 ECs2008 ECs2480 ECs3691 ECs3885
  Ype:  YPO0790 YPO2461 YPO2806 YPO2980
  Sty:  STM0421 STM2406 STM3008
  Vch:  VC0667
  Pae:  PA1127 PA1739 PA2535 PA3795 PA4434 PA4992
  Xfa:  XF0367 XF1723 XF1724 XF1729
  Rso:  RSc0217 RSp1473
  Hpy:  HP1193
  Atu:  AGc2023 AGc2811 AGc447 AGc452 AGc5108 AGl1936 AGl2031
        AGl2047 AGl2607 AGl2777 AGl29 AGl3327_2 AGl37 AGl569
        AGpA274
  Sme:  SMa0563 SMa1403 SMa2077 SMa2313_2 SMb20500 SMb20648 SMc00368
        SMc00369 SMc00374 SMc00570 SMc01702 SMc02775 SMc04056 SMc04252
        SMc04322
  Mlo:  mll0645 mll1952 mll3309 mll3531 mll8386 mll8482 mll9720
        mlr0100 mlr1801 mlr2172 mlr3332 mlr4079 mlr4087 mlr5051
        mlr6441_2 mlr6739 mlr7180 mlr9555
  Ccr:  CC2641 CC3002 CC3576 CC3662
  Bbu:  BB0528
_______

[M] COG0668 Small-conductance mechanosensitive channel
  Afu:  AF1546
  Hbs:  VNG1164C VNG1388H VNG2113C
  Mac:  MA1020 MA1718 MA1724 MA1827 MA2642 MA3398 MA3436
  Mth:  MTH1830
  Mja:  MJ0170 MJ0700 MJ1143
  Mka:  MK0815
  Tac:  Ta0796 Ta0909
  Tvo:  TVN0705 TVN0821
  Pho:  PH0336
  Pab:  PAB1281
  Pya:  PAE1270 PAE3214 PAE3252
  Sso:  SSO0550 SSO2769 SSO2786 SSO2829
  Ape:  APE1441 APE1867
  Spo:  SPAC2C4.17c SPCC1183.11
  Ecu:  ECU01g1170 ECU01g1240 ECU03g1000 ECU10g0470 ECU10g1360
  Aae:  aq_1013 aq_812
  Tma:  TM1563
  Fnu:  FN0619
  Dra:  DR0211 DR1995
  Cac:  CAC3726
  Cgl:  Cgl1240_1
  Mtu:  Rv2434c_1 Rv3104c
  MtC:  MT2508_1 MT3187
  Lla:  L122632
  Spy:  SPy1897
  Spn:  SP1752
  Sau:  SA0349
  Lin:  lin1012
  Bsu:  BS_yfkC BS_yhdY BS_ykuT
  Bha:  BH2666 BH2683
  Syn:  sll0590_2 sll0985_2 sll1040_2 slr0109 slr0639 slr0765_2
  Nos:  all1413 all7382 alr1196 alr3020 alr3692 alr3693 alr7628
  Eco:  ybdG ybiO_2 yggB ynaI
  EcZ:  Z2437 ZybdG ZybiO_2 ZyggB
  Ecs:  ECs0615 ECs0886_2 ECs1912 ECs3795
  Ype:  YPO0919 YPO2470
  Sty:  STM0569 STM0827_2 STM1260 STM1663 STM3067 STM4102
  Buc:  BU452
  Vch:  VC0265 VC0480 VC1751 VCA0181
  Pae:  PA1775 PA3468 PA4394 PA4925 PA5121_2 PA5251
  Xfa:  XF0437 XF1258
  Nme:  NMB0042 NMB0213
  NmA:  NMA0055 NMA0288
  Rso:  RSc2662 RSc3068_2 RSp0514
  Hpy:  HP0284_2 HP0415_2 HP0983
  jHp:  jhp0269_2 jhp0915 jhp0969_2
  Cje:  Cj0238_2 Cj1007c_2
  Atu:  AGc1937 AGc2838 AGl1121_1 AGl1133
  Sme:  SMa0175 SMa0630 SMa0631 SMa0937 SMa1678 SMb20863 SMb21251
  Bme:  BMEI0944
  Mlo:  mll3287 mlr0973_1 mlr4006
  Ccr:  CC3612
  Rpr:  RP047
  Rco:  RC0073
  Tpa:  TP0822
  Bbu:  BB0453
_______

[H] COG0669 Phosphopantetheine adenylyltransferase
  Aae:  aq_253
  Tma:  TM0741
  Fnu:  FN0156
  Dra:  DR0642
  Cac:  CAC1738
  Cgl:  Cgl1297
  Mtu:  Rv2965c
  MtC:  MT3043
  Mle:  ML1663
  Lla:  L21952
  Spy:  SPy1537
  Spn:  SP1968
  Sau:  SA0973
  Lin:  lin2158
  Bsu:  BS_ylbI
  Bha:  BH2589
  Syn:  slr0847
  Nos:  alr4700
  Eco:  kdtB
  EcZ:  ZkdtB
  Ecs:  ECs4509
  Ype:  YPO0053
  Sty:  STM3725
  Buc:  BU583
  Vch:  VC0222
  Pae:  PA0363
  Hin:  HI0651
  Pmu:  PM1304
  Xfa:  XF0980
  Nme:  NMB2019
  NmA:  NMA0421
  Rso:  RSc0390
  Hpy:  HP1475
  jHp:  jhp1368
  Cje:  Cj0767c
  Atu:  AGc3091
  Sme:  SMc01209
  Bme:  BMEI0886
  Mlo:  mll0730
  Ccr:  CC1581
  Tpa:  TP0283
  Bbu:  BB0702
  Mpu:  MYPU_0970
_______

[R] COG0670 Integral membrane protein, interacts with FtsH
  Sce:  YNL305c
  Spo:  SPCC576.04
  Fnu:  FN0866
  Dra:  DR0893
  Cac:  CAC2831
  Lla:  L177346
  Spy:  SPy0358
  Spn:  SP1972
  Sau:  SA0621
  Lin:  lin2310
  Bsu:  BS_yetJ
  Syn:  sll1150
  Nos:  all7160 asl7159
  Eco:  ybhL ybhM yccA
  EcZ:  ZybhL ZybhM ZyccA
  Ecs:  ECs0864 ECs0865 ECs1054
  Ype:  YPO1163
  Sty:  STM0807 STM0808 STM1085 STM3863
  Vch:  VC1358
  Pae:  PA2604
  Hin:  HI0044
  Pmu:  PM0402
  Nme:  NMB2020
  NmA:  NMA0420
  Rso:  RSc1210
  Hpy:  HP0920
  jHp:  jhp0854
  Cje:  Cj0236c
  Atu:  AGc4861
  Sme:  SMc03839
  Bme:  BMEI1859
  Mlo:  mll4343 mlr0409
  Ccr:  CC3663
  Rpr:  RP147
  Rco:  RC0189
  Ctr:  CT819
  Cpn:  CPn0971
  Bbu:  BB0539
  Mpu:  MYPU_2270
_______

[I] COG0671 Membrane-associated phospholipid phosphatase
  Hbs:  VNG0763G VNG2091H
  Mac:  MA1569 MA4148
  Mth:  MTH798
  Mja:  MJ0374_2 MJ0611.1 MJ0662
  Mka:  MK0197 MK0669 MK1191
  Pho:  PH1657
  Pab:  PAB2021
  Sso:  SSO2653
  Sce:  YDR284c YDR503c YGR036c YJL134w YKR053c
  Spo:  SPAC823.11 SPBC409.18 SPBC530.12c_2
  Ecu:  ECU10g1440
  Aae:  aq_1706
  Fnu:  FN0945
  Dra:  DR0956 DR1014 DR1355
  Cac:  CAC0605 CAC0633 CAC0742_1 CAC1294_2 CAC1489 CAC2395 CAC2438
        CAC2537
  Cgl:  Cgl1166_1 Cgl2820 Cgl2823
  Mtu:  Rv0308 Rv3807c
  MtC:  MT0321 MT3914
  Mle:  ML0094
  Lla:  L125873 L32731
  Spy:  SPy0374 SPy1836
  Spn:  SP0489 SP1916
  Sau:  SA0415 SA1250
  Lin:  lin1664 lin2125
  Bsu:  BS_yodM BS_ywoA
  Bha:  BH2687
  Syn:  sll0545
  Nos:  all7623 alr1715_2
  Eco:  pgpB ybjG yeiU ynbD_1
  EcZ:  Z3433 ZpgpB ZybjG ZynbD_1
  Ecs:  ECs0921 ECs1851 ECs2013_1 ECs3066
  Ype:  YPO1276 YPO1324 YPO2223 YPO2813_1
  Sty:  STM0865 STM1710 STM2213 STM3595_1 STM4319
  Vch:  VC2488 VCA0035
  Pae:  PA0190 PA2539_1 PA4011_2 PA5194
  Hin:  HI0211
  Pmu:  PM0676
  Xfa:  XF0277_2 XF2574
  Rso:  RSc0131_1 RSc3142 RSp0404
  Hpy:  HP0021 HP0350 HP0851 HP1580
  jHp:  jhp0019 jhp0324 jhp0787 jhp1487
  Atu:  AGc4033 AGc4732 AGl612_1
  Sme:  SMc04406
  Bme:  BMEI1212 BMEII1103
  Mlo:  mll2704 mll6491 mll8081 mll9678 mlr0012 mlr4571 mlr8056
  Ccr:  CC0358 CC3019
  Rpr:  RP870
  Rco:  RC1343
  Tpa:  TP0551
_______

[P] COG0672 High-affinity Fe2+/Pb2+ permease
  Afu:  AF0154
  Ape:  APE2490
  Sce:  YBR207w YER145c
  Spo:  SPAC1F7.07c
  Tma:  TM0417
  Fnu:  FN1251
  Sau:  SA0333
  Lin:  lin0384
  Bsu:  BS_ywbL
  Syn:  slr0964
  Nos:  all3939
  Eco:  ycdNm
  EcZ:  Z1519
  Ecs:  ECs1263
  Ype:  YPO1854 YPO1941
  Pae:  PA5248_2
  Pmu:  PM0453
  Nme:  NMB0034
  NmA:  NMA0280
  Cje:  Cj1658
  Bme:  BMEII0883
  Rpr:  RP393
  Rco:  RC0540
  Tpa:  TP0972
_______

[R] COG0673 Predicted dehydrogenases and related proteins
  Hbs:  VNG1018G_1
  Mac:  MA4448
  Mth:  MTH875
  Mka:  MK0248
  Tac:  Ta0250 Ta0781 Ta1182
  Tvo:  TVN0390 TVN1345
  Pho:  PH1881 PH1882
  Pab:  PAB0775 PAB1138 PAB1139
  Pya:  PAE0870
  Sso:  SSO3008 SSO3011 SSO3013 SSO3015 SSO3049
  Sce:  YML051w YMR315w
  Spo:  SPAC26H5.09c SPAC513.06c SPACUNK4.17 SPBC115.03 SPBC12C2.04
  Aae:  aq_440
  Tma:  TM0312 TM0414 TM0425 TM0426 TM0585
  Dra:  DR0799 DR1362
  Cac:  CAC1231 CAC1480 CAC3400 CAP0135
  Cgl:  Cgl0164 Cgl0167 Cgl0171 Cgl2057 Cgl2503 Cgl2583 Cgl2584
        Cgl3000 Cgl3002 Cgl3003
  Lla:  L109882 L194226 L63684 L75267
  Spy:  SPy0441 SPy2107
  Spn:  SP1325 SP1482 SP1686
  Sau:  SA0210 SA0211
  Lin:  lin0303 lin0375 lin1837 lin1972 lin2262 lin2266 lin2932
        lin2967
  Bsu:  BS_iolG BS_yfiI BS_yhjJ BS_yisS BS_yrbE BS_yteT BS_yulF
        BS_yvaA
  Bha:  BH0487 BH0708 BH0710 BH1248 BH2165 BH2220 BH2221
        BH2316 BH2703 BH3843
  Syn:  sll0816 slr0338 slr1784
  Nos:  all4106 all4252 all5094 alr4149
  Eco:  mviM ycjS ydgJ ygjR yhhX yjhC
  EcZ:  Z2629 ZmviM ZycjS ZygjR ZyhhX
  Ecs:  ECs1446 ECs1894 ECs2332 ECs3969 ECs4289
  Ype:  YPO0585 YPO1892 YPO2042_2 YPO2259 YPO2584 YPO3618
  Sty:  STM1133 STM1169 STM1462 STM2753 STM3223 STM3545 STM4425
        STM4433
  Vch:  VCA0099 VCA1048
  Pae:  PA0237 PA3158 PA5149
  Pmu:  PM0652 PM1759 PM1765
  Rso:  RSc1246 RSc1248 RSp0913 RSp1011_2 RSp1061 RSp1076
  Hpy:  HP0679
  jHp:  jhp0620
  Cje:  Cj0504c Cj1330
  Atu:  AGc2059 AGc457 AGc4719 AGl1005 AGl1682 AGl1778 AGl1780
        AGl1782 AGl2949 AGl2956 AGl3148 AGl3163 AGl3327_1 AGl3382
        AGl3386 AGl628 AGl720 AGl984 AGpA265 AGpA276 AGpA638
        AGpA7
  Sme:  SMa1973 SMa2313_1 SMb20013 SMb20247 SMb20330 SMb20353 SMb20899
        SMb21109 SMb21148 SMb21355 SMb21597 SMc00375 SMc00588 SMc01163
        SMc02469 SMc02870 SMc03161 SMc03812 SMc04129 SMc04133 SMc04138
        SMc04139 SMc04253 SMc04400
  Bme:  BMEI0020 BMEI0420 BMEI0661 BMEI1388 BMEI1710 BMEI2003 BMEII0355
        BMEII0574 BMEII0751 BMEII0865 BMEII0866 BMEII0938 BMEII1125 BMEII1126
  Mlo:  mll0280 mll1000 mll1511 mll1735 mll1882 mll2825 mll3104
        mll3311 mll3361 mll4991 mll5047 mll6645 mll7010 mll7146
        mll7219 mll9385 mlr2436 mlr3046 mlr4777 mlr4984 mlr6441_1
        mlr7229 mlr9380
  Ccr:  CC0967 CC1225 CC1296 CC1630 CC2015
_______

[C] COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
  Afu:  AF0469 AF0749_2 AF1701 AF2053
  Hbs:  VNG0474G_2 VNG1128G_2
  Mac:  MA0032 MA2910 MA3075_2
  Mth:  MTH1033 MTH1739 MTH536_2 MTH704
  Mja:  MJ0267 MJ0276
  Mka:  MK0082 MK0728
  Tac:  Ta0259m_2 Ta0628m Ta0773_2
  Tvo:  TVN0835 TVN0846_2 TVN1335_2
  Pho:  PH0680 PH0684 PH1662 PH1666
  Pab:  PAB0346 PAB1472 PAB1475 PAB2359
  Pya:  PAE0939_2 PAE1042 PAE1559_2 PAE2736_2 PAE3275
  Sso:  SSO1207 SSO2129 SSO2757 SSO2815_2
  Ape:  APE1473_2 APE2126_2
  Sce:  YFR030w_1 YJR137c_1
  Spo:  SPAC10F6.01c_1 SPCC584.01c_1
  Aae:  aq_1167 aq_1195
  Tma:  TM0017 TM0878 TM1164_2 TM1759
  Fnu:  FN1170_1 FN1421_1 FN1748 FN1749
  Cac:  CAC2229_1 CAC2459_2 CAC2499_1
  Mtu:  Rv2455c_2
  MtC:  MT2530_2
  Lla:  L29321_1
  Sau:  SA1131_2
  Lin:  lin0824_1
  Bha:  BH2374_2
  Syn:  sll0741_1
  Nos:  alr1911_1 alr2803_1
  Eco:  ydbK_1
  EcZ:  ZydbK_1
  Ecs:  ECs2000_1
  Ype:  YPO2334_1
  Sty:  STM1651_1
  Vch:  VCA0530_1
  Hpy:  HP0589 HP1110
  jHp:  jhp0537 jhp1037
  Cje:  Cj0536 Cj1476c_1
  Tpa:  TP0939_1
_______

[L] COG0675 Transposase and inactivated derivatives
  Hbs:  VNG0013C VNG0026C VNG0042G VNG0044H VNG0286C VNG2652H VNG6181H
        VNG6221H VNG6361G VNG6406H
  Mac:  MA0258 MA1009 MA1041 MA1786 MA3213 MA3361 MA3720
        MA4675
  Mja:  MJ0012m MJ0013 MJ0751 MJ0752 MJ0856.1 MJ0857 MJ1635
  Mka:  MK0605
  Tac:  Ta0028 Ta0029 Ta0381 Ta0382 Ta0475 Ta0564 Ta1471
        Ta1472
  Tvo:  TVN0006 TVN0043 TVN0248 TVN0323 TVN0468 TVN0712 TVN0713
        TVN0714 TVN0764 TVN0770 TVN0842 TVN0903 TVN0952 TVN1131
        TVN1187 TVN1222
  Pho:  PH0585 PH0630
  Pab:  PAB1452 PAB1802 PAB2077
  Pya:  PAE1076 PAE1827 PAE2522 PAE2770 PAE3530
  Sso:  SSO0008 SSO0794 SSO0797 SSO0801 SSO0842 SSO1072 SSO1182
        SSO1187 SSO1216 SSO12210 SSO1316 SSO1336 SSO1341 SSO1347
        SSO1348 SSO1366 SSO1368 SSO1475 SSO1498 SSO1504 SSO1521
        SSO1652 SSO1659 SSO1672 SSO1681 SSO1682 SSO1829 SSO1844
        SSO1916 SSO1967 SSO1974 SSO2123 SSO2124 SSO2143 SSO2144
        SSO2782 SSO2785 SSO2811 SSO2944 SSO3153 SSO3172 SSO3217
        SSO3256 SSO7675 SSO7710 SSO8288 SSO9268
  Aae:  aq_1459 aq_716 aq_aa05
  Tma:  TM0047 TM0135 TM0776 TM0970 TM1003 TM1026 TM1044
        TM1677 TM1831
  Dra:  DR0178 DR0666 DR0978 DR1381 DR1593 DR1651 DR1933
        DR2324 DR2424
  Mtu:  Rv0031 Rv0606 Rv0829 Rv0922 Rv2791c Rv2885c Rv2978c
        Rv3827c
  MtC:  MT0035 MT0949 MT2861 MT2953 MT3056 MT3935
  Syn:  slr2062
  Nos:  all0314 all0315 all1608 all1684 all3986 all4465 all4675
        all5207 all7008 all7085 all7148 all7158 all7245 all8010
        all8068 all8070 alr1157 alr1531 alr2168 alr2719 alr3372
        alr4104 alr7147 alr7153 alr7228 alr7231 alr7325 alr7329
  Eco:  ydcM
  EcZ:  Z3664 Z5816
  Ecs:  ECs3276 ECs5183
  Sty:  PSLT035 STM2599
  Xfa:  XF0536 XF1850
  Hpy:  HP0413 HP0438 HP0989 HP0997 HP1095 HP1534
  jHp:  jhp0826
  Bbu:  BBH40 BBI41
_______

[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase
  Sce:  YMR099c
  Cgl:  Cgl2277
  Eco:  yeaD
  EcZ:  ZyeaD
  Ecs:  ECs2489
  Ype:  YPO2156
  Sty:  STM1289
  Vch:  VC2001
  Pae:  PA3185 PA5422
  Hin:  HI1317
  Pmu:  PM0601 PM0711
  Xfa:  XF2270
_______

[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase
  Mth:  MTH836
  Mja:  MJ0428
  Pho:  PH0429 PH1618
  Pab:  PAB0378 PAB0776
  Pya:  PAE3281
  Tma:  TM0583
  Cac:  CAC3310
  Sau:  SA0158
  Eco:  wecC
  EcZ:  ZwecC
  Ecs:  ECs4720
  Ype:  YPO3863
  Sty:  STM3921
  Vch:  VC0918
  Pae:  PA3159
  Pmu:  PM1003
  Xfa:  XF1183
  Rso:  RSp1016
  Atu:  AGc4677
  Sme:  SMb21051 SMb21256
  Mlo:  mlr3262
_______

[O] COG0678 Peroxiredoxin
  Sce:  YLR109w
  Spo:  SPCC330.06c
  Syn:  sll1621
  Nos:  all1541_1
  Ype:  YPO3916_1
  Vch:  VC1350 VC2637_1
  Hin:  HI0572_1
  Pmu:  PM1347_1
  Nme:  NMB0946_1
  NmA:  NMA1141_1
  Rso:  RSc2838
  Atu:  AGc1423 AGc4353
  Sme:  SMc00072 SMc01834
  Bme:  BMEI1456
  Mlo:  mll5873 mll7508
  Ccr:  CC3394
_______

[R] COG0679 Predicted permeases
  Mth:  MTH1382
  Mja:  MJ1031
  Mka:  MK1560
  Sce:  YBR287w YLR152c YNL095c YOR092w
  Spo:  SPAC5D6.04
  Aae:  aq_1392
  Tma:  TM0229 TM0424
  Fnu:  FN0623
  Cac:  CAC0366 CAC2949
  Cgl:  Cgl2261 Cgl2335
  Lla:  L181807
  Sau:  SA2054
  Lin:  lin0826
  Bsu:  BS_ywkB
  Bha:  BH2670
  Syn:  slr1864
  Nos:  all2706 alr3703
  Eco:  yfdV
  EcZ:  Z3635
  Ecs:  ECs3252
  Ype:  YPO2874 YPO3791
  Vch:  VC1229 VCA0024
  Pae:  PA0188 PA1735 PA5466
  Pmu:  PM0712
  Xfa:  XF1514
  Rso:  RSc1095
  Cje:  Cj0937
  Atu:  AGc121 AGc3303
  Sme:  SMc00317 SMc01358 SMc02895
  Bme:  BMEI0560
  Mlo:  mll1169
  Ccr:  CC2524
  Rpr:  RP372 RP443
  Rco:  RC0506 RC0616
_______

[C] COG0680 Ni,Fe-hydrogenase maturation factor
  Afu:  AF1371 AF1378
  Mac:  MA0976 MA1144
  Mth:  MTH1299 MTH737
  Mja:  MJ0030 MJ0253 MJ0631
  Mka:  MK1499 MK1624
  Pho:  PH0674 PH0979
  Pab:  PAB0576 PAB0909
  Sso:  SSO1213
  Aae:  aq_667
  Cac:  CAP0143
  Syn:  slr1876
  Nos:  all0770 alr1423
  Eco:  hyaD hybD hycI
  EcZ:  ZhyaD ZhybD ZhycI
  Ecs:  ECs1131 ECs3573 ECs3878
  Sty:  STM1536 STM1789 STM2845 STM3146
  Hpy:  HP0634
  jHp:  jhp0577
  Cje:  Cj1264c
_______

[U] COG0681 Signal peptidase I
  Afu:  AF1655 AF1657 AF1791 AF2078
  Hbs:  VNG2416G
  Mac:  MA0036
  Mth:  MTH1448 MTH567
  Mja:  MJ0260
  Mka:  MK1031
  Tac:  Ta0151m Ta0378
  Tvo:  TVN0221
  Pho:  PH0563 PH0590
  Pab:  PAB0966 PAB0983
  Pya:  PAE0264
  Sso:  SSO0916
  Ape:  APE1796
  Sce:  YIR022w YMR035w YMR150c
  Spo:  SPBC1685.03 SPBC2D10.07c SPBC336.13c
  Ecu:  ECU02g0760
  Aae:  aq_955
  Tma:  TM1572
  Fnu:  FN0370
  Dra:  DR1321 DR1427 DR1737
  Cac:  CAC1760 CAC2646
  Cgl:  Cgl1987
  Mtu:  Rv2903c
  MtC:  MT2971
  Mle:  ML1612
  Lla:  L0337
  Spy:  SPy1281 SPy1842
  Spn:  SP0402
  Sau:  SA0825 SA0826
  Lin:  lin1308 lin1309 lin1310
  Bsu:  BS_sipS BS_sipT BS_sipU BS_sipV BS_sipW
  Bha:  BH1030 BH2130
  Syn:  sll0716 slr1377
  Nos:  alr2304 alr2975
  Eco:  lepB
  EcZ:  ZlepB
  Ecs:  ECs3434
  Ype:  YPO2717
  Sty:  STM2582
  Buc:  BU259
  Vch:  VC2462
  Pae:  PA0768 PA1303
  Hin:  HI0015
  Pmu:  PM0062
  Xfa:  XF2244
  Nme:  NMB0765
  NmA:  NMA0976
  Rso:  RSc1061 RSc1716
  Hpy:  HP0576
  jHp:  jhp0523
  Cje:  Cj0856
  Atu:  AGc1904
  Sme:  SMc02653
  Bme:  BMEI1288
  Mlo:  mlr7763
  Ccr:  CC1559 CC2150
  Rpr:  RP116
  Rco:  RC0156
  Ctr:  CT020
  Cpn:  CPn0110
  Tpa:  TP0185 TP0926
  Bbu:  BB0031 BB0263
  Mpu:  MYPU_6300
_______

[M] COG0682 Prolipoprotein diacylglyceryltransferase
  Aae:  aq_270
  Tma:  TM0158
  Fnu:  FN0489
  Dra:  DR0807
  Cac:  CAC0330
  Cgl:  Cgl2037
  Mtu:  Rv1614
  MtC:  MT1649
  Mle:  ML1274
  Lla:  L5776
  Spy:  SPy0585
  Spn:  SP1412
  Sau:  SA0716
  Lin:  lin2625
  Bsu:  BS_lgt
  Bha:  BH3589
  Syn:  sll1187
  Nos:  all4699
  Eco:  lgt
  EcZ:  Zlgt
  Ecs:  ECs3685
  Ype:  YPO0784
  Sty:  STM3002
  Buc:  BU439
  Vch:  VC0674
  Pae:  PA0341
  Hin:  HI0904
  Pmu:  PM0080
  Xfa:  XF2333
  Nme:  NMB1072
  NmA:  NMA1273
  Rso:  RSc2410
  Hpy:  HP0955
  jHp:  jhp0889
  Cje:  Cj0407
  Atu:  AGc4022
  Sme:  SMc02681
  Bme:  BMEI0488
  Mlo:  mlr2678
  Ccr:  CC0492
  Rpr:  RP046
  Rco:  RC0072
  Ctr:  CT252
  Cpn:  CPn0311
  Tpa:  TP0852
  Bbu:  BB0362
  Uur:  UU075
  Mpu:  MYPU_7120
  Mpn:  MPN224
  Mge:  MG086
_______

[E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
  Afu:  AF0223 AF0827 AF0962 AF1391
  Hbs:  VNG1857C
  Mja:  MJ1266
  Pya:  PAE1392 PAE2082 PAE3268 PAE3353
  Sso:  SSO2835 SSO2846
  Ape:  APE0558 APE0917 APE1303 APE2521
  Tma:  TM1135
  Fnu:  FN1432
  Dra:  DR0280 DR0788 DR1038 DR2122 DRA0263 DRA0320
  Cgl:  Cgl0906
  Spn:  SP0749
  Bha:  BH0251
  Syn:  sll0606_2 slr0447 slr0559
  Nos:  all1951 alr0344_2 alr1834 alr2535 alr4531_3 alr4531_5
  Eco:  livJ livK
  EcZ:  ZlivJ ZlivK
  Ecs:  ECs4305 ECs4309
  Ype:  YPO1187 YPO3808
  Sty:  STM3564 STM3567
  Pae:  PA1074 PA3364 PA4858 PA4913
  Rso:  RSc1750 RSc1879 RSc2041 RSc2070 RSc2244 RSc2428 RSc2441
        RSc2864 RSc3061 RSc3147 RSc3285 RSc3300 RSc3329 RSc3342
        RSp0013 RSp0539 RSp1298 RSp1447 RSp1592
  Cje:  Cj1018c Cj1019c
  Atu:  AGc2609 AGc3372 AGc4134 AGc4380 AGc4394 AGl1462 AGl702
        AGpA789 AGpA792
  Sme:  SMa0576 SMb20568 SMb20605 SMc00078 SMc00513 SMc01946 SMc02356
        SMc03121 SMc04301
  Bme:  BMEI0263 BMEI0264 BMEI0265 BMEI0708 BMEI1930 BMEII0069 BMEII0070
        BMEII0103 BMEII0122 BMEII0344 BMEII0633 BMEII0868 BMEII0875
  Mlo:  mll0086 mll0762 mll1986 mll3970 mll4889 mll7204 mlr7182
        mlr7721 mlr9034 mlr9716
_______

[H] COG0684 Demethylmenaquinone methyltransferase
  Afu:  AF0861_2
  Mac:  MA4504_2
  Mth:  MTH888
  Mja:  MJ0644
  Mka:  MK1449
  Sce:  YER010c
  Dra:  DR0859
  Cgl:  Cgl0901
  Mtu:  Rv3853
  MtC:  MT3968
  Mle:  ML0066
  Bha:  BH1938
  Eco:  menG
  EcZ:  ZmenG
  Ecs:  ECs4856
  Ype:  YPO0082 YPO0103
  Sty:  STM4089
  Vch:  VC2366 VC2672
  Pae:  PA1772
  Hin:  HI0508
  Pmu:  PM1168
  Rso:  RSc1354 RSp0944 RSp1231 RSp1233 RSp1234
  Atu:  AGl1159 AGl1765 AGpA472
  Sme:  SMb20114 SMc00502
  Mlo:  mlr2332
_______

[E] COG0685 5,10-methylenetetrahydrofolate reductase
  Mac:  MA3514
  Tac:  Ta0979
  Tvo:  TVN1125
  Pho:  PH1091
  Pab:  PAB0606
  Pya:  PAE1774
  Sso:  SSO0501
  Ape:  APE0158
  Sce:  YGL125w YPL023c
  Spo:  SPAC343.10 SPAC56F8.10
  Aae:  aq_1429
  Tma:  TM0270
  Dra:  DR0968
  Cac:  CAC0291_2
  Cgl:  Cgl2123
  Lla:  L0099
  Spn:  SP0586
  Sau:  SA0345_2
  Lin:  lin1786_2
  Bsu:  BS_yitJ_2
  Bha:  BH1629_2
  Syn:  slr2141
  Nos:  all0783
  Eco:  metF
  EcZ:  ZmetF
  Ecs:  ECs4870
  Ype:  YPO0117 YPO0287
  Sty:  STM4105
  Buc:  BU046
  Vch:  VC2685
  Pae:  PA0430
  Hin:  HI1444
  Pmu:  PM0235
  Xfa:  XF1121
  Nme:  NMB0943
  NmA:  NMA1139
  Rso:  RSc0091
  Cje:  Cj1202
  Atu:  AGc2619 AGc3241 AGc3850
  Sme:  SMa2143 SMc01843 SMc04340
  Bme:  BMEI0559
  Mlo:  mll1587 mlr1241
  Ccr:  CC2140
_______

[E] COG0686 Alanine dehydrogenase
  Dra:  DR1895
  Mtu:  Rv2780
  MtC:  MT2850
  Mle:  ML1532
  Lla:  L64332
  Sau:  SA1272 SA1531
  Lin:  lin1614
  Bsu:  BS_ald
  Bha:  BH2329 BH3180
  Syn:  sll1682
  Nos:  alr2355
  Vch:  VC1905
  Hpy:  HP1398
  jHp:  jhp1428
  Sme:  SMc01169
  Mlo:  mll0362 mll9089
  Ccr:  CC3574
_______

[E] COG0687 Spermidine/putrescine-binding periplasmic protein
  Afu:  AF1605m
  Hbs:  VNG0813G VNG1869C
  Pya:  PAE0953
  Ape:  APE0945
  Tma:  TM1375
  Fnu:  FN0618
  Dra:  DR1305
  Cac:  CAC0837
  Lla:  L178329
  Spy:  SPy1105
  Spn:  SP1386
  Sau:  SA0953
  Lin:  lin0800
  Syn:  slr0401
  Nos:  all5043 alr0299
  Eco:  potD potF ydcS
  EcZ:  Z2279 ZpotD ZpotF
  Ecs:  ECs0934 ECs1499 ECs2044
  Ype:  YPO1331 YPO2843
  Sty:  STM0877 STM1222
  Vch:  VC0704 VC1424 VC1425 VCA1113
  Pae:  PA0203 PA0222 PA0295 PA0300 PA0301 PA0323 PA0602
        PA0604 PA1410 PA2592 PA2711 PA3610 PA4985
  Hin:  HI0498 HI1344
  Pmu:  PM0260 PM0261 PM1384
  Nme:  NMB0462 NMB0623 NMB1594
  NmA:  NMA0831 NMA1786 NMA2023
  Rso:  RSc1733
  Atu:  AGc1084 AGl1237 AGl3443 AGl890 AGpA190 AGpA354 AGpA599
        AGpA613
  Sme:  SMa0392 SMa0799 SMa0950 SMa1755 SMa2209 SMb20284 SMb20383
        SMb21088 SMb21273 SMc00770 SMc00991 SMc01632 SMc01652 SMc01966
  Bme:  BMEI0411 BMEII0196 BMEII0923
  Mlo:  mll0236 mll1024 mll1741 mll2885 mll2951 mll3669 mll3670
        mll6256 mll7188 mll8444 mlr0227 mlr2023 mlr4190 mlr5381
        mlr6078 mlr6533 mlr6964 mlr6992 mlr7383 mlr7542 mlr7676
        mlr9013 mlr9377
  Ccr:  CC3137
  Tpa:  TP0655
  Bbu:  BB0639
  Uur:  UU110
  Mpu:  MYPU_4220
  Mpn:  MPN058
  Mge:  MG045
_______

[I] COG0688 Phosphatidylserine decarboxylase
  Afu:  AF2045
  Hbs:  VNG2255C
  Mac:  MA0115
  Mth:  MTH1026
  Mja:  MJ0817
  Mka:  MK0162
  Sce:  YGR170w_2 YNL169c
  Spo:  SPAC25B8.03 SPAC31G5.15_2 SPBC16E9.18
  Fnu:  FN0347
  Dra:  DR1574
  Cac:  CAC0031 CAC0799
  Mtu:  Rv0437c
  MtC:  MT0453
  Mle:  ML0311
  Bsu:  BS_psd
  Bha:  BH1311
  Eco:  psd
  EcZ:  Z5766
  Ecs:  ECs5139
  Ype:  YPO0364
  Sty:  STM4348
  Vch:  VC0339
  Pae:  PA4957
  Hin:  HI0160
  Pmu:  PM1899
  Xfa:  XF1365
  Nme:  NMB0963
  NmA:  NMA1160
  Rso:  RSc2074
  Hpy:  HP1357
  jHp:  jhp1275
  Cje:  Cj0847 Cj1115c
  Atu:  AGc1963
  Sme:  SMc00551
  Bme:  BMEI1491
  Mlo:  mlr7821
  Rpr:  RP241
  Rco:  RC0325
  Ctr:  CT699
  Cpn:  CPn0839
_______

[J] COG0689 RNase PH
  Afu:  AF0493
  Mth:  MTH683
  Mka:  MK0381
  Tac:  Ta1293
  Tvo:  TVN0307
  Pho:  PH1549
  Pab:  PAB0420
  Pya:  PAE2207
  Sso:  SSO0735
  Ape:  APE1447
  Sce:  YGR095c YGR158c YGR195w
  Spo:  SPAC3G9.10c SPBC115.01c SPBC211.08c
  Ecu:  ECU09g0830 ECU10g0270
  Aae:  aq_924
  Fnu:  FN1851_1
  Dra:  DR1585
  Cgl:  Cgl2451
  Mtu:  Rv1340
  MtC:  MT1381
  Mle:  ML1174
  Lin:  lin1201
  Bsu:  BS_rph
  Bha:  BH3068
  Nos:  alr0069
  Eco:  rph
  EcZ:  Zrph
  Ecs:  ECs4518
  Ype:  YPO0044
  Sty:  STM3734
  Vch:  VC0210
  Pae:  PA5334
  Hin:  HI0273
  Pmu:  PM1876
  Xfa:  XF1505
  Nme:  NMB1499
  NmA:  NMA1702
  Rso:  RSc2159
  Atu:  AGc571
  Sme:  SMc01144
  Bme:  BMEI1775
  Mlo:  mlr4622
  Ccr:  CC0152
  Rpr:  RP628
  Rco:  RC0975
_______

[U] COG0690 Preprotein translocase subunit SecE
  Aae:  aq_1930b
  Tma:  TM0452
  Fnu:  FN2042
  Dra:  DR2048
  Cac:  CAC3150
  Cgl:  Cgl0467
  Mtu:  Rv0638
  MtC:  MT0667
  Mle:  ML1907
  Lla:  L158071
  Spy:  SPy2058
  Spn:  SP2008
  Sau:  SA0493
  Lin:  lin0277
  Bsu:  BS_secE
  Bha:  BH0117
  Syn:  ssl3335
  Nos:  asr5298
  Eco:  secE
  EcZ:  ZsecE
  Ecs:  ECs4904
  Ype:  YPO3753
  Sty:  STM4147
  Buc:  BU040
  Vch:  VC0322
  Pae:  PA4276
  Hin:  HI0716
  Pmu:  PM1745
  Xfa:  XF2639
  Nme:  NMB0125
  NmA:  NMA0148
  Rso:  RSc3040
  Hpy:  HP1203a
  jHp:  jhp1126a
  Cje:  Cj0472
  Atu:  AGc3578
  Sme:  SMc01323
  Bme:  BMEI0743
  Mlo:  msr0269
  Ccr:  CC3206
  Rpr:  RP134
  Rco:  RC0175
  Ctr:  CT321
  Cpn:  CPn0075
  Tpa:  TP0235
  Bbu:  BB0395
  Uur:  UU580
  Mpu:  MYPU_1810
  Mpn:  MPN068
  Mge:  MG055
_______

[O] COG0691 tmRNA-binding protein
  Aae:  aq_287
  Tma:  TM0254
  Fnu:  FN0609
  Dra:  DR1468
  Cac:  CAC0716
  Cgl:  Cgl0781
  Mtu:  Rv3100c
  MtC:  MT3184
  Mle:  ML0671
  Lla:  L160560
  Spy:  SPy0504
  Spn:  SP0976
  Sau:  SA0736
  Lin:  lin2542
  Bsu:  BS_yvaI
  Bha:  BH3552
  Syn:  slr1639
  Nos:  alr5070
  Eco:  smpB
  EcZ:  ZsmpB
  Ecs:  ECs3482
  Ype:  YPO1101
  Sty:  STM2688
  Buc:  BU254
  Vch:  VC0848
  Pae:  PA4768
  Hin:  HI0981
  Pmu:  PM0217
  Xfa:  XF2348
  Nme:  NMB1526
  NmA:  NMA1726
  Rso:  RSc1424
  Hpy:  HP1444
  jHp:  jhp1337
  Cje:  Cj1105
  Atu:  AGc1885
  Sme:  SMc02405
  Bme:  BMEI1300
  Mlo:  mlr7747
  Ccr:  CC1196
  Rpr:  RP430
  Rco:  RC0596
  Ctr:  CT076
  Cpn:  CPn0337
  Tpa:  TP0184
  Bbu:  BB0033
  Uur:  UU058
  Mpu:  MYPU_3520
  Mpn:  MPN074
  Mge:  MG059
_______

[L] COG0692 Uracil DNA glycosylase
  Sce:  YML021c
  Spo:  SPCC1183.06
  Ecu:  ECU10g0530
  Fnu:  FN1226
  Dra:  DR0689
  Cgl:  Cgl1292
  Mtu:  Rv2976c
  MtC:  MT3053
  Mle:  ML1675
  Lla:  L32653
  Spy:  SPy0905
  Spn:  SP1169
  Sau:  SA0538
  Lin:  lin0408 lin1190
  Bsu:  BS_ung
  Bha:  BH3850
  Eco:  ung
  EcZ:  Zung
  Ecs:  ECs3446
  Ype:  YPO2704
  Sty:  STM2647
  Buc:  BU183
  Vch:  VC2359
  Pae:  PA0750
  Hin:  HI0018
  Pmu:  PM0065
  Xfa:  XF2692
  Nme:  NMB1222
  NmA:  NMA1384
  Rso:  RSc2887
  Hpy:  HP1347
  jHp:  jhp1266
  Cje:  Cj0086c
  Atu:  AGc4459
  Sme:  SMc03195
  Ctr:  CT607
  Cpn:  CPn0773
  Bbu:  BB0053
  Uur:  UU548
  Mpu:  MYPU_6150
  Mpn:  MPN235
  Mge:  MG097
_______

[R] COG0693 Putative intracellular protease/amidase
  Afu:  AF1281
  Hbs:  VNG0557H VNG2554H
  Mac:  MA1654 MA2531 MA2741
  Mja:  MJ0967
  Mka:  MK0409 MK1129
  Tac:  Ta0465
  Tvo:  TVN0424
  Pho:  PH1704
  Pab:  PAB0311
  Pya:  PAE0267 PAE1683
  Sso:  SSO1067
  Ape:  APE0319
  Sce:  YDR533c YMR322c YOR391c YPL280w
  Spo:  SPAC11D3.13 SPAC1F7.06 SPAC22E12.03c SPAC5H10.02c SPBC947.09 SPCC757.03c
  Aae:  aq_618
  Fnu:  FN1085 FN1876
  Dra:  DR0491 DR1199
  Cac:  CAC0991 CAC1629 CAC2826 CAC3350
  Mtu:  Rv0052 Rv1930c Rv1931c_1
  MtC:  MT0058 MT1980.2 MT1981_1
  Spn:  SP0804
  Sau:  SA0509 SA1692
  Lin:  lin0465 lin2358
  Bsu:  BS_ydeA BS_yfkM BS_yoaZ BS_yraA
  Bha:  BH3025
  Syn:  slr1854
  Nos:  all7521 alr0893 alr8073
  Eco:  thiJ yedU yhbO
  EcZ:  ZthiJ ZyedU ZyhbO
  Ecs:  ECs0478 ECs2705 ECs4034
  Ype:  YPO0845 YPO3172
  Sty:  STM0433 STM1931 STM3269
  Vch:  VC2308 VCA0455
  Pae:  PA0355 PA1135 PA2719 PA4171 PA4336
  Pmu:  PM1504
  Xfa:  XF1137
  Rso:  RSc0416 RSc1802
  Cje:  Cj0899c
  Atu:  AGc1616 AGl1155 AGl1156 AGl1423 AGl853
  Sme:  SMa0275 SMa0341 SMa1968 SMa1969 SMb20212
  Bme:  BMEI0793 BMEII1016
  Mlo:  mll3224 mlr3762 mlr4512 mlr5196 mlr5723
  Ccr:  CC0208 CC1779 CC1780 CC2182 CC2959
  Tpa:  TP0445
  Bbu:  BB0621
  Mpu:  MYPU_4750
  Mpn:  MPN032 MPN294
  Mge:  MG029
_______

[O] COG0694 Thioredoxin-like proteins and domains
  Afu:  AF0632
  Hbs:  VNG2337C VNG2628H
  Sce:  YKL040c
  Spo:  SPBC1709.19c
  Sau:  SA0797
  Lin:  lin2496
  Bsu:  BS_yutI
  Bha:  BH3419
  Syn:  ssl2667
  Nos:  all1456_2 alr0692 asr1309
  Eco:  yhgI_2
  EcZ:  ZyhgI_2
  Ecs:  ECs4256_2
  Ype:  YPO0127_2
  Sty:  STM3511_2
  Buc:  BU544_2
  Vch:  VC2720_2
  Pae:  PA1847_2
  Hin:  HI0433_2
  Pmu:  PM1557_2
  Xfa:  XF2603_2
  Hpy:  HP0221_2 HP1492
  jHp:  jhp0207_2 jhp1385
  Cje:  Cj0239c_2 Cj1639
  Atu:  AGc616
  Sme:  SMc01119
  Bme:  BMEI1808
  Mlo:  mll5315
  Ccr:  CC0062
  Rpr:  RP667
  Rco:  RC1018
  Ctr:  CT720_2
  Cpn:  CPn0861_2
_______

[O] COG0695 Glutaredoxin and related proteins
  Afu:  AF1536
  Hbs:  VNG1012H VNG1546H VNG2115H VNG2310H
  Mac:  MA1658
  Mth:  MTH1577
  Sce:  YBR014c YCL035c YDL010w YDR513w YLR364w YPL156c
  Spo:  SPAC15E1.09 SPAC4F10.20 SPCC1450.06c
  Ecu:  ECU08g1380 ECU09g1375
  Tma:  TM1031
  Dra:  DR2085 DRA0072
  Cac:  CAC2777
  Cgl:  Cgl0819 Cgl2480
  Mtu:  Rv3053c
  MtC:  MT3139 MT3292
  Mle:  ML1736
  Lla:  L5126
  Spy:  SPy1374
  Spn:  SP1178
  Sau:  SA0936
  Lin:  lin2438
  Bsu:  BS_ytnI
  Syn:  slr1562 ssr2061
  Nos:  all1541_2 all4873 asl3860
  Eco:  grxA grxC nrdH
  EcZ:  ZgrxA ZgrxC ZnrdH
  Ecs:  ECs0929 ECs3536 ECs4488
  Ype:  YPO0066 YPO1327 YPO2651 YPO3916_2
  Sty:  STM0872 STM2805 STM3702
  Vch:  VC1146 VC1616 VC2637_2 VCA1011_2
  Pae:  PA1741 PA5129
  Hin:  HI0572_2 HI1532
  Pmu:  PM0827 PM1347_2
  Xfa:  XF2595
  Nme:  NMB0946_2 NMB1790
  NmA:  NMA0673 NMA1141_2
  Rso:  RSc0355
  Atu:  AGc102 AGl2634
  Sme:  SMa0280 SMc02443
  Bme:  BMEI0184 BMEII0932
  Mlo:  msl3452
  Ccr:  CC0829 CC2727
  Rpr:  RP204
  Rco:  RC0267
_______

[G] COG0696 Phosphoglyceromutase
  Hbs:  VNG1887G
  Mac:  MA2671 MA3365 MA4007
  Ecu:  ECU10g1060
  Cac:  CAC0712
  Sau:  SA0730
  Lin:  lin2550
  Bsu:  BS_pgm
  Bha:  BH3557
  Syn:  slr1945
  Nos:  all4182
  Eco:  gpmI
  EcZ:  ZyibO
  Ecs:  ECs4490
  Ype:  YPO0064
  Sty:  STM3704
  Vch:  VC0336
  Pae:  PA5131
  Hpy:  HP0974
  jHp:  jhp0908
  Cje:  Cj0434
  Atu:  AGl2721
  Uur:  UU182
  Mpu:  MYPU_4590
  Mpn:  MPN628
  Mge:  MG430
_______

[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily
  Afu:  AF0266 AF0510 AF0788 AF1223 AF1533 AF1552 AF1691
  Hbs:  VNG1350C VNG1626C VNG6293C
  Mac:  MA0530 MA0780 MA0929 MA1666 MA1667 MA3243 MA3489
  Mth:  MTH841
  Tac:  Ta0015 Ta0221 Ta1008 Ta1470 Ta1494
  Tvo:  TVN0748 TVN1373 TVN1496
  Pho:  PH0070 PH0593 PH0613 PH0950 PH1489 PH1729
  Pab:  PAB0040 PAB0285 PAB0461 PAB1426 PAB1796 PAB2381
  Pya:  PAE0876 PAE1328 PAE1367 PAE1368 PAE1372 PAE1545 PAE3209
        PAE3521
  Sso:  SSO11920 SSO1880 SSO2868 SSO3074
  Ape:  APE0076 APE0965 APE1345 APE2537
  Sce:  YDR438w YML018c YML038c YMR253c YPL244c YPL264c
  Spo:  SPAC12G12.12 SPAC22E12.01 SPBC405.03c SPBC839.11c SPCC1795.03 SPCC320.08
  Ecu:  ECU04g0570 ECU06g1290
  Aae:  aq_1741 aq_246
  Tma:  TM0586 TM0728 TM1017 TM1722 TM1787
  Fnu:  FN0354 FN0395 FN0674 FN1038 FN1236 FN1465 FN1477
        FN1498 FN1669 FN1744 FN1806 FN2101
  Dra:  DR0135 DR0512 DR2393 DR2437
  Cac:  CAC0076 CAC0875 CAC1045 CAC1074 CAC1538 CAC1984 CAC2501
        CAC2502 CAC2782
  Cgl:  Cgl0251
  Mtu:  Rv2729c
  MtC:  MT2801
  Lla:  L106608 L124727
  Spn:  SP1268 SP1447 SP2098
  Sau:  SA0103 SA0684 SA2322
  Lin:  lin0496
  Bsu:  BS_ybfH BS_ycbK BS_ycxC BS_ydeD BS_ydeK BS_ydfC BS_ydzE
        BS_yetK BS_yoaV BS_yrdR BS_yvbV BS_ywfM BS_yxxF BS_yyaM
  Bha:  BH0390 BH0396 BH0725 BH1741 BH1931 BH1937 BH2177
        BH2747 BH3687
  Syn:  sll0355 sll1164 sll1319 slr0521
  Nos:  all1189 all3551 alr1538 alr2338_2 alr3508 alr4758
  Eco:  rhaT yddG ydeD yedA yfbJ yhbE yicL
        yigM yijE ytfF
  EcZ:  Z3516 Z3517 ZrhaT ZyddG ZydeD ZyedA ZyhbE
        ZyicL ZyigM ZyijE ZytfF
  Ecs:  ECs2077 ECs2140 ECs2697 ECs3146 ECs4063 ECs4594 ECs4757
        ECs4872 ECs5188
  Ype:  YPO0334 YPO1170 YPO1203 YPO1348 YPO2151 YPO2416 YPO2417
        YPO2455 YPO2761 YPO3413 YPO3510 YPO3790
  Sty:  STM1517 STM1571 STM1862 STM1990 STM2302 STM2303 STM3765
        STM3796A STM3963 STM4050 STM4395 STM4400
  Buc:  BU281
  Vch:  VC0075 VC0081 VC0337 VC1656 VC2032 VC2566 VCA0090
        VCA0599 VCA0835 VCA0963 VCA1010
  Pae:  PA0239 PA0539 PA1060 PA1265 PA1411 PA1977 PA2101
        PA2576 PA2628 PA2712 PA3222 PA3358 PA3474 PA3557
        PA3558 PA3605 PA3897 PA4287 PA4779 PA4783 PA4834
  Hin:  HI0687 HI0878 HI0976 HI0976.1 HI1538
  Pmu:  PM0349 PM0350 PM0461 PM1049 PM1475 PM1698
  Xfa:  XF0250 XF2573
  Nme:  NMB0444 NMB0764 NMB1459 NMB1593
  NmA:  NMA0975 NMA1671 NMA1785 NMA2041
  Rso:  RSc0151 RSc0233 RSc0519 RSc0614 RSc0987 RSc1002 RSc1323
        RSc1395 RSc1428 RSc1607 RSc1953 RSc2109 RSc2187 RSc2225
        RSc2507 RSc3261 RSp0133 RSp0685 RSp0710 RSp0821 RSp1044
        RSp1638
  Hpy:  HP1234
  jHp:  jhp1155
  Cje:  Cj0385c Cj0860 Cj1544c
  Atu:  AGc1807 AGc1820 AGc2304 AGc2648 AGc2870 AGc3116 AGc3255
        AGc3265 AGc3419 AGc357 AGc3767 AGc394 AGc3999 AGc4240
        AGc4246 AGc4446 AGc468 AGc664 AGl1409 AGl1685 AGl1699
        AGl2619 AGl451 AGpA485
  Sme:  SMa1945 SMb20040 SMb20112 SMb20705 SMb20716 SMb20885 SMc00197
        SMc00381 SMc00424 SMc00428 SMc00642 SMc00706 SMc01584 SMc01729
        SMc01763 SMc01807 SMc01844 SMc01970 SMc02371 SMc02511 SMc02817
        SMc02855 SMc03134
  Bme:  BMEI0170 BMEI0187 BMEI0506 BMEI0982 BMEI1244 BMEI1323 BMEII0439
        BMEII0551 BMEII0614 BMEII0677 BMEII1008
  Mlo:  mll0262 mll1137 mll1264 mll2462 mll2586 mll2749 mll3062
        mll3447 mll3550 mll4580 mll7827 mll7828 mll8218 mll8362
        mlr0335 mlr0545 mlr0868 mlr1585 mlr2632 mlr3480 mlr3516
        mlr3874 mlr3911 mlr5160 mlr5305 mlr5337 mlr5364 mlr6530
        mlr7703 mlr7896 mlr7925 mlr8275 mlr9715
  Ccr:  CC0093 CC0848 CC1542 CC1578 CC2568 CC3033 CC3090
        CC3670
  Rpr:  RP076
  Rco:  RC0106
  Ctr:  CT034 CT580
  Cpn:  CPn0127 CPn0807
  Tpa:  TP0986
_______

[G] COG0698 Ribose 5-phosphate isomerase RpiB
  Aae:  aq_1138
  Tma:  TM1080
  Fnu:  FN1874
  Cac:  CAC0726 CAC2606 CAC2880 CAC2953 CAC2954
  Cgl:  Cgl2369
  Mtu:  Rv2465c
  MtC:  MT2540
  Mle:  ML1484
  Spy:  SPy0637 SPy1707 SPy1708 SPy1922 SPy1923
  Spn:  SP0319 SP1192 SP1193
  Sau:  SA1996 SA1997
  Lin:  lin0363 lin0498 lin2811 lin2821
  Bsu:  BS_ywlF
  Bha:  BH3767
  Syn:  ssl2153
  Eco:  rpiB
  Ype:  YPO1991 YPO3353
  Sty:  STM1933
  Pmu:  PM1645
  Hpy:  HP0574
  jHp:  jhp0521
  Cje:  Cj0925
  Sme:  SMb20371 SMc01613
  Bme:  BMEII0424
  Mlo:  msr7277
  Rpr:  RP299
  Rco:  RC0402
  Uur:  UU006
  Mpu:  MYPU_6120
  Mpn:  MPN595
  Mge:  MG396
_______

[R] COG0699 Predicted GTPases (dynamin-related)
  Sce:  YBR179c YKR001c YLL001w YOR211c
  Spo:  SPAC767.01c SPAC9G1.14c SPBC12C2.08 SPBC1706.03 SPBC1718.06
  Ecu:  ECU01g1210 ECU10g1700i
  Dra:  DR1235
  Mtu:  Rv0342 Rv0343
  MtC:  MT0357 MT0357.1
  Sau:  SA1274
  Bsu:  BS_ypbR_1 BS_ypbR_3
  Bha:  BH1700
  Syn:  slr0179 slr0869
  Nos:  all3927 all4413_1 all4414 alr1785
  Eco:  yjdA_1
  EcZ:  Z1212_1 Z1652_1 ZyjdA_1
  Ecs:  ECs1397_1 ECs5091_1
  Pae:  PA0391
  Rso:  RSc0400
  Hpy:  HP0963 HP0965 HP0966
  jHp:  jhp0896 jhp0897 jhp0899 jhp0900 jhp0901
  Cje:  Cj0411_1 Cj0412_1
_______

[S] COG0700 Uncharacterized membrane protein
  Cac:  CAC0470
  Bsu:  BS_spmB
  Bha:  BH1575
  Syn:  sll1678
  Eco:  yjiG
  EcZ:  ZyjiG
  Ecs:  ECs5287
  Sty:  STM4513
  Vch:  VCA1012
  Pae:  PA5478_2
  Rso:  RSc0452_2
_______

[R] COG0701 Predicted permeases
  Afu:  AF2247
  Mac:  MA0366 MA3937 MA3941 MA4345
  Mth:  MTH894
  Mja:  MJ0584
  Mka:  MK1407
  Aae:  aq_1388
  Tma:  TM0997
  Cac:  CAC1592
  Mtu:  Rv2963
  MtC:  MT3039
  Spy:  SPy0576
  Spn:  SP0905
  Lin:  lin0921
  Bsu:  BS_ycgR
  Bha:  BH1518
  Syn:  sll0932 slr1547
  Nos:  all1509 alr3361
  Eco:  yraQ
  EcZ:  ZyraQ
  Ecs:  ECs4032
  Cje:  Cj1560
_______

[MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases
  Hbs:  VNG0814C VNG1932G VNG2488C
  Sce:  YER004w YLR290c YMR090w
  Spo:  SPBC216.03 SPCC1840.09
  Aae:  aq_135
  Dra:  DR0011 DR1980
  Cgl:  Cgl0612 Cgl1024 Cgl1338 Cgl1506 Cgl2987
  Lla:  L119013 L29875
  Sau:  SA0381 SA1946 SA2362
  Lin:  lin0459 lin2490
  Bsu:  BS_yesF BS_yheG BS_yhfK
  Bha:  BH0305 BH1520
  Syn:  sll0096 sll1218 slr0317 slr0399
  Nos:  all2598 all4752 all4874 all5026 all5305 alr2751 alr2903
  Eco:  ybjT yraR ytfG
  EcZ:  Z2446 ZchuY ZybjT ZyraR ZytfG
  Ecs:  ECs0955 ECs1906 ECs4033 ECs4385 ECs5190
  Ype:  YPO0284 YPO1356 YPO1645 YPO3466
  Sty:  STM0933 STM3268 STM4401
  Vch:  VC1632
  Pae:  PA0333 PA4017
  Hin:  HI0742
  Xfa:  XF0241 XF1747
  Rso:  RSc0087 RSc0169 RSc2520 RSp0844
  Atu:  AGc1732 AGc511 AGl1126 AGl642GM
  Sme:  SMa1606 SMa1957 SMa2095 SMa2109 SMb20415 SMb20701 SMb20865
        SMc00410 SMc01405
  Bme:  BMEII0259
  Mlo:  mll1871 mll1990 mll5193 mll6687 mll7059 mll7605 mlr0033
        mlr0239 mlr0241 mlr0977 mlr1271 mlr1414 mlr1895 mlr3941
        mlr7972
  Ccr:  CC1164 CC2899 CC3370 CC3604
_______

[E] COG0703 Shikimate kinase
  Mac:  MA3237
  Sce:  YDR127w_3
  Spo:  SPAC1834.02_3
  Aae:  aq_2177
  Tma:  TM0348_1
  Fnu:  FN0822
  Dra:  DR0776
  Cac:  CAC0898
  Cgl:  Cgl1584
  Mtu:  Rv2539c
  MtC:  MT2614
  Mle:  ML0517
  Lla:  L0056
  Spy:  SPy1351
  Spn:  SP1370
  Sau:  SA1368
  Lin:  lin1861
  Bsu:  BS_aroI
  Bha:  BH0500
  Syn:  sll1669
  Nos:  alr1244
  Eco:  aroKm aroL
  EcZ:  ZaroK ZaroL
  Ecs:  ECs0438 ECs4232
  Ype:  YPO0151 YPO3215
  Sty:  STM0388 STM3487
  Buc:  BU539
  Vch:  VC2629
  Pae:  PA5039
  Hin:  HI0207
  Pmu:  PM1224
  Xfa:  XF1335
  Nme:  NMB1813
  NmA:  NMA0648
  Rso:  RSc2970
  Hpy:  HP0157
  jHp:  jhp0145
  Cje:  Cj0387
  Atu:  AGl2400
  Sme:  SMc00695
  Bme:  BMEI0042
  Mlo:  mll3573 mlr6331_2 mlr6361_3
  Ccr:  CC3008
  Ctr:  CT367
  Cpn:  CPn1038
_______

[P] COG0704 Phosphate uptake regulator
  Afu:  AF0472 AF0794 AF1355 AF1360 AF1797
  Hbs:  VNG0451G VNG0458G VNG0766G VNG2480Hm
  Mac:  MA0866 MA0891 MA1380 MA2346 MA3088 MA3104
  Mth:  MTH1724 MTH1732 MTH1734
  Mja:  MJ1009 MJ1011 MJ1641
  Mka:  MK0862
  Tac:  Ta0110 Ta0466
  Tvo:  TVN0183 TVN0966
  Pho:  PH0231
  Pab:  PAB0144 PAB0701 PAB0702
  Pya:  PAE1386 PAE2019 PAE2220
  Sso:  SSO0356 SSO0618 SSO0923 SSO2620
  Ape:  APE0051 APE0473 APE2084
  Aae:  aq_906
  Tma:  TM1260 TM1734
  Dra:  DR2053 DR2243 DRA0161
  Cac:  CAC1709
  Cgl:  Cgl2517
  Mtu:  Rv0821c Rv3301c
  MtC:  MT0843 MT3400
  Mle:  ML2188
  Lla:  L153665
  Spy:  SPy1240
  Spn:  SP1395 SP1830 SP2088
  Sau:  SA1217
  Lin:  lin2637
  Bha:  BH2990
  Syn:  slr0741
  Nos:  all4501
  Eco:  phoU
  EcZ:  ZphoU
  Ecs:  ECs4660
  Ype:  YPO4113
  Sty:  STM3853
  Vch:  VC0727
  Pae:  PA5365
  Xfa:  XF2145
  Rso:  RSc1533
  Atu:  AGc744
  Sme:  SMc02141
  Bme:  BMEI1985
  Mlo:  mll3718 mlr5643
  Ccr:  CC0293
  Bbu:  BB0042
  Uur:  UU201
  Mpn:  MPN608
  Mge:  MG409
_______

[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)
  Afu:  AF1011_2
  Hbs:  VNG0361C_2
  Mac:  MA3859
  Mja:  MJ0610.1
  Mka:  MK0052
  Tac:  Ta0726
  Pho:  PH1497
  Pab:  PAB1920
  Pya:  PAE1099 PAE1124
  Sso:  SSO0463
  Ape:  APE1877
  Sce:  YGR101w YPL246c
  Spo:  SPBC13E7.11 SPBP4H10.10 SPCC1235.08c SPCC790.03
  Aae:  aq_1327
  Tma:  TM0584 TM1087
  Dra:  DR1992
  Cac:  CAC0954
  Cgl:  Cgl0035 Cgl2462
  Mtu:  Rv0110 Rv1337
  MtC:  MT0119 MT1378
  Mle:  ML1171
  Lla:  L173329
  Spy:  SPy0223
  Spn:  SP2094
  Sau:  SA1379_1
  Lin:  lin1374_1
  Bsu:  BS_ydcA BS_yqgP_1
  Bha:  BH0517 BH1421_1
  Syn:  slr1461
  Nos:  alr3774 alr3931 alr4837
  Eco:  glpG
  EcZ:  ZglpG
  Ecs:  ECs4267
  Ype:  YPO0121
  Sty:  STM3524
  Vch:  VC0099 VC1981
  Pae:  PA3086
  Hin:  HI0618
  Pmu:  PM1438
  Xfa:  XF0649 XF1054 XF2186
  Rso:  RSc2655 RSp0998 RSp1525
  Cje:  Cj1003c
  Atu:  AGc3218 AGl2465
  Sme:  SMc00730 SMc01001
  Bme:  BMEI0739
  Mlo:  mlr0187 mlr3486
  Ccr:  CC2627
  Tpa:  TP0982
_______

[U] COG0706 Preprotein translocase subunit YidC
  Sce:  YER154w YGR062c
  Spo:  SPAC9G1.04 SPBC1346.02c SPCC1442.15c
  Aae:  aq_175
  Tma:  TM1461
  Fnu:  FN0004
  Dra:  DR2149
  Cac:  CAC3736
  Cgl:  Cgl2875 Cgl3037
  Mtu:  Rv3921c
  MtC:  MT4040
  Mle:  ML2710
  Lla:  L131778 L164312
  Spy:  SPy0247 SPy0351
  Spn:  SP1975 SP2041
  Sau:  SA1893
  Lin:  lin1416 lin2986
  Bsu:  BS_spoIIIJ BS_yqjG
  Bha:  BH1169 BH4064
  Syn:  slr1471
  Nos:  alr3415
  Eco:  yidC
  EcZ:  ZyidC
  Ecs:  ECs4640
  Ype:  YPO4102
  Sty:  STM3842
  Buc:  BU015
  Vch:  VC0004
  Pae:  PA5568
  Hin:  HI1001
  Pmu:  PM1165
  Xfa:  XF2780
  Nme:  NMB1907
  NmA:  NMA0548
  Rso:  RSc0004
  Hpy:  HP1450
  jHp:  jhp1343
  Cje:  Cj0958c
  Atu:  AGc674
  Sme:  SMc01721
  Bme:  BMEII0275
  Mlo:  mlr4812
  Ccr:  CC0767
  Rpr:  RP048
  Rco:  RC0074
  Ctr:  CT251
  Cpn:  CPn0310
  Tpa:  TP0949
  Bbu:  BB0442
  Uur:  UU602
  Mpu:  MYPU_1520
  Mpn:  MPN680
  Mge:  MG464
_______

[M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
  Mac:  MA2171
  Mka:  MK0372
  Sso:  SSO2485
  Aae:  aq_1177
  Tma:  TM0232
  Fnu:  FN1457
  Dra:  DR0626 DR1076
  Cac:  CAC2231 CAC2897
  Cgl:  Cgl2108
  Mtu:  Rv2153c
  MtC:  MT2212
  Mle:  ML0914
  Lla:  L0238
  Spy:  SPy1524
  Spn:  SP0689
  Sau:  SA0875 SA1251
  Lin:  lin2141
  Bsu:  BS_murG BS_ykoN BS_ypfP
  Bha:  BH1957 BH2565
  Syn:  slr1656
  Nos:  all2287 alr0477
  Eco:  murG
  EcZ:  ZmurG
  Ecs:  ECs0094
  Ype:  YPO0555
  Sty:  STM0128
  Buc:  BU216
  Vch:  VC2401
  Pae:  PA4412
  Hin:  HI1138
  Pmu:  PM0142
  Xfa:  XF0797
  Nme:  NMB0422
  NmA:  NMA2062
  Rso:  RSc2844
  Hpy:  HP1155
  jHp:  jhp1082
  Cje:  Cj1039
  Atu:  AGc3798
  Sme:  SMc01866
  Bme:  BMEI0579
  Mlo:  mll1554
  Ccr:  CC2551
  Rpr:  RP412
  Rco:  RC0562
  Ctr:  CT761
  Cpn:  CPn0904
  Tpa:  TP0523
  Bbu:  BB0767
_______

[L] COG0708 Exonuclease III
  Afu:  AF0580
  Mac:  MA2077
  Mth:  MTH212
  Tac:  Ta1506m
  Tvo:  TVN0046
  Sso:  SSO2290
  Sce:  YBL019w_1
  Spo:  SPBC3D6.10
  Ecu:  ECU06g1360
  Fnu:  FN0047
  Dra:  DR0354
  Cac:  CAC0222
  Cgl:  Cgl0651 Cgl2684
  Mtu:  Rv0427c
  MtC:  MT0442
  Lla:  L198056
  Spy:  SPy0412
  Spn:  SP1845
  Lin:  lin1894
  Bsu:  BS_exoA
  Syn:  sll1854
  Nos:  all5306
  Eco:  xthA
  EcZ:  ZxthA
  Ecs:  ECs2455
  Ype:  YPO2168
  Sty:  STM1302
  Vch:  VC1860
  Pae:  PA2545 PA4172 PA5332
  Hin:  HI0041
  Pmu:  PM0691
  Xfa:  XF0164 XF1933
  Nme:  NMB0399 NMB2082
  NmA:  NMA0348 NMA2086
  Rso:  RSc0140 RSc1593
  Hpy:  HP1526
  jHp:  jhp1415
  Cje:  Cj0255c
  Atu:  AGc3151 AGc5007 AGpA63
  Sme:  SMb20689 SMc00956 SMc02077 SMc03818
  Bme:  BMEI0068 BMEI1093
  Mlo:  mll2070 mll4241 mlr1096
  Ccr:  CC2011 CC3706
  Rpr:  RP260 RP676
  Rco:  RC0346 RC1028
  Tpa:  TP0125
  Bbu:  BB0534
_______

[E] COG0709 Selenophosphate synthase
  Mja:  MJ1591m
  Mka:  MK1369
  Pya:  PAE2603_1
  Sso:  SSO2635
  Aae:  aq_1030
  Eco:  selD
  EcZ:  ZselD
  Ecs:  ECs2470
  Ype:  YPO2164
  Sty:  STM1297
  Pae:  PA1642
  Hin:  HI0200m
  Pmu:  PM0790
  Cje:  Cj1504c
  Sme:  SMa0028
_______

[E] COG0710 3-dehydroquinate dehydratase
  Afu:  AF0228
  Hbs:  VNG0314G
  Mac:  MA4593
  Mth:  MTH566
  Mja:  MJ1454
  Mka:  MK0429
  Tac:  Ta0116
  Tvo:  TVN0194
  Pab:  PAB0299
  Pya:  PAE1960_1
  Sso:  SSO0311
  Sce:  YDR127w_4
  Spo:  SPAC1834.02_4
  Aae:  aq_021
  Lla:  L0062
  Spy:  SPy0809
  Spn:  SP1377
  Sau:  SA0756
  Lin:  lin0494
  Bsu:  BS_aroC
  Eco:  aroD
  EcZ:  ZaroD
  Ecs:  ECs2400
  Sty:  STM1358
  Nme:  NMB1446
  NmA:  NMA1659
  Ctr:  CT370_1
  Cpn:  CPn1035_1
_______

[C] COG0711 F0F1-type ATP synthase, subunit b
  Mac:  MA2435
  Aae:  aq_1586 aq_1587
  Tma:  TM1614
  Fnu:  FN0362
  Cac:  CAC2869
  Cgl:  Cgl1181
  Mtu:  Rv1306 Rv1307_1
  MtC:  MT1346 MT1347_1
  Mle:  ML1141 ML1142_1
  Lla:  L11208
  Spy:  SPy0756
  Spn:  SP1512
  Sau:  SA1909
  Lin:  lin2677
  Bsu:  BS_atpF
  Bha:  BH3758
  Syn:  sll1323 sll1324
  Nos:  all0007 all0008
  Eco:  atpF
  EcZ:  ZatpF
  Ecs:  ECs4678
  Ype:  YPO4125
  Sty:  STM3869
  Buc:  BU004
  Vch:  VC2768
  Pae:  PA5558
  Hin:  HI0483
  Pmu:  PM1490
  Xfa:  XF1147
  Nme:  NMB1938
  NmA:  NMA0515
  Rso:  RSc3321
  Hpy:  HP1136 HP1137
  jHp:  jhp1064 jhp1065
  Cje:  Cj0102 Cj0103
  Atu:  AGc1299 AGc1301
  Sme:  SMc00868 SMc00869
  Bme:  BMEI1543 BMEI1544
  Mlo:  mlr7413 mlr7415
  Ccr:  CC0365 CC0366
  Rpr:  RP020 RP021
  Rco:  RC0024 RC0025
  Uur:  UU135
  Mpu:  MYPU_2700
  Mpn:  MPN602
  Mge:  MG403
_______

[C] COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
  Sce:  YDR298c
  Spo:  SPCC1840.06
  Aae:  aq_1588
  Tma:  TM1613
  Fnu:  FN0361
  Cac:  CAC2868
  Cgl:  Cgl1182
  Mtu:  Rv1307_2
  MtC:  MT1347_2
  Mle:  ML1142_2
  Lla:  L10679
  Spy:  SPy0757
  Spn:  SP1511
  Sau:  SA1908
  Lin:  lin2676
  Bsu:  BS_atpH
  Bha:  BH3757
  Syn:  sll1325
  Nos:  all0006
  Eco:  atpH
  EcZ:  ZatpH
  Ecs:  ECs4677
  Ype:  YPO4124
  Sty:  STM3868
  Buc:  BU005
  Vch:  VC2767
  Pae:  PA5557
  Hin:  HI0482
  Pmu:  PM1491
  Xfa:  XF1146
  Nme:  NMB1937
  NmA:  NMA0516
  Rso:  RSc3320
  Hpy:  HP1135
  jHp:  jhp1063
  Cje:  Cj0104
  Atu:  AGc4759
  Sme:  SMc02498
  Bme:  BMEI0248
  Mlo:  mll4066
  Ccr:  CC3450
  Rpr:  RP804
  Rco:  RC1238
  Uur:  UU133 UU134
  Mpu:  MYPU_2690
  Mpn:  MPN601
  Mge:  MG402
_______

[C] COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)
  Hbs:  VNG0643G
  Mac:  MA1503
  Tac:  Ta0962
  Tvo:  TVN1108
  Ape:  APE1417
  Aae:  aq_1319 aq_1378
  Dra:  DR1495
  Mtu:  Rv3155
  MtC:  MT3243
  Syn:  sll0522
  Nos:  alr0226
  Eco:  nuoK
  EcZ:  ZnuoK
  Ecs:  ECs3163
  Ype:  YPO2546
  Sty:  STM2319
  Buc:  BU163
  Pae:  PA2646
  Xfa:  XF0315
  Nme:  NMB0254
  NmA:  NMA0005
  Rso:  RSc2052
  Hpy:  HP1270
  jHp:  jhp1191
  Cje:  Cj1569c
  Atu:  AGc2359
  Sme:  SMa1544 SMc01924
  Bme:  BMEI1148
  Mlo:  mll1357
  Ccr:  CC1940
  Rpr:  RP791
  Rco:  RC1225
_______

[R] COG0714 MoxR-like ATPases
  Afu:  AF2425
  Hbs:  VNG0223G VNG6032G VNG6244G VNG7027
  Mac:  MA0254 MA2200 MA2842 MA3148
  Mth:  MTH1814
  Mja:  MJ0079 MJ0812
  Mka:  MK0478
  Tac:  Ta0920
  Tvo:  TVN1065
  Pho:  PH0329 PH0385 PH0776
  Pab:  PAB0848 PAB1276 PAB1296
  Pya:  PAE0090 PAE2039 PAE2240 PAE2901
  Sso:  SSO2363
  Ape:  APE0127 APE0372 APE0892 APE1035 APE1317 APE2220
  Aae:  aq_2011_2 aq_240
  Tma:  TM0930 TM1132
  Dra:  DR0621 DR0918 DR1171
  Cac:  CAC1858
  Cgl:  Cgl1712
  Mtu:  Rv0370c Rv1479 Rv2426c Rv3164c Rv3692
  MtC:  MT0385 MT1526 MT2499 MT3253 MT3794
  Mle:  ML1810
  Sau:  SA1241
  Lin:  lin0471
  Bsu:  BS_yeaC BS_yojN
  Bha:  BH0604 BH0731
  Syn:  slr0835 slr1416
  Nos:  all2251 alr3491 alr4849 alr5034
  Eco:  yehL yieN
  EcZ:  ZyehL ZyieN
  Ecs:  ECs2927 ECs4688
  Ype:  YPMT1.88 YPO0005
  Sty:  STM3879
  Vch:  VCA0175 VCA0763
  Pae:  PA0520 PA2707 PA2875 PA3070 PA4322
  Xfa:  XF1813
  Rso:  RSc0998 RSc1466 RSp0109
  Atu:  AGc4098 AGl2407 AGl958
  Sme:  SMa1272 SMc00515 SMc00700 SMc02703
  Bme:  BMEI0049 BMEI0460 BMEII0997
  Mlo:  mll3563 mll8333 mlr0088 mlr1705 mlr2730 mlr3956
  Ccr:  CC0566 CC1455 CC2826 CC3021
  Bbu:  BB0176
_______

[P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
  Afu:  AF0088 AF0640
  Mac:  MA0065
  Mja:  MJ1181
  Mka:  MK0601
  Sce:  YDL244w YFL058w YJR156c YNL332w
  Spo:  SPCC1223.02
  Tma:  TM0202 TM0484
  Fnu:  FN0236
  Dra:  DR0268 DR1277 DR1655
  Cac:  CAC0106 CAC0620 CAC1400
  Cgl:  Cgl1195 Cgl1246 Cgl1257
  Spn:  SP2197
  Sau:  SA0167
  Bsu:  BS_ssuA BS_ytlA BS_ytlB
  Bha:  BH1209 BH2682
  Syn:  sll0473 sll1080 sll1450 sll1452_2 slr0040 slr0043_2
  Nos:  all3333 alr0608 alr0610_2 alr2877 alr2879_2
  Eco:  ssuA
  EcZ:  ZycbO
  Ecs:  ECs1019
  Ype:  YPMT1.42 YPO2286 YPO3624
  Vch:  VC1369
  Pae:  PA0186 PA1786 PA2296 PA2309 PA2328 PA2594 PA2595
        PA2596 PA2599 PA3445 PA3449 PA3513
  Hin:  HI0357
  Pmu:  PM1263
  Rso:  RSc0381 RSc1198 RSc1338 RSc3391 RSp1383 RSp1509
  Atu:  AGc1281 AGc1930 AGc256 AGc3458 AGc4336 AGl1197 AGl129GM
        AGl1399 AGl1881gl AGl1886 AGl2760 AGl2788 AGl3061 AGl928
        AGpT119 AGpT163
  Sme:  SMa0585 SMa2087 SMa2093 SMb20570 SMb21114 SMc01827 SMc02344
  Bme:  BMEI1737 BMEII0109 BMEII0797 BMEII0963
  Mlo:  mll1256 mll1296 mll1621 mll1755 mll4559 mll6979 mll8573
        mll9181 mlr2856 mlr2858 mlr6799 mlr7112 mlr7949
  Ccr:  CC0609 CC1833 CC2633
  Ctr:  CT854_2
  Cpn:  CPn1012_2
_______

[C] COG0716 Flavodoxins
  Afu:  AF2332
  Mac:  MA0361 MA0363 MA0407 MA2699
  Mth:  MTH1799 MTH847
  Mja:  MJ0298
  Mka:  MK0288
  Sce:  YJR137c_3
  Spo:  SPAC10F6.01c_3
  Fnu:  FN0029 FN0119 FN0472 FN0513 FN0724 FN0772 FN1037
        FN1822
  Cac:  CAC0203 CAC0587 CAC2452 CAC3417 CAC3664
  Lla:  L197697
  Spy:  SPy0721
  Spn:  SP1297
  Lin:  lin1822 lin2257
  Bsu:  BS_ykuN BS_ykuP
  Syn:  sll0248
  Nos:  alr2405
  Eco:  fldA fldB mioC yqcA
  EcZ:  Z4106 ZfldA ZfldB ZmioC
  Ecs:  ECs0715 ECs3650 ECs3767 ECs4684
  Ype:  YPO0001 YPO0893 YPO1039 YPO2003 YPO2635
  Sty:  STM0694 STM2963 STM3045 STM3875
  Buc:  BU299
  Vch:  VC0002 VC2099 VC2420
  Pae:  PA3435
  Hin:  HI0191 HI0669
  Pmu:  PM0353 PM1484
  Xfa:  XF1198
  Rso:  RSc0187 RSc1509 RSc1510
  Hpy:  HP1161
  jHp:  jhp1088
  Cje:  Cj1382c
  Tpa:  TP0925
_______

[F] COG0717 Deoxycytidine deaminase
  Afu:  AF1108
  Hbs:  VNG0245G VNG2570G
  Mac:  MA0440
  Mth:  MTH1605 MTH1847
  Mja:  MJ0430 MJ1102
  Mka:  MK0291 MK1566
  Tac:  Ta0598m
  Tvo:  TVN0636
  Pho:  PH1997
  Pab:  PAB1164
  Pya:  PAE2008
  Sso:  SSO0190 SSO2954
  Ape:  APE0069 APE0333
  Aae:  aq_1607
  Cac:  CAC0025
  Cgl:  Cgl2789
  Mtu:  Rv0321
  MtC:  MT0336
  Mle:  ML2507
  Bha:  BH0368
  Syn:  sll1258
  Nos:  all0066
  Eco:  dcd
  EcZ:  Zdcd
  Ecs:  ECs2872
  Ype:  YPO1525
  Sty:  STM2121
  Buc:  BU108
  Pae:  PA3480
  Hin:  HI0133
  Pmu:  PM0951
  Xfa:  XF0762
  Nme:  NMB0849
  NmA:  NMA1060
  Rso:  RSc2366
  Hpy:  HP0372
  jHp:  jhp1009
  Cje:  Cj1292
  Atu:  AGc764
  Sme:  SMc02218
  Bme:  BMEI1616
  Mlo:  mlr5652
  Ccr:  CC2237
  Rpr:  RP069
  Rco:  RC0099
  Ctr:  CT039
  Cpn:  CPn0392
_______

[S] COG0718 Uncharacterized protein conserved in bacteria
  Tma:  TM0687
  Fnu:  FN1270
  Dra:  DR0199
  Cac:  CAC0126
  Cgl:  Cgl0244
  Mtu:  Rv3716c
  MtC:  MT3819
  Mle:  ML2330
  Lla:  L122849
  Spy:  SPy1862
  Spn:  SP1102
  Sau:  SA0437
  Lin:  lin2851
  Bsu:  BS_yaaK
  Bha:  BH0035
  Syn:  slr1847
  Nos:  alr5067
  Eco:  ybaB
  EcZ:  ZybaB
  Ecs:  ECs0524
  Ype:  YPO3121
  Sty:  STM0485
  Buc:  BU482
  Vch:  VC1055
  Pae:  PA1533
  Hin:  HI0442
  Pmu:  PM0205
  Xfa:  XF1808
  Nme:  NMB1444
  NmA:  NMA1657
  Rso:  RSc1192
  Hpy:  HP0035
  jHp:  jhp0031
  Cje:  Cj1642
  Atu:  AGc145
  Sme:  SMc02906
  Bme:  BMEI1909
  Mlo:  mlr5504
  Ccr:  CC0268
  Rpr:  RP866
  Rco:  RC1337
  Ctr:  CT335
  Cpn:  CPn0039
  Bbu:  BB0462
  Uur:  UU088
  Mpu:  MYPU_0500
  Mpn:  MPN275
  Mge:  MG134
_______

[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component
  Afu:  AF2365
  Hbs:  VNG0525C VNG0527C
  Mac:  MA0936 MA4407
  Mth:  MTH1150
  Mja:  MJ0034
  Mka:  MK1232
  Tac:  Ta0203 Ta0204
  Tvo:  TVN1389 TVN1390
  Pho:  PH0883 PH1385
  Pab:  PAB1856
  Pya:  PAE0932 PAE1813
  Sso:  SSO0927 SSO0928
  Ape:  APE1703 APE1706
  Tma:  TM1369 TM1370 TM1416
  Dra:  DR2101 DR2106
  Cac:  CAC3289 CAC3290
  Cgl:  Cgl1526 Cgl1527
  Mtu:  Rv1461_1 Rv1461_3 Rv1462
  MtC:  MT1508_1 MT1508_3 MT1509
  Mle:  ML0593_1 ML0593_3 ML0594
  Lla:  L29491 L33412
  Spy:  SPy0287 SPy0290
  Spn:  SP0868 SP0871
  Sau:  SA0775 SA0778
  Lin:  lin2506 lin2509
  Bsu:  BS_yurU BS_yurX
  Bha:  BH3467 BH3470
  Syn:  slr0074 slr0076
  Nos:  alr2492 alr2494
  Eco:  ynhC ynhE
  EcZ:  ZynhC ZynhE
  Ecs:  ECs2388 ECs2390
  Ype:  YPO2401 YPO2403
  Sty:  STM1370 STM1372
  Xfa:  XF1474 XF1476
  Atu:  AGc3345 AGc3348
  Sme:  SMc00530 SMc00532
  Bme:  BMEI1040 BMEI1042
  Mlo:  mlr0016 mlr0020
  Ccr:  CC1861 CC1864
  Ctr:  CT684 CT686
  Cpn:  CPn0690 CPn0692
  Tpa:  TP0612 TP0613
_______

[H] COG0720 6-pyruvoyl-tetrahydropterin synthase
  Afu:  AF0440
  Hbs:  VNG1024C VNG6306C
  Mac:  MA0956 MA4196
  Mth:  MTH1228
  Mja:  MJ1272
  Mka:  MK0819
  Tac:  Ta0950
  Tvo:  TVN1095
  Pho:  PH0634 PH1939
  Pab:  PAB1123 PAB1445
  Pya:  PAE2137
  Sso:  SSO2412
  Aae:  aq_269 aq_853
  Tma:  TM0038
  Cac:  CAC2526 CAC2576 CAC2581_1 CAC2585 CAC2592_1 CAC3624
  Sau:  SA0666
  Bsu:  BS_ykvK
  Bha:  BH2243
  Syn:  slr0078
  Nos:  alr0080 alr4554
  Eco:  ygcM
  EcZ:  ZygcM
  Ecs:  ECs3620
  Ype:  YPO3373
  Sty:  STM2949
  Vch:  VC1299
  Pae:  PA2666
  Hin:  HI1190
  Pmu:  PM0185
  Xfa:  XF0193
  Nme:  NMB0527
  NmA:  NMA0704
  Rso:  RSc1450
  Hpy:  HP0933
  jHp:  jhp0867
  Cje:  Cj0159c
  Atu:  AGl2952
  Sme:  SMb20939
  Bme:  BMEI0094
  Mlo:  mll5797 mll8751
  Ccr:  CC3158
  Rpr:  RP178
  Rco:  RC0225
_______

[J] COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
  Afu:  AF2328
  Hbs:  VNG0870G
  Mac:  MA4522
  Mth:  MTH415
  Mja:  MJ0243
  Mka:  MK0359
  Sso:  SSO6855
  Ape:  APE1716
  Aae:  aqq_07
  Tma:  TM0252
  Fnu:  FN0755
  Dra:  DR1275
  Cac:  CAC2671 CAC2978
  Cgl:  Cgl1217
  Mtu:  Rv3012c
  MtC:  MT3092
  Mle:  ML1703
  Lla:  L0475
  Spy:  SPy1772
  Spn:  SP0438
  Sau:  SA1717
  Lin:  lin1868
  Bsu:  BS_yerL
  Bha:  BH0665
  Syn:  slr0033
  Nos:  asl3192
  Pae:  PA4482
  Nme:  NMB1355
  NmA:  NMA1567
  Rso:  RSc0058
  Hpy:  HP0975
  jHp:  jhp0909
  Cje:  Cj0398
  Atu:  AGc2429
  Sme:  SMc01353
  Bme:  BMEII0674
  Mlo:  msl0677
  Ccr:  CC2438
  Rpr:  RP153
  Rco:  RC0195
  Ctr:  CT002
  Cpn:  CPn0002
  Tpa:  TP1019
  Bbu:  BB0343
  Mpn:  MPN236_2
  Mge:  MG098_2
_______

[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
  Sce:  YBR249c YDR035w
  Spo:  SPAC24H6.10c SPAP8A3.07c
  Dra:  DR1817
  Cgl:  Cgl965
  Lla:  L0063 L0064
  Spn:  SP1700 SP1701
  Nos:  all0574
  Eco:  aroF aroG aroH
  EcZ:  ZaroF ZaroG ZaroH
  Ecs:  ECs0782 ECs2411 ECs3464
  Ype:  YPO2411 YPO3286
  Sty:  STM0760 STM1347 STM2670
  Buc:  BU124
  Vch:  VC0695 VC1507
  Pae:  PA1750 PA2943
  Hin:  HI1547
  Pmu:  PM0563 PM0665
  Xfa:  XF0026
  Nme:  NMB0307
  NmA:  NMA2180
  Rso:  RSc0743 RSc2660
  Mlo:  mll4988
  Ccr:  CC1397
_______

[C] COG0723 Rieske Fe-S protein
  Hbs:  VNG0584H
  Mac:  MA0465_2
  Tac:  Ta1223 Ta1229m
  Tvo:  TVN0366 TVN0372
  Pya:  PAE1349
  Sso:  SSO2660 SSO2803 SSO2971
  Ape:  APE1724 APE2563
  Sce:  YEL024w
  Spo:  SPBC16H5.06
  Aae:  aq_045 aq_234
  Dra:  DR0342 DR0435
  Cac:  CAC2596_2
  Cgl:  Cgl2142_2
  Mtu:  Rv2195_2
  MtC:  MT2251_2
  Mle:  ML0880_2
  Bsu:  BS_qcrA BS_yhfW_2
  Bha:  BH1672 BH3871_2
  Syn:  sll0254_2 sll1182 sll1316 slr1185
  Nos:  all0606 all1512 all2453 all4511 alr2785_2
  Vch:  VC0573
  Pae:  PA4431
  Xfa:  XF0908
  Nme:  NMB2053
  NmA:  NMA0383
  Rso:  RSc2929
  Hpy:  HP1540
  jHp:  jhp1459
  Cje:  Cj1186c
  Atu:  AGc4074
  Sme:  SMa1592_2 SMc00187 SMc02428_2
  Bme:  BMEI0473
  Mlo:  mll2707 mlr0970
  Ccr:  CC0472
  Rpr:  RP270
  Rco:  RC0358
_______

[R] COG0724 RNA-binding proteins (RRM domain)
  Sce:  YBL051c YBR119w YBR212w YCL011c YDL213c YDR381w YDR429c
        YDR432w YER165w YFR023w YFR032c YGL044c YGR156w YGR159c
        YGR250c YHL024w YHL034c YHR015w YHR086w YIL061c YIR001c
        YIR005w YIR009w YKL214c YLL046c YML117w YMR198w YMR268c
        YNL004w YNL016w YNL110c YNL175c YNL286w YOL041c YOL123w
        YOR319w YOR361c_1 YPL043w YPL178w YPL184c YPL190c_2 YPL253c
        YPR112c
  Spo:  SPAC12G12.03 SPAC140.02 SPAC16.02c SPAC1610.03c SPAC16E8.06c SPAC17A2.09c SPAC19A8.13
        SPAC19G12.07c SPAC22E12.02 SPAC23A1.09 SPAC25G10.01 SPAC25G10.08_1 SPAC2F7.11 SPAC31G5.01
        SPAC328.05 SPAC343.07 SPAC3G6.04 SPAC3H8.09c_2 SPAC57A7.04c SPAC644.16 SPBC106.12c
        SPBC1289.02c SPBC1289.12 SPBC13A2.01c SPBC13G1.14c SPBC146.07 SPBC16A3.18 SPBC16E9.12c
        SPBC17G9.05_2 SPBC1861.04c SPBC18H10.03 SPBC18H10.04c SPBC1D7.04c SPBC23E6.01c SPBC29A10.02
        SPBC29A3.07c SPBC365.04c SPBC3B9.11c SPBC428.12c SPBC4B4.07c SPBC4F6.14 SPBC660.11
        SPBC660.15 SPBC887.05c SPBC8D2.09c SPBP22H7.02c SPBPI056_1 SPCC1827.05c SPCC74.09
  Ecu:  ECU01g0540 ECU01g0840 ECU02g0250 ECU02g0530 ECU03g0730 ECU03g0760 ECU04g1300
        ECU05g1440 ECU06g0230i ECU07g0340 ECU07g1720 ECU08g0380 ECU08g0520 ECU10g1110
  Syn:  sll0517 slr0193 ssr1480
  Nos:  all2777 all2928 all4377 alr0741 alr2087 alr2311 alr4683
        asl4022
  Vch:  VC0159
  Hpy:  HP0827
  jHp:  jhp0766
  Tpa:  TP0356
_______

[P] COG0725 ABC-type molybdate transport system, periplasmic component
  Afu:  AF0094
  Hbs:  VNG1595C
  Mac:  MA0280 MA0325 MA1237 MA2280
  Mth:  MTH924
  Mja:  MJ1186
  Mka:  MK1521
  Tac:  Ta1052
  Tvo:  TVN0544
  Pho:  PH0151
  Pab:  PAB0101
  Pya:  PAE3569
  Sso:  SSO1031
  Ape:  APE0272
  Aae:  aq_1609
  Dra:  DRA0169
  Cac:  CAC0281
  Cgl:  Cgl0215
  Mtu:  Rv1857
  MtC:  MT1905
  Sau:  SA2074
  Lin:  lin1033
  Bsu:  BS_yvgL
  Bha:  BH3329
  Syn:  sll0738
  Nos:  alr5178
  Eco:  modA
  EcZ:  ZmodA
  Ecs:  ECs0791
  Ype:  YPO0080 YPO1145
  Sty:  STM0781 STM3141
  Vch:  VCA0726
  Pae:  PA1863
  Hin:  HI1469 HI1525 HI1693
  Pmu:  PM0744 PM1108 PM1146
  Rso:  RSp0106
  Hpy:  HP0473
  jHp:  jhp0425
  Cje:  Cj0303c
  Atu:  AGc4642
  Sme:  SMc03196
  Bme:  BMEII0005
  Mlo:  mll1465
  Ccr:  CC0328
_______

[G] COG0726 Predicted xylanase/chitin deacetylase
  Mac:  MA0151 MA0797 MA0990 MA1067 MA4181 MA4440 MA4454
  Mka:  MK1320
  Tvo:  TVN0536
  Pab:  PAB0828
  Sce:  YLR307w YLR308w
  Spo:  SPAC19G12.03
  Ecu:  ECU11g0510
  Tma:  TM0113
  Fnu:  FN0393_2 FN0541 FN1242 FN1244
  Dra:  DR1077_1 DR1222 DR1604_2
  Cac:  CAC0090 CAC0358 CAC0436 CAC0960 CAC1037 CAC1359 CAC2316
        CAC2383 CAC2396 CAC3009 CAC3017 CAC3377 CAP0054
  Mtu:  Rv1096
  MtC:  MT1128
  Mle:  ML1950 ML2649
  Lla:  L106031 L81453_2 L82521
  Spy:  SPy1094 SPy1370_2
  Spn:  SP1479
  Sau:  SA2461
  Lin:  lin0436
  Bsu:  BS_ybaN BS_yfjS BS_yheN BS_yjeA_2 BS_ylxY BS_yxkH
  Bha:  BH0243 BH0857 BH0895 BH1302 BH1917 BH2406 BH3902
  Syn:  sll1306
  Nos:  all4345 alr1669 alr1793 alr4278
  Eco:  yadE ycdR yfbH
  EcZ:  Z3514 ZyadE ZycdR
  Ecs:  ECs0134 ECs1269 ECs3144
  Ype:  YPO1573 YPO1952 YPO2419 YPO3404
  Sty:  STM0179 STM0303 STM2300 STM3132
  Vch:  VC0239_2 VC1280_1
  Pae:  PA1517 PA3555
  Xfa:  XF0878 XF1469 XF2395 XF2779_2
  Rso:  RSc0428 RSc1253 RSc1318 RSc2120 RSp0287
  Hpy:  HP0310
  jHp:  jhp0295
  Atu:  AGc1642 AGc4231 AGc4393 AGc856 AGl1972_2
  Sme:  SMa0868 SMb20875 SMb21100 SMb21284_1 SMb21504 SMc00001
  Bme:  BMEI1435 BMEI1577_1 BMEI1603
  Mlo:  mll3280_3 mll5132_1 mll8295 mlr6175 mlr7533 mlr8448
  Ccr:  CC2153 CC2428 CC2605
  Ctr:  CT481
  Cpn:  CPn0688
_______

[R] COG0727 Predicted Fe-S-cluster oxidoreductase
  Afu:  AF0445 AF0486 AF1438 AF1895 AF2306
  Hbs:  VNG0289H
  Mac:  MA0988 MA1394 MA2554 MA4091
  Mja:  MJ0661 MJ0939
  Pho:  PH1693 PH1864
  Pab:  PAB0321 PAB2060
  Pya:  PAE0858 PAE2987
  Sso:  SSO2711
  Dra:  DR2460
  Lla:  L29314
  Syn:  slr0022
  Nos:  alr5129
  Eco:  ykgJ
  EcZ:  ZykgJ
  Ecs:  ECs0318
  Ype:  YPO1286
  Sty:  STM1733
  Vch:  VC1057
  Pae:  PA3209 PA3663 PA4817
  Xfa:  XF1964 XF2027
  Rso:  RSc0699
  Hpy:  HP0274 HP0764_2
  jHp:  jhp0259 jhp0701
  Cje:  Cj0496
  Sme:  SMc02180
  Mlo:  mlr8190
_______

[R] COG0728 Uncharacterized membrane protein, putative virulence factor
  Aae:  aq_1789 aq_509
  Tma:  TM0086
  Fnu:  FN0709
  Dra:  DR0498
  Cac:  CAC3047
  Cgl:  Cgl3028_1
  Mtu:  Rv3910_1
  MtC:  MT4029_1
  Mle:  ML2700_1
  Syn:  slr0488
  Nos:  all0185
  Eco:  mviN
  EcZ:  ZmviN
  Ecs:  ECs1447
  Ype:  YPO2043
  Sty:  STM1170
  Buc:  BU333
  Vch:  VC0680
  Pae:  PA2241 PA4562
  Hin:  HI0964
  Pmu:  PM1660
  Xfa:  XF2420
  Nme:  NMB0277
  NmA:  NMA2210
  Rso:  RSc2557
  Hpy:  HP0885
  jHp:  jhp0817
  Cje:  Cj0801
  Atu:  AGc608
  Sme:  SMc01123
  Bme:  BMEI1805
  Mlo:  mll5320
  Ccr:  CC0065
  Rpr:  RP590
  Rco:  RC0898
  Ctr:  CT624
  Cpn:  CPn0730
  Tpa:  TP0516
  Bbu:  BB0810
_______

[M] COG0729 Outer membrane protein
  Aae:  aq_050
  Fnu:  FN1704_2
  Eco:  ytfM
  EcZ:  ZytfM
  Ecs:  ECs5198
  Ype:  YPO3524
  Sty:  STM4409
  Vch:  VC0603_2 VC2548
  Pae:  PA2543 PA3339_2
  Hin:  HI0698
  Pmu:  PM1809
  Xfa:  XF1231
  Nme:  NMB2134
  NmA:  NMA0296
  Rso:  RSc2384
  Atu:  AGc4742
  Sme:  SMc03097
  Bme:  BMEI1895
  Mlo:  mll1662
  Ccr:  CC1603
_______

[R] COG0730 Predicted permeases
  Afu:  AF0124 AF0127 AF0350 AF1015 AF1508 AF1525 AF1561
        AF1632 AF1688 AF2018 AF2125
  Hbs:  VNG6071C VNG6455C VNG7052 VNG7157
  Mac:  MA1331 MA1675
  Mth:  MTH882
  Mja:  MJ0441
  Mka:  MK0141 MK0143
  Tac:  Ta0416m Ta0586 Ta0985 Ta1108
  Tvo:  TVN0644 TVN0677 TVN0967 TVN1155
  Pho:  PH0518 PH0886 PH1345
  Pab:  PAB0782 PAB1010
  Pya:  PAE2388 PAE2552 PAE2578
  Sso:  SSO0015 SSO2272 SSO2914
  Ape:  APE0183 APE1196
  Aae:  aq_127 aq_1462
  Tma:  TM0376
  Fnu:  FN1706
  Dra:  DR0544 DR1858
  Cac:  CAC0246
  Cgl:  Cgl0053 Cgl0132 Cgl0140 Cgl1280 Cgl2018 Cgl2751
  Mle:  ML0468
  Lla:  L83481
  Sau:  SA0046 SA0080 SA0783 SA1536
  Lin:  lin0630 lin2503
  Bsu:  BS_ydhB BS_yjnA BS_yrkJ BS_ytnM BS_yunE
  Bha:  BH1459 BH2122 BH2939 BH3454
  Syn:  sll1052 slr1262
  Nos:  all0703 all2098 alr3906 alr7620
  Eco:  yfcA
  EcZ:  Z5415 ZyfcA
  Ecs:  ECs3211 ECs4801
  Ype:  YPO2753
  Sty:  STM2382
  Vch:  VC0673 VC1856 VC2384 VCA1052
  Pae:  PA0278 PA0340 PA0790 PA1824 PA2847 PA3457 PA3775
        PA5024
  Hin:  HI0198 HI0806 HI0902
  Pmu:  PM0081 PM0361 PM0596
  Xfa:  XF0764
  Nme:  NMB0432 NMB0451 NMB1319
  NmA:  NMA1533 NMA2035 NMA2053
  Rso:  RSc1541 RSc2426 RSc2517 RSc3337 RSp0190 RSp1264 RSp1268
  Hpy:  HP0226 HP0677
  jHp:  jhp0211 jhp0619
  Cje:  Cj0343c Cj1468
  Atu:  AGc1383 AGc2926 AGc3499 AGc4214 AGc4899 AGc881 AGl1426GM
  Sme:  SMa1050 SMa1368 SMa2359 SMb20104 SMb20287 SMc02232 SMc03862
        SMc03997 SMc04286
  Bme:  BMEI0154 BMEI0698 BMEII0117 BMEII0465 BMEII0611
  Mlo:  mll2193 mll3907 mll5620 mlr1193 mlr2161 mlr4286
  Ccr:  CC0372 CC2862 CC3486
_______

[C] COG0731 Fe-S oxidoreductases
  Afu:  AF0542m AF2261
  Hbs:  VNG2128C
  Mac:  MA0040 MA0160
  Mth:  MTH1039
  Mja:  MJ0257 MJ1312
  Mka:  MK0055 MK1058_2
  Tac:  Ta1275 Ta1466
  Tvo:  TVN0506
  Pho:  PH0981 PH1705
  Pab:  PAB0577 PAB2039
  Pya:  PAE0164
  Sso:  SSO0956
  Ape:  APE1059
  Sce:  YPL207w_2
  Spo:  SPCC1020.08_2
  Tma:  TM1288
  Fnu:  FN0127
  Cac:  CAC1621
  Syn:  slr1464
  Nos:  alr0730
  Hpy:  HP0117
  jHp:  jhp0109
  Cje:  Cj1244
_______

[V] COG0732 Restriction endonuclease S subunits
  Afu:  AF1710
  Hbs:  VNG0107G
  Mac:  MA2103 MA2105 MA2120 MA2415 MA3578
  Mth:  MTH941
  Mja:  MJ0130m MJ1218 MJ1531 MJECL41
  Tvo:  TVN0464 TVN0465
  Pab:  PAB2150
  Mtu:  Rv2755c Rv2761c
  MtC:  MT2825 MT2831
  Lla:  L0310
  Spy:  SPy1254 SPy1905
  Spn:  SP0505 SP0507 SP0508 SP0887 SP0891
  Sau:  SA0392 SA1625
  Lin:  lin0523 lin0525
  Nos:  all2687 alr3476 alr3477 alr3623 alr3625 alr4602
  Eco:  hsdS
  EcZ:  Z5946
  Ecs:  ECs5306
  Sty:  STM4524
  Vch:  VC1768
  Pae:  PA2734
  Hin:  HI0216 HI1286
  Pmu:  PM1538
  Xfa:  XF0296 XF2722 XF2726 XF2741
  Hpy:  HP0462 HP0790 HP0848 HP1383 HP1404
  jHp:  jhp0414 jhp0726 jhp0785 jhp1422
  Cje:  Cj1051c_2 Cj1551c
  Sme:  SMc02295
  Bme:  BMEII0450 BMEII0452
  Ccr:  CC0621
  Rco:  RC1348
  Uur:  UU096 UU097 UU099 UU446 UU447
  Mpu:  MYPU_0830 MYPU_0840 MYPU_4310 MYPU_4340 MYPU_6760 MYPU_6790
  Mpn:  MPN089 MPN201 MPN285 MPN289 MPN290 MPN343 MPN365
        MPN507 MPN615 MPN638
  Mge:  MG438
_______

[R] COG0733 Na+-dependent transporters of the SNF family
  Afu:  AF1995
  Hbs:  VNG1526G VNG1528G VNG6261G
  Mac:  MA0901 MA1518
  Mja:  MJ1319
  Pho:  PH1372
  Pab:  PAB1850
  Aae:  aq_2077
  Fnu:  FN1944 FN1989
  Cgl:  Cgl1001
  Spn:  SP0737 SP0738
  Sau:  SA0417
  Lin:  lin1873
  Bsu:  BS_yhdH BS_yocR
  Bha:  BH0217 BH1128 BH3439
  Vch:  VC1669 VC2012 VC2283
  Hin:  HI0736 HI1690
  Pmu:  PM0380 PM0718
  Nme:  NMB1707 NMB1975
  NmA:  NMA0470 NMA1961
  Hpy:  HP0497 HP0498
  jHp:  jhp0449 jhp0450
  Cje:  Cj0601c Cj0934c Cj0935c
  Ctr:  CT231
  Cpn:  CPn0290
  Tpa:  TP0023
_______

[P] COG0735 Fe2+/Zn2+ uptake regulation proteins
  Afu:  AF2232
  Mac:  MA0971 MA1005
  Tac:  Ta1362m
  Tvo:  TVN0292
  Pya:  PAE2309
  Sso:  SSO2244
  Ape:  APE2021
  Aae:  aq_1207 aq_1418
  Tma:  TM0122 TM1515 TM1776
  Fnu:  FN2045
  Dra:  DR0865
  Cac:  CAC0951 CAC1682 CAC2634
  Cgl:  Cgl2228
  Mtu:  Rv1909c Rv2359
  MtC:  MT1960 MT2428
  Mle:  ML0824
  Lla:  L105533
  Spy:  SPy0187
  Sau:  SA1329 SA1383 SA1678
  Lin:  lin1483 lin1791 lin2070
  Bsu:  BS_fur BS_perR BS_zur
  Bha:  BH0951 BH1396 BH1527
  Syn:  sll0567 sll1937 slr1738
  Nos:  all1691 all2473 alr0957
  Eco:  fur zur
  EcZ:  Zfur ZyjbK
  Ecs:  ECs0714 ECs5029
  Ype:  YPO0315 YPO2634
  Sty:  STM0693 STM4241
  Vch:  VC0378 VC2106
  Pae:  PA2384 PA4764 PA5499
  Hin:  HI0190
  Pmu:  PM0352
  Xfa:  XF0821 XF2344
  Nme:  NMB0205 NMB1266
  NmA:  NMA0064 NMA1471
  Rso:  RSc0048 RSc2747 RSp0247
  Hpy:  HP1027
  jHp:  jhp0397
  Cje:  Cj0322 Cj0400
  Atu:  AGc249 AGc2801 AGc620
  Sme:  SMc00329 SMc02510 SMc04242
  Bme:  BMEI0375 BMEI1563 BMEI1955 BMEII0175
  Mlo:  mll3299 mlr5570
  Ccr:  CC0057 CC0357
  Bbu:  BB0647
  Mpn:  MPN329
  Mge:  MG236
_______

[I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)
  Sce:  YPL148c YPL231w_4
  Spo:  SPAC4A8.11c_4
  Aae:  aq_813
  Tma:  TM0692
  Fnu:  FN1342
  Dra:  DR0247
  Cac:  CAC0489
  Cgl:  Cgl2440
  Mtu:  Rv2523c
  MtC:  MT2599
  Mle:  ML1192
  Lla:  L61355
  Spy:  SPy1804
  Spn:  SP1699
  Sau:  SA1875
  Lin:  lin0884
  Bsu:  BS_ydcB
  Bha:  BH0518
  Eco:  acpS
  EcZ:  Z1544 ZacpS
  Ecs:  ECs1284 ECs3429
  Ype:  YPO2929
  Sty:  STM2577
  Buc:  BU256
  Vch:  VC2457
  Nme:  NMB0452
  NmA:  NMA2033
  Rso:  RSc1067
  Hpy:  HP0808
  jHp:  jhp0744
  Cje:  Cj1409
  Atu:  AGc1902
  Sme:  SMc02654
  Bme:  BMEI1289
  Mlo:  mlr7761
  Ccr:  CC1558
  Rpr:  RP577
  Rco:  RC0881
  Ctr:  CT100
  Cpn:  CPn0313
  Tpa:  TP0828
  Bbu:  BB0010
  Uur:  UU393
  Mpu:  MYPU_1130
  Mpn:  MPN298
  Mge:  MG211.1
_______

[F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
  Afu:  AF0876
  Hbs:  VNG1408G VNG1450G
  Mth:  MTH1492
  Sce:  YHR202w
  Spo:  SPAC1039.02 SPAC17G6.03 SPBPB2B2.06c
  Aae:  aq_1803
  Tma:  TM1878
  Dra:  DR0505 DR1736 DRA0018
  Cac:  CAC0353 CAC1963
  Cgl:  Cgl0022 Cgl0023 Cgl0328
  Lla:  L100541 L181858 L99798
  Spy:  SPy0872
  Sau:  SA0022 SA0140 SA0784 SA0881
  Lin:  lin0177 lin2502
  Bsu:  BS_yfkN_1 BS_yfkN_2 BS_yhcR_3 BS_yunD
  Bha:  BH0026_2 BH1015_1 BH3453
  Syn:  sll0654_2 slr0306
  Eco:  cpdB ushA
  EcZ:  ZcpdB ZushA
  Ecs:  ECs0533 ECs5191
  Ype:  YPO3530
  Sty:  STM0033 STM0494 STM4104 STM4403
  Vch:  VC2174 VC2416 VC2562 VCA0545
  Hin:  HI0206 HI0583
  Pmu:  PM1193 PM2014
  Rso:  RSc3253 RSc3363
  Hpy:  HP0104
  jHp:  jhp0096
  Atu:  AGc1055 AGc2233 AGl2132
  Sme:  SMc04018 SMc04449
  Mlo:  mlr0366 mlr3017_1
  Tpa:  TP0104
  Mpu:  MYPU_0550
_______

[G] COG0738 Fucose permease
  Sce:  YOL137w
  Bsu:  BS_yhjI
  Eco:  fucP
  EcZ:  ZfucP
  Ecs:  ECs3661
  Sty:  STM3792
  Hin:  HI0610
  Xfa:  XF1462 XF1609
  Nme:  NMB0535
  NmA:  NMA0714
  Hpy:  HP1174
  jHp:  jhp1101
  Cje:  Cj0486
  Bme:  BMEII1053
  Ccr:  CC1103 CC1133
_______

[M] COG0739 Membrane proteins related to metalloendopeptidases
  Aae:  aq_1743 aq_1753 aq_2113 aq_652_2
  Tma:  TM0409 TM1660
  Fnu:  FN0477
  Dra:  DR0598 DR0848 DR1549 DR2291
  Cac:  CAC1252
  Cgl:  Cgl0835 Cgl1980 Cgl2447
  Mtu:  Rv0950c Rv2891 Rv3786c
  MtC:  MT0977 MT3894
  Mle:  ML0154
  Lla:  L63739_2
  Sau:  SA0205 SA0265_2 SA1766_3 SA2004
  Lin:  lin1716_2 lin2647_2
  Bsu:  BS_spoIIQ BS_spoIVFA BS_yomI_4 BS_yunA
  Bha:  BH1600 BH2643 BH3016 BH3436 BH3600_2 BH3746
  Syn:  sll1488 slr0878 slr0993 slr1708
  Nos:  all1862 all5163 all7672 alr3276 alr3353 alr4007 alr5257
        asl2362
  Eco:  nlpD yebA ygeR
  EcZ:  Z4203 ZnlpD ZyebA
  Ecs:  ECs2566 ECs3596 ECs3738
  Ype:  YPO2062 YPO3356
  Sty:  STM1890 STM2925 STM3038
  Buc:  BU418
  Vch:  VC0503 VC0533 VC0630 VC0843 VCA0079 VCA1043
  Pae:  PA0667 PA1871 PA3623 PA3787 PA4404 PA4924 PA5363
        PA5551
  Hin:  HI0409 HI0706
  Pmu:  PM0243 PM1614
  Xfa:  XF0167 XF0805 XF0855 XF0862 XF0987
  Nme:  NMB0315 NMB1483
  NmA:  NMA1692 NMA2172
  Rso:  RSc1206 RSc2835
  Hpy:  HP0506 HP0750 HP1054 HP1543 HP1544
  jHp:  jhp0371 jhp0456 jhp0687 jhp1455 jhp1456
  Cje:  Cj0131 Cj1087c Cj1215 Cj1235 Cj1275c
  Atu:  AGc3124 AGc3364 AGl1345
  Sme:  SMb20973_2 SMc00539 SMc00677_2 SMc02060 SMc02432
  Bme:  BMEI0197 BMEI1079 BMEI1268 BMEII0347_2
  Mlo:  mll1077 mll8577 mlr2365 mlr3423
  Ccr:  CC1872 CC1996 CC2248 CC2297 CC3034 CC3301
  Rpr:  RP300 RP407
  Rco:  RC0403 RC0557 RC1093
  Tpa:  TP0049 TP0155 TP0444 TP0702 TP0706 TP0782 TP0864
  Bbu:  BB0246 BB0255 BB0262 BB0761
_______

[OU] COG0740 Protease subunit of ATP-dependent Clp proteases
  Aae:  aq_1339
  Tma:  TM0695
  Fnu:  FN2016
  Dra:  DR1972
  Cac:  CAC1811 CAC1893 CAC2640
  Cgl:  Cgl2359 Cgl2360
  Mtu:  Rv2460c Rv2461c
  MtC:  MT2535 MT2536
  Mle:  ML1479 ML1480
  Lla:  L34899 L72391
  Spy:  SPy0395
  Spn:  SP0746
  Sau:  SA0723 SA1775
  Lin:  lin1103 lin2612
  Bsu:  BS_clpP BS_ymfB
  Bha:  BH2397 BH3118 BH3564
  Syn:  sll0534 slr0164 slr0165 slr0542
  Nos:  all4357 all4358 alr1238 alr3683
  Eco:  clpP
  EcZ:  Z0967_1 Z2112_1 Z3097_1 ZclpP
  Ecs:  ECs0491 ECs0829_1 ECs2960_1
  Ype:  YPO3157
  Sty:  STM0448 STM0912_1 STM1033_1
  Buc:  BU475
  Vch:  VC1922
  Pae:  PA1801 PA2189 PA3326
  Hin:  HI0714
  Pmu:  PM1976
  Xfa:  XF0511_1 XF1187
  Nme:  NMB1312
  NmA:  NMA1525
  Rso:  RSc1711
  Hpy:  HP0794
  jHp:  jhp0730
  Cje:  Cj0192c
  Atu:  AGc2324 AGc3003 AGc4125
  Sme:  SMc01903 SMc02720 SMc03841
  Bme:  BMEI0874
  Mlo:  mlr0748 mlr8472 mlr8523
  Ccr:  CC1963
  Rpr:  RP520
  Rco:  RC0746
  Ctr:  CT431 CT706
  Cpn:  CPn0520 CPn0847
  Tpa:  TP0507 TP1041
  Bbu:  BB0611 BB0757
_______

[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
  Aae:  aq_1420 aq_1579 aq_1796
  Tma:  TM0685 TM0921
  Cac:  CAC1100 CAC2677
  Lla:  L192354
  Spy:  SPy1147
  Spn:  SP1026
  Lin:  lin0725
  Bsu:  BS_yddH_1 BS_yjbJ BS_yocA BS_yomI_3
  Bha:  BH1391 BH2852
  Syn:  slr0534
  Nos:  alr1112
  Eco:  dniR mltC mltE pbl slt
  EcZ:  Z4175 Z5131 ZdniR ZmltC ZmltE Zslt
  Ecs:  ECs0207 ECs1687 ECs3711 ECs3839 ECs4579 ECs5350
  Ype:  YPO0452 YPO0954 YPO1078 YPO2438
  Sty:  PSLT072 STM0260 STM1799 STM2877 STM3112 STM4217 STM4582
  Buc:  BU264
  Vch:  VC0450 VC0700 VC2237
  Pae:  PA1812 PA3020
  Hin:  HI0761 HI0829
  Pmu:  PM0326 PM1321
  Xfa:  XF0907 XF1363 XF2045 XFa0036
  Nme:  NMB1297 NMB1462 NMB1949
  NmA:  NMA0503 NMA1507 NMA1674
  Rso:  RSc0088 RSc0709 RSc0977 RSc1516 RSc2291 RSc2815 RSc2896
        RSp0841
  Hpy:  HP0645 HP1572
  jHp:  jhp0590 jhp1480
  Cje:  Cj0645 Cj0843c
  Atu:  AGc1007 AGc1881 AGc3831 AGc3839 AGl3431
  Sme:  SMc01230 SMc01850 SMc01855 SMc02403 SMc03045
  Bme:  BMEI0500 BMEI0566 BMEI1302 BMEI1878 BMEII0157
  Mlo:  mll1569 mll2525 mll3791 mll7744 mlr2934 mlr6189 mlr9248
        mlr9745
  Ccr:  CC1194 CC1332 CC2416
  Rpr:  RP400 RP457
  Rco:  RC0547 RC0686
  Tpa:  TP0043 TP0623_2
  Bbu:  BB0259
_______

[L] COG0742 N6-adenine-specific methylase
  Tma:  TM1388
  Fnu:  FN1329
  Dra:  DR0643
  Cac:  CAC1737
  Cgl:  Cgl1296
  Mtu:  Rv2966c
  MtC:  MT3044
  Mle:  ML1664
  Lla:  L22498
  Spy:  SPy1538
  Spn:  SP1969
  Sau:  SA0972
  Lin:  lin2159
  Bsu:  BS_ylbH
  Bha:  BH2590
  Syn:  slr0383
  Nos:  all1367
  Eco:  yhhF
  EcZ:  ZyhhF
  Ecs:  ECs4314
  Ype:  YPO3816
  Sty:  STM3572
  Buc:  BU023
  Vch:  VC0146
  Pae:  PA0370
  Hin:  HI0767
  Pmu:  PM1516
  Xfa:  XF0979
  Nme:  NMB0122
  NmA:  NMA0151
  Rso:  RSc0389
  Hpy:  HP0810
  jHp:  jhp0746
  Cje:  Cj1461
  Atu:  AGc1242
  Sme:  SMc00902
  Bme:  BMEII1038
  Mlo:  mlr8254
  Ccr:  CC0227
  Rpr:  RP545
  Rco:  RC0809
  Ctr:  CT487
  Cpn:  CPn0605
  Tpa:  TP0065
  Bbu:  BB0206
  Mpu:  MYPU_6880
_______

[I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase
  Aae:  aq_404
  Tma:  TM0889
  Fnu:  FN1324
  Dra:  DR1508
  Cac:  CAC1795
  Cgl:  Cgl1969
  Mtu:  Rv2870c
  MtC:  MT2938
  Mle:  ML1583
  Lin:  lin1354
  Bsu:  BS_yluB
  Bha:  BH2421
  Syn:  sll0019
  Nos:  alr4351
  Eco:  dxr
  EcZ:  ZyaeM
  Ecs:  ECs0175
  Ype:  YPO1048
  Sty:  STM0220
  Buc:  BU235
  Vch:  VC2254
  Pae:  PA3650
  Hin:  HI0807
  Pmu:  PM1988
  Xfa:  XF1048
  Nme:  NMB0184
  NmA:  NMA0083
  Rso:  RSc1410
  Hpy:  HP0216
  jHp:  jhp0202
  Cje:  Cj1346c
  Atu:  AGc4736
  Sme:  SMc03105
  Ccr:  CC1917
  Ctr:  CT071
  Cpn:  CPn0345
  Tpa:  TP0601
_______

[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)
  Tma:  TM0886
  Fnu:  FN0525
  Dra:  DR0479 DR1417
  Cac:  CAC2301 CAP0076
  Cgl:  Cgl0279 Cgl2930
  Mtu:  Rv0050 Rv3682
  MtC:  MT0056 MT3784
  Mle:  ML2308 ML2688
  Lla:  L129183 L160485 L191431
  Spy:  SPy0097 SPy1649 SPy2059
  Spn:  SP0369 SP2010 SP2099
  Sau:  SA1283 SA1551 SA1691
  Lin:  lin2006 lin2331
  Bsu:  BS_pbpD BS_pbpF BS_ponA BS_ywhE
  Bha:  BH1201 BH1702 BH3229 BH3812
  Syn:  sll0002_2 sll1434 slr1710
  Nos:  all2952 all2981 alr4579 alr5324 alr5326
  Eco:  mrcB mtgA
  EcZ:  ZmrcB ZmtgA
  Ecs:  ECs0153 ECs4087
  Ype:  YPO3393 YPO3552
  Sty:  STM0190 STM2439 STM3326
  Buc:  BU200
  Vch:  VC0602 VC1321
  Pae:  PA0378 PA0788 PA4700
  Hin:  HI0831 HI1725
  Pmu:  PM0324 PM0456
  Xfa:  XF0884 XF1715
  Nme:  NMB0357
  NmA:  NMA2130
  Rso:  RSc1476 RSc2776
  Hpy:  HP0597
  jHp:  jhp0544
  Cje:  Cj0508
  Atu:  AGc158 AGc1696 AGc4930
  Sme:  SMa1905 SMc00122 SMc02856 SMc03883
  Bme:  BMEI0271 BMEI1351 BMEI1831
  Mlo:  mll3238 mll3783 mll7657
  Ccr:  CC0252 CC0325 CC1516 CC3277
_______

[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  Aae:  aq_319
  Tma:  TM0126 TM0399 TM1259 TM1655
  Fnu:  FN0585 FN0943 FN1261
  Dra:  DR0743 DR0781 DR1605 DR2245 DR2327 DR2415 DR2418
        DRB0091
  Cac:  CAC0224 CAC0289 CAC0321 CAC0371 CAC0450 CAC0524 CAC0564
        CAC0653 CAC0830 CAC0860 CAC1506 CAC1516 CAC1552 CAC1700
        CAC2435 CAC2735 CAC2759 CAC3220 CAC3517 CAC3663 CAC3677
  Cgl:  Cgl0273 Cgl0399 Cgl0731 Cgl0850 Cgl2556 Cgl2609 Cgl2904
  Mtu:  Rv0491 Rv0602c Rv0757 Rv0818 Rv0903c Rv0981 Rv1027c
        Rv1033c Rv2884 Rv3246c Rv3765c
  MtC:  MT0510 MT0631 MT0782 MT0840 MT0926 MT1009 MT1056
        MT1062 MT2952 MT3344 MT3872
  Mle:  ML0174 ML0773 ML2123 ML2439
  Lla:  L0123 L0125 L0129 L0131 L0133 L0135
  Spy:  SPy0528 SPy0874 SPy1081 SPy1237 SPy2027
  Spn:  SP0083 SP0376 SP0603 SP0798 SP1227 SP1633 SP2082
        SP2193
  Sau:  SA0017 SA0066 SA0614 SA0661 SA1247 SA1248 SA1323
        SA1516 SA1883 SA2151 SA2418
  Lin:  lin0315 lin1414 lin1542 lin1856 lin2062 lin2516 lin2644
        lin2728 lin2826 pli0051
  Bsu:  BS_phoP BS_resD BS_ybdJ BS_ycbL BS_yclJ BS_ykoG BS_yrkP
        BS_ytsA BS_yvcP BS_yvqA BS_yvrH BS_yxdJ BS_yycF
  Bha:  BH0271 BH0288 BH0372 BH0755 BH0820 BH1153 BH1172
        BH1580 BH1808 BH1944 BH2264 BH2701 BH3024 BH3157
        BH3426 BH3911 BH4027
  Syn:  sll0396 sll0649 sll0789 sll0797 sll1330 slr0081 slr0115
        slr0947 slr1584 slr1837
  Nos:  all0129 all1964 all3788 all3822 all4312 all4503 all4727
        all4750 all5174_1 all5323 all7584 all7606 alr0072 alr0774
        alr1170 alr1194 alr2428_1 alr3260 alr5188
  Eco:  arcA baeR basR cpxR creB kdpE ompR
        phoB phoP rstA torR ybfI yedW ygiX
        ylcA
  EcZ:  Z5684 ZarcA ZbaeR ZbasR ZcpxR ZcreB ZkdpE
        ZompR ZphoB ZphoP ZrstA ZtorR ZyedW ZygiX
        ZylcA
  Ecs:  ECs0449 ECs0609 ECs0722 ECs1150 ECs1602 ECs2314 ECs2707
        ECs2887 ECs3907 ECs4247 ECs4838 ECs5067 ECs5095 ECs5356
        ECs5359
  Ype:  YPO0074 YPO0136 YPO0458 YPO0896 YPO1634 YPO2001 YPO2308
        YPO2688 YPO2853 YPO2998 YPO3009 YPO3205 YPO3507 YPO3958
  Sty:  STM0397 STM0702 STM1096 STM1231 STM1475 STM2131 STM2785
        STM3177 STM3502 STM3824 STM4059 STM4292 STM4588 STM4598
  Vch:  VC0719 VC1320 VC1638 VC1719 VC2368 VC2692 VC2714
        VCA0239 VCA0256 VCA0532 VCA0566 VCA1105
  Pae:  PA0463 PA0756 PA0929 PA1157 PA1179 PA1437 PA1637
        PA1799 PA2479 PA2523 PA2657 PA2686 PA2809 PA3077
        PA3192 PA3204 PA4032 PA4101 PA4381 PA4776 PA4885
        PA4983 PA5200 PA5360
  Hin:  HI0837 HI0884 HI1379 HI1708
  Pmu:  PM0214 PM0219 PM0432 PM1376 PM1887
  Xfa:  XF0322 XF0389 XF1928 XF2336 XF2534 XF2593
  Nme:  NMB0595
  NmA:  NMA0798
  Rso:  RSc0018 RSc0543 RSc0550 RSc1073 RSc1076 RSc1534 RSc1648
        RSc1736 RSc1892 RSc2935 RSc3064 RSc3087 RSc3392 RSc3404
        RSp0314 RSp0489 RSp0523 RSp0655 RSp0852 RSp0917 RSp1023
        RSp1042 RSp1161 RSp1196 RSp1442 RSp1455 RSp1554
  Hpy:  HP0166 HP1043 HP1365
  jHp:  jhp0152 jhp0381 jhp1283 jhp1443
  Cje:  Cj0355c Cj0890c Cj1223c Cj1227c Cj1261 Cj1491c
  Atu:  AGc1009 AGc1118 AGc1778 AGc1793 AGc4009 AGc4390 AGc4416
        AGc4479 AGc4608 AGc5010 AGc54 AGc746 AGl1670 AGl201
        AGl2095 AGl2108 AGl339 AGl490 AGpA174 AGpA177 AGpA747
        AGpAbx228 AGpT15
  Sme:  SMa0961 SMa0969 SMa1138 SMa1139 SMa2325 SMb20219 SMb20610
        SMb20722 SMb21210 SMb21561 SMc00458 SMc00654 SMc01593 SMc02140
        SMc02366 SMc02560 SMc03046 SMc03820
  Bme:  BMEI0066 BMEI0423 BMEI0493 BMEI1329 BMEI1337 BMEI1984 BMEI2036
        BMEII0158 BMEII0791 BMEII1014
  Mlo:  mll2816 mll3126 mll3656 mll3716 mll4419 mll5095 mll5373
        mll5674 mll5778 mll6475_1 mll7953 mll9617 mlr1334 mlr2666
        mlr2740 mlr2935 mlr3657 mlr4237 mlr4457 mlr5913 mlr6334
        mlr6617 mlr7684 mlr7695
  Ccr:  CC0237 CC0294 CC1182 CC1293 CC1304 CC1595 CC2757
        CC2766 CC2931 CC3035 CC3325 CC3743
  Rpr:  RP071 RP427
  Rco:  RC0063 RC0101 RC0593
  Ctr:  CT630
  Cpn:  CPn0750
_______

[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A
  Afu:  AF2005
  Hbs:  VNG0824G
  Mac:  MA1977
  Mth:  MTH143
  Mja:  MJ1663
  Mka:  MK0406
  Tac:  Ta0231
  Tvo:  TVN1270
  Pho:  PH0072 PH0980
  Pab:  PAB0041 PAB1788
  Pya:  PAE3453
  Sso:  SSO0677
  Ape:  APE0179
  Aae:  aq_1419
  Dra:  DR0645
  Cgl:  Cgl1169
  Mtu:  Rv2453c
  MtC:  MT2528
  Sau:  SA2064
  Lin:  lin1030
  Bsu:  BS_mobA
  Bha:  BH3017
  Syn:  slr0902_2
  Nos:  all0961
  Eco:  mobA
  EcZ:  ZmobA
  Ecs:  ECs4780
  Ype:  YPO0013
  Sty:  STM3994
  Vch:  VC1526
  Pae:  PA3030
  Hin:  HI0844
  Pmu:  PM1799
  NmA:  NMA1417
  Rso:  RSc1038
  Hpy:  HP0769
  jHp:  jhp0706
  Cje:  Cj1350
  Atu:  AGc3120
  Sme:  SMc00143
  Bme:  BMEI1020
  Mlo:  mlr0547
  Ccr:  CC3064
_______

[E] COG0747 ABC-type dipeptide transport system, periplasmic component
  Afu:  AF1767
  Hbs:  VNG2349G VNG2358G VNG2527G
  Mac:  MA0302 MA0701 MA0840 MA0883 MA1249 MA1250 MA1914
        MA1915 MA1916 MA2476 MA2477 MA2482 MA2486 MA3048
        MA3455 MA3461 MA3905 MA4247 MA4601
  Tac:  Ta0261 Ta0272 Ta0275 Ta1329
  Tvo:  TVN1332 TVN1424
  Pho:  PH0502 PH0807 PH1409
  Pab:  PAB0091 PAB0627 PAB1343 PAB1871
  Pya:  PAE1300 PAE2391
  Sso:  SSO1288 SSO2619 SSO2669 SSO3043 SSO3053
  Ape:  APE0304_2 APE1390 APE2257
  Aae:  aq_1441
  Tma:  TM0031 TM0056 TM0071 TM0300 TM0309 TM0460 TM0531
        TM1067 TM1150 TM1199 TM1223 TM1226
  Fnu:  FN0192 FN0396 FN0998 FN1111 FN1359 FN1504 FN1523
        FN1652
  Dra:  DR0363 DR0986 DR1290 DR1571 DR1712 DR1955 DRA0210
        DRA0246
  Cac:  CAC0176 CAC2377 CAC3179
  Cgl:  Cgl1075 Cgl1616 Cgl2268 Cgl2385 Cgl2599
  Mtu:  Rv1166 Rv1280c Rv2585c
  MtC:  MT1203 MT1317 MT2662
  Mle:  ML0489 ML1121 ML1497
  Lla:  L88446
  Spy:  SPy2000
  Sau:  SA0201 SA0229 SA0850 SA2255
  Lin:  lin0182
  Bsu:  BS_appA
  Bha:  BH0031 BH0347 BH0567 BH1016 BH1796 BH2074 BH2754
        BH3026 BH3636 BH3644
  Syn:  sll1699 slr1740
  Nos:  alr0140 alr3762 alr3884
  Eco:  ddpA dppA nikA yliB
  EcZ:  Z1054 Z2223 ZdppA ZnikA
  Ecs:  ECs0909 ECs2091 ECs4343 ECs4424
  Ype:  YPO2660 YPO4003
  Sty:  STM0849 STM1255 STM3630
  Vch:  VC0171 VC0620 VCA1098
  Pae:  PA4496 PA4497 PA4500 PA4502 PA5317
  Hin:  HI0853
  Pmu:  PM0236 PM0592
  Rso:  RSc0044 RSc1380 RSc1886 RSc2006 RSc2870
  Hpy:  HP0298
  jHp:  jhp0283
  Cje:  Cj1584c
  Atu:  AGc2215 AGc4574 AGc4687 AGl1330 AGl1481 AGl2748 AGl2768
        AGl2772 AGl2786 AGl2824 AGl2894 AGl3099 AGl3204 AGl325
        AGl3512 AGl3525 AGl444 AGl514 AGl687 AGl861 AGl873
        AGl975GM AGpA361 AGpA490 AGpA646 AGpA98 AGpT144 AGpT257
  Sme:  SMa0104 SMa0302 SMa0466 SMa1375 SMa1379 SMa1438 SMa1651
        SMa1860 SMa2075 SMb20108 SMb20144 SMb20476 SMb21037 SMb21215
        SMb21261 SMb21647 SMc00786 SMc01525 SMc01642 SMc01647 SMc02025
        SMc02415 SMc02417 SMc03124 SMc03269 SMc04037 SMc04293
  Bme:  BMEI0433 BMEI0434 BMEII0203 BMEII0210 BMEII0217 BMEII0284 BMEII0487
        BMEII0504 BMEII0859
  Mlo:  mll0599 mll1660 mll2276 mll4539 mll5121 mll5127 mll5441
        mll7034 mll7247 mll7343 mll7351 mll9136 mll9149 mlr0985
        mlr1186 mlr3265 mlr3395 mlr5416 mlr5513 mlr5892 mlr6082
        mlr6288 mlr6444 mlr6670 mlr6997 mlr8282 mlr9210 mlr9267
        mlr9269
  Ctr:  CT139 CT480
  Cpn:  CPn0197 CPn0599
_______

[P] COG0748 Putative heme iron utilization protein
  Syn:  ssr1698
  Nos:  asl4369 alr5027
  Vch:  VCA0907
  Pae:  PA4388
  Hin:  HI0854
  Pmu:  PM0042 PM0299
  Hpy:  HP0318
  jHp:  jhp0301
  Cje:  Cj1613c
  Atu:  AGc3862
  Sme:  SMc04457
  Mlo:  mlr2805
_______

[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains
  Sce:  YOR330c_2
  Aae:  aq_1967
  Tma:  TM1619_2
  Fnu:  FN0705_2
  Dra:  DR1707_2
  Cac:  CAC1098_2
  Cgl:  Cgl1317_2
  Mtu:  Rv1629_2
  MtC:  MT1665_2
  Mle:  ML1381_2
  Lla:  L0270_2
  Spy:  SPy0185_2
  Spn:  SP0032_2
  Sau:  SA1513_2
  Lin:  lin1600_2
  Bsu:  BS_polA_2
  Bha:  BH3153_2
  Syn:  slr0707_2
  Nos:  alr1254_2
  Eco:  polA_2
  EcZ:  ZpolA_2
  Ecs:  ECs4786_2
  Ype:  YPO0017_2
  Sty:  STM3999_2
  Vch:  VC0108_2
  Pae:  PA5493_2
  Hin:  HI0856_2
  Pmu:  PM1065_2
  Xfa:  XF1103_2
  Nme:  NMB1982_2
  NmA:  NMA0462_2
  Rso:  RSc2230_2
  Hpy:  HP1470_2
  jHp:  jhp1363_2
  Cje:  Cj0338c_2
  Atu:  AGc169_2
  Sme:  SMc02850_2
  Bme:  BMEI1825_2
  Mlo:  mlr3298_2
  Ccr:  CC3464_2
  Rpr:  RP776_2
  Rco:  RC1206_2
  Ctr:  CT493_2
  Cpn:  CPn0612_2
  Tpa:  TP0105_2
  Bbu:  BB0548_2
_______

[M] COG0750 Predicted membrane-associated Zn-dependent proteases 1
  Afu:  AF0053 AF1322
  Hbs:  VNG2012C VNG2019C
  Mac:  MA0243 MA2449
  Mth:  MTH1368
  Mja:  MJ0971
  Mka:  MK0813 MK0981
  Tac:  Ta0839 Ta1274 Ta1344m
  Tvo:  TVN0254 TVN0322 TVN0818
  Pho:  PH0256 PH0351
  Pab:  PAB1063 PAB2195
  Pya:  PAE1702
  Sso:  SSO0087
  Ape:  APE0209 APE0915
  Aae:  aq_1964
  Tma:  TM0890
  Fnu:  FN1322
  Dra:  DR1507
  Cac:  CAC1796 CAC2072
  Cgl:  Cgl1968
  Mtu:  Rv2869c
  MtC:  MT2937
  Mle:  ML1582
  Lla:  L181494
  Spy:  SPy1963
  Spn:  SP0263 SP0694
  Sau:  SA1105
  Lin:  lin1355
  Bsu:  BS_spoIVB BS_yluC
  Bha:  BH2420 BH2775
  Syn:  sll0862 slr0643 slr1821
  Nos:  all3418 all3971 alr2114
  Eco:  yaeL
  EcZ:  ZyaeL
  Ecs:  ECs0178
  Ype:  YPO1051
  Sty:  STM0223
  Vch:  VC2253
  Pae:  PA3649
  Hin:  HI0918
  Pmu:  PM1991
  Xfa:  XF1047
  Nme:  NMB0183
  NmA:  NMA0084
  Rso:  RSc1411
  Hpy:  HP0258 HP0980
  jHp:  jhp0242
  Cje:  Cj1068
  Atu:  AGc2553
  Sme:  SMc02095
  Bme:  BMEI0829
  Mlo:  mll0638
  Ccr:  CC1916
  Rpr:  RP161
  Rco:  RC0203
  Ctr:  CT072
  Cpn:  CPn0344
  Tpa:  TP0600
  Bbu:  BB0118
_______

[J] COG0751 Glycyl-tRNA synthetase, beta subunit
  Aae:  aq_2141
  Tma:  TM0217
  Fnu:  FN0070
  Lla:  L0360
  Spy:  SPy1688
  Spn:  SP1474
  Lin:  lin1495
  Bsu:  BS_glyS
  Bha:  BH1371
  Syn:  slr0220
  Nos:  alr4111
  Eco:  glyS
  EcZ:  ZglyS
  Ecs:  ECs4442
  Ype:  YPO4071
  Sty:  STM3655
  Buc:  BU135
  Vch:  VC0020
  Pae:  PA0008
  Hin:  HI0924
  Pmu:  PM1102
  Xfa:  XF1959
  Nme:  NMB1930
  NmA:  NMA0523
  Rso:  RSc0524
  Hpy:  HP0972
  jHp:  jhp0906
  Cje:  Cj1234
  Atu:  AGc1144
  Sme:  SMc00851
  Bme:  BMEI1529
  Mlo:  mlr7435
  Ccr:  CC1342
  Rpr:  RP849
  Rco:  RC1316
  Ctr:  CT796_2
  Cpn:  CPn0946_2
_______

[J] COG0752 Glycyl-tRNA synthetase, alpha subunit
  Aae:  aq_945
  Tma:  TM0216
  Fnu:  FN0069
  Lla:  L101560
  Spy:  SPy1689
  Spn:  SP1475
  Lin:  lin1496
  Bsu:  BS_glyQ
  Bha:  BH1370
  Syn:  slr0638
  Nos:  all1985
  Eco:  glyQ
  EcZ:  ZglyQ
  Ecs:  ECs4443
  Ype:  YPO4072
  Sty:  STM3656
  Buc:  BU136
  Vch:  VC0021
  Pae:  PA0009
  Hin:  HI0927
  Pmu:  PM1098
  Xfa:  XF1960
  Nme:  NMB1932
  NmA:  NMA0521
  Rso:  RSc0526
  Hpy:  HP0960
  jHp:  jhp0894
  Cje:  Cj0704
  Atu:  AGc1133
  Sme:  SMc00855
  Bme:  BMEI1530
  Mlo:  mlr7434
  Ccr:  CC1341
  Rpr:  RP850
  Rco:  RC1317
  Ctr:  CT796_1
  Cpn:  CPn0946_1
_______

[P] COG0753 Catalase
  Sce:  YDR256c YGR088w
  Spo:  SPCC757.07c
  Dra:  DR1998 DRA0259
  Cgl:  Cgl0256
  Sau:  SA1170
  Lin:  lin2920
  Bsu:  BS_katA BS_katB BS_katX
  Bha:  BH1306 BH1980
  Eco:  katE
  EcZ:  ZkatE
  Ecs:  ECs2438
  Ype:  YPO1207
  Sty:  STM1318
  Vch:  VC1585
  Pae:  PA2147 PA4236 PA4613
  Hin:  HI0928
  Pmu:  PM0032
  Nme:  NMB0216
  NmA:  NMA0050
  Rso:  RSp1581
  Hpy:  HP0485 HP0875
  jHp:  jhp0437 jhp0809
  Cje:  Cj1385
  Atu:  AGpA722
  Sme:  SMb20007 SMc00819
  Bme:  BMEII0893
  Mlo:  mlr2101
_______

[E] COG0754 Glutathionylspermidine synthase
  Syn:  sll0023
  Eco:  gsp_2 ygiC yjfC
  EcZ:  Zgsp_2 ZygiC ZyjfC
  Ecs:  ECs3873_2 ECs3926 ECs5162
  Ype:  YPO0660
  Sty:  STM3139_2 STM3188 STM4376
  Hin:  HI0929
  Hpy:  HP0233
  jHp:  jhp0218
  Cje:  Cj0372
  Atu:  AGc3820 AGc3823
  Ccr:  CC2361
_______

[O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
  Afu:  AF1980
  Mac:  MA1428
  Pya:  PAE3621
  Ape:  APE0072
  Aae:  aq_055 aq_2043
  Dra:  DR0348
  Cgl:  Cgl0437
  Mtu:  Rv0529
  MtC:  MT0551
  Mle:  ML2409
  Sau:  SA1495
  Bsu:  BS_hemX BS_resC
  Bha:  BH1579 BH3047
  Syn:  sll1513
  Nos:  all0936
  Eco:  ccmC
  EcZ:  ZccmC
  Ecs:  ECs3088
  Ype:  YPO2736
  Sty:  STM2252 STM3817
  Vch:  VC2055
  Pae:  PA1477
  Hin:  HI1091
  Pmu:  PM0007
  Xfa:  XF2457
  Nme:  NMB1803
  NmA:  NMA0660
  Rso:  RSc2985
  Hpy:  HP0378_2
  jHp:  jhp1003_2
  Cje:  Cj1013c_2
  Atu:  AGc4871
  Sme:  SMc03849
  Bme:  BMEI1851
  Mlo:  mlr8327
  Ccr:  CC3672
  Rpr:  RP830
  Rco:  RC1284
_______

[F] COG0756 dUTPase
  Sce:  YBR252w
  Spo:  SPAC644.05c
  Ecu:  ECU05g0280 ECU06g0430
  Aae:  aq_220
  Fnu:  FN1028
  Cac:  CAC1210 CAC1425
  Cgl:  Cgl1859
  Mtu:  Rv2697c
  MtC:  MT2771
  Mle:  ML1028
  Lla:  L181168 L42912 L48154 L58858
  Spy:  SPy0235
  Spn:  SP0021
  Lin:  lin1799
  Bsu:  BS_yncF BS_yosS
  Eco:  dut
  EcZ:  Zdut
  Ecs:  ECs4515
  Ype:  YPO0047
  Sty:  STM3731
  Buc:  BU560
  Pae:  PA5321
  Hin:  HI0954
  Pmu:  PM1154
  Xfa:  XF0150
  Nme:  NMB0893
  NmA:  NMA1112
  Rso:  RSc2463
  Hpy:  HP0865
  jHp:  jhp0799
  Atu:  AGc548
  Sme:  SMc00461
  Bme:  BMEI0358
  Mlo:  mll5345
  Ccr:  CC3713
  Rpr:  RP399
  Rco:  RC0546
  Ctr:  CT292
  Cpn:  CPn0059
  Tpa:  TP0885
_______

[E] COG0757 3-dehydroquinate dehydratase II
  Tma:  TM0349
  Fnu:  FN0046
  Dra:  DR0778
  Cac:  CAC0899
  Cgl:  Cgl0418
  Mtu:  Rv2537c
  MtC:  MT2612
  Mle:  ML0519
  Bsu:  BS_yqhS
  Bha:  BH2801
  Syn:  sll1112
  Nos:  alr2782
  Ype:  YPO3660
  Buc:  BU399
  Vch:  VC0297
  Pae:  PA0245 PA4846
  Hin:  HI0970
  Pmu:  PM1093
  Xfa:  XF0047
  Rso:  RSc2785 RSp1397
  Hpy:  HP1038
  jHp:  jhp0386
  Cje:  Cj0066c
  Atu:  AGc2456 AGl675
  Sme:  SMc01343
  Bme:  BMEI1061
  Mlo:  mll0207
  Ccr:  CC1882
_______

[LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
  Aae:  aq_1191
  Tma:  TM0250
  Fnu:  FN0571 FN1068
  Dra:  DR0120
  Cac:  CAC1784
  Cgl:  Cgl1982
  Mtu:  Rv2896c
  MtC:  MT2964
  Spy:  SPy1163
  Spn:  SP1266
  Sau:  SA1092
  Lin:  lin1313
  Bsu:  BS_smf
  Bha:  BH2468
  Syn:  slr1197
  Nos:  all1325 alr3452
  Eco:  smf
  EcZ:  Z4799 Zsmf
  Ecs:  ECs4151 ECs4280
  Ype:  YPO0243
  Sty:  STM3405
  Vch:  VC0048
  Pae:  PA0021
  Hin:  HI0985
  Pmu:  PM1599
  Xfa:  XF0924
  Nme:  NMB0116
  NmA:  NMA0158
  Rso:  RSc0068
  Hpy:  HP0333
  jHp:  jhp0316
  Cje:  Cj0634
  Atu:  AGc2400
  Sme:  SMc01363
  Bme:  BMEII0667
  Mlo:  mlr0689
  Ccr:  CC2447
  Rco:  RC0450
  Tpa:  TP0393
  Bbu:  BB0297
  Uur:  UU591
  Mpu:  MYPU_5470
_______

[S] COG0759 Uncharacterized conserved protein
  Aae:  aqq_01
  Tma:  TM1462
  Fnu:  FN0003
  Dra:  DR2150
  Cac:  CAC3737
  Mtu:  Rv3922c
  MtC:  MT4040.1
  Lla:  L122982
  Spy:  SPy0370
  Spn:  SP1873
  Sau:  SA1613
  Lin:  lin1778
  Bsu:  BS_ytjA
  Bha:  BH2828
  Syn:  ssl0331
  Nos:  asr1611
  Eco:  yidD
  Sty:  STM3841
  Vch:  VC0005
  Pae:  PA2045
  Hin:  HI1000
  Pmu:  PM1164
  Xfa:  XF0989
  Nme:  NMB1906
  NmA:  NMA0549
  Rso:  RSc0003
  Hpy:  HP1449
  jHp:  jhp1342
  Cje:  Cj0959c
  Atu:  AGc3208
  Sme:  SMc01007
  Bme:  BMEI0912
  Mlo:  mll0918
  Ccr:  CC0463
  Rpr:  RP351a
  Ctr:  CT473
  Cpn:  CPn0592
  Tpa:  TP0949a
  Bbu:  BB0143
_______

[O] COG0760 Parvulin-like peptidyl-prolyl isomerase
  Sce:  YJR017c
  Spo:  SPCC16C4.03
  Ecu:  ECU06g0330
  Aae:  aq_1694 aq_1695 aq_592
  Tma:  TM0912 TM1704
  Fnu:  FN0263 FN1320
  Dra:  DR0071 DR1063
  Cac:  CAC0279 CAC3215
  Lla:  L164604
  Spy:  SPy1390 SPy2037
  Spn:  SP0981
  Sau:  SA1659
  Lin:  lin1482 lin2322
  Bsu:  BS_prsA BS_yacD
  Bha:  BH1177
  Syn:  slr0208
  Nos:  all1363 all2677 all7316 alr1613 alr1925 alr1929
  Eco:  ppiC surA ybaU
  EcZ:  ZppiC ZsurA ZybaU
  Ecs:  ECs0058 ECs0495 ECs4709
  Ype:  YPO0494 YPO3153 YPO3873
  Sty:  STM0092 STM0452 STM3910
  Buc:  BU140 BU478
  Vch:  VC0445 VC1918 VCA0953
  Pae:  PA0027_2 PA0594 PA0699 PA1805 PA1996 PA3871 PA4176
  Hin:  HI0458 HI1004
  Pmu:  PM1208 PM1979
  Xfa:  XF0838 XF1191
  Nme:  NMB0281 NMB0345 NMB0346 NMB1238
  NmA:  NMA1407 NMA2141 NMA2142 NMA2206
  Rso:  RSc0516 RSc1715 RSc1744 RSc3181 RSp1534
  Hpy:  HP0175 HP0659 HP0977
  jHp:  jhp0161 jhp0604 jhp0911
  Cje:  Cj0596 Cj0694 Cj1289
  Atu:  AGc2045 AGc3099 AGl2623
  Sme:  SMc00234 SMc00581 SMc02451
  Bme:  BMEI0123 BMEI0845 BMEI1265 BMEII0954
  Mlo:  mll3467 mll7863 mlr0613 mlr9159
  Ccr:  CC1688 CC1894 CC3067
  Rpr:  RP576 RP822
  Rco:  RC0880 RC1272
  Tpa:  TP1016
  Bbu:  BB0108
_______

[IM] COG0761 Penicillin tolerance protein
  Aae:  aq_1739
  Tma:  TM1444
  Fnu:  FN1781_1
  Dra:  DR2164
  Cac:  CAC1847_1
  Cgl:  Cgl0997
  Mtu:  Rv1110 Rv3382c
  MtC:  MT1141 MT3490
  Mle:  ML1938
  Bsu:  BS_yqfP
  Bha:  BH1382
  Syn:  slr0348
  Nos:  all0985
  Eco:  lytB
  EcZ:  ZlytB
  Ecs:  ECs0032
  Ype:  YPO0477
  Sty:  STM0049
  Buc:  BU147
  Vch:  VC0685
  Pae:  PA4557
  Hin:  HI1007
  Pmu:  PM1664
  Xfa:  XF2416
  Nme:  NMB1831
  NmA:  NMA0624
  Rso:  RSc2442
  Hpy:  HP0400
  jHp:  jhp0981
  Cje:  Cj0894c
  Atu:  AGc1414
  Sme:  SMc00016
  Bme:  BMEI1459
  Mlo:  mlr7502
  Ccr:  CC3361
  Ctr:  CT859
  Cpn:  CPn1017
  Tpa:  TP0547
_______

[S] COG0762 Predicted integral membrane protein
  Tma:  TM1732
  Fnu:  FN1710
  Cac:  CAC2119
  Cgl:  Cgl2101
  Mtu:  Rv2146c
  MtC:  MT2205
  Mle:  ML0921
  Lla:  L119456
  Spy:  SPy1516
  Spn:  SP1663
  Sau:  SA1033
  Lin:  lin2135
  Bsu:  BS_ylmG
  Bha:  BH2548
  Syn:  ssl0353 ssr2142
  Nos:  asl0940 asl2061
  Eco:  yggT
  EcZ:  ZyggT
  Ecs:  ECs3828
  Ype:  YPO0943
  Sty:  STM3101
  Vch:  VC0459
  Pae:  PA0392
  Hin:  HI1036
  Pmu:  PM1314
  Rso:  RSp1385
  Hpy:  HP0644
  jHp:  jhp0589
  Cje:  Cj0844c
  Atu:  AGc4820
  Sme:  SMc03238
  Mlo:  mll4156
  Ccr:  CC3621
  Ctr:  CT645
  Cpn:  CPn0767
  Tpa:  TP0668
  Bbu:  BB0580
_______

[M] COG0763 Lipid A disaccharide synthetase
  Aae:  aq_1427
  Fnu:  FN0597
  Syn:  slr0015
  Nos:  alr2274
  Eco:  lpxB
  EcZ:  ZlpxB
  Ecs:  ECs0184
  Ype:  YPO1057
  Sty:  STM0229
  Vch:  VC2247
  Pae:  PA3643
  Hin:  HI1060
  Pmu:  PM1997
  Xfa:  XF1042
  Nme:  NMB0199
  NmA:  NMA0069
  Rso:  RSc1417
  Hpy:  HP0867
  jHp:  jhp0801
  Cje:  Cj0288c
  Atu:  AGc2563
  Sme:  SMc02089
  Bme:  BMEI0835
  Mlo:  mll0630
  Ccr:  CC1909
  Rpr:  RP321
  Rco:  RC0440
  Ctr:  CT411_2
  Cpn:  CPn0965_2
_______

[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
  Aae:  aq_056
  Tma:  TM0801
  Fnu:  FN0594
  Dra:  DR1074
  Cac:  CAC3571
  Lla:  L0188 L160425
  Spy:  SPy1746
  Spn:  SP0424
  Sau:  SA1901
  Lin:  lin2668
  Bsu:  BS_ycsD BS_ywpB
  Bha:  BH1850 BH3735
  Syn:  sll1605
  Nos:  all1643_2 alr2271
  Eco:  fabA fabZ
  EcZ:  Z1546 Z4857 ZfabA ZfabZ
  Ecs:  ECs0182 ECs1038 ECs1286 ECs4332
  Ype:  YPO1055 YPO1430 YPO1454
  Sty:  STM0227 STM1067
  Buc:  BU237_2
  Vch:  VC1483 VC2249
  Pae:  PA1610 PA3645
  Hin:  HI1062 HI1325
  Pmu:  PM0484 PM1995
  Xfa:  XF0572 XF0774 XF1044
  Nme:  NMB0179
  NmA:  NMA0088
  Rso:  RSc0432_2 RSc1415 RSp0367_2
  Hpy:  HP1376
  jHp:  jhp1290
  Cje:  Cj0273
  Atu:  AGc246 AGc2558 AGc2940
  Sme:  SMc00328 SMc02092 SMc04277
  Bme:  BMEI0832 BMEI1956
  Mlo:  mll0634 mll5569
  Ccr:  CC1912 CC3720
  Rpr:  RP008
  Rco:  RC0009
  Ctr:  CT532
  Cpn:  CPn0651
_______

[E] COG0765 ABC-type amino acid transport system, permease component
  Afu:  AF0232
  Mac:  MA0787
  Pya:  PAE2000
  Ape:  APE1892
  Tma:  TM0592
  Fnu:  FN0802
  Dra:  DR0565 DR1028 DR2155 DR2277
  Cac:  CAC0111_2 CAC0377 CAC0878 CAC3326 CAC3619
  Cgl:  Cgl1299 Cgl1907 Cgl1908
  Lla:  L163056 L165_2 L38650
  Spy:  SPy0277_2 SPy0904 SPy1276 SPy1315_2 SPy1507 SPy1658
  Spn:  SP0453_2 SP0607 SP0608 SP0710 SP0711 SP0823 SP1241_2
        SP1461 SP1502
  Sau:  SA1675_2 SA2201
  Lin:  lin0840_2 lin1851 lin2352_2 lin2441 lin2442
  Bsu:  BS_glnM BS_glnP BS_yckA BS_yckJ BS_yqiY BS_ytmL BS_ytmM
        BS_yxeN
  Bha:  BH0171 BH1462
  Syn:  sll1270_2
  Nos:  alr3187_2 alr4166
  Eco:  glnP gltJ gltK yecS yhdY
  EcZ:  ZglnP ZgltJ ZgltK ZyecS ZyhdY
  Ecs:  ECs0692 ECs0693 ECs0888 ECs2656 ECs4143
  Ype:  YPO1847 YPO2513 YPO2613 YPO2614 YPO3255 YPO3256 YPO4109
        YPO4110
  Sty:  STM0663 STM0664 STM0829 STM1634 STM1636 STM1952
  Vch:  VC0009 VC1360 VCA1038 VCA1040
  Pae:  PA0313 PA1257 PA1258 PA1340 PA1341 PA2202 PA2203
        PA4193 PA4194 PA5075
  Hin:  HI1079m
  Nme:  NMB0788 NMB1509
  NmA:  NMA0999 NMA1709
  Rso:  RSc0482 RSc0483 RSc2104 RSc2105 RSc2258 RSc2259 RSc3409
        RSp0480 RSp0933 RSp0934 RSp1576 RSp1577
  Hpy:  HP0939 HP1169 HP1170
  jHp:  jhp0874 jhp1096 jhp1097
  Cje:  Cj0467 Cj0468 Cj0901 Cj0919c Cj0920c Cj0940c
  Atu:  AGc2567 AGc2569 AGc2581 AGc2584 AGc2908 AGl1163 AGl1164
        AGl1255 AGl252 AGl255 AGl2810_1 AGl2927 AGl2929 AGl383
        AGl403 AGl405 AGl664 AGl666 AGl980GM AGpA329 AGpA330
        AGpA595 AGpA713 AGpA9_1
  Sme:  SMa0079 SMa0081 SMa0501 SMa0503 SMa2197 SMb20264 SMb20265
        SMb20429 SMb20430 SMb20975 SMb21095 SMb21136 SMb21137 SMc02120
        SMc03133 SMc03865 SMc03893
  Bme:  BMEI0112 BMEI0113 BMEI1209 BMEII0600
  Mlo:  mll3859 mll4276 mll5422 mlr2204 mlr3797 mlr3799 mlr4898
        mlr4899 mlr7135 mlr7136 mlr8153 mlr9614 mlr9615
  Ccr:  CC1440
  Rpr:  RP129
  Rco:  RC0171
  Ctr:  CT129
  Cpn:  CPn0192
_______

[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase
  Aae:  aq_1281
  Tma:  TM0108
  Fnu:  FN1520
  Dra:  DR1123
  Cac:  CAC2862 CAC3539
  Cgl:  Cgl0351 Cgl2505
  Mtu:  Rv1315
  MtC:  MT1355
  Mle:  ML1150
  Lla:  L113067 L134243
  Spy:  SPy0763 SPy1358
  Spn:  SP1081 SP1966
  Sau:  SA1902 SA1926
  Lin:  lin2670 lin2697
  Bsu:  BS_murA BS_murZ
  Bha:  BH3749 BH3784
  Syn:  slr0017
  Nos:  all0174
  Eco:  murA
  EcZ:  ZmurA
  Ecs:  ECs4068
  Ype:  YPO3569
  Sty:  STM3307
  Buc:  BU386
  Vch:  VC2514
  Pae:  PA4450
  Hin:  HI1081
  Pmu:  PM0180
  Xfa:  XF1415
  Nme:  NMB0011
  NmA:  NMA0258
  Rso:  RSc2953
  Hpy:  HP0648
  jHp:  jhp0593
  Cje:  Cj0858c
  Atu:  AGc953
  Sme:  SMc02305
  Bme:  BMEI1666
  Mlo:  mll6459 mll7251
  Ccr:  CC2350
  Rpr:  RP579
  Rco:  RC0883
  Ctr:  CT455
  Cpn:  CPn0571
  Tpa:  TP0029
  Bbu:  BB0472
_______

[Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component
  Aae:  aq_1530 aq_355
  Mtu:  Rv0167 Rv0168 Rv0587 Rv0588 Rv1964 Rv1965 Rv3500c
        Rv3501c
  MtC:  MT0176 MT0616 MT0617 MT2016 MT2017 MT3604 MT3605
  Mle:  ML2587 ML2588
  Syn:  slr1045 slr1344
  Nos:  alr4015
  Eco:  yrbE
  EcZ:  ZyrbE
  Ecs:  ECs4073
  Ype:  YPO3574
  Sty:  STM3312
  Vch:  VC2519
  Pae:  PA3211 PA4455
  Hin:  HI1086
  Pmu:  PM0175
  Xfa:  XF0420 XF1303
  Nme:  NMB1965
  NmA:  NMA0486
  Rso:  RSc0313 RSc2961
  Hpy:  HP1466
  jHp:  jhp1359
  Cje:  Cj1646
  Atu:  AGc3035
  Sme:  SMc00174
  Bme:  BMEI0965
  Mlo:  mll0801
  Ccr:  CC2318 CC3695
  Rpr:  RP096
  Rco:  RC0129
_______

[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
  Aae:  aq_1189 aq_556
  Tma:  TM0590 TM0870
  Fnu:  FN1155 FN1211
  Dra:  DR1868
  Cac:  CAC0329 CAC0506 CAC1245 CAC1246 CAC1247 CAC1688 CAC2130
        CAC3683 CAP0150
  Cgl:  Cgl0043 Cgl1962 Cgl2114
  Mtu:  Rv0016c Rv2163c Rv2864c
  MtC:  MT0019 MT2221 MT2933
  Mle:  ML0018 ML0908 ML1577
  Lla:  L137682 L89079
  Spy:  SPy1664
  Spn:  SP0336 SP1673
  Sau:  SA0038 SA1024 SA1381
  Lin:  lin0461 lin1477 lin2145
  Bsu:  BS_pbpA BS_pbpB BS_pbpC BS_spoVD BS_ykuA BS_yrrR
  Bha:  BH1411 BH1894 BH2572 BH2573 BH3389
  Syn:  sll1833
  Nos:  alr0718 alr5045
  Eco:  ftsI mrdA
  EcZ:  ZftsI ZmrdA
  Ecs:  ECs0088 ECs0673
  Ype:  YPO0549 YPO2604
  Sty:  STM0122 STM0640 STM1836 STM1910
  Buc:  BU222
  Vch:  VC0950 VC2407
  Pae:  PA2272 PA4003 PA4418
  Hin:  HI0032 HI1132
  Pmu:  PM0136 PM1924
  Xfa:  XF0792 XF1312
  Nme:  NMB0413
  NmA:  NMA2072
  Rso:  RSc0062 RSc2850
  Hpy:  HP1556 HP1565
  jHp:  jhp1464 jhp1473
  Cje:  Cj0525c Cj0652
  Atu:  AGc1971 AGc3810
  Sme:  SMa2295 SMc01860
  Bme:  BMEI0573
  Mlo:  mll1561
  Ccr:  CC1546 CC2560
  Rpr:  RP565 RP567
  Rco:  RC0852 RC0855
  Ctr:  CT270 CT682
  Cpn:  CPn0419 CPn0694
  Tpa:  TP0500 TP0760
  Bbu:  BB0136 BB0718
_______

[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase
  Mth:  MTH734
  Mka:  MK0752 MK0926
  Aae:  aq_1747
  Tma:  TM0237
  Fnu:  FN1225
  Dra:  DR0297
  Cac:  CAC0962 CAC2129 CAC2819
  Cgl:  Cgl0247 Cgl2113
  Mtu:  Rv2158c Rv3712
  MtC:  MT2217 MT3815
  Mle:  ML0909 ML2326
  Lla:  L114717 L53929
  Spy:  SPy0388 SPy1035
  Spn:  SP1530 SP1589
  Sau:  SA0876 SA1708
  Lin:  lin2144
  Bsu:  BS_murE
  Bha:  BH2571
  Syn:  slr0528 slr0938 slr2002_2
  Nos:  all1663 all3879_2 alr2717
  Eco:  murE
  EcZ:  ZmurE
  Ecs:  ECs0089
  Ype:  YPO0550
  Sty:  STM0123
  Buc:  BU221
  Vch:  VC2406
  Pae:  PA4417
  Hin:  HI1133
  Pmu:  PM0137
  Xfa:  XF0793
  Nme:  NMB0414
  NmA:  NMA2071
  Rso:  RSc2849
  Hpy:  HP1494
  jHp:  jhp1387
  Cje:  Cj1641
  Atu:  AGc3809
  Sme:  SMc01861
  Bme:  BMEI0574
  Mlo:  mll1560
  Ccr:  CC2559
  Rpr:  RP597
  Rco:  RC0912
  Ctr:  CT269
  Cpn:  CPn0418
  Tpa:  TP0933
  Bbu:  BB0201
_______

[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase
  Mac:  MA3630
  Mth:  MTH873
  Mja:  MJ0258
  Mka:  MK1590
  Aae:  aq_821
  Tma:  TM0236
  Fnu:  FN1461_2
  Dra:  DR0768
  Cac:  CAC2128
  Cgl:  Cgl2112
  Mtu:  Rv2157c
  MtC:  MT2216
  Mle:  ML0910
  Lla:  L141766
  Spy:  SPy1420
  Spn:  SP1670
  Sau:  SA1886
  Lin:  lin0849
  Bsu:  BS_murF
  Bha:  BH2570
  Syn:  slr1351
  Nos:  all0036
  Eco:  murF
  EcZ:  ZmurF
  Ecs:  ECs0090
  Ype:  YPO0551
  Sty:  STM0124
  Buc:  BU220
  Vch:  VC2405
  Pae:  PA4416
  Hin:  HI1134
  Pmu:  PM0138
  Xfa:  XF0794
  Nme:  NMB0416
  NmA:  NMA2068
  Rso:  RSc2848
  Hpy:  HP0740
  jHp:  jhp0677
  Cje:  Cj0795c
  Atu:  AGc3808
  Sme:  SMc01862
  Bme:  BMEI0575
  Mlo:  mll1559
  Ccr:  CC2558
  Rpr:  RP596
  Rco:  RC0911
  Ctr:  CT756
  Cpn:  CPn0899
  Tpa:  TP0386
  Bbu:  BB0304
_______

[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase
  Mth:  MTH532
  Mka:  MK0995
  Aae:  aq_2075
  Tma:  TM0234
  Fnu:  FN1458
  Dra:  DR2496
  Cac:  CAC3194
  Cgl:  Cgl2110
  Mtu:  Rv2155c
  MtC:  MT2214
  Mle:  ML0912
  Lla:  L0237
  Spy:  SPy1525
  Spn:  SP0688
  Sau:  SA1026
  Lin:  lin2142
  Bsu:  BS_murD
  Bha:  BH2567
  Syn:  sll2010
  Nos:  alr4112
  Eco:  murD
  EcZ:  ZmurD
  Ecs:  ECs0092
  Ype:  YPO0553
  Sty:  STM0126
  Buc:  BU218
  Vch:  VC2403
  Pae:  PA4414
  Hin:  HI1136
  Pmu:  PM0140
  Xfa:  XF1118
  Nme:  NMB0420
  NmA:  NMA2064
  Rso:  RSc2846
  Hpy:  HP0494
  jHp:  jhp0446
  Cje:  Cj0432c
  Atu:  AGc3803
  Sme:  SMc01864
  Bme:  BMEI0577
  Mlo:  mll1557
  Ccr:  CC2556
  Rpr:  RP410
  Rco:  RC0560
  Ctr:  CT758
  Cpn:  CPn0901
  Tpa:  TP0903
  Bbu:  BB0585
_______

[D] COG0772 Bacterial cell division membrane protein
  Aae:  aq_025 aq_1139
  Tma:  TM0233 TM0839
  Fnu:  FN0042 FN1027
  Dra:  DR2497
  Cac:  CAC0505 CAC1251 CAC2126
  Cgl:  Cgl0044 Cgl2109
  Mtu:  Rv0017c Rv2154c
  MtC:  MT0020 MT2213
  Mle:  ML0019 ML0913
  Lla:  L107499 L115706 L62179
  Spy:  SPy0609
  Spn:  SP0803 SP1067
  Sau:  SA0962 SA1888
  Lin:  lin0441 lin1059 lin2521 lin2522 lin2834 lin2835
  Bsu:  BS_spoVE BS_ylaO BS_ywcF
  Bha:  BH2566 BH3275 BH3276 BH3360
  Syn:  slr1267
  Nos:  all0154 alr0653
  Eco:  ftsW mrdB
  EcZ:  ZftsW ZmrdB
  Ecs:  ECs0093 ECs0672
  Ype:  YPO0554 YPO2603
  Sty:  STM0127 STM0639
  Buc:  BU217
  Vch:  VC0949 VC2402
  Pae:  PA4002 PA4413
  Hin:  HI0031 HI1137
  Pmu:  PM0141 PM1925
  Xfa:  XF0796 XF1313
  Nme:  NMB0421
  NmA:  NMA2063
  Rso:  RSc0063 RSc2845
  Hpy:  HP0743 HP1560
  jHp:  jhp0680 jhp1468
  Cje:  Cj1038 Cj1282
  Atu:  AGc3801
  Sme:  SMc01865
  Bme:  BMEI0578
  Mlo:  mll1555
  Ccr:  CC1547 CC2552 CC3235
  Rpr:  RP280 RP411
  Rco:  RC0376 RC0561
  Ctr:  CT726 CT760
  Cpn:  CPn0867 CPn0903
  Tpa:  TP0387 TP0501
  Bbu:  BB0302 BB0719
_______

[M] COG0773 UDP-N-acetylmuramate-alanine ligase
  Aae:  aq_1360
  Tma:  TM0231
  Fnu:  FN1456
  Dra:  DR0627
  Cac:  CAC3225
  Cgl:  Cgl2107
  Mtu:  Rv2152c
  MtC:  MT2211
  Mle:  ML0915
  Lla:  L101678
  Spy:  SPy0345
  Spn:  SP1521
  Sau:  SA1561
  Lin:  lin1646
  Bsu:  BS_murC
  Bha:  BH3248
  Syn:  slr1423
  Nos:  alr5065
  Eco:  mpl murC
  EcZ:  ZmurC ZyjfG
  Ecs:  ECs0095 ECs5210
  Ype:  YPO0556 YPO3519
  Sty:  STM0129 STM4416
  Buc:  BU215
  Vch:  VC2400 VC2542
  Pae:  PA4020 PA4411
  Hin:  HI0121 HI1139
  Pmu:  PM0143 PM0929
  Xfa:  XF0276 XF0798
  Nme:  NMB0423 NMB1145 NMB1183
  NmA:  NMA1356 NMA2061
  Rso:  RSc2782 RSc2843
  Hpy:  HP0623
  jHp:  jhp0567
  Cje:  Cj1054c
  Atu:  AGc3796
  Sme:  SMc01867
  Bme:  BMEI0580
  Mlo:  mll1553
  Ccr:  CC2546
  Rpr:  RP247
  Rco:  RC0331
  Ctr:  CT762_1
  Cpn:  CPn0905_1
  Tpa:  TP0341
  Bbu:  BB0817
_______

[M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase
  Aae:  aq_1772
  Fnu:  FN0593
  Syn:  sll1508
  Nos:  alr2270
  Eco:  lpxC
  EcZ:  ZlpxC
  Ecs:  ECs0100
  Ype:  YPO0561
  Sty:  STM0134
  Vch:  VC2396
  Pae:  PA4406
  Hin:  HI1144
  Pmu:  PM0148
  Xfa:  XF0803
  Nme:  NMB0017
  NmA:  NMA0263
  Rso:  RSc2837
  Hpy:  HP1052
  jHp:  jhp0373
  Cje:  Cj0132
  Atu:  AGc3782
  Sme:  SMc01875
  Bme:  BMEI0586
  Mlo:  mll1545
  Ccr:  CC1985
  Rpr:  RP254
  Rco:  RC0339
  Ctr:  CT533
  Cpn:  CPn0652
_______

[F] COG0775 Nucleoside phosphorylase
  Mac:  MA3492 MA3560_2
  Tma:  TM1129
  Fnu:  FN1015
  Dra:  DR1451 DR1664
  Cac:  CAC2117
  Cgl:  Cgl0095 Cgl2742
  Mtu:  Rv0091 Rv2293c
  MtC:  MT0100 MT2350
  Lla:  L132777
  Spy:  SPy0447
  Spn:  SP0991
  Sau:  SA1427
  Lin:  lin1529
  Bsu:  BS_yrrU
  Bha:  BH1279 BH2690 BH3238
  Eco:  amn pfs
  EcZ:  Zamn Zpfs
  Ecs:  ECs0163 ECs2779
  Ype:  YPO2288 YPO3384
  Sty:  STM0207 STM2009
  Buc:  BU210
  Vch:  VC2379
  Pae:  PA3970
  Hin:  HI1216
  Pmu:  PM0194
  Nme:  NMB0767
  NmA:  NMA0978
  Rso:  RSc3374 RSp0214
  Hpy:  HP0089
  jHp:  jhp0082
  Cje:  Cj0117
  Atu:  AGc1849 AGc482
  Sme:  SMc00395 SMc02386
  Bme:  BMEI1318 BMEII0888
  Mlo:  mll7714 mlr6947
  Ccr:  CC0264 CC2266
  Ctr:  CT751
  Cpn:  CPn0232 CPn0894
  Tpa:  TP0170
  Bbu:  BB0375 BB0588 BBE07 BBI06
  Uur:  UU470
  Mpu:  MYPU_3360
_______

[L] COG0776 Bacterial nucleoid DNA-binding protein
  Tac:  Ta0093
  Tvo:  TVN0160
  Aae:  aq_1484a aq_2174
  Tma:  TM0266
  Fnu:  FN0818 FN1024
  Dra:  DRA0065
  Cac:  CAC3211
  Mtu:  Rv2986c_1
  MtC:  MT3064
  Mle:  ML1683_1
  Lla:  L102317 L102634
  Spy:  SPy1489
  Spn:  SP1113
  Sau:  SA1305
  Lin:  lin2048
  Bsu:  BS_hbs BS_yonN
  Bha:  BH1309 BH3356
  Syn:  sll1712
  Nos:  asr3935
  Eco:  himA himD hupA hupB
  EcZ:  ZhimA ZhimD ZhupA ZhupB
  Ecs:  ECs0494 ECs0995 ECs2419 ECs4923
  Ype:  YPO1393 YPO2427 YPO3154 YPO3731
  Sty:  STM0451 STM0982 STM1339 STM4170
  Buc:  BU032 BU131 BU308
  Vch:  VC0273 VC1222 VC1914 VC1919
  Pae:  PA1804 PA2738 PA3161 PA3940 PA5348
  Hin:  HI0430 HI1221 HI1313
  Pmu:  PM0628 PM0800 PM1732
  Xfa:  XF0743 XF1190 XF2437
  Nme:  NMB0729 NMB1230 NMB1302
  NmA:  NMA0938 NMA1397 NMA1516 NMA1868
  Rso:  RSc0910 RSc1583 RSc1714 RSc2521 RSc3359
  Hpy:  HP0835
  jHp:  jhp0774
  Cje:  Cj0913c
  Atu:  AGc2181 AGc2331 AGc589 AGpAbx237 AGpT222
  Sme:  SMc01134 SMc01786 SMc01906
  Bme:  BMEI0877 BMEI1179 BMEI1794
  Mlo:  mlr8425 msr3202 msr8478
  Ccr:  CC1370 CC1959 CC2331 CC3586
  Rpr:  RP171 RP524 RP708
  Rco:  RC0212 RC0757 RC1088
  Ctr:  CT267
  Cpn:  CPn0416
  Tpa:  TP0251
  Bbu:  BB0232
  Uur:  UU282
  Mpu:  MYPU_0870
  Mpn:  MPN529
  Mge:  MG353
_______

[I] COG0777 Acetyl-CoA carboxylase beta subunit
  Aae:  aq_445
  Fnu:  FN0408
  Dra:  DR1215
  Cac:  CAC3569
  Cgl:  Cgl0808_1
  Mtu:  Rv0904c_1
  MtC:  MT0927_1
  Lla:  L0180
  Spy:  SPy1744
  Spn:  SP0426
  Sau:  SA1523
  Lin:  lin1608
  Bsu:  BS_yttI
  Bha:  BH3166
  Syn:  sll0336
  Nos:  all2364
  Eco:  accD
  EcZ:  ZaccD
  Ecs:  ECs3200
  Ype:  YPO2768
  Sty:  STM2366
  Vch:  VC1000
  Pae:  PA0211 PA3112
  Hin:  HI1260
  Pmu:  PM0636
  Xfa:  XF1467
  Nme:  NMB0679
  NmA:  NMA0880
  Rso:  RSc1980
  Hpy:  HP0950
  jHp:  jhp0884
  Cje:  Cj0127c
  Atu:  AGc32
  Sme:  SMc02764
  Bme:  BMEI2020
  Mlo:  mlr5075
  Ccr:  CC3542
  Ctr:  CT293
  Cpn:  CPn0058
_______

[C] COG0778 Nitroreductase
  Afu:  AF0131 AF0226 AF2267
  Hbs:  VNG0935G
  Mac:  MA0330 MA1655 MA1774 MA2399 MA2742_2 MA2750_1 MA3208
        MA3441 MA3789
  Mth:  MTH116 MTH120 MTH933
  Mja:  MJ1384
  Mka:  MK1490
  Tac:  Ta0371 Ta0372
  Pab:  PAB0163 PAB0597 PAB1763
  Pya:  PAE2273 PAE2336
  Sso:  SSO2560
  Ape:  APE0084 APE0492 APE1044
  Aae:  aq_922
  Tma:  TM0120 TM0383 TM0386_2 TM1586
  Fnu:  FN1223 FN1254 FN1880
  Dra:  DR1271 DR1399 DR1968
  Cac:  CAC0718 CAC0748 CAC0850 CAC1418 CAC1484 CAC1551 CAC2311
        CAC2508 CAC2933_2 CAC3359_2 CAC3483_2 CAC3555
  Cgl:  Cgl0334 Cgl2773 Cgl2959
  Mtu:  Rv0306 Rv3262_2 Rv3368c
  MtC:  MT0319 MT3361_2 MT3477
  Mle:  ML0418 ML0758_2
  Lla:  L102062_2 L159954 L185517 L187716
  Spy:  SPy0512 SPy0739 SPy1069
  Spn:  SP0622 SP1710
  Sau:  SA0367 SA0757 SA2311
  Lin:  lin0151 lin0323 lin0488 lin0935 lin2216
  Bsu:  BS_ycnD BS_ydfN BS_ydgI BS_yfhC BS_yfkO BS_yodC BS_ywcG
  Bha:  BH0303 BH0405 BH1048 BH2236 BH2953 BH3859
  Syn:  slr1719
  Nos:  all1425 all1864 all4884
  Eco:  mdaA nfnB ycdI ydjA
  EcZ:  Z1507 ZmdaA ZnfnB ZydjA
  Ecs:  ECs0616 ECs0931 ECs1254 ECs2471
  Ype:  YPO2163
  Sty:  STM0578 STM0874 STM1296
  Vch:  VC0715 VC1048 VCA0637
  Pae:  PA1274 PA3208 PA3943 PA5190
  Hin:  HI1278 HI1542
  Pmu:  PM0161 PM0672 PM0733 PM1832
  Xfa:  XF2007
  Nme:  NMB0804 NMB1637
  NmA:  NMA1015 NMA1891
  Rso:  RSc0150 RSc0645 RSc0821 RSc1004 RSc1608 RSp0614
  Hpy:  HP0642 HP0954
  jHp:  jhp0586 jhp0888
  Cje:  Cj1066
  Atu:  AGc21 AGc3047 AGc3200 AGc4536 AGl768
  Sme:  SMc00166 SMc01012 SMc02781
  Bme:  BMEI0917 BMEI0918 BMEII0246
  Mlo:  mll0911 mll1278 mll7468 mlr4158
  Ccr:  CC0061 CC0324 CC1449 CC2653
_______

[S] COG0779 Uncharacterized protein conserved in bacteria
  Aae:  aq_260
  Tma:  TM1778
  Fnu:  FN2023
  Dra:  DR1796
  Cac:  CAC1798
  Cgl:  Cgl1942
  Mtu:  Rv2842c
  MtC:  MT2908
  Lla:  L173151
  Spy:  SPy1725
  Spn:  SP0552
  Sau:  SA1108
  Lin:  lin1358
  Bsu:  BS_ylxS
  Bha:  BH2417
  Syn:  slr0742
  Nos:  alr3828
  Eco:  yhbC
  EcZ:  ZyhbC
  Ecs:  ECs4051
  Ype:  YPO3498
  Sty:  STM3288
  Vch:  VC0641
  Pae:  PA4746
  Hin:  HI1282
  Pmu:  PM0761
  Xfa:  XF0233
  Nme:  NMB1641
  NmA:  NMA1895
  Rso:  RSc1287
  Hpy:  HP1046
  jHp:  jhp0379
  Cje:  Cj0138
  Atu:  AGc138
  Sme:  SMc02911
  Bme:  BMEI1968
  Mlo:  mlr5550
  Ccr:  CC0045
  Rpr:  RP554
  Rco:  RC0818
  Tpa:  TP0893
  Bbu:  BB0799
_______

[R] COG0780 Enzyme related to GTP cyclohydrolase I
  Pya:  PAE0317
  Ape:  APE1471
  Aae:  aq_931
  Tma:  TM0791
  Spn:  SP1777
  Sau:  SA0683
  Bsu:  BS_ykvM
  Bha:  BH2241
  Syn:  slr0711
  Nos:  all1162
  Eco:  yqcD_2
  EcZ:  ZyqcD_2
  Ecs:  ECs3654_2
  Ype:  YPO1034_2
  Sty:  STM2968_2
  Vch:  VC0902_2
  Pae:  PA2806_2
  Hin:  HI1291_2 HI1340_2
  Pmu:  PM0476_2
  Xfa:  XF2383_2
  Nme:  NMB0317
  NmA:  NMA2170
  Rso:  RSc0448_2
  Hpy:  HP1413
  jHp:  jhp1308
  Cje:  Cj1724c
  Atu:  AGc4128
  Sme:  SMc02723
  Bme:  BMEI0804
  Mlo:  mll8291
  Ccr:  CC2654
  Rpr:  RP072_2
  Rco:  RC0102_2
_______

[K] COG0781 Transcription termination factor
  Aae:  aq_133
  Tma:  TM1765
  Fnu:  FN1616
  Dra:  DR2067
  Cac:  CAC2084
  Cgl:  Cgl1580
  Mtu:  Rv2533c
  MtC:  MT2608_1
  Mle:  ML0523
  Lla:  L92686
  Spy:  SPy1818
  Spn:  SP0433
  Sau:  SA1355
  Lin:  lin1396
  Bsu:  BS_yqhZ
  Bha:  BH2785
  Syn:  sll0271
  Nos:  all1760
  Eco:  nusB
  EcZ:  ZnusB
  Ecs:  ECs0469
  Ype:  YPO3181
  Sty:  STM0418
  Buc:  BU463
  Vch:  VC2267
  Pae:  PA4052
  Hin:  HI1304
  Pmu:  PM0730
  Xfa:  XF0955
  Nme:  NMB0683
  NmA:  NMA0885
  Rso:  RSc0711
  Hpy:  HP0001
  jHp:  jhp0001
  Cje:  Cj0382c
  Atu:  AGc2167
  Sme:  SMc01778
  Bme:  BMEI1186
  Mlo:  mlr8411
  Ccr:  CC1360
  Rpr:  RP162
  Rco:  RC0204
  Ctr:  CT832
  Cpn:  CPn0989
  Tpa:  TP1015
  Bbu:  BB0107
  Uur:  UU300
  Mpu:  MYPU_1690
  Mpn:  MPN030
  Mge:  MG027
_______

[K] COG0782 Transcription elongation factor
  Tma:  TM1706
  Dra:  DR1162 DR1970 DR2375
  Cac:  CAC1965 CAC2430 CAC3198
  Cgl:  Cgl0961
  Mtu:  Rv1080c Rv3788
  MtC:  MT1111 MT3896
  Mle:  ML2393
  Lla:  L0140
  Spy:  SPy0349
  Spn:  SP1517
  Sau:  SA1438
  Lin:  lin1531
  Bsu:  BS_greA
  Bha:  BH1276
  Eco:  greA greBm rnk
  EcZ:  ZgreA ZgreB Zrnk
  Ecs:  ECs0649 ECs4060 ECs4248
  Ype:  YPO0135 YPO3505 YPO3695
  Sty:  STM0616 STM3299 STM3503
  Buc:  BU384
  Vch:  VC0634 VC2715 VCA0607
  Pae:  PA2859 PA4755 PA5274
  Hin:  HI0569 HI1331
  Pmu:  PM0715 PM1450
  Xfa:  XF1108
  Nme:  NMB0689 NMB1430
  NmA:  NMA0891 NMA1643
  Rso:  RSc1522 RSc2152 RSc2636
  Hpy:  HP0866
  jHp:  jhp0800
  Cje:  Cj0287c
  Atu:  AGc3965 AGl2534
  Sme:  SMa0149 SMa0229 SMa0232 SMc00347 SMc01218
  Bme:  BMEI0508 BMEI1377 BMEII0657
  Mlo:  mll2568 mll3993 mll3994 mlr7618
  Ccr:  CC2202 CC2848
  Rpr:  RP861
  Rco:  RC1332
  Ctr:  CT636_2
  Cpn:  CPn0741_2
  Tpa:  TP0019
  Bbu:  BB0132_2
  Uur:  UU304
  Mpu:  MYPU_5530
  Mpn:  MPN401
  Mge:  MG282
_______

[P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)
  Hbs:  VNG2443G
  Fnu:  FN1079
  Dra:  DR2263 DRB0092
  Cgl:  Cgl2943
  Lla:  L85575
  Spy:  SPy1531
  Spn:  SP1572
  Sau:  SA1941
  Lin:  lin0942
  Bsu:  BS_dps BS_mrgA
  Bha:  BH1018
  Syn:  slr1894
  Nos:  all0458 all1173 all4145 alr3808
  Eco:  dps
  EcZ:  Zdps
  Ecs:  ECs0890
  Ype:  YPO2510
  Sty:  STM0831
  Vch:  VC0139
  Pae:  PA0962
  Hin:  HI1349
  Pmu:  PM0817
  Xfa:  XF1382
  Rso:  RSc2687
  Hpy:  HP0243
  jHp:  jhp0228
  Cje:  Cj1534c
  Atu:  AGc4495 AGl212
  Bme:  BMEI1980
  Ccr:  CC2873
  Rpr:  RP806
  Rco:  RC1240
  Tpa:  TP1038
  Bbu:  BB0690
  Mpu:  MYPU_1570
_______

[T] COG0784 FOG: CheY-like receiver
  Afu:  AF0449 AF1042 AF1063 AF1256 AF1384 AF1472_1 AF1473
        AF1483_1 AF1898 AF2249 AF2419
  Hbs:  VNG0735G VNG0917G VNG0974G VNG2036G VNG2334C_1 VNG6035G_1 VNG7030_1
  Mac:  MA0016 MA0018 MA1267_1 MA1268 MA1269 MA1366 MA1468
        MA1469 MA2012 MA2013_3 MA2256_3 MA2445 MA2861 MA3068
        MA3405_1 MA4376 MA4377_4 MA4671
  Mth:  MTH1607_1 MTH1764_1 MTH440_1 MTH445 MTH446_1 MTH447_1 MTH457_1
        MTH548_1 MTH549 MTH901_1 MTH902_1
  Pho:  PH0482
  Pab:  PAB1330
  Sce:  YFL033c_2 YHR206w_2 YIL147c_3 YLR006c_2
  Spo:  SPAC1834.08_4 SPAC27E2.09_6 SPAC8C9.14_2 SPBC887.10 SPCC74.06_6
  Ecu:  ECU08g0970_2
  Tma:  TM0468 TM0700 TM0842 TM1360
  Dra:  DR0408 DR0731 DR1175_1 DR1418 DR2420 DRA0049 DRA0139
        DRA0204 DRA0350 DRA0355_2 DRA0356_1 DRA0357 DRB0028_3 DRB0029_1
  Cac:  CAC0117 CAC0122 CAC0585 CAC1233_2 CAC2071_1 CAC2218 CAC2407
        CAC3286_1
  Mtu:  Rv3143
  MtC:  MT3230
  Lin:  lin0697_2 lin0699
  Bsu:  BS_cheV_2 BS_cheY BS_spo0A_1 BS_spo0F BS_ycbB_1 BS_yneI BS_ywpD_1
  Bha:  BH1547_2 BH1712_2 BH2013_2 BH2262_2 BH2444 BH2715_1 BH2773_1
        BH2968 BH3446 BH3787
  Syn:  sll0038_2 sll0039 sll0043_4 sll0485_1 sll1228_3 sll1229_1 sll1291_2
        sll1292 sll1296_2 sll1555_1 sll1672_3 sll1673_1 sll1879 sll1905_1
        sll1905_5 slr0222_1 slr0322_2 slr0322_3 slr0474 slr0687_1 slr1037
        slr1041_2 slr1042 slr1213_1 slr1214_2 slr1305_1 slr1324_1 slr1400_1
        slr1588_1 slr1594_2 slr1693_2 slr1759_5 slr1759_6 slr1969_4 slr1982
        slr1983_2 slr2024 slr2041 slr2098_4 slr2098_5 slr2099_1 slr2104_4
  Nos:  all0182_3 all0521 all0637_1 all0638_2 all0729_1 all0729_8 all0823
        all0824_3 all0926_2 all0929 all0930_2 all0978_4 all1012_1 all1068_2
        all1071 all1072_2 all1177_1 all1178_3 all1279_1 all1281 all1388_1
        all1389_2 all1639_2 all1640 all1703_1 all1716_6 all1804_5 all1846_1
        all1846_4 all1914_4 all2094_1 all2161_2 all2164 all2165 all2239_1
        all2281_1 all2379_4 all2821 all2875_5 all2883_2 all2897_1 all2898
        all2955 all3232_1 all3239 all3275_4 all3759_1 all3764_1 all3765_1
        all3766 all3985_3 all4096_1 all4097_1 all4097_4 all4927 all4928
        all4963_1 all4963_4 all5172 all5173_3 all5210_6 all5308_1 all5309_3
        alr0264 alr0429_1 alr0442 alr0960 alr1086_1 alr1121_4 alr1230_1
        alr1231_1 alr1285_2 alr1485 alr1883_5 alr1967 alr1968_1 alr1968_4
        alr2049 alr2240 alr2241_1 alr2279_4 alr2280_1 alr2307_1 alr2428_3
        alr2428_8 alr2429 alr2726 alr3092_3 alr3120_6 alr3121_1 alr3158
        alr3159_1 alr3386 alr3442_3 alr3594 alr3671_1 alr3761_6 alr4878_2
        alr4879_1 alr4880_1 alr5251 alr5328 alr8518
  Eco:  arcB_2 barA_3 cheY evgS_3 hnr_1 rcsC_3 torS_2
  EcZ:  Z5692_2 ZarcB_2 ZbarA_3 ZcheY ZevgS_3 Zhnr_1 ZrcsC_3
        ZtorS_2
  Ecs:  ECs1148_2 ECs1737_1 ECs2592 ECs3107_3 ECs3249_3 ECs3646_3 ECs4089_2
        ECs5074_2
  Ype:  YPO0256_2 YPO1217_3 YPO1680 YPO2173_1 YPO3381_3 YPO3555_2 YPO3965_2
  Sty:  STM1392_2 STM1753_1 STM1916 STM2271_3 STM2314_2 STM2958_3 STM3328_2
        STM3826_2
  Vch:  VC0303_3 VC0622_2 VC1050_1 VC1081_1 VC1082 VC1086_1 VC1155
        VC1157 VC1316 VC1349_4 VC1398 VC1445_2 VC1602_2 VC1651_1
        VC1652_1 VC1653_3 VC1831_2 VC2006_2 VC2065 VC2202_2 VC2369_2
        VC2453_3 VCA0189_1 VCA0522_2 VCA0709_2 VCA0736_2 VCA0954_2 VCA1086_1
        VCA1096
  Pae:  PA0179 PA0267_1 PA0408 PA0409 PA0413_3 PA0928_3 PA1243_5
        PA1396_3 PA1456 PA1611_2 PA1976_3 PA1992_3 PA2137 PA2177_3
        PA2583_3 PA2798_1 PA2824_3 PA2881 PA3044_4 PA3271_4 PA3346_1
        PA3349_2 PA3462_3 PA3704_2 PA3946_4 PA3947_1 PA3974_3 PA4112_4
        PA4856_3 PA4959_1 PA4982_2 PA5364
  Hin:  HI0219a_1
  Pmu:  PM0313_2 PM1380_2
  Xfa:  XF0397 XF0401_1 XF0450 XF0973_2 XF1114_2 XF1330_3 XF1455_1
        XF1952_3 XF1955 XF2359 XF2611 XF2693
  Rso:  RSc0291 RSc0668 RSc0669 RSc0672_3 RSc0741 RSc2456_2 RSc2734
        RSc2737_1 RSc2738 RSc3079_3 RSc3387_1 RSp0598_2 RSp1402 RSp1409
        RSp1622_2 RSp1623_1 RSp1676_3
  Hpy:  HP0019_2 HP0392_2 HP0393_2 HP0616_2 HP1021_1 HP1067
  jHp:  jhp0017_2 jhp0358 jhp0403_1 jhp0559_2 jhp0988_2 jhp0989_2
  Cje:  Cj0284c_2 Cj0285c_2 Cj1118c Cj1608_1
  Atu:  AGc1264_2 AGc1913 AGc2385 AGc2521_3 AGc3010 AGc3610_1 AGc3613
        AGc3615 AGc3616_1 AGc3618 AGc376_1 AGc3927_2 AGc4237_3 AGc4388_3
        AGc598_3 AGc909 AGc917 AGc932_3 AGl1384_2 AGl1617_3 AGl1929
        AGl220 AGl2448 AGpA544 AGpA755_3
  Sme:  SMa0021 SMa0114 SMa0293 SMa0760 SMa0941 SMa1142_3 SMa1226
        SMa1558_2 SMa1573_1 SMa1688 SMa2065 SMb20356_2 SMb20357 SMb20358_2
        SMb20516 SMb20609_3 SMb20934 SMc00471_3 SMc00653 SMc00720 SMc00794_2
        SMc00888_2 SMc01128_3 SMc01371 SMc01504_2 SMc01953 SMc02249_3 SMc03006
        SMc03011 SMc03254 SMc04044 SMc04109_1 SMc04170
  Bme:  BMEI0372_2 BMEI0947_3 BMEI1606_3 BMEI1846 BMEII0050 BMEII0659
  Mlo:  mll0767_3 mll0861 mll2299 mll2300 mll2384_1 mll2384_3 mll2385_4
        mll3725_3 mll5691_3 mll6524 mll8067_6 mll9511_2 mll9592 mlr1132_2
        mlr1939 mlr2815 mlr3041 mlr3215_3 mlr3659_4 mlr3696 mlr3700
        mlr3786_2 mlr5738 mlr5739_1 mlr6689_3 mlr6690 mlr6691 msl3517
  Ccr:  CC0026_3 CC0138_2 CC0284 CC0432 CC0437 CC0440 CC0586_3
        CC0588 CC0591 CC0596 CC0630 CC0652_3 CC0723_2 CC0744
        CC0753 CC0921_2 CC0934_2 CC1078_2 CC1364 CC1705_2 CC2249
        CC2324_2 CC2463 CC2501_2 CC2521_2 CC2576 CC2632_2 CC2670_4
        CC2852_2 CC2874_3 CC2943_1 CC2971_4 CC2988_2 CC2993_2 CC3015
        CC3058_3 CC3075_2 CC3100 CC3102_2 CC3155 CC3162_2 CC3191_3
        CC3219_2 CC3225_3 CC3258 CC3286 CC3471 CC3477_2 CC3560_4
        CC3623_2
  Tpa:  TP0366
  Bbu:  BB0420_4 BB0551 BB0570 BB0672
_______

[O] COG0785 Cytochrome c biogenesis protein
  Afu:  AF1057
  Mac:  MA1129 MA1389 MA4255
  Mth:  MTH1746
  Pho:  PH1239
  Pab:  PAB0674
  Pya:  PAE1538 PAE2751
  Ape:  APE1722_2 APE2273_2
  Aae:  aq_731
  Tma:  TM1141
  Fnu:  FN0186 FN0804
  Dra:  DR1300
  Cgl:  Cgl0017 Cgl0435
  Mtu:  Rv0527 Rv2874_1 Rv2877c
  MtC:  MT0549 MT2942_1 MT2945
  Mle:  ML2411
  Spy:  SPy1559
  Spn:  SP0658 SP0999
  Bsu:  BS_ccdA
  Bha:  BH1194
  Syn:  sll0621 sll0686
  Nos:  alr2203 alr3122
  Hin:  HI1454
  Pmu:  PM1706
  Hpy:  HP0265
  jHp:  jhp0250
  Atu:  AGc3305
  Sme:  SMb20213_1 SMc00248
  Bme:  BMEII0683
  Mlo:  mll0838
  Tpa:  TP0101
_______

[E] COG0786 Na+/glutamate symporter
  Fnu:  FN0205 FN0793 FN1801
  Cgl:  Cgl2722
  Sau:  SA2135
  Syn:  slr0625 slr1145
  Eco:  gltS
  EcZ:  ZgltS
  Ecs:  ECs4529
  Ype:  YPO0035
  Sty:  STM3746
  Vch:  VCA0041
  Pae:  PA3176
  Hin:  HI1530
  Nme:  NMB0085
  NmA:  NMA0183
  Hpy:  HP1506
  jHp:  jhp1399
_______

[M] COG0787 Alanine racemase
  Spo:  SPBC359.02 SPCC965.08c
  Aae:  aq_1827
  Fnu:  FN0406 FN0491
  Dra:  DR1086
  Cac:  CAC0492 CAC3331
  Cgl:  Cgl0572
  Mtu:  Rv3423c
  MtC:  MT3532
  Mle:  ML0375
  Lla:  L0103
  Spy:  SPy1802
  Spn:  SP1698
  Sau:  SA1231 SA1874
  Lin:  lin0885
  Bsu:  BS_dal BS_yncD
  Bha:  BH0520
  Syn:  slr0827
  Nos:  alr2458
  Eco:  alr dadX
  EcZ:  Zalr ZdadX
  Ecs:  ECs1685 ECs5035
  Ype:  YPO0321 YPO1687
  Sty:  STM1802 STM4247
  Vch:  VC0372 VC1312
  Pae:  PA4930 PA5302
  Hin:  HI1575
  Pmu:  PM0413
  Xfa:  XF0852
  Nme:  NMB1651
  NmA:  NMA1906
  Rso:  RSc1371
  Hpy:  HP0941
  jHp:  jhp0876
  Cje:  Cj0905c
  Atu:  AGc1996 AGl3051
  Sme:  SMc00557
  Bme:  BMEII0374
  Mlo:  mll3997 mll6211 mlr9371
  Ccr:  CC1661
  Rpr:  RP095
  Rco:  RC0128
  Tpa:  TP0681
  Bbu:  BB0160
_______

[F] COG0788 Formyltetrahydrofolate hydrolase
  Hbs:  VNG1946G
  Aae:  aq_1818
  Dra:  DR0584
  Cgl:  Cgl0378
  Mtu:  Rv2964
  MtC:  MT3041
  Bsu:  BS_ykkE
  Bha:  BH3265
  Syn:  sll0070
  Nos:  alr1623
  Eco:  purU
  EcZ:  ZpurU
  Ecs:  ECs1734
  Sty:  STM1756
  Vch:  VC1992
  Pae:  PA4314 PA5420
  Hin:  HI1588
  Pmu:  PM0873
  Xfa:  XF1831
  Rso:  RSc1106 RSc1873 RSp0065
  Hpy:  HP1434
  jHp:  jhp1327
  Cje:  Cj0790
  Atu:  AGc4474 AGl1098 AGl1261
  Sme:  SMa2141 SMc03205 SMc04154
  Bme:  BMEII0387
  Ccr:  CC3630
_______

[K] COG0789 Predicted transcriptional regulators
  Afu:  AF0673
  Mac:  MA0989_1 MA1101
  Aae:  aq_702
  Fnu:  FN1743
  Dra:  DR0934 DR1111 DR1628 DR2306 DR2448_1 DR2519 DRA0252
  Cac:  CAC0461 CAC0766 CAC2451_1 CAC3443_1 CAC3458 CAC3475 CAC3507
        CAC3509 CAP0107 CAP0178
  Cgl:  Cgl1407 Cgl1409 Cgl2096 Cgl2557 Cgl2737
  Mtu:  Rv0353 Rv1828 Rv1830 Rv3334
  MtC:  MT0368 MT1876 MT1879 MT3438
  Mle:  ML2073 ML2075 ML2493
  Lla:  L0246 L0247 L35965 L36748 L67158
  Spy:  SPy1863 SPy1878
  Spn:  SP0501 SP0739 SP1856
  Sau:  SA1149 SA2002 SA2178 SA2296
  Lin:  lin0530 lin0806 lin0818 lin1096 lin1336 lin1622 lin1902
        lin2740 lin2870 lin2876
  Bsu:  BS_bltR_1 BS_bmrR_1 BS_glnR BS_mta BS_tnrA BS_ydfL_1 BS_yfmP
        BS_yhdQ BS_yraB BS_ywkC BS_yyaN
  Bha:  BH0408 BH1494 BH1706 BH3457 BH3496_1 BH3675 BH3858
        BH4046
  Syn:  sll0794_1 slr0701
  Nos:  all0345_1 alr1629 alr3162_1 alr3614 alr7637
  Eco:  soxR ybbI ycgE yehV yhdM
  EcZ:  ZsoxR ZybbI ZyehV ZyhdM
  Ecs:  ECs0545 ECs3014 ECs4157 ECs5045
  Ype:  YPO0236 YPO2337 YPO3085
  Sty:  STM0354 STM0499 STM1266 STM1390 STM2160 STM3412 STM4266
        STM4320
  Vch:  VC0277 VC0974 VCA0056 VCA0084 VCA0264_1
  Pae:  PA2016 PA2273 PA2718 PA2737 PA3689 PA4659 PA4778
        PA4878_1 PA5116
  Hin:  HI0186 HI0293 HI1623
  Pmu:  PM1941
  Xfa:  XF0744
  Nme:  NMB1303
  NmA:  NMA1517
  Rso:  RSc0280 RSc1584 RSc2322 RSc3347 RSp0137 RSp0320
  Hpy:  HP1025
  jHp:  jhp0399
  Cje:  Cj1230 Cj1563c
  Atu:  AGc1620 AGc1709 AGc2183 AGc2207 AGc2849 AGc3670_1 AGl1858gl
        AGpA269
  Sme:  SMa0281 SMa1014 SMb21187_1 SMb21579 SMc00109 SMc00182 SMc01260
        SMc01787
  Bme:  BMEI0054 BMEI0808 BMEI1178 BMEI1729 BMEII0467 BMEII1017
  Mlo:  mll1317 mll5312 mll5378 mlr2476 mlr2720 mlr5623 mlr8426
  Ccr:  CC0081 CC0694 CC1371 CC3082
  Rpr:  RP707
  Rco:  RC1087
_______

[R] COG0790 FOG: TPR repeat, SEL1 subfamily
  Sce:  YBL061c YDL203c YER096w YLR207w
  Spo:  SPAC1B3.10c SPAC24B11.10c SPBC1289.01c SPBC28F2.08c SPBC3E7.12c SPCC417.05c
  Ecu:  ECU02g1030 ECU06g0540 ECU07g0510 ECU11g0430
  Dra:  DR0484
  Eco:  ybeQ ybeT yjcO
  EcZ:  Z0793 ZybeQ ZybeT ZyjcO
  Ecs:  ECs0682 ECs0685 ECs5060
  Ype:  YPO1989_2
  Sty:  STM0437 STM0438 STM0654 STM1760 STM2007_2 STM4284
  Vch:  VC1194_1 VC2601 VCA1026
  Pae:  PA0360 PA3543 PA3978 PA4516 PA5086 PA5087 PA5088
  Hin:  HI1625
  Pmu:  PM0368 PM1611
  Nme:  NMB0419 NMB1327
  NmA:  NMA0184 NMA1541 NMA2065
  Rso:  RSc0024 RSc3362 RSp0631
  Hpy:  HP0160 HP0211 HP0235 HP0336 HP0519 HP0628 HP1098
        HP1117
  jHp:  jhp0148 jhp0197 jhp0220 jhp0318 jhp0468 jhp0571 jhp1024
        jhp1045 jhp1437
  Cje:  Cj0413
  Atu:  AGc1864 AGc3152 AGc883_2 AGl2168
  Sme:  SMa0013 SMc02078 SMc02231_1 SMc02392 SMc03995
  Bme:  BMEI0328 BMEI1094 BMEI1313 BMEII0466_1
  Mlo:  mll1100 mll5622_2 mlr0590 mlr1804_2 mlr3914 msr7720
  Ccr:  CC2039 CC2433 CC2477
_______

[M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
  Dra:  DR1325_2 DR1361 DR1749_2
  Cac:  CAC0308_2 CAC0309_2 CAC2663 CAC2943_2 CAC2944_2
  Cgl:  Cgl0662 Cgl1501 Cgl2139 Cgl2140
  Mtu:  Rv0024 Rv1115 Rv1477 Rv1478 Rv1566c Rv2190c
  MtC:  MT0027 MT1145 MT1524 MT1525 MT1617 MT2245
  Mle:  ML0885 ML1214 ML1811 ML1812
  Lla:  L123471_2 L15795 L161266 L70517 L82453
  Lin:  lin0198 lin0412_2 lin0591_4 lin2100_1 lin2648_2
  Bsu:  BS_lytE_2 BS_yddH_2 BS_yhdD_2 BS_ykfC BS_yojL_2 BS_yvcE_2 BS_ywtD
  Bha:  BH3007 BH3671_2
  Syn:  slr1474
  Nos:  alr3379
  Eco:  nlpC spr yafL ydhO
  EcZ:  Z0978_2 Z1377_2 Z1378_1 Z1819_2 Z2143_2 Z2351_2 Z3081_2
        Z3314_2 Z6032_2 ZnlpC Zspr ZyafL ZydhO
  Ecs:  ECs0254 ECs0840_2 ECs1117_2 ECs1558_2 ECs1646_2 ECs1986_2 ECs2163_2
        ECs2237_2 ECs2364 ECs2415 ECs2722_2 ECs2946_2 ECs3067
  Ype:  YPMT1.08c_2 YPO1275 YPO2123_2 YPO2385 YPO2415
  Sty:  STM0922_2 STM1046_2 STM1343 STM1432 STM1940 STM2214 STM2591_2
  Vch:  VC1537
  Pae:  PA0639_2 PA1198 PA1199 PA1844 PA3472
  Hin:  HI1314 HI1652
  Pmu:  PM0627
  Xfa:  XF0653 XF0654
  Nme:  NMB1433 NMB2001
  NmA:  NMA0440 NMA1645
  Rso:  RSc1177 RSc1314 RSc1695_2
  Hpy:  HP0087
  jHp:  jhp0080
  Cje:  Cj0946 Cj1653c
  Atu:  AGc1771 AGc363
  Sme:  SMc02827
  Bme:  BMEI1342 BMEI1950
  Mlo:  mlr5608
  Ccr:  CC2775 CC2936
  Ctr:  CT127
  Cpn:  CPn0245
_______

[L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase
  Aae:  aq_041
  Tma:  TM0253
  Fnu:  FN1370
  Dra:  DR2282
  Cac:  CAC1763
  Cgl:  Cgl1984
  Mtu:  Rv2898c
  MtC:  MT2966
  Mle:  ML1607
  Syn:  sll0189
  Nos:  alr1796
  Eco:  yraN
  EcZ:  ZyraN
  Ecs:  ECs4029
  Ype:  YPO3549
  Sty:  STM3265
  Vch:  VC0580
  Pae:  PA4424
  Hin:  HI1656
  Pmu:  PM0647
  Xfa:  XF0554
  Nme:  NMB2089
  NmA:  NMA0341
  Rso:  RSc3265
  Hpy:  HP0823
  jHp:  jhp0762
  Cje:  Cj0148c
  Atu:  AGc525
  Sme:  SMc00418
  Bme:  BMEI1769
  Mlo:  mlr4633
  Ccr:  CC0143
  Tpa:  TP0913
_______

[M] COG0793 Periplasmic protease
  Tac:  Ta1490_2
  Tvo:  TVN0895_2
  Pya:  PAE1302_2
  Sso:  SSO2098_2
  Aae:  aq_797
  Tma:  TM0747
  Fnu:  FN1205
  Dra:  DR1308 DR1491 DR1551
  Cac:  CAC0499
  Sau:  SA1253
  Lin:  lin1965
  Bsu:  BS_ctpA BS_yvjB
  Bha:  BH3599
  Syn:  slr0008 slr0257 slr1751
  Nos:  all1738 all2500 all3420 all4090
  Eco:  prc
  EcZ:  Zprc
  Ecs:  ECs2540
  Ype:  YPO1705
  Sty:  STM1845
  Vch:  VC1496 VCA0045
  Pae:  PA3257 PA5134
  Hin:  HI1668
  Pmu:  PM0269
  Xfa:  XF1823 XF1854 XF2704
  Nme:  NMB1332
  NmA:  NMA1546
  Rso:  RSc0352
  Hpy:  HP1350
  jHp:  jhp1269
  Cje:  Cj0511
  Atu:  AGc5034
  Sme:  SMb20928 SMc03783
  Bme:  BMEI0214
  Mlo:  mll4000
  Ccr:  CC2028 CC3435
  Rpr:  RP228
  Rco:  RC0310
  Ctr:  CT441
  Cpn:  CPn0555
  Tpa:  TP0277
  Bbu:  BB0359
_______

[M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation
  Afu:  AF1796
  Mac:  MA1384
  Mth:  MTH1546 MTH249
  Mja:  MJ1247
  Mka:  MK1663
  Pho:  PH1938_2
  Pab:  PAB1222_2
  Pya:  PAE1489
  Sso:  SSO0151
  Ape:  APE1940
  Aae:  aq_1546_1
  Fnu:  FN0903_1
  Cac:  CAC0397
  Sau:  SA0529
  Lin:  lin0502
  Bsu:  BS_yckF
  Eco:  gutQ_1 yrbH_1
  EcZ:  ZgutQ_1 ZyrbH_1
  Ecs:  ECs3564_1 ECs4076_1
  Ype:  YPO3577_1 YPO3638
  Sty:  STM2756 STM2838_1 STM3315_1
  Vch:  VC2523_1
  Pae:  PA4457_1
  Hin:  HI1678_1
  Pmu:  PM0525_1
  Xfa:  XF1413_1
  Nme:  NMB0352_1
  NmA:  NMA2135_1
  Rso:  RSc0413_1
  Hpy:  HP1429_1
  jHp:  jhp1324_1
  Cje:  Cj1443c_1
  Atu:  AGl2124_1
  Sme:  SMb20809_1 SMb20830_1 SMc02268_1
  Bme:  BMEII0021_1
  Mlo:  mll3023_1 mlr8483
  Ccr:  CC2263_1
  Rpr:  RP505_1
  Rco:  RC0661_1
  Ctr:  CT399_1
  Cpn:  CPn0526_1
_______

[R] COG0795 Predicted permeases
  Tma:  TM1735
  Fnu:  FN1030 FN1031
  Dra:  DR1075 DR2430 DR2431
  Syn:  sll0496 slr0882
  Nos:  alr4069
  Eco:  yjgP yjgQ
  EcZ:  ZyjgP ZyjgQ
  Ecs:  ECs5238 ECs5239
  Ype:  YPO3439 YPO3440
  Sty:  STM4479 STM4480
  Vch:  VC2499 VC2500
  Pae:  PA3827 PA3828
  Hin:  HI1703 HI1704
  Pmu:  PM0196 PM0197
  Xfa:  XF0139 XF0140
  Nme:  NMB1570 NMB1571
  NmA:  NMA1759 NMA1760
  Rso:  RSc2416 RSc2417
  Hpy:  HP0362 HP1498
  jHp:  jhp1018 jhp1391
  Cje:  Cj0313 Cj0826
  Atu:  AGc2050 AGc2052
  Sme:  SMc00583 SMc00584
  Bme:  BMEI1262 BMEI1263
  Mlo:  mll7865 mll7866
  Ccr:  CC0757 CC1155 CC1156 CC1690 CC1691
  Rpr:  RP769 RP871
  Rco:  RC1199 RC1345
  Ctr:  CT838 CT839
  Cpn:  CPn0995 CPn0996
  Tpa:  TP0883 TP0884
  Bbu:  BB0807 BB0808
_______

[M] COG0796 Glutamate racemase
  Aae:  aq_325
  Fnu:  FN1161
  Dra:  DR1586
  Cac:  CAC3250
  Cgl:  Cgl2459
  Mtu:  Rv1338
  MtC:  MT1379
  Mle:  ML1172
  Lla:  L0120
  Spy:  SPy0361
  Spn:  SP1881
  Sau:  SA0997
  Lin:  lin1200
  Bsu:  BS_racE BS_yrpC
  Bha:  BH3071
  Syn:  slr1746
  Nos:  alr0094
  Eco:  murI
  EcZ:  ZmurI
  Ecs:  ECs4898
  Ype:  YPO3909
  Sty:  STM4131
  Buc:  BU554
  Vch:  VC0158
  Pae:  PA4662
  Hin:  HI1739.2
  Pmu:  PM0917
  Nme:  NMB0458
  NmA:  NMA2026
  Rso:  RSc1956
  Hpy:  HP0549
  jHp:  jhp0496
  Cje:  Cj1652c
  Atu:  AGc3425
  Sme:  SMc00483
  Bme:  BMEI0795
  Mlo:  mlr0039
  Ccr:  CC3703
  Tpa:  TP0406
  Bbu:  BB0100
_______

[M] COG0797 Lipoproteins
  Aae:  aq_1174 aq_1370
  Cac:  CAP0058
  Syn:  slr0423 ssl3177
  Nos:  alr2935
  Eco:  rlpA
  EcZ:  ZrlpA
  Ecs:  ECs0671
  Ype:  YPO2602
  Sty:  STM0638
  Vch:  VC0948
  Pae:  PA4000 PA4485
  Hin:  HI0030
  Pmu:  PM1926
  Xfa:  XF2185
  Nme:  NMB0267
  NmA:  NMA2219
  Rso:  RSc3267
  Hpy:  HP1571
  jHp:  jhp1479
  Cje:  Cj0646
  Atu:  AGc2765 AGc498
  Sme:  SMc00404 SMc01187
  Bme:  BMEI0991 BMEI1992
  Mlo:  mll0427 mll4553
  Ccr:  CC1825
  Rpr:  RP390_2
  Rco:  RC0537_2
  Tpa:  TP0993
  Bbu:  BB0735
_______

[P] COG0798 Arsenite efflux pump ACR3 and related permeases
  Afu:  AF0475
  Mac:  MA3945
  Mth:  MTH900
  Pho:  PH0824 PH0888
  Sce:  YPR201w
  Tma:  TM1173
  Cac:  CAP0104
  Cgl:  Cgl0263 Cgl1435 Cgl1474
  Mtu:  Rv2643_1
  MtC:  MT2720_1
  Lin:  pli0038 pli0039
  Bsu:  BS_yqcL
  Syn:  slr0944
  Nos:  all7602 alr1097
  Pmu:  PM1943
  NmA:  NMA2095
  Atu:  AGc2750
_______

[S] COG0799 Uncharacterized homolog of plant Iojap protein
  Aae:  aq_1272
  Tma:  TM0147
  Dra:  DR2580
  Cgl:  Cgl2300
  Mtu:  Rv2420c
  MtC:  MT2493
  Mle:  ML1453
  Lla:  L28204
  Spy:  SPy0310
  Spn:  SP1744
  Sau:  SA1420
  Lin:  lin1521
  Bsu:  BS_yqeL
  Bha:  BH1328
  Syn:  slr1886
  Nos:  alr4169
  Eco:  ybeB
  EcZ:  ZybeB
  Ecs:  ECs0675
  Ype:  YPO2606
  Sty:  STM0642
  Vch:  VC0952
  Pae:  PA4005
  Hin:  HI0034
  Pmu:  PM1922
  Xfa:  XF2180
  Nme:  NMB2023
  NmA:  NMA0417
  Rso:  RSc2194
  Hpy:  HP1414
  jHp:  jhp1309
  Cje:  Cj1405
  Atu:  AGc5039
  Sme:  SMc03780
  Bme:  BMEI0210
  Mlo:  mll4005
  Ccr:  CC3432
  Rpr:  RP811
  Rco:  RC1253
  Ctr:  CT769
  Cpn:  CPn0915
  Tpa:  TP0738
  Bbu:  BB0784
_______

[G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase
  Tma:  TM0066
  Cac:  CAC0394 CAC2973
  Lla:  L0022
  Spy:  SPy0639
  Spn:  SP0317
  Bsu:  BS_kdgA
  Bha:  BH3723
  Syn:  sll0107
  Nos:  all4771
  Eco:  dgoA_1 eda
  EcZ:  Zeda
  Ecs:  ECs2560
  Ype:  YPO2067
  Sty:  STM1884
  Vch:  VC0285
  Pae:  PA3131 PA3181
  Hin:  HI0047
  Pmu:  PM0947
  Xfa:  XF1061
  Nme:  NMB1394
  NmA:  NMA1611
  Rso:  RSc2752 RSp1190
  Hpy:  HP1099
  jHp:  jhp1025
  Atu:  AGc1269 AGl750
  Sme:  SMc00882 SMc02043 SMc03153
  Bme:  BMEII0009 BMEII0358
  Mlo:  mlr2994 mlr4743
  Ccr:  CC0784 CC1495
  Tpa:  TP0568
_______

[H] COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
  Sce:  YNL256w_2
  Spo:  SPBC1734.03_2
  Aae:  aq_162
  Tma:  TM0041
  Fnu:  FN0072_2
  Dra:  DR0170
  Cac:  CAC2927_2
  Cgl:  Cgl2636
  Mtu:  Rv3606c
  MtC:  MT3711
  Mle:  ML0226
  Lla:  L0175_1
  Spy:  SPy1100
  Spn:  SP0292_2
  Sau:  SA0474
  Lin:  lin0258
  Bsu:  BS_folK
  Bha:  BH0095
  Syn:  slr1093
  Nos:  asr2953
  Eco:  folK
  EcZ:  ZfolK
  Ecs:  ECs0146
  Ype:  YPO3400
  Sty:  STM0183
  Vch:  VC0525 VC0593
  Pae:  PA0583 PA4728
  Hin:  HI0064
  Pmu:  PM0865
  Xfa:  XF0228 XF1456
  Nme:  NMB0745
  NmA:  NMA0958
  Rso:  RSc2628
  Hpy:  HP1036
  jHp:  jhp0388
  Cje:  Cj0065c
  Atu:  AGc2500
  Sme:  SMc00465
  Bme:  BMEI0954
  Mlo:  mll0786
  Ccr:  CC1551
  Rco:  RC0037_1 RC0038
  Ctr:  CT613_1
  Cpn:  CPn0758_1
_______

[R] COG0802 Predicted ATPase or kinase
  Aae:  aq_843
  Tma:  TM1632
  Fnu:  FN0929
  Dra:  DR2351
  Cac:  CAC2838
  Cgl:  Cgl0573
  Mtu:  Rv3422c
  MtC:  MT3531
  Mle:  ML0377
  Lla:  L44542
  Spy:  SPy1735
  Spn:  SP1944
  Sau:  SA1857
  Lin:  lin2184
  Bsu:  BS_ydiB
  Bha:  BH0545
  Syn:  sll0257
  Nos:  alr2300
  Eco:  yjeE
  EcZ:  ZyjeE
  Ecs:  ECs5144
  Ype:  YPO0369
  Sty:  STM4357
  Vch:  VC0343
  Pae:  PA4948
  Hin:  HI0065
  Pmu:  PM0902
  Xfa:  XF0758
  Nme:  NMB0457
  NmA:  NMA2027
  Rso:  RSc2540
  Hpy:  HP0716
  jHp:  jhp0654
  Cje:  Cj0668
  Atu:  AGc43_1
  Sme:  SMc02757_1
  Bme:  BMEI2026_1
  Mlo:  mll5086_1
  Ccr:  CC3534
  Rpr:  RP013
  Rco:  RC0013
  Ctr:  CT537
  Cpn:  CPn0657
  Tpa:  TP0875
  Bbu:  BB0186
  Mpu:  MYPU_1200
_______

[P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin
  Afu:  AF1983
  Hbs:  VNG6265G
  Mac:  MA0023
  Mth:  MTH604
  Pho:  PH0524
  Pab:  PAB1356
  Pya:  PAE0564
  Ape:  APE0531
  Aae:  aq_2166 aq_619
  Tma:  TM0123
  Fnu:  FN0668 FN1809 FN1812 FN1813
  Dra:  DR2523
  Cac:  CAC1593 CAC2836
  Cgl:  Cgl0027 Cgl2577
  Mtu:  Rv2059
  MtC:  MT2119
  Mle:  ML0337
  Lla:  L136652_1 L148957 L167426
  Spy:  SPy0453 SPy0714_1 SPy2007
  Spn:  SP1002 SP1650 SP2169_1
  Sau:  SA0587 SA2194_1
  Lin:  lin0191 lin1779 lin1961
  Bsu:  BS_ycdH BS_ytgA
  Bha:  BH0259 BH0516 BH2760
  Syn:  sll1598 slr2043
  Nos:  all0833 all1748 alr3576
  Ype:  YPO2439
  Sty:  STM2861
  Pae:  PA2407 PA2410
  Hin:  HI0362
  Pmu:  PM0400
  Nme:  NMB0586
  NmA:  NMA0789
  Cje:  Cj0143c
  Atu:  AGl3262 AGl798
  Sme:  SMc02509
  Mlo:  mll8313
  Rpr:  RP014
  Rco:  RC0014
  Ctr:  CT067 CT415
  Cpn:  CPn0349 CPn0541
  Tpa:  TP0034 TP0163
_______

[E] COG0804 Urea amidohydrolase (urease) alpha subunit
  Spo:  SPAC1952.11c_3
  Dra:  DRA0318
  Cgl:  Cgl0086
  Mtu:  Rv1850
  MtC:  MT1898
  Sau:  SA2084
  Bsu:  BS_ureC
  Bha:  BH0254
  Syn:  sll1750
  Nos:  alr3670
  EcZ:  ZureC ZureC.2
  Ecs:  ECs1324
  Ype:  YPO2667
  Pae:  PA4868
  Hin:  HI0539
  Rso:  RSc2032
  Hpy:  HP0072
  jHp:  jhp0067
  Atu:  AGc4357
  Sme:  SMc01837
  Bme:  BMEI0647 BMEI1652
  Mlo:  mll4940
  Uur:  UU432
_______

[U] COG0805 Sec-independent protein secretion pathway component TatC
  Afu:  AF1344 AF1512
  Hbs:  VNG2267G VNG2269G
  Mac:  MA4666 MA4667
  Tac:  Ta1225
  Tvo:  TVN0370
  Pya:  PAE1547
  Sso:  SSO0484 SSO3108
  Ape:  APE2154
  Aae:  aq_1267
  Dra:  DR0806
  Cgl:  Cgl1454
  Mtu:  Rv2093c
  MtC:  MT2154
  Mle:  ML1332
  Sau:  SA0334
  Lin:  lin0380
  Bsu:  BS_ycbT BS_ydiJ
  Bha:  BH0553 BH3906
  Syn:  sll0194
  Nos:  all2456
  Eco:  tatC
  EcZ:  ZtatC
  Ecs:  ECs4768
  Ype:  YPO3776
  Sty:  STM3975
  Vch:  VC0088
  Pae:  PA5070
  Hin:  HI0188
  Pmu:  PM1691
  Xfa:  XF0562
  Nme:  NMB0599
  NmA:  NMA0803
  Rso:  RSc2940
  Hpy:  HP1061
  jHp:  jhp0364
  Cje:  Cj0578c
  Atu:  AGc3132
  Sme:  SMc02065
  Bme:  BMEI1083
  Mlo:  mll1082
  Ccr:  CC2001
  Rpr:  RP782
  Rco:  RC1215
_______

[J] COG0806 RimM protein, required for 16S rRNA processing
  Aae:  aq_1057
  Tma:  TM1568
  Fnu:  FN0284
  Dra:  DR2010
  Cac:  CAC1757
  Cgl:  Cgl2003
  Mtu:  Rv2907c
  MtC:  MT2975
  Mle:  ML1616
  Lla:  L6876
  Spy:  SPy0847
  Spn:  SP0778
  Sau:  SA1082
  Lin:  lin1907
  Bsu:  BS_ylqE
  Bha:  BH2480
  Syn:  slr0808
  Nos:  alr2812
  Eco:  rimM
  EcZ:  ZyfjA
  Ecs:  ECs3471
  Ype:  YPO3294
  Sty:  STM2675
  Buc:  BU395
  Vch:  VC0562
  Pae:  PA3744
  Hin:  HI0203
  Pmu:  PM1296
  Xfa:  XF0108
  Nme:  NMB0591
  NmA:  NMA0794
  Rso:  RSc0934
  Hpy:  HP1149
  jHp:  jhp1076
  Cje:  Cj0712
  Atu:  AGc4896
  Sme:  SMc03860
  Bme:  BMEI0148
  Mlo:  mll4288
  Ccr:  CC3651
  Rpr:  RP348
  Rco:  RC0473
  Tpa:  TP0907
  Bbu:  BB0697
_______

[H] COG0807 GTP cyclohydrolase II
  Afu:  AF0484_2
  Tac:  Ta1014m
  Tvo:  TVN0575
  Sce:  YBL033c
  Spo:  SPAC1002.19 SPAP27G11.09c
  Aae:  aq_350_2
  Tma:  TM1826_2
  Fnu:  FN1508_2
  Dra:  DR0155_2
  Cac:  CAC0592_2
  Cgl:  Cgl1557_2
  Mtu:  Rv1415_2 Rv1940_2
  MtC:  MT1458_2 MT1990_2
  Mle:  ML0559_2
  Lla:  L0165_2
  Spn:  SP0176_2
  Sau:  SA1587_2
  Bsu:  BS_ribA_2
  Bha:  BH1556_2
  Syn:  sll1894_2
  Nos:  all3536_2
  Eco:  ribA
  EcZ:  ZribA
  Ecs:  ECs1850
  Ype:  YPO2222
  Sty:  STM1711
  Buc:  BU271
  Vch:  VC1263 VC2269_2
  Pae:  PA4047 PA4054_2
  Hin:  HI0212
  Pmu:  PM0677
  Xfa:  XF0953_2 XF1992
  Nme:  NMB1254 NMB1256_2
  NmA:  NMA1425 NMA1429_2
  Rso:  RSc0713_2
  Hpy:  HP0802 HP0804_2
  jHp:  jhp0738 jhp0740_2
  Cje:  Cj0572_2 Cj0996
  Atu:  AGc1366_2
  Sme:  SMc00008_2
  Bme:  BMEI1505_2
  Mlo:  mlr7463_2
  Ccr:  CC0887_2
  Ctr:  CT731_2
  Cpn:  CPn0872_2
_______

[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
  Aae:  aq_894
  Tma:  TM0574
  Fnu:  FN1330
  Dra:  DR1577
  Cac:  CAC2283
  Lla:  L16514
  Spy:  SPy1400
  Spn:  SP1416
  Sau:  SA1466
  Lin:  lin1566
  Bsu:  BS_queA
  Bha:  BH1227 BH2211
  Syn:  sll0467
  Nos:  alr1798
  Eco:  queA
  EcZ:  ZqueA
  Ecs:  ECs0456
  Ype:  YPO3192
  Sty:  STM0404 STM1548
  Buc:  BU132
  Vch:  VC0739
  Pae:  PA3824
  Hin:  HI0245
  Pmu:  PM0232
  Xfa:  XF1314
  Nme:  NMB1859
  NmA:  NMA0599
  Rso:  RSc2712
  Hpy:  HP1062
  jHp:  jhp0363
  Cje:  Cj0577c
  Atu:  AGc3086
  Sme:  SMc01207
  Bme:  BMEI0889
  Mlo:  mll0724
  Ccr:  CC1587
  Rpr:  RP213
  Rco:  RC0283
  Bbu:  BB0021
_______

[M] COG0810 Periplasmic protein TonB, links inner and outer membranes
  Aae:  aq_531
  Fnu:  FN1310 FN1832
  Nos:  all5036
  Eco:  tonB
  EcZ:  Z1799 ZtonB
  Ecs:  ECs1752
  Ype:  YPO2193 YPO3918
  Sty:  STM1737
  Vch:  VC1544 VCA0910
  Pae:  PA0197 PA0406 PA5531
  Hin:  HI0251
  Pmu:  PM1188
  Xfa:  XF0009 XF1957 XF2287 XF2327 XF2605
  Nme:  NMB1730
  NmA:  NMA1985
  Rso:  RSc1963 RSc2778
  Hpy:  HP0582 HP1341
  jHp:  jhp0529 jhp1260
  Cje:  Cj0181 Cj0753c Cj1630
  Atu:  AGc267
  Sme:  SMc01515
  Bme:  BMEI0363
  Mlo:  mll4165 msr1158
  Ccr:  CC3231
_______

[U] COG0811 Biopolymer transport proteins
  Mac:  MA0344 MA4426 MA4641
  Mth:  MTH1022 MTH671
  Mka:  MK0066
  Aae:  aq_1757 aq_1988
  Fnu:  FN1312 FN1834
  Dra:  DR0456
  Syn:  sll0477 sll1404 slr0677
  Nos:  all5047 alr0643 alr4587
  Eco:  exbB tolQ
  EcZ:  ZexbB ZtolQ
  Ecs:  ECs0772 ECs3890
  Ype:  YPO0682 YPO1121
  Sty:  STM0745 STM3159
  Vch:  VC1546 VC1547_2 VC1839 VCA0911
  Pae:  PA0198 PA0693_2 PA0969 PA1924 PA2983
  Hin:  HI0253 HI0385
  Pmu:  PM0970 PM1186
  Xfa:  XF0010 XF1079 XF1900
  Nme:  NMB1729
  NmA:  NMA1984
  Rso:  RSc0732 RSc1964 RSc2528
  Hpy:  HP1130 HP1339 HP1445
  jHp:  jhp1058 jhp1258 jhp1338
  Cje:  Cj0109 Cj0179 Cj1628
  Atu:  AGc264 AGl2236
  Sme:  SMc02085 SMc03958
  Bme:  BMEI0336 BMEI0365
  Mlo:  mll3891 mll4168
  Ccr:  CC2336 CC3233
  Rpr:  RP309
  Rco:  RC0422
  Ctr:  CT596
  Cpn:  CPn0785
_______

[M] COG0812 UDP-N-acetylmuramate dehydrogenase
  Aae:  aq_511 aq_520
  Tma:  TM1714
  Fnu:  FN1455
  Dra:  DR0628
  Cac:  CAC0510
  Cgl:  Cgl0352 Cgl0393
  Mtu:  Rv0482
  MtC:  MT0500
  Mle:  ML2447
  Lla:  L173881
  Spy:  SPy1101
  Spn:  SP1390
  Sau:  SA0693
  Lin:  lin1459
  Bsu:  BS_murB
  Bha:  BH2564
  Syn:  slr1424
  Nos:  alr5066
  Eco:  murB
  EcZ:  ZmurB
  Ecs:  ECs4899
  Ype:  YPO3760
  Sty:  STM4137
  Buc:  BU045
  Vch:  VC0318
  Pae:  PA2977
  Hin:  HI0268
  Pmu:  PM1589
  Xfa:  XF2572
  Nme:  NMB0811
  NmA:  NMA1021
  Rso:  RSc2550
  Hpy:  HP1418
  jHp:  jhp1313
  Cje:  Cj1676
  Atu:  AGc3794
  Sme:  SMc01868
  Bme:  BMEI0581
  Mlo:  mll1552
  Ccr:  CC2545
  Rpr:  RP248
  Rco:  RC0332
  Ctr:  CT831
  Cpn:  CPn0988
  Tpa:  TP0090
  Bbu:  BB0598
_______

[F] COG0813 Purine-nucleoside phosphorylase
  Sso:  SSO1519
  Fnu:  FN0435
  Dra:  DR2166
  Lla:  L156559
  Spy:  SPy0894
  Spn:  SP0835
  Sau:  SA0131 SA1940
  Lin:  lin1970
  Bsu:  BS_deoD
  Eco:  deoD
  EcZ:  ZdeoD
  Ecs:  ECs5343
  Ype:  YPO0440
  Sty:  STM4570
  Buc:  BU541
  Vch:  VC2347 VCA0053
  Hin:  HI0518
  Pmu:  PM1291
  Hpy:  HP1178
  jHp:  jhp1104
  Mlo:  mll0765
  Tpa:  TP0734
  Uur:  UU281
  Mpu:  MYPU_6450
  Mpn:  MPN062
  Mge:  MG049
_______

[E] COG0814 Amino acid permeases
  Sce:  YBL089w YEL064c YER119c YIL088c YJR001w YKL146w YNL101w
  Spo:  SPAC3H1.09c SPBC1685.07c
  Ecu:  ECU04g1190 ECU05g0160 ECU05g0580 ECU09g1190 ECU11g1740
  Cgl:  Cgl0474
  Eco:  mtr sdaC tdcC tnaB tyrP yhaO yhjV
        yqeG
  EcZ:  Z4165 Zmtr ZsdaC ZtdcC ZtnaB ZtyrP ZyhaO
        ZyhjV
  Ecs:  ECs2615 ECs3656 ECs3702 ECs3991 ECs3996 ECs4042 ECs4419
        ECs4646
  Ype:  YPO0277 YPO1209 YPO1285 YPO1321
  Sty:  STM1937 STM2970 STM3022 STM3239 STM3243 STM3279 STM3625
  Vch:  VC1301 VC1658 VCA0160 VCA0772
  Pae:  PA1916 PA3766 PA5434
  Hin:  HI0287 HI0289 HI0477 HI0528
  Pmu:  PM0037 PM0732 PM0810 PM1192 PM1419
  Nme:  NMB2031
  NmA:  NMA0409
  Hpy:  HP0133
  jHp:  jhp0121
  Cje:  Cj1625c
  Ctr:  CT817 CT818
  Cpn:  CPn0969 CPn0970
_______

[M] COG0815 Apolipoprotein N-acyltransferase
  Aae:  aq_819
  Tma:  TM0573
  Dra:  DR1353
  Cgl:  Cgl1445
  Mtu:  Rv2051c_1 Rv2261c Rv2262c
  MtC:  MT2111_1 MT2322
  Mle:  ML1441
  Syn:  slr0819
  Nos:  all0859
  Eco:  lnt
  EcZ:  Zlnt
  Ecs:  ECs0695
  Ype:  YPO2616
  Sty:  STM0666
  Vch:  VC0958
  Pae:  PA3984
  Hin:  HI0302
  Pmu:  PM1032
  Nme:  NMB0713
  NmA:  NMA0918
  Rso:  RSc0527
  Hpy:  HP0180
  jHp:  jhp0168
  Cje:  Cj1095
  Atu:  AGc629
  Sme:  SMc01111
  Bme:  BMEI1972
  Mlo:  mlr5543
  Ccr:  CC0052
  Rpr:  RP366
  Rco:  RC0495
  Ctr:  CT534
  Cpn:  CPn0653
  Tpa:  TP0252 TP0417
  Bbu:  BB0237
_______

[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)
  Aae:  aq_1498
  Tma:  TM1545
  Fnu:  FN0698
  Dra:  DR2509
  Cac:  CAC1680
  Cgl:  Cgl1593
  Mtu:  Rv2554c
  MtC:  MT2631
  Mle:  ML0513
  Lla:  L141748
  Spy:  SPy2113
  Sau:  SA1444
  Lin:  lin1537
  Bsu:  BS_yrrK
  Bha:  BH1269
  Syn:  sll1547
  Nos:  alr3100
  Eco:  yqgF
  EcZ:  ZyqgF
  Ecs:  ECs3825
  Ype:  YPO0937
  Sty:  STM3097
  Buc:  BU548
  Vch:  VC0466
  Pae:  PA0404
  Hin:  HI0305
  Pmu:  PM1870
  Xfa:  XF2227
  Nme:  NMB1337
  NmA:  NMA1551
  Rso:  RSc0676
  Hpy:  HP0334
  jHp:  jhp0317
  Cje:  Cj0635
  Atu:  AGc2423
  Sme:  SMc01355
  Bme:  BMEII0672
  Mlo:  mlr0681
  Ccr:  CC2439
  Rpr:  RP330
  Rco:  RC0455
  Ctr:  CT184
  Cpn:  CPn0237
  Uur:  UU370
  Mpu:  MYPU_5560
  Mpn:  MPN419
  Mge:  MG291.1
_______

[L] COG0817 Holliday junction resolvasome, endonuclease subunit
  Tma:  TM0575
  Fnu:  FN0214
  Dra:  DR0440
  Cgl:  Cgl1622
  Mtu:  Rv2594c
  MtC:  MT2671
  Mle:  ML0481
  Syn:  sll0896
  Nos:  all2297
  Eco:  ruvC
  EcZ:  ZruvC
  Ecs:  ECs2573
  Ype:  YPO2056
  Sty:  STM1898
  Vch:  VC1847
  Pae:  PA0965
  Hin:  HI0314
  Pmu:  PM0978
  Xfa:  XF1905
  Nme:  NMB1419
  NmA:  NMA1631
  Rso:  RSc0503
  Hpy:  HP0877
  jHp:  jhp0811
  Cje:  Cj1731c
  Atu:  AGl2221
  Sme:  SMc03967
  Bme:  BMEI0332
  Mlo:  mll3901
  Ccr:  CC3238
  Rpr:  RP119
  Rco:  RC0159
  Ctr:  CT502
  Cpn:  CPn0621
  Tpa:  TP0517
_______

[M] COG0818 Diacylglycerol kinase
  Tma:  TM0407
  Dra:  DR2093
  Cac:  CAC1294_1
  Lla:  L95012
  Spy:  SPy0475
  Spn:  SP0968
  Sau:  SA1398
  Lin:  lin1501
  Bsu:  BS_dgkA
  Bha:  BH1364
  Syn:  slr0054
  Nos:  all0270
  Eco:  dgkA
  EcZ:  Z1139 Z1578 ZdgkA
  Ecs:  ECs1316 ECs5025
  Ype:  YPO0313
  Sty:  STM4236
  Vch:  VCA0714
  Pae:  PA3603
  Hin:  HI0335
  Pmu:  PM1864
  Xfa:  XF2334
  Nme:  NMB1558
  NmA:  NMA1746
  Rso:  RSc2085
  Hpy:  HP0700
  jHp:  jhp0640
  Cje:  Cj0257
  Atu:  AGc3466
  Sme:  SMc04213
  Bme:  BMEI0970
  Mlo:  mll0823
_______

[K] COG0819 Putative transcription activator
  Tac:  Ta1485
  Tvo:  TVN0084
  Pho:  PH1160 PH1161
  Pab:  PAB1641 PAB1642
  Pya:  PAE0170
  Sso:  SSO2206 SSO2598
  Ape:  APE0669
  Sce:  YCR020c YOL055c_2 YPL258c_2 YPR121w_2
  Spo:  SPBP8B7.17c_2 SPBP8B7.18c_2
  Cgl:  Cgl1428_3
  Lla:  L0228
  Spn:  SP0716 SP0722
  Sau:  SA1897
  Lin:  lin0340
  Bsu:  BS_tenA
  Bha:  BH2679
  Nos:  alr2769
  Hin:  HI0358
  Pmu:  PM1264
  Hpy:  HP1287
  jHp:  jhp1207
  Cje:  Cj0440c
  Bme:  BMEI1738
_______

[R] COG0820 Predicted Fe-S-cluster redox enzyme
  Aae:  aq_1528 aq_416
  Tma:  TM0136 TM1715
  Fnu:  FN0526
  Dra:  DR0936
  Cac:  CAC1190 CAC1726
  Cgl:  Cgl1973
  Mtu:  Rv2879c Rv2880c
  MtC:  MT2947
  Lla:  L184159
  Spy:  SPy1533
  Spn:  SP0768
  Sau:  SA1061
  Lin:  lin0484
  Bsu:  BS_yloN
  Bha:  BH2506
  Syn:  sll0098
  Nos:  all0355
  Eco:  yfgB
  EcZ:  ZyfgB
  Ecs:  ECs3379
  Ype:  YPO2882
  Sty:  STM2525
  Buc:  BU286
  Vch:  VC0757
  Pae:  PA1839 PA3806
  Hin:  HI0365
  Pmu:  PM2007
  Xfa:  XF0459
  Nme:  NMB1308
  NmA:  NMA1522
  Rso:  RSc1212
  Hpy:  HP1428
  jHp:  jhp1325
  Cje:  Cj1713
  Atu:  AGc4846
  Sme:  SMc03831
  Bme:  BMEI1867
  Mlo:  mlr4359
  Ccr:  CC0134
  Tpa:  TP0068
  Uur:  UU214
_______

[I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
  Aae:  aq_1540
  Tma:  TM0891
  Fnu:  FN0478
  Dra:  DR0386
  Cac:  CAC1797
  Cgl:  Cgl1967
  Mtu:  Rv2868c
  MtC:  MT2936
  Mle:  ML1581
  Bsu:  BS_yqfY
  Bha:  BH1401
  Syn:  slr2136
  Nos:  all2501
  Eco:  gcpE
  EcZ:  ZgcpE
  Ecs:  ECs3377
  Ype:  YPO2879
  Sty:  STM2523
  Buc:  BU287
  Vch:  VC0759
  Pae:  PA3803
  Hin:  HI0368
  Pmu:  PM2010
  Xfa:  XF2575
  Nme:  NMB1310
  NmA:  NMA1524
  Rso:  RSc1215
  Hpy:  HP0625
  jHp:  jhp0569
  Cje:  Cj0686
  Atu:  AGc4936
  Sme:  SMc03888
  Bme:  BMEI0269
  Mlo:  mll3792
  Ccr:  CC0851
  Ctr:  CT057
  Cpn:  CPn0373
  Tpa:  TP0446
_______

[C] COG0822 NifU homolog involved in Fe-S cluster formation
  Afu:  AF0185 AF0565
  Hbs:  VNG2472G
  Mac:  MA0807 MA2717 MA3265
  Sce:  YOR226c YPL135w
  Spo:  SPAC227.13c
  Ecu:  ECU01g0510
  Aae:  aq_896
  Tma:  TM1372
  Fnu:  FN0059
  Cac:  CAC2565 CAC3292
  Cgl:  Cgl1523
  Mtu:  Rv1465
  MtC:  MT1512
  Mle:  ML0597
  Lla:  L31137
  Spy:  SPy0289
  Spn:  SP0870
  Sau:  SA0777
  Lin:  lin2507
  Bsu:  BS_yurV
  Bha:  BH0369 BH3468
  Nos:  all1456_1
  Eco:  iscU
  EcZ:  Z3796
  Ecs:  ECs3395
  Ype:  YPO2895
  Sty:  STM2542
  Buc:  BU603
  Vch:  VC0749
  Pae:  PA3813
  Hin:  HI0377
  Pmu:  PM0319
  Nme:  NMB1380
  NmA:  NMA1596
  Rso:  RSc1020
  Hpy:  HP0221_1
  jHp:  jhp0207_1
  Cje:  Cj0239c_1
  Atu:  AGc3210
  Sme:  SMc01006
  Bme:  BMEI0911
  Mlo:  mll0920 mll5941
  Ccr:  CC0462
  Rpr:  RP485
  Rco:  RC0729
  Ctr:  CT720_1
  Cpn:  CPn0861_1
  Tpa:  TP0615
  Bbu:  BB0085
  Uur:  UU453
  Mpu:  MYPU_1740
  Mpn:  MPN488
  Mge:  MG337
_______

[U] COG0823 Periplasmic component of the Tol biopolymer transport system
  Afu:  AF2374
  Mac:  MA1530 MA1540 MA1543 MA1548 MA2535_1
  Syn:  slr0195 slr0505
  Nos:  alr0943 alr0944
  Eco:  tolB
  EcZ:  ZtolB
  Ecs:  ECs0775
  Ype:  YPO1124 YPO1713
  Sty:  STM0748
  Vch:  VC1836
  Pae:  PA0972 PA3619
  Hin:  HI0382
  Pmu:  PM0967
  Xfa:  XF1897
  Rso:  RSc0735 RSp0279
  Hpy:  HP1126
  jHp:  jhp1055
  Cje:  Cj0112
  Atu:  AGc3050 AGl2244
  Sme:  SMc00162 SMc04461
  Bme:  BMEI0339
  Mlo:  mll3888
  Ccr:  CC3230
  Rpr:  RP302
  Rco:  RC0406
  Ctr:  CT599
  Cpn:  CPn0782
_______

[R] COG0824 Predicted thioesterase
  Hbs:  VNG1407C
  Mac:  MA1423
  Mth:  MTH658
  Tac:  Ta0797m
  Tvo:  TVN0706
  Pya:  PAE2469
  Sso:  SSO2295
  Ape:  APE0680
  Aae:  aq_1494
  Fnu:  FN1881
  Dra:  DR0902 DR2298
  Cac:  CAC0271 CAC2014
  Cgl:  Cgl2397
  Mtu:  Rv0163 Rv2475c
  MtC:  MT0172 MT2550
  Sau:  SA1185 SA2138 SA2325
  Lin:  lin1320
  Bsu:  BS_ynePm BS_ysmA
  Bha:  BH1999 BH2288 BH3090
  Syn:  sll0410 slr0204
  Nos:  alr2465 alr4079 alr4569
  Eco:  ybaW ybgC
  EcZ:  Z4859 ZybaW ZybgC
  Ecs:  ECs0497 ECs0771 ECs4334
  Ype:  YPO1120 YPO3151
  Sty:  STM0454 STM0744
  Vch:  VC1840 VC1938
  Pae:  PA0968 PA0988 PA2801 PA3130 PA5185 PA5329 PA5385
  Hin:  HI0386
  Pmu:  PM0971
  Xfa:  XF1901
  Nme:  NMB1959
  NmA:  NMA0492
  Rso:  RSc0731 RSc1773 RSc1827 RSp0038 RSp0364
  Hpy:  HP0496
  jHp:  jhp0448
  Cje:  Cj0965c
  Atu:  AGl2234 AGpA493_2
  Sme:  SMc00967 SMc01638_2 SMc03960
  Bme:  BMEI0335
  Mlo:  mll3892 mlr1489 mlr9041
  Ccr:  CC0356 CC2506 CC3234
  Tpa:  TP0156
_______

[I] COG0825 Acetyl-CoA carboxylase alpha subunit
  Aae:  aq_1206
  Fnu:  FN0409
  Dra:  DR1214
  Cac:  CAC3568
  Cgl:  Cgl0808_2
  Mtu:  Rv0904c_2
  MtC:  MT0927_2
  Lla:  L0190
  Spy:  SPy1743
  Spn:  SP0427
  Sau:  SA1522
  Lin:  lin1607
  Bsu:  BS_accA
  Bha:  BH3165
  Syn:  sll0728
  Nos:  alr5285
  Eco:  accA
  EcZ:  ZaccA
  Ecs:  ECs0187
  Ype:  YPO1060
  Sty:  STM0232
  Vch:  VC2244
  Pae:  PA3639
  Hin:  HI0406
  Pmu:  PM0292
  Xfa:  XF0203
  Nme:  NMB1139 NMB1177
  NmA:  NMA1349
  Rso:  RSc1169
  Hpy:  HP0557
  jHp:  jhp0504
  Cje:  Cj0443
  Atu:  AGl2394
  Sme:  SMc00690
  Bme:  BMEI0039
  Mlo:  mlr3576
  Ccr:  CC2995
  Ctr:  CT265
  Cpn:  CPn0414
_______

[O] COG0826 Collagenase and related proteases
  Mac:  MA0538 MA1709 MA4661
  Mth:  MTH1763 MTH645
  Mja:  MJ0090 MJ1657
  Mka:  MK0019 MK0904 MK0906
  Sso:  SSO1759 SSO2015
  Aae:  aq_1015
  Fnu:  FN1826 FN1931
  Dra:  DR2130
  Cac:  CAC1687 CAC2341 CAC2974
  Lla:  L52207 L54059
  Spy:  SPy0590 SPy0591
  Spn:  SP0801 SP1427 SP1429
  Sau:  SA1440 SA1441
  Lin:  lin0959 lin0960
  Bsu:  BS_yrrN BS_yrrO
  Bha:  BH1273 BH1274
  Nos:  all1741
  Eco:  ydcP yegQ yhbU yhbV
  EcZ:  ZydcP ZyegQ ZyhbU ZyhbV
  Ecs:  ECs2039 ECs2889 ECs4039 ECs4040
  Ype:  YPO2855 YPO3479 YPO3480
  Sty:  STM1604 STM2136 STM3274 STM3275
  Vch:  VC0651 VC0652 VC0717
  Pae:  PA3912 PA3913 PA5440
  Hin:  HI0419
  Pmu:  PM0233
  Nme:  NMB1664
  NmA:  NMA1923
  Rso:  RSp0969 RSp0970
  Hpy:  HP0169
  jHp:  jhp0155
  Cje:  Cj0701
  Atu:  AGl934 AGl935
  Sme:  SMa1291 SMa1292
  Bme:  BMEII0959 BMEII0960
_______

[L] COG0827 Adenine-specific DNA methylase
  Mja:  MJ1327a
  Cac:  CAC3534
  Mtu:  Rv3263
  MtC:  MT3363
  Mle:  ML0756
  Lla:  L74738
  Spy:  SPy0108
  Spn:  SP2045
  Sau:  SA1534
  Lin:  lin1617 pli0004
  Bsu:  BS_ytxK
  Bha:  BH3193
  Hin:  HI0513_1
  Hpy:  HP0054_2 HP0478 HP0910
  jHp:  jhp0430 jhp0846 jhp0928_1
  Atu:  AGpT188_1
  Mlo:  mll9333_1
  Mpn:  MPN107 MPN108 MPN111
_______

[J] COG0828 Ribosomal protein S21
  Aae:  aq_867a
  Cac:  CAC1288
  Lla:  L0398
  Spy:  SPy0779
  Spn:  SP1414
  Sau:  SA1404
  Lin:  lin1506
  Bsu:  BS_rpsU
  Bha:  BH1354
  Syn:  ssl0601
  Nos:  asr0742 asr0843 asr1955
  Eco:  rpsU
  EcZ:  ZrpsU
  Ecs:  ECs3948
  Ype:  YPO0645
  Sty:  STM3209
  Buc:  BU057
  Vch:  VC0520
  Pae:  PA0579
  Hin:  HI0531
  Pmu:  PM1239
  Xfa:  XF0434
  Nme:  NMB1950
  NmA:  NMA0502
  Rso:  RSc0008
  Hpy:  HP0562
  jHp:  jhp0509
  Cje:  Cj0370
  Atu:  AGl1581 AGl2379
  Sme:  SMc03934 SMc04320
  Bme:  BMEII0332
  Mlo:  msr3117
  Ccr:  CC3297
  Rpr:  RP615
  Rco:  RC0949
  Ctr:  CT342
  Cpn:  CPn0031
  Tpa:  TP0758
  Bbu:  BB0256
  Uur:  UU277
  Mpn:  MPN296
  Mge:  MG210a
_______

[O] COG0829 Urease accessory protein UreH
  Spo:  SPAC3A12.09c
  Dra:  DRA0311
  Cgl:  Cgl0090
  Sau:  SA2088
  Bha:  BH0258
  Syn:  sll1639
  Nos:  alr3666
  EcZ:  ZureD ZureD.2
  Ecs:  ECs1321
  Pae:  PA4864
  Hin:  HI0535
  Rso:  RSc2036
  Hpy:  HP0067
  jHp:  jhp0062
  Atu:  AGc4369
  Sme:  SMc01942
  Bme:  BMEI0643 BMEI1655
  Mlo:  mll4949
  Uur:  UU428
_______

[O] COG0830 Urease accessory protein UreF
  Spo:  SPAC29A4.13
  Dra:  DRA0313
  Cgl:  Cgl0088
  Mtu:  Rv1851
  MtC:  MT1899
  Sau:  SA2086
  Bha:  BH0256
  Syn:  slr1899
  Nos:  alr0734
  EcZ:  ZureF ZureF.2
  Ecs:  ECs1326
  Ype:  YPO2669
  Pae:  PA4892
  Hin:  HI0537
  Rso:  RSc2030
  Hpy:  HP0069
  jHp:  jhp0064
  Atu:  AGc4350
  Sme:  SMc01831
  Bme:  BMEI0645 BMEI1650
  Mlo:  mll4936
  Uur:  UU430
_______

[E] COG0831 Urea amidohydrolase (urease) gamma subunit
  Spo:  SPAC1952.11c_1
  Dra:  DRA0319_1
  Cgl:  Cgl0084
  Mtu:  Rv1848
  MtC:  MT1896
  Sau:  SA2082
  Bsu:  BS_ureA
  Bha:  BH0252
  Syn:  slr1256
  Nos:  alr3667
  EcZ:  ZureA ZureA.2
  Ecs:  ECs1322
  Ype:  YPO2665
  Pae:  PA4865
  Hin:  HI0541
  Rso:  RSc2035
  Hpy:  HP0073_1
  jHp:  jhp0068_1
  Atu:  AGc4368
  Sme:  SMc01941
  Bme:  BMEI0649 BMEI1654
  Mlo:  mll4948
  Uur:  UU434
_______

[E] COG0832 Urea amidohydrolase (urease) beta subunit
  Spo:  SPAC1952.11c_2
  Dra:  DRA0319_2
  Cgl:  Cgl0085
  Mtu:  Rv1849
  MtC:  MT1897
  Sau:  SA2083
  Bsu:  BS_ureB
  Bha:  BH0253
  Syn:  sll0420
  Nos:  alr3668
  EcZ:  ZureB ZureB.2
  Ecs:  ECs1323
  Ype:  YPO2666
  Pae:  PA4867
  Hin:  HI0540
  Rso:  RSc2033
  Hpy:  HP0073_2
  jHp:  jhp0068_2
  Sme:  SMc01939
  Bme:  BMEI0648 BMEI1653
  Mlo:  msl4944
  Uur:  UU433
_______

[E] COG0833 Amino acid transporters
  Sce:  YBR068c YBR069c YBR132c YCL025c YDR046c YDR160w YDR508c
        YEL063c YFL055w YGR191w YKR039w YLL061w YNL268w YNL270c
        YOL020w YOR348c YPL265w YPL274w
  Spo:  SPAC1039.09 SPAC869.10c SPAC869.11 SPAP7G5.06 SPBC1652.02 SPBC19F8.06c SPBC359.01
        SPBC359.03c SPBPB2B2.01 SPCC777.04 SPCC965.11c SPCPB1C11.02
  Cac:  CAC3164 CAC3347
  Lla:  L169610 L59950
  Sau:  SA1169 SA1505
  Lin:  lin0791
  Bsu:  BS_hutM BS_rocC BS_rocE BS_ybgF
  Eco:  lysP ykfD
  EcZ:  ZlysP
  Ecs:  ECs3048
  Ype:  YPO1309
  Sty:  STM2200 STM2357
  Pae:  PA4628 PA4981
  Rso:  RSc1757 RSc1758
  Hpy:  HP1017
  jHp:  jhp0406
_______

[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
  Afu:  AF0231 AF1766_1
  Mac:  MA0491_2 MA3914_1
  Pya:  PAE2096 PAE2954
  Ape:  APE1893
  Tma:  TM0593 TM1170_1
  Fnu:  FN0800 FN1187
  Dra:  DR0564 DR1027 DR2154 DR2278 DR2610 DRB0078
  Cac:  CAC0111_1 CAC0380 CAC0880 CAC3325 CAC3620
  Cgl:  Cgl1300 Cgl1906 Cgl2081 Cgl2693
  Mtu:  Rv0411c
  MtC:  MT0424
  Mle:  ML0303
  Lla:  L121253 L158343 L162009 L165_1
  Spy:  SPy0277_1 SPy0317 SPy0778 SPy0903 SPy1274 SPy1315_1
  Spn:  SP0112 SP0148 SP0453_1 SP0609 SP0620 SP1241_1 SP1394
        SP1500
  Sau:  SA1675_1 SA2202
  Lin:  lin0840_1 lin1849 lin2352_1 lin2443
  Bsu:  BS_glnH BS_yckB BS_yckK BS_yqiX BS_ytmJ BS_ytmK BS_yxeM
  Bha:  BH0170 BH1461 BH2949_1
  Syn:  sll0064 sll0174 sll0224 sll1104 sll1270_1 sll1762 slr0341
        slr1257_1 slr1257_3 slr2077_1
  Nos:  all2911_1 all2911_3 all4130 alr3187_1 alr3429 alr4164
  Eco:  argT artI artJ evgS_1 fliY glnH hisJ
        ybeJ yhdW
  EcZ:  ZargT ZartI ZartJ ZevgS_1 ZfliY ZglnH ZhisJ
        ZybeJ ZyhdW
  Ecs:  ECs0694 ECs0889 ECs0943 ECs0946 ECs2659 ECs3193 ECs3194
        ECs3249_1 ECs4141
  Ype:  YPO1351 YPO1846 YPO2512 YPO2615 YPO2774 YPO3257 YPO3343
        YPO4111
  Sty:  STM0665 STM0830 STM0887 STM0890 STM1633 STM1954 STM2354
        STM2355 STM4351
  Vch:  VC0010 VC1067_1 VC1362 VC1598 VC1603 VC1653_1 VC1863
        VC2622 VCA0557_1 VCA0583 VCA0759 VCA0978 VCA0981 VCA1039
  Pae:  PA0314 PA0575_1 PA0600_1 PA0777 PA0888 PA1260 PA1342
        PA1531 PA2204 PA2583_1 PA2902 PA2923 PA3261 PA3475
        PA3858 PA3865 PA3946_1 PA4027 PA4049 PA4195 PA5076
        PA5082 PA5137 PA5138 PA5139 PA5153 PA5270
  Hin:  HI1080 HI1179
  Pmu:  PM0124
  Nme:  NMB0787 NMB1612
  NmA:  NMA0997 NMA1811
  Rso:  RSc0084 RSc0122 RSc0481 RSc0973 RSc2103 RSc2257 RSc2261
        RSc2512 RSc3410 RSp0186 RSp0481 RSp0931 RSp1140 RSp1575
  Hpy:  HP0940 HP1172
  jHp:  jhp0875 jhp1099
  Cje:  Cj0734c Cj0817 Cj0921c Cj0982c
  Atu:  AGc2566 AGc2586 AGc2905 AGc3448 AGc4053 AGc4294 AGc849
        AGl1160 AGl251 AGl2811 AGl2813 AGl2931 AGl3135 AGl3137
        AGl385 AGl407 AGl667 AGl669 AGpA12 AGpA333 AGpA596
        AGpA714 AGpT67
  Sme:  SMa0082 SMa0495 SMa0506 SMa0677 SMa2199 SMb20175 SMb20263
        SMb20428 SMb20706 SMb20976 SMb21097 SMb21135 SMc00140 SMc00676
        SMc01205 SMc02118 SMc02219 SMc02259 SMc03131 SMc03864 SMc03891
  Bme:  BMEI0114 BMEI0115 BMEI1022 BMEI1104 BMEI1211 BMEI1627 BMEII0349
        BMEII0601
  Mlo:  mll3861 mll4278 mll5202 mll5423 mll5636 mll6987 mll9751
        mlr0549 mlr2201 mlr3796 mlr4789 mlr4897 mlr5654 mlr7133
        mlr8149
  Ccr:  CC1441
  Rpr:  RP150
  Rco:  RC0192
  Ctr:  CT381 CT486
  Cpn:  CPn0482 CPn0604
  Tpa:  TP0308 TP0309
_______

[NT] COG0835 Chemotaxis signal transduction protein
  Afu:  AF1044
  Hbs:  VNG0942G VNG0976G
  Mac:  MA0020 MA3070
  Pho:  PH0478
  Pab:  PAB1027
  Tma:  TM0701 TM0718
  Cac:  CAC0119 CAC1233_1 CAC2217 CAC2224
  Lin:  lin0697_1
  Bsu:  BS_cheV_1 BS_cheW
  Bha:  BH1712_1 BH2262_1 BH2969
  Syn:  sll0040 sll1293 slr1043
  Nos:  all0928 all1070 all2163
  Eco:  cheW
  EcZ:  ZcheW
  Ecs:  ECs2597
  Ype:  YPO1667
  Sty:  STM1920 STM2314_1
  Vch:  VC1402 VC1602_1 VC2006_1 VC2059 VC2202_1 VCA0954_1 VCA1093
        VCA1094
  Pae:  PA0177 PA0410 PA1464 PA3349_1 PA3705 PA3707
  Xfa:  XF1954
  Rso:  RSc0670 RSp0598_1 RSp1407
  Hpy:  HP0019_1 HP0391 HP0393_1 HP0616_1
  jHp:  jhp0017_1 jhp0559_1 jhp0988_1 jhp0990
  Cje:  Cj0283c Cj0285c_1
  Atu:  AGc3760 AGc4744
  Sme:  SMa1554 SMc01468 SMc03008 SMc03090
  Mlo:  mll9513 mll9516
  Ccr:  CC0434 CC0595 CC0764 CC3025
  Tpa:  TP0364_1 TP0439
  Bbu:  BB0312 BB0565 BB0670_1
_______

[M] COG0836 Mannose-1-phosphate guanylyltransferase
  Afu:  AF1097_1
  Hbs:  VNG2159Gm
  Mac:  MA3781_1
  Pho:  PH0925_1
  Pab:  PAB0818_1
  Aae:  aq_589_1
  Tma:  TM1033
  Dra:  DRA0032
  Cac:  CAC2968 CAC3058 CAC3072
  Syn:  sll1370
  Nos:  alr0188
  Eco:  cpsB_1
  EcZ:  ZcpsB_1 ZmanC_1
  Ecs:  ECs2836_1 ECs2854_1
  Ype:  YPO3099_1
  Sty:  STM2084_1 STM2105_1
  Vch:  VC0241_1
  Pae:  PA2232_1 PA3551_1 PA5452_1
  Xfa:  XF0259_1
  Hpy:  HP0043_1
  jHp:  jhp0037_1
  Atu:  AGl2939_1
  Sme:  SMb21082_1
  Bme:  BMEI1395_1 BMEII0900_1
  Mlo:  mlr5802_1 mlr7607_1
  Ccr:  CC3618
  Rco:  RC1039_2 RC1040
_______

[G] COG0837 Glucokinase
  Syn:  sll0593
  Nos:  alr2973
  Eco:  glk
  EcZ:  Zglk
  Ecs:  ECs3268
  Ype:  YPO2977
  Sty:  STM2403
  Pae:  PA3193
  Xfa:  XF1064 XF1460
  Nme:  NMB1390
  NmA:  NMA1607
  Rso:  RSp1557
  Hpy:  HP1103
  jHp:  jhp1029
  Atu:  AGc310
  Sme:  SMc02835
  Bme:  BMEII0251
  Mlo:  mlr4640
  Ccr:  CC2054 CC3167
_______

[C] COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A)
  Afu:  AF1828
  Hbs:  VNG0635G
  Mac:  MA1495
  Tac:  Ta0970m
  Tvo:  TVN1116
  Pya:  PAE3520
  Sso:  SSO0322
  Ape:  APE1430
  Aae:  aq_1310 aq_1385
  Dra:  DR1506
  Mtu:  Rv3145
  MtC:  MT3233
  Syn:  slr1279
  Nos:  all3842
  Eco:  nuoA
  EcZ:  ZnuoA
  Ecs:  ECs3172
  Ype:  YPO2555
  Sty:  STM2328
  Buc:  BU154
  Pae:  PA1883 PA2637
  Xfa:  XF0305
  Nme:  NMB0241
  NmA:  NMA0019
  Rso:  RSc2062
  Hpy:  HP1260
  jHp:  jhp1181
  Cje:  Cj1579c
  Atu:  AGc2340
  Sme:  SMa1533 SMc01912
  Bme:  BMEI1158
  Mlo:  mll1372
  Ccr:  CC1956
  Rpr:  RP357
  Rco:  RC0485
_______

[C] COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J)
  Afu:  AF1823
  Hbs:  VNG0641C VNG0642C
  Mac:  MA1501 MA1502
  Tac:  Ta0963 Ta0964
  Tvo:  TVN1109 TVN1110
  Sso:  SSO0327
  Ape:  APE1418
  Aae:  aq_1318 aq_1377
  Dra:  DR1496
  Mtu:  Rv3154
  MtC:  MT3242
  Syn:  sll0521
  Nos:  alr0225
  Eco:  nuoJ
  EcZ:  ZnuoJ
  Ecs:  ECs3164
  Ype:  YPO2547
  Sty:  STM2320
  Buc:  BU162
  Pae:  PA2645
  Xfa:  XF0314
  Nme:  NMB0253
  NmA:  NMA0006
  Rso:  RSc2053
  Hpy:  HP1269
  jHp:  jhp1190
  Cje:  Cj1570c
  Atu:  AGc2357
  Sme:  SMa1545 SMc01923
  Bme:  BMEI1149
  Mlo:  mll1358
  Ccr:  CC1941
  Rpr:  RP790
  Rco:  RC1224
_______

[NT] COG0840 Methyl-accepting chemotaxis protein
  Afu:  AF1034_2 AF1045_2
  Hbs:  VNG0355G VNG0614G VNG0793G VNG0806G VNG0812G VNG0958G_2 VNG1013G
        VNG1395G VNG1442G VNG1505G VNG1523G VNG1659G VNG1733G VNG1759G
        VNG1760G VNG1765G VNG1856G
  Mac:  MA0019 MA1624 MA3071 MA3914_2
  Pho:  PH0443 PH0479 PH0491 PH1852 PH1970
  Pab:  PAB1026 PAB1189 PAB1308 PAB1336 PAB2066
  Tma:  TM0014 TM0023 TM0429 TM0918 TM1143 TM1146 TM1428
        TM1682_1
  Dra:  DRA0352 DRA0353 DRA0354
  Cac:  CAC0120 CAC0250 CAC0381 CAC0432_2 CAC0433 CAC0443 CAC0542
        CAC0543 CAC0741 CAC0805 CAC0815 CAC0909 CAC1352 CAC1387
        CAC1524 CAC1579 CAC1600 CAC1601 CAC1703 CAC2419 CAC2420
        CAC2483 CAC2547 CAC2617 CAC2745 CAC2746 CAC2763 CAC2765
        CAC2774 CAC2803 CAC2821 CAC3243 CAC3352 CAC3388 CAC3397
        CAC3476 CAC3510 CAC3511 CAC3545 CAC3688 CAP0048
  Lin:  lin0731 lin1807_2
  Bsu:  BS_mcpA BS_mcpB BS_mcpC BS_tlpA BS_tlpB BS_tlpC BS_yfmS
        BS_yhfV BS_yoaH BS_yvaQ
  Bha:  BH0505 BH0565 BH0876_2 BH1006 BH1509 BH1827 BH2275
        BH3768 BH3863_2 BH3900_2 BH3903 BH3915
  Syn:  sll0041_4 sll0042 sll1294 sll1871_1 slr1044 slr1866
  Nos:  all0927 all1069_2 all2034 all2162
  Eco:  aer_2 tap tar trg tsr
  EcZ:  Zaer_2 Ztap Ztar Ztrg Ztsr
  Ecs:  ECs2026 ECs2595 ECs2596 ECs3954_2 ECs5315
  Ype:  YPMT1.11c_1 YPO0802 YPO1229 YPO1644_2 YPO1675 YPO2515_2 YPO4062
  Sty:  STM1626 STM1657 STM1919 STM3138 STM3152 STM3216 STM3217_2
        STM3577 STM4533
  Vch:  VC0098_2 VC0216 VC0282 VC0449 VC0512_2 VC0514 VC0825
        VC0840 VC1248 VC1289 VC1298 VC1313 VC1394 VC1403
        VC1405 VC1406_2 VC1413 VC1535 VC1643 VC1859 VC1868
        VC1898 VC1967 VC2161 VC2439 VCA0008 VCA0031 VCA0068
        VCA0176 VCA0220 VCA0268 VCA0658_2 VCA0663 VCA0773 VCA0864_2
        VCA0895_1 VCA0906 VCA0923 VCA0974 VCA0979 VCA0988_2 VCA1034
        VCA1056_2 VCA1069 VCA1088 VCA1092_2
  Pae:  PA0176 PA0180 PA0411 PA1251 PA1423_2 PA1561_2 PA1608
        PA1646 PA1930_2 PA2561 PA2573 PA2652 PA2654 PA2788
        PA2867 PA2920 PA3708 PA4290 PA4307 PA4309 PA4310
        PA4520 PA4633 PA4844 PA4915 PA5072
  Xfa:  XF1953
  Rso:  RSc0606 RSc0671 RSc1155 RSc1156 RSc1234 RSc1460 RSc1894
        RSc1950 RSc2799 RSc3136 RSc3307 RSc3412 RSp0255_2 RSp0303
        RSp0507 RSp0840 RSp0981 RSp1027 RSp1099 RSp1209 RSp1224_2
        RSp1363 RSp1406
  Hpy:  HP0082 HP0099 HP0103 HP0599
  jHp:  jhp0075 jhp0091 jhp0095 jhp0546
  Cje:  Cj0019c Cj0144 Cj0246c Cj0262c Cj0448c Cj0951c Cj1110c_2
        Cj1190c Cj1506c Cj1564
  Atu:  AGc1147 AGc1336_2 AGc1595 AGc1888 AGc3503 AGc3943 AGc4040
        AGc4283 AGc4747_2 AGc652 AGc678 AGc907 AGc929 AGl2218
        AGl2920_2 AGl2981 AGl3430_2 AGl949GM AGpA647 AGpT246_2
  Sme:  SMa1556 SMc00339_1 SMc00765 SMc00975 SMc01104 SMc01469 SMc01719
        SMc03004 SMc03087_2 SMc04227
  Mlo:  mll9517
  Ccr:  CC0066 CC0161 CC0343 CC0428 CC0430 CC0504 CC0589
        CC0593 CC1399 CC1655_2 CC2281 CC2317 CC2691 CC2810_2
        CC2842 CC2847 CC3145_2 CC3349_2 CC3358
  Tpa:  TP0040 TP0488 TP0639 TP0640
  Bbu:  BB0578 BB0596 BB0597 BB0680 BB0681
_______

[V] COG0841 Cation/multidrug efflux pump
  Mac:  MA0141
  Aae:  aq_695 aq_786
  Tma:  TM0372
  Fnu:  FN0474 FN0515 FN1275
  Dra:  DR0740
  Cac:  CAC0370
  Sau:  SA2056
  Bsu:  BS_yerP
  Bha:  BH3816
  Syn:  sll0142 slr0369 slr0454 slr2131
  Nos:  all3143 alr1656 alr4267 alr5294
  Eco:  acrB acrD acrF yegN yegO yhiV
  EcZ:  Z2507 Z2508 ZacrB ZacrD ZacrF.1 ZacrF.2 ZyegN
        ZyegO ZyhiV
  Ecs:  ECs0515 ECs1864 ECs2883 ECs2884 ECs3332 ECs4138 ECs4139
        ECs4394
  Ype:  YPO0421 YPO1001 YPO2848 YPO2849 YPO3043 YPO3133 YPO3482
  Sty:  STM0351 STM0475 STM2127 STM2128 STM2481 STM3391
  Vch:  VC0164 VC0629 VC0914 VC1673 VC1757 VCA0638
  Pae:  PA0158 PA0426 PA1436 PA2018 PA2494 PA2526 PA2527
        PA3522 PA3676 PA4207 PA4375 PA4598
  Hin:  HI0895
  Pmu:  PM1132
  Xfa:  XF0243 XF2083 XF2094 XF2385 XF2386
  Nme:  NMB1715
  NmA:  NMA1969
  Rso:  RSc0010 RSc1654 RSc3205 RSp0312 RSp0670_2 RSp0818 RSp1113
        RSp1198 RSp1199 RSp1458 RSp1597
  Hpy:  HP0607
  jHp:  jhp0554
  Cje:  Cj0366c Cj1033
  Atu:  AGc3721 AGc4340 AGc4508 AGc4621 AGl1281 AGl2075 AGl3088
        AGl3217 AGl494 AGpA548
  Sme:  SMa0875 SMa1662 SMa1884 SMb20345 SMb21498 SMc01095 SMc01457
        SMc01829 SMc02867 SMc03971
  Bme:  BMEI0893 BMEI1629 BMEI1645 BMEII0382 BMEII0473 BMEII0915 BMEII0916
  Mlo:  mll1426 mll3832 mll5518 mll5779 mll6730 mll7357 mlr2404
        mlr3285 mlr3649 mlr7298
  Ccr:  CC0807 CC1204 CC1788 CC3120 CC3197
  Rpr:  RP170
  Rco:  RC0211 RC0564 RC0565 RC0566 RC0567 RC0568 RC0569
  Bbu:  BB0140
_______

[V] COG0842 ABC-type multidrug transport system, permease component
  Afu:  AF1005 AF1302 AF1883
  Hbs:  VNG0669H
  Mac:  MA0846 MA0867 MA1597 MA2109 MA4205 MA4320 MA4681
  Mth:  MTH1092 MTH1486
  Mka:  MK0943
  Tac:  Ta0226 Ta0642 Ta0870 Ta1071
  Tvo:  TVN0526 TVN0936 TVN1040 TVN1368
  Pho:  PH0821 PH0911 PH1846 PH1848
  Pab:  PAB1704 PAB1924 PAB2069 PAB2071
  Pya:  PAE0270 PAE0316 PAE3065
  Sso:  SSO0051 SSO1143 SSO2135 SSO2646 SSO3168
  Ape:  APE1550 APE1827 APE1828 APE2512 APE2514 APE2578
  Sce:  YCR011c_3 YDR011w_2 YDR011w_4 YDR406w_2 YDR406w_4 YIL013c_2 YIL013c_4
        YNR070w_2 YNR070w_4 YOL075c_2 YOR011w_2 YOR011w_4 YOR153w_2 YOR153w_4
        YOR328w_2 YOR328w_4 YPL058c_2 YPL058c_4
  Spo:  SPAPB24D3.09c_2 SPAPB24D3.09c_4 SPCC18B5.01c_1 SPCC18B5.01c_3
  Ecu:  ECU03g0390_2 ECU07g0560_2
  Tma:  TM0387 TM0388 TM1100 TM1303 TM1304 TM1306 TM1326
        TM1404
  Dra:  DRA0008
  Cac:  CAC0170 CAC0171 CAC0237 CAC0238 CAC0242 CAC0243 CAC0834
        CAC0835 CAC0867 CAC0868 CAC2930 CAC2931 CAC3268 CAC3403
        CAC3404 CAC3609 CAC3610
  Cgl:  Cgl1421 Cgl1531 Cgl2007
  Mtu:  Rv1457c Rv1686c Rv1747_3 Rv2937 Rv2938
  MtC:  MT1504 MT1726 MT1789_3 MT3007 MT3008
  Mle:  ML0589 ML2350 ML2351
  Lla:  L120437 L51437
  Spy:  SPy0745 SPy0746
  Spn:  SP1063 SP2002
  Sau:  SA1157
  Lin:  lin0673 lin0925 lin0979 lin0986
  Bsu:  BS_yfiM BS_yfiN BS_yvfS
  Bha:  BH1055 BH1056 BH2099 BH2100 BH3892 BH3978
  Syn:  sll0760 sll0778_3
  Nos:  all4219 all7196_2 alr0076 alr1491 alr1500 alr2373
  Eco:  yadH ybhR ybhS yhhJ yhiH_2
  EcZ:  ZyadH ZybhR ZybhS ZyhhJ ZyhiH_2
  Ecs:  ECs0132 ECs0870 ECs0871 ECs4358 ECs4359_2
  Ype:  YPO3405
  Sty:  STM0173 STM0815 STM0816 STM3585 STM3586_2
  Vch:  VC0590 VC1608 VC1609
  Pae:  PA2811 PA3400 PA3401 PA5230 PA5231_2
  Pmu:  PM0471 PM1981 PM1982_2
  Xfa:  XF1222
  Rso:  RSc0165 RSc1975 RSc2955 RSp1015
  Hpy:  HP0611 HP0612 HP1486 HP1487
  jHp:  jhp0299 jhp1379 jhp1380
  Atu:  AGc3497 AGl429 AGl430_2
  Sme:  SMa0863 SMb20185 SMb21204 SMb21205 SMc04218
  Bme:  BMEI0654_2 BMEI0655 BMEI0656 BMEII0801
  Mlo:  mll4521 mlr4596 mlr6166
  Ccr:  CC1148 CC2244 CC3372
_______

[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1
  Hbs:  VNG0657G VNG2193Gm
  Pya:  PAE1337_1 PAE1357
  Sso:  SSO0044 SSO2657 SSO2973_1
  Ape:  APE0793_1 APE1623
  Sce:  Q0045 Q0065 Q0070
  Aae:  aq_2191 aq_2192
  Dra:  DR2620_1
  Cgl:  Cgl2472
  Mtu:  Rv3043c
  MtC:  MT3128
  Mle:  ML1728
  Sau:  SA0912
  Lin:  lin0014
  Bsu:  BS_ctaD BS_qoxB
  Bha:  BH0739 BH2065 BH2614
  Syn:  slr1137 slr2082
  Nos:  alr0951 alr2515 alr2732
  Eco:  cyoB
  EcZ:  ZcyoB
  Ecs:  ECs0485
  Ype:  YPO3165
  Sty:  STM0442
  Buc:  BU471
  Pae:  PA0106 PA1318
  Xfa:  XF1389
  Rso:  RSc0363 RSc1859 RSc2916 RSp1565
  Atu:  AGc1399 AGc227
  Sme:  SMb21370 SMb21488 SMc00010 SMc01983
  Bme:  BMEI1465 BMEI1900
  Mlo:  mll9630 mlr1041 mlr6847 mlr7491
  Ccr:  CC1772 CC3406
  Rpr:  RP405
  Rco:  RC0553
_______

[M] COG0845 Membrane-fusion protein
  Aae:  aq_1132 aq_1331 aq_1687 aq_294 aq_468 aq_698 aq_986
  Tma:  TM0353
  Fnu:  FN0516 FN0826 FN1274
  Dra:  DR0739
  Cac:  CAC0141 CAC0318 CAC0667 CAC3270 CAC3559 CAP0074
  Cgl:  Cgl2939
  Spy:  SPy0836 SPy2032
  Spn:  SP0785
  Sau:  SA0191
  Lin:  lin0232 lin0417
  Bsu:  BS_yknX BS_yvrP
  Bha:  BH3123 BH3672
  Syn:  sll0141 sll0180 sll1053 sll1181 sll1481 slr0793 slr1207
  Nos:  all0809 all2022 all2652 all2675 all3144 all5304 all5347
        all7010 all7314 all7619 all7632 alr0445 alr0451 alr1200
        alr1501 alr1505 alr1655 alr1928 alr3647 alr3710 alr4240
        alr4280 alr4973 alr5148 alr5293 alr7298
  Eco:  acrA acrE ybhG ybjY yegM yhiI yhiU
        ylcD
  EcZ:  Z0635 Z1015 Z1115 Z2509 Z3243 ZacrA ZacrE
        ZyhiI ZyhiU ZylcD
  Ecs:  ECs0516 ECs0544 ECs0612 ECs0873 ECs0964 ECs1863 ECs2882
        ECs4137 ECs4360 ECs4393
  Ype:  YPO0099 YPO0420 YPO1000 YPO1364 YPO1498 YPO2847 YPO2999
        YPO3132 YPO3483 YPO3919
  Sty:  STM0352 STM0476 STM0818 STM0941 STM2126 STM2692 STM3390
        STM3587 STM4260
  Vch:  VC0165 VC0628 VC0913 VC1447 VC1563 VC1564 VC1607
        VC1659 VC1674 VC1675 VC1756 VCA0639 VCA1080
  Pae:  PA0156 PA0157 PA0425 PA1247 PA1435 PA1877 PA2019
        PA2389 PA2493 PA2521 PA2528 PA3402 PA3405 PA3523
        PA3677 PA4142 PA4206 PA4374 PA4591 PA4599 PA5232
  Hin:  HI0894
  Pmu:  PM0997 PM1134 PM1983
  Xfa:  XF0244 XF0300 XF0301 XF0302 XF1216 XF2084 XF2093
        XF2384 XF2398
  Nme:  NMB0548 NMB1716 NMB1738
  NmA:  NMA0728 NMA1970 NMA1995 NMA1996
  Rso:  RSc0011 RSc0163 RSc1653 RSc3206 RSp0291 RSp0313 RSp0492
        RSp0529 RSp0670_1 RSp0819 RSp0927 RSp1041 RSp1112 RSp1183
        RSp1197 RSp1457 RSp1463 RSp1598
  Hpy:  HP0606 HP0970 HP1328 HP1488
  jHp:  jhp0553 jhp0904 jhp1248 jhp1381
  Cje:  Cj0367c Cj0606 Cj1032
  Atu:  AGc3332 AGc3722 AGc4337 AGc4505 AGc4619 AGc4904 AGl1282
        AGl177_2 AGl2071 AGl2074 AGl2881 AGl2992_2 AGl2998 AGl3090
        AGl3215 AGl3498 AGl433 AGl492 AGl906 AGpA134 AGpA244
        AGpA549
  Sme:  SMa0876 SMa1111 SMa1124 SMa1664 SMa1885 SMb20346 SMb20368
        SMb20390 SMb20945_2 SMb21073_2 SMb21207 SMb21245_2 SMb21315 SMb21465
        SMb21497 SMc01094 SMc01458 SMc01828 SMc02571 SMc02868 SMc03146
        SMc03972 SMc04208 SMc04350
  Bme:  BMEI0359 BMEI0653 BMEI0892 BMEI1630 BMEI1646 BMEII0380 BMEII0381
        BMEII0472 BMEII0803 BMEII0851_2 BMEII0914
  Mlo:  mll1026 mll1427 mll2582 mll2830 mll3833 mll5251_2 mll5519
        mll5520 mll5780 mll6731 mll7356 mlr0589 mlr1394 mlr2403
        mlr3284 mlr3647 mlr4594 mlr6769_2 mlr6772 mlr7297
  Ccr:  CC0683 CC0808 CC0930 CC1009 CC1203 CC1787 CC2092
        CC2389 CC2722 CC3119 CC3196
  Rpr:  RP314 RP341
  Rco:  RC0428 RC0462 RC0570 RC0571
  Tpa:  TP0965
  Bbu:  BB0141
_______

[K] COG0846 NAD-dependent protein deacetylases, SIR2 family
  Afu:  AF0112 AF1676
  Mka:  MK1075
  Pho:  PH0947
  Pab:  PAB0801
  Pya:  PAE2959 PAE3500
  Sso:  SSO2478
  Ape:  APE1782
  Sce:  YDL042c_2 YDR191w YOL068c_2 YOR025w YPL015c
  Spo:  SPAC1783.04c SPBC16D10.07c SPCC132.02
  Ecu:  ECU03g0460
  Aae:  aq_2170
  Tma:  TM0490
  Fnu:  FN1185
  Dra:  DR0016
  Cac:  CAC0284
  Cgl:  Cgl0079 Cgl0625
  Mtu:  Rv1151c
  MtC:  MT1185
  Mle:  ML1511
  Spy:  SPy1215
  Sau:  SA0315 SA1999
  Lin:  lin2882
  Bsu:  BS_yhdZ
  Bha:  BH0907
  Eco:  ycfY
  EcZ:  ZcobB
  Ecs:  ECs1498
  Ype:  YPO1630
  Sty:  STM1221
  Vch:  VC1509
  Pae:  PA1125 PA1197
  Pmu:  PM0993
  Rso:  RSc1230
  Hpy:  HP1259
  jHp:  jhp1180
  Cje:  Cj1050c
  Ccr:  CC3480
  Mpu:  MYPU_4420
_______

[L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
  Afu:  AF0972
  Tac:  Ta1376
  Sce:  YGL094c_2 YGR276c YLR107w YOL080c
  Spo:  SPAC1782.08c SPAC22G7.04_2 SPAC637.09 SPBC1604.09c
  Ecu:  ECU07g0380
  Aae:  aq_2108 aq_932
  Tma:  TM0496
  Dra:  DR0856
  Cac:  CAC0738
  Cgl:  Cgl0248 Cgl1214 Cgl1259 Cgl2064
  Mtu:  Rv2191_1 Rv3711c
  MtC:  MT2247_1 MT3814
  Lla:  L0284_1 L9094
  Spy:  SPy0649_1 SPy1864
  Spn:  SP0802_1 SP0993
  Sau:  SA1288_1 SA1710 SA1806
  Lin:  lin2013_1
  Bsu:  BS_dinG_1
  Bha:  BH1691_1 BH3741 BH3832
  Syn:  slr1959_1
  Eco:  dnaQ exoX rnt
  EcZ:  Z2894 ZdnaQ Zrnt
  Ecs:  ECs0211 ECs2361 ECs2554
  Ype:  YPO1082 YPO2382
  Sty:  PSLT049 STM0264 STM1434 STM1878
  Buc:  BU188 BU248
  Vch:  VC0299 VC1006 VC1290 VC2233
  Pae:  PA1816 PA3232 PA3528
  Hin:  HI0137 HI0324
  Pmu:  PM0106 PM0988
  Xfa:  XF2146 XF2157
  Nme:  NMB1451_1 NMB1514
  NmA:  NMA1665_1 NMA1714
  Rso:  RSc1872
  Hpy:  HP1387
  jHp:  jhp1438
  Cje:  Cj0452
  Atu:  AGc3764 AGc7 AGl3437
  Sme:  SMa0255 SMc02789
  Bme:  BMEI2056 BMEII0290 BMEII0650
  Mlo:  mlr4495
  Ccr:  CC0005 CC1523
  Rpr:  RP732
  Rco:  RC1112
  Ctr:  CT261 CT536
  Cpn:  CPn0410 CPn0655
  Tpa:  TP0643
_______

[U] COG0848 Biopolymer transport protein
  Aae:  aq_1839 aq_1987
  Fnu:  FN1311 FN1833
  Dra:  DR0457
  Syn:  sll0478 sll0479 sll1405 slr0678
  Nos:  all5046 alr0644
  Eco:  exbD tolR
  EcZ:  ZexbD ZtolR
  Ecs:  ECs0773 ECs3889
  Ype:  YPO0683 YPO1122
  Sty:  STM0746 STM3158
  Vch:  VC1545 VC1838 VCA0912
  Pae:  PA0199 PA0694 PA0970 PA2982
  Hin:  HI0252 HI0384
  Pmu:  PM0969 PM1187
  Xfa:  XF0011 XF0012 XF1080 XF1899
  Nme:  NMB1728
  NmA:  NMA1983
  Rso:  RSc0733 RSc1965 RSc2529
  Hpy:  HP1129 HP1340 HP1446
  jHp:  jhp1057 jhp1259 jhp1339
  Cje:  Cj0110 Cj0180 Cj1629
  Atu:  AGc265 AGl2238
  Sme:  SMc02084 SMc03957
  Bme:  BMEI0337 BMEI0364
  Mlo:  mll3890 mll4167
  Ccr:  CC0322 CC2335 CC3232
  Rpr:  RP310
  Rco:  RC0423
  Ctr:  CT597
  Cpn:  CPn0784
_______

[D] COG0849 Actin-like ATPase involved in cell division
  Mka:  MK0451
  Aae:  aq_523
  Tma:  TM0835 TM1277
  Fnu:  FN1452
  Dra:  DR0630
  Cac:  CAC1013 CAC1692
  Lla:  L0207
  Spy:  SPy1521
  Spn:  SP1667
  Sau:  SA1028
  Lin:  lin2139
  Bsu:  BS_ftsA
  Bha:  BH2559 BH3243
  Eco:  ftsA
  EcZ:  ZftsA
  Ecs:  ECs0098
  Ype:  YPO0559
  Sty:  STM0132
  Buc:  BU213
  Vch:  VC2398
  Pae:  PA4408
  Hin:  HI1142
  Pmu:  PM0146
  Xfa:  XF0801
  Nme:  NMB0426
  NmA:  NMA2058
  Rso:  RSc2840
  Hpy:  HP0978
  jHp:  jhp0912
  Cje:  Cj0695
  Atu:  AGc3785
  Sme:  SMc01873
  Bme:  BMEI0584
  Mlo:  mll1549
  Ccr:  CC2541
  Rpr:  RP251
  Rco:  RC0335
  Tpa:  TP0389
  Bbu:  BB0300
_______

[D] COG0850 Septum formation inhibitor
  Aae:  aq_878
  Tma:  TM1047
  Fnu:  FN0175
  Dra:  DR1753
  Cac:  CAC1248
  Lin:  lin1580
  Bsu:  BS_minC
  Bha:  BH3028
  Syn:  sll0288
  Nos:  alr3455
  Eco:  minC
  EcZ:  ZminC
  Ecs:  ECs1670
  Ype:  YPO2078
  Sty:  STM1814
  Buc:  BU327
  Vch:  VC1959
  Pae:  PA3243
  Pmu:  PM0443
  Xfa:  XF1322
  Nme:  NMB0170
  NmA:  NMA0101
  Rso:  RSc3364
  Hpy:  HP1053
  jHp:  jhp0372
  Atu:  AGl3131
  Sme:  SMb21524
  Bme:  BMEII0927
  Mlo:  mll1951
_______

[D] COG0851 Septum formation topological specificity factor
  Fnu:  FN0177
  Dra:  DR0751
  Syn:  ssl0546
  Nos:  asr3457
  Eco:  minE
  EcZ:  ZminE
  Ecs:  ECs1668
  Ype:  YPO2076
  Sty:  STM1816
  Buc:  BU325
  Vch:  VC1961
  Pae:  PA3245
  Xfa:  XF1320
  Nme:  NMB0172
  NmA:  NMA0099
  Rso:  RSc3366
  Hpy:  HP0332
  jHp:  jhp0315
  Atu:  AGl3134
  Sme:  SMb21522
  Bme:  BMEII0925
  Mlo:  msl1949
_______

[C] COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit
  Afu:  AF1829_2
  Hbs:  VNG0637G_1
  Mac:  MA1497
  Tac:  Ta0968
  Tvo:  TVN1114
  Pho:  PH1448
  Pab:  PAB0494
  Pya:  PAE2926
  Sso:  SSO0323
  Ape:  APE1426
  Aae:  aq_1314_1 aq_551_1
  Tma:  TM1215
  Dra:  DR1504
  Mtu:  Rv3147
  MtC:  MT3235
  Syn:  slr1281
  Nos:  all3840
  Eco:  nuoC_1
  EcZ:  ZnuoC_1
  Ecs:  ECs3170_1
  Ype:  YPO2553_1
  Sty:  STM2326_1
  Buc:  BU156_1
  Pae:  PA2639_1
  Xfa:  XF0307
  Nme:  NMB0243
  NmA:  NMA0017
  Rso:  RSc2060
  Hpy:  HP1262
  jHp:  jhp1183
  Cje:  Cj1577c
  Atu:  AGc2342
  Sme:  SMa1531 SMc01914
  Bme:  BMEI1156
  Mlo:  mll1369
  Ccr:  CC1954
  Rpr:  RP355
  Rco:  RC0483
_______

[H] COG0853 Aspartate 1-decarboxylase
  Aae:  aq_476
  Tma:  TM0939
  Dra:  DR0718
  Cac:  CAC2916
  Cgl:  Cgl0136
  Mtu:  Rv3601c
  MtC:  MT3706.1
  Mle:  ML0231
  Sau:  SA2390
  Lin:  lin2014
  Bsu:  BS_panD
  Bha:  BH1689
  Syn:  sll0892
  Nos:  all3569
  Eco:  panD
  EcZ:  ZpanD
  Ecs:  ECs0135
  Ype:  YPO3403
  Sty:  STM0180
  Pae:  PA4731
  Xfa:  XF0231
  Nme:  NMB1282
  NmA:  NMA1492
  Rso:  RSc2731
  Hpy:  HP0034
  jHp:  jhp0030
  Cje:  Cj0296c
  Atu:  AGl2336
  Mlo:  mll5826 mll9093
  Ccr:  CC2295
_______

[H] COG0854 Pyridoxal phosphate biosynthesis protein
  Aae:  aq_1423
  Syn:  slr1779
  Nos:  all0218
  Eco:  pdxJ
  EcZ:  ZpdxJ
  Ecs:  ECs3430
  Ype:  YPO2930
  Sty:  STM2578
  Vch:  VC2458
  Pae:  PA0773
  Xfa:  XF0060
  Nme:  NMB0448
  NmA:  NMA2037
  Rso:  RSc1066
  Hpy:  HP1582
  jHp:  jhp1489
  Cje:  Cj1238
  Atu:  AGc3668
  Sme:  SMc01407
  Bme:  BMEI0621
  Mlo:  mll1418
  Ccr:  CC1557
_______

[P] COG0855 Polyphosphate kinase
  Mac:  MA0081
  Dra:  DR1939
  Cac:  CAC0622
  Mtu:  Rv2984
  MtC:  MT3062
  Mle:  ML1681
  Bha:  BH1392
  Syn:  sll0290
  Nos:  alr3593
  Eco:  ppk
  EcZ:  Zppk
  Ecs:  ECs3363
  Ype:  YPO2836
  Sty:  STM2501
  Vch:  VC0723
  Pae:  PA5242
  Xfa:  XF2591
  Nme:  NMB1900
  NmA:  NMA0555
  Rso:  RSc1536
  Hpy:  HP1010
  jHp:  jhp0413
  Cje:  Cj1359
  Atu:  AGc2115
  Sme:  SMc00618
  Bme:  BMEI1205
  Mlo:  mlr8161
  Ccr:  CC1710
_______

[F] COG0856 Orotate phosphoribosyltransferase homologs
  Afu:  AF0386
  Hbs:  VNG0448G
  Mac:  MA0919 MA2520
  Mth:  MTH876
  Mja:  MJ1646
  Tac:  Ta1164
  Tvo:  TVN1218
_______

[R] COG0857 BioD-like N-terminal domain of phosphotransacetylase
  Afu:  AF1212
  Hbs:  VNG0941C
  Dra:  DR0073_1
  Mtu:  Rv0408_1
  MtC:  MT0421_1
  Syn:  slr0039 slr2132_1
  Nos:  all4665
  Eco:  pta_1
  EcZ:  Zpta_1
  Ecs:  ECs3181_1
  Ype:  YPO2567_1
  Sty:  STM2338_1
  Buc:  BU176_1
  Vch:  VC1097_1
  Pae:  PA0835_1
  Hin:  HI1203_1
  Pmu:  PM0705_1
  Nme:  NMB0631_1
  NmA:  NMA0841_1
  Hpy:  HP0905
  jHp:  jhp0841_1
  Cje:  Cj0688_1
_______

[J] COG0858 Ribosome-binding factor A
  Aae:  aq_106a
  Tma:  TM0855
  Fnu:  FN2019
  Dra:  DR0901
  Cac:  CAC1803
  Cgl:  Cgl1938
  Mtu:  Rv2838c
  MtC:  MT2904
  Mle:  ML1555
  Lla:  L0375
  Spy:  SPy1719
  Spn:  SP0557
  Sau:  SA1113
  Lin:  lin1364
  Bsu:  BS_rbfA
  Bha:  BH2411
  Syn:  sll0754
  Nos:  alr0063
  Eco:  rbfA
  EcZ:  ZrbfA
  Ecs:  ECs4048
  Ype:  YPO3495
  Sty:  STM3285
  Buc:  BU376
  Vch:  VC0644
  Pae:  PA4743
  Hin:  HI1288
  Pmu:  PM0757
  Xfa:  XF0236
  Nme:  NMB1373
  NmA:  NMA1586
  Rso:  RSc1290
  Hpy:  HP1047
  jHp:  jhp0378
  Cje:  Cj0137
  Atu:  AGc129
  Sme:  SMc00320
  Bme:  BMEI1964
  Mlo:  mlr5557
  Ccr:  CC0037
  Rpr:  RP435
  Rco:  RC0606
  Ctr:  CT095
  Cpn:  CPn0318
  Tpa:  TP0890
  Bbu:  BB0802
  Uur:  UU321
  Mpu:  MYPU_6720
  Mpn:  MPN156
  Mge:  MG143
_______

[M] COG0859 ADP-heptose:LPS heptosyltransferase
  Aae:  aq_145 aq_1543 aq_362
  Fnu:  FN0543 FN0544 FN0546 FN0992 FN1247
  Syn:  slr0606
  Nos:  alr5168
  Eco:  b1979 b1980 rfaC rfaF rfaK rfaQ
  EcZ:  Z3137 ZrfaC ZrfaF ZwaaQ
  Ecs:  ECs2777 ECs4498 ECs4499 ECs4507
  Ype:  YPO0056 YPO0057 YPO0186 YPO0416
  Sty:  STM3711 STM3712 STM3723
  Vch:  VC0223 VC0225 VC0235 VC0236
  Pae:  PA5011 PA5012
  Hin:  HI0261 HI0523 HI1105
  Pmu:  PM1144 PM1294 PM1302 PM1843 PM1844
  Xfa:  XF2154
  Nme:  NMB1527 NMB2156
  NmA:  NMA0243 NMA1727
  Rso:  RSc0565 RSc0692 RSp0634
  Hpy:  HP0279 HP0479 HP1191 HP1283 HP1284
  jHp:  jhp0264 jhp0431 jhp1116 jhp1204
  Cje:  Cj1133 Cj1148
  Mlo:  mlr2566 mlr2567
  Ccr:  CC0386 CC1051 CC1854 CC3307
_______

[M] COG0860 N-acetylmuramoyl-L-alanine amidase
  Aae:  aq_1681
  Fnu:  FN1334
  Dra:  DR1387 DR1469 DR1632 DR2394 DR2567 DRC0013
  Cac:  CAC3092
  Cgl:  Cgl3032_2
  Mtu:  Rv3717 Rv3915_2
  MtC:  MT3820 MT4034_2
  Mle:  ML2331 ML2704_2
  Sau:  SA1458
  Lin:  lin0176 lin1296_1 lin1556_2
  Bsu:  BS_cwlC BS_cwlD BS_lytC_2 BS_yqiI BS_yrvJ_2
  Bha:  BH0239 BH0810 BH0966_1 BH1294 BH1295_2 BH3510_1 BH3665_2
  Syn:  slr0891 slr1744 slr1910
  Nos:  all1140_1 all4070 all4822_1 all4998 all4999 alr0092 alr0093
        alr1324_1
  Eco:  amiA amiB amiC
  EcZ:  Z4134 ZamiA ZamiB
  Ecs:  ECs3306 ECs3674 ECs5145
  Ype:  YPO0370_1 YPO1023
  Sty:  STM2450 STM2991 STM4358
  Buc:  BU576
  Vch:  VC0344_1
  Pae:  PA4947_1 PA5538
  Hin:  HI0066_1
  Pmu:  PM0903_1
  Xfa:  XF0759
  Nme:  NMB0456 NMB0987 NMB1085
  NmA:  NMA1188 NMA1303 NMA1864 NMA2028
  Rso:  RSc2539
  Hpy:  HP0772
  jHp:  jhp0709
  Cje:  Cj1269c_2
  Atu:  AGc2473
  Sme:  SMc01335
  Bme:  BMEI1056
  Mlo:  mlr0213
  Ccr:  CC1876
  Ctr:  CT268
  Cpn:  CPn0417
  Tpa:  TP0247
  Bbu:  BB0625_2 BB0666
_______

[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance
  Dra:  DR1187 DRB0131
  Cac:  CAC1039 CAC1415
  Cgl:  Cgl1921
  Mtu:  Rv2723
  MtC:  MT2795
  Sau:  SA0878
  Lin:  lin0990 lin0991
  Bsu:  BS_yceF BS_yjbE BS_ykoY
  Bha:  BH2553 BH2860
  Syn:  sll1022
  Nos:  all3403
  Eco:  yegH_1 ygdQ ygjT yoaE_1
  EcZ:  Z4150 ZterC ZterC.2 ZyegH_1 ZygjT ZyoaE_1
  Ecs:  ECs1354 ECs2525_1 ECs2868_1 ECs3689 ECs3970
  Ype:  YPO0297 YPO1527_1 YPO1759_1
  Sty:  STM1828_1 STM2119_1 STM3006 STM3224
  Buc:  BU323_1
  Vch:  VCA0546
  Pae:  PA1170 PA1331_1 PA2549 PA5250 PA5469
  Hin:  HI0056
  Pmu:  PM1066
  Xfa:  XF0406
  Nme:  NMB0012 NMB1485_1
  NmA:  NMA0259 NMA1694_1
  Rso:  RSc0556 RSc0949 RSp1172_1
  Hpy:  HP1343
  jHp:  jhp1262
  Cje:  Cj0186c
  Atu:  AGc3415 AGc3584 AGl1024_1 AGl786
  Sme:  SMc03171 SMc04175
  Bme:  BMEI0317 BMEI0671_1
  Mlo:  mll3952 mlr0496
  Ccr:  CC0347 CC1237 CC3682
  Rpr:  RP786
  Rco:  RC1219
_______

[L] COG0863 DNA modification methylase
  Hbs:  VNG1543G
  Mja:  MJ0985 MJ1209m_1 MJ1448 MJ1498
  Tac:  Ta0318m Ta0829 Ta1168
  Tvo:  TVN0442 TVN1400 TVN1413 TVN1416_1
  Pho:  PH0584
  Tma:  TM0328
  Fnu:  FN2074
  Dra:  DRC0020
  Spy:  SPy0679_2
  Lin:  lin1262_2 lin1737_2
  Bha:  BH3535_2
  Nos:  all1290 all2661 all3632 all4411 alr5348_2
  Eco:  yhdJ
  EcZ:  Z2060 ZyhdJ
  Ecs:  ECs1780 ECs4134
  Ype:  YPMT1.64c YPO0391_1
  Sty:  PSLT059 STM3386
  Vch:  VCA0447
  Hin:  HI1392
  Xfa:  XF0641 XF1235 XF2297 XF2313
  Nme:  NMB0727
  Rso:  RSc0844_2 RSc0845_2 RSc1911 RSc1982 RSp0570_2
  Hpy:  HP0050 HP0092 HP0263 HP1352 HP1367 HP1368
  jHp:  jhp0043 jhp0085 jhp0248 jhp0629 jhp0756 jhp1271
  Atu:  AGc1453
  Sme:  SMc00021
  Bme:  BMEI1444
  Mlo:  mlr7520
  Ccr:  CC0378
_______

[K] COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
  Afu:  AF0743
  Hbs:  VNG0147C
  Mac:  MA1395 MA1763 MA2814 MA4075
  Mth:  MTH603 MTH739
  Mja:  MJ0080 MJ0549 MJ0767
  Mka:  MK1502
  Pho:  PH0601
  Pab:  PAB0960
  Pya:  PAE2022
  Sso:  SSO0659
  Ape:  APE0535 APE2570
  Cac:  CAC0493
  Lin:  lin0886
  Bsu:  BS_ydcD
  Bha:  BH0521
  Eco:  nikR
  EcZ:  ZyhhG
  Ecs:  ECs4348
  Sty:  STM3584
  Hpy:  HP1338
  jHp:  jhp1257
  Bme:  BMEII0486
  Ccr:  CC1826
_______

[F] COG1001 Adenine deaminase
  Afu:  AF0240
  Mac:  MA2310
  Mth:  MTH866
  Mja:  MJ1459
  Mka:  MK0829
  Dra:  DRA0270
  Cac:  CAC0887
  Lin:  lin1853
  Bsu:  BS_adeC BS_yerA
  Bha:  BH0637 BH0640
  Eco:  yicP
  EcZ:  ZyicP
  Ecs:  ECs4602
  Atu:  AGc4165 AGl883
  Sme:  SMa1715 SMa1718 SMb21278 SMc01533
  Bme:  BMEII0627
  Mlo:  mlr0157
  Bbu:  BBH33 BBK17
_______

[V] COG1002 Type II restriction enzyme, methylase subunits
  Hbs:  VNG6135C VNG6136H VNG7096 VNG7097
  Mac:  MA2372
  Mja:  MJ1328 MJECS02
  Tac:  Ta1336 Ta1337
  Tvo:  TVN0681 TVN0725
  Pya:  PAE0242
  Dra:  DR2267 DRA0119 DRA0119.1 DRB0137 DRB0138
  Cac:  CAC2309 CAC3535
  Cgl:  Cgl0716
  Bsu:  BS_yeeA
  EcZ:  Z5900
  Ecs:  ECs5262
  Sty:  STM4495
  Hin:  HI0513_2
  NmA:  NMA1791
  Hpy:  HP1517 HP1518
  jHp:  jhp1409
  Cje:  Cj0031 Cj0032 Cj0690c
  Ccr:  CC0826
  Bbu:  BBE02 BBH09 BBK02 BBK03 BBK04
  Uur:  UU036
_______

[E] COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain
  Hbs:  VNG1601G
  Tac:  Ta1357
  Tvo:  TVN0298
  Pho:  PH1994
  Pab:  PAB1172
  Sso:  SSO0917
  Ape:  APE2121
  Sce:  YMR189w_2
  Spo:  SPAC13G6.06c_2
  Aae:  aq_1903
  Tma:  TM0214
  Dra:  DR1809_2
  Mtu:  Rv1832_2
  MtC:  MT1880_2
  Mle:  ML2072_2
  Sau:  SA1365
  Lin:  lin1387
  Bsu:  BS_yqhK
  Bha:  BH2814
  Syn:  slr0293_2
  Nos:  all4607_2
  Eco:  gcvP_2
  EcZ:  ZgcvP_2
  Ecs:  ECs3774_2
  Ype:  YPO0905_2
  Sty:  STM3053_2
  Pae:  PA2445_2 PA5213_2
  Xfa:  XF1385_2
  NmA:  NMA1934_2
  Rso:  RSc3295_2
  Atu:  AGc2699_2
  Sme:  SMc02049_2
  Bme:  BMEII0561_2
  Mlo:  mlr0885_2
  Ccr:  CC3352
_______

[M] COG1004 Predicted UDP-glucose 6-dehydrogenase
  Afu:  AF0302 AF0596
  Hbs:  VNG0046G VNG1048G
  Mac:  MA4457
  Mja:  MJ1054_1 MJ1054_3
  Pab:  PAB0770
  Sso:  SSO0810
  Aae:  aq_024
  Cgl:  Cgl0358 Cgl2788
  Mtu:  Rv0322
  MtC:  MT0337
  Spy:  SPy0542 SPy2201
  Bsu:  BS_tuaD BS_ytcA BS_ywqF
  Bha:  BH3708
  Syn:  slr1299
  Nos:  alr0658
  Eco:  ugd
  EcZ:  Zugd
  Ecs:  ECs2829
  Ype:  YPO2174
  Sty:  STM2080
  Vch:  VCA0780
  Pae:  PA2022 PA3540 PA3559
  Pmu:  PM0776
  Xfa:  XF1606
  Rso:  RSc0913
  Cje:  Cj1441c
  Atu:  AGl1413
  Sme:  SMc02641
  Bme:  BMEII0727
  Mlo:  mlr5265 mlr9719
  Ccr:  CC2379 CC2382
  Rpr:  RP779
  Rco:  RC1212
_______

[C] COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H)
  Afu:  AF1831
  Hbs:  VNG0639G
  Mac:  MA1499
  Tac:  Ta0966
  Tvo:  TVN1112
  Pya:  PAE1581
  Sso:  SSO0325
  Ape:  APE1421
  Aae:  aq_1315 aq_1373 aq_1374
  Dra:  DR1498
  Mtu:  Rv3152
  MtC:  MT3240
  Syn:  sll0519
  Nos:  alr0223
  Eco:  nuoH
  EcZ:  ZnuoH
  Ecs:  ECs3166
  Ype:  YPO2549
  Sty:  STM2322
  Buc:  BU160
  Pae:  PA2643
  Xfa:  XF0312
  Nme:  NMB0250
  NmA:  NMA0009
  Rso:  RSc2055
  Hpy:  HP1267
  jHp:  jhp1188
  Cje:  Cj1572c
  Atu:  AGc2354
  Sme:  SMa1516 SMc01921
  Bme:  BMEI1151
  Mlo:  mll1361
  Ccr:  CC1945
  Rpr:  RP796
  Rco:  RC1230
_______

[P] COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit
  Hbs:  VNG0565C
  Mac:  MA4570
  Mth:  MTH1247
  Mja:  MJ1310
  Pho:  PH0941a PH1430 PH1453
  Pab:  PAB0488 PAB1400 PAB1887 PAB7306
  Tma:  TM1104 TM1210
  Dra:  DR0882
  Cgl:  Cgl0269 Cgl2673
  Sau:  SA0580 SA0811
  Lin:  lin2479
  Bsu:  BS_yufV
  Bha:  BH1317
  Syn:  slr2006 slr2008
  Nos:  all1843
  Vch:  VCA0156
  Pae:  PA1055
  Atu:  AGc1661 AGc902
  Sme:  SMc00053 SMc03180
  Bme:  BMEII0769
  Rpr:  RP285
  Rco:  RC0383
_______

[C] COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N)
  Afu:  AF1827
  Hbs:  VNG0648G
  Mac:  MA1506
  Tac:  Ta0959
  Tvo:  TVN1104
  Pya:  PAE1567
  Sso:  SSO0329
  Ape:  APE1410
  Aae:  aq_1322 aq_1383
  Dra:  DR1492
  Mtu:  Rv3158
  MtC:  MT3246
  Syn:  sll0223
  Nos:  all4883
  Eco:  nuoN
  EcZ:  ZnuoN
  Ecs:  ECs3160
  Ype:  YPO2543
  Sty:  STM2316
  Buc:  BU166
  Pae:  PA2649
  Xfa:  XF0318
  Nme:  NMB0259
  NmA:  NMA2228
  Rso:  RSc2049
  Hpy:  HP1273
  jHp:  jhp1194
  Cje:  Cj1566c
  Atu:  AGc2364
  Sme:  SMa1535 SMc01927
  Bme:  BMEI1145
  Mlo:  mll1352
  Ccr:  CC1937
  Rpr:  RP537
  Rco:  RC0796
_______

[C] COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M)
  Hbs:  VNG0647G
  Mac:  MA1505
  Tac:  Ta0960
  Tvo:  TVN1105
  Aae:  aq_1321 aq_1382
  Dra:  DR1493
  Mtu:  Rv3157
  MtC:  MT3245
  Syn:  sll0027 sll1733 slr0331 slr1291
  Nos:  alr0348 alr0870 alr3957 alr4157 alr5050
  Eco:  nuoM
  EcZ:  ZnuoM
  Ecs:  ECs3161
  Ype:  YPO2544
  Sty:  STM2317
  Buc:  BU165
  Pae:  PA2648
  Xfa:  XF0317
  Nme:  NMB0258
  NmA:  NMA2229
  Rso:  RSc2050
  Hpy:  HP1272
  jHp:  jhp1193
  Cje:  Cj1567c
  Atu:  AGc2362
  Sme:  SMa1536 SMc01926
  Bme:  BMEI1146
  Mlo:  mll1354
  Ccr:  CC1938
  Rpr:  RP793
  Rco:  RC1227
_______

[CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
  Afu:  AF1826
  Hbs:  VNG0646G
  Mac:  MA1504 MA4572_1
  Tac:  Ta0961
  Tvo:  TVN1106 TVN1107
  Pab:  PAB1391
  Pya:  PAE1568
  Sso:  SSO0328_2
  Ape:  APE1411
  Aae:  aq_1320 aq_1379 aq_866
  Dra:  DR0880_1 DR1494
  Cgl:  Cgl0270_1 Cgl2672_1
  Mtu:  Rv3156
  MtC:  MT3244
  Sau:  SA0411 SA0578_1 SA0813_1
  Lin:  lin2477_1
  Bsu:  BS_ndhF BS_shaA_1
  Bha:  BH1319_1
  Syn:  sll0026 sll1732 slr0844
  Nos:  alr0869 alr3956 alr4156
  Eco:  hyfD nuoL
  EcZ:  ZhyfD ZnuoL
  Ecs:  ECs3162 ECs3346
  Ype:  YPO2545
  Sty:  STM2318
  Buc:  BU164
  Vch:  VC1581 VCA0157_1
  Pae:  PA1054_1 PA2647
  Xfa:  XF0316
  Nme:  NMB0257
  NmA:  NMA0002
  Rso:  RSc2051
  Hpy:  HP1271
  jHp:  jhp1192
  Cje:  Cj1568c
  Atu:  AGc1658_1 AGc2360 AGc903_1
  Sme:  SMc00051_1 SMc01925 SMc03179_1
  Bme:  BMEI1147 BMEII0770_1
  Mlo:  mll1355
  Ccr:  CC1939
  Rpr:  RP792
  Rco:  RC1226
_______

[H] COG1010 Precorrin-3B methylase
  Afu:  AF0724_1
  Hbs:  VNG1555G VNG1557G
  Mac:  MA4259
  Mth:  MTH1403_1
  Mja:  MJ0813
  Mka:  MK1376
  Tac:  Ta0655
  Tvo:  TVN0921
  Pya:  PAE0344
  Sso:  SSO2306
  Fnu:  FN0951
  Cac:  CAC1382
  Mtu:  Rv2066_2
  MtC:  MT2126_2
  Lin:  lin1162
  Syn:  slr0969_2
  Nos:  all0453_2
  Sty:  STM2027
  Pae:  PA2903_2
  Rso:  RSp0618_1
  Atu:  AGc5079
  Sme:  SMc03190
  Bme:  BMEI0712_2
  Mlo:  mlr1381
_______

[R] COG1011 Predicted hydrolase (HAD superfamily)
  Hbs:  VNG1202C VNG1577C VNG1675a
  Mac:  MA1252 MA1363 MA1918 MA3043 MA3051
  Mth:  MTH209
  Mja:  MJ1437
  Mka:  MK0970
  Pho:  PH0253 PH0459 PH0935 PH1655 PH1936 PH1996
  Pab:  PAB1170 PAB1224 PAB1316 PAB1576 PAB2019 PAB2197
  Pya:  PAE1785 PAE2293 PAE2947
  Sso:  SSO0726 SSO1159 SSO1896 SSO2028 SSO2159
  Sce:  YER037w YGL224c YHR100c YMR130w
  Spo:  SPAC24B11.05 SPAC7D4.05 SPCC645.02
  Ecu:  ECU05g1170
  Tma:  TM0640 TM1177 TM1700
  Dra:  DR0293 DR0414 DR0827 DR1344 DR1705
  Cac:  CAC0468 CAC1776 CAC3581
  Cgl:  Cgl0120 Cgl0737 Cgl1427 Cgl2850
  Mtu:  Rv3376
  MtC:  MT3486
  Lla:  L111950 L157841 L96903
  Spy:  SPy0596 SPy1066
  Spn:  SP1171
  Sau:  SA0568 SA1018
  Lin:  lin0287 lin0639
  Bsu:  BS_yfnB BS_ysaA
  Bha:  BH0473 BH2155 BH2972
  Nos:  alr4095
  Eco:  yigB yihX yjjG yrfG
  EcZ:  ZyigB ZyihX ZyjjG ZyrfG
  Ecs:  ECs4241 ECs4742 ECs4808 ECs5332
  Ype:  YPO0027 YPO0141 YPO2295 YPO3842
  Sty:  STM3496 STM3950 STM4026 STM4559
  Vch:  VC0129 VC1645 VCA0608
  Pae:  PA0810 PA5177 PA5281
  Pmu:  PM1545 PM1700 PM1881
  Nme:  NMB0040
  NmA:  NMA0286
  Rso:  RSc0032 RSc1362
  Atu:  AGc1458 AGc662 AGl2827 AGl2834
  Sme:  SMa1851 SMa1857 SMa1978 SMc00081 SMc00103 SMc01730 SMc01745
  Bme:  BMEI1368 BMEI1443 BMEII0129 BMEII0272
  Mlo:  mll4579 mll7035 mll7522 mll7634 mlr4841 mlr6523 mlr7041
  Ccr:  CC0244 CC0282 CC2817 CC3320
  Tpa:  TP0158 TP0407
  Bbu:  BB0511
_______

[C] COG1012 NAD-dependent aldehyde dehydrogenases
  Hbs:  VNG0771G VNG0808G VNG0937G VNG2513G
  Mac:  MA0705 MA1355 MA2860 MA4079
  Mth:  MTH978
  Mja:  MJ1411
  Mka:  MK1108
  Tac:  Ta0220 Ta0439 Ta0603 Ta0809
  Tvo:  TVN0397 TVN0653 TVN1021 TVN1054 TVN1283 TVN1374
  Pya:  PAE2480
  Sso:  SSO1218 SSO1629 SSO1842 SSO3117 SSO3194
  Ape:  APE0163 APE0807 APE1786
  Sce:  YBR006w YER073w YHR037w YHR039c YMR110c YMR169c YMR170c
        YOR374w YPL061w
  Spo:  SPAC1002.12c SPAC139.05 SPAC922.07c SPAC9E9.09c SPBC21C3.15c SPBC24C6.04 SPCC550.10
  Aae:  aq_186
  Fnu:  FN0084 FN0454
  Dra:  DR0813 DR2381_1 DRA0003 DRA0030 DRA0126 DRA0220 DRA0343
        DRA0348
  Cac:  CAC3657 CAP0035_1 CAP0162_1
  Cgl:  Cgl0050 Cgl0099_2 Cgl0160 Cgl0447 Cgl0473 Cgl0530 Cgl0532
        Cgl2416 Cgl2615 Cgl2656 Cgl2736
  Mtu:  Rv0147 Rv0223c Rv0234c Rv0458 Rv0753c Rv0768 Rv1187
        Rv1731 Rv2858c Rv3293
  MtC:  MT0155 MT0233 MT0245 MT0474 MT0777 MT0792 MT1224
        MT1772 MT2926 MT3392
  Mle:  ML2573 ML2639
  Lla:  L13145_1
  Spy:  SPy1067 SPy1371
  Spn:  SP1119 SP2026_1
  Sau:  SA0143_1 SA0162 SA1736 SA1924 SA2341 SA2406
  Lin:  lin0401 lin0913 lin1129 lin1143 lin1675_1
  Bsu:  BS_aldX BS_aldY BS_dhaS BS_gbsA BS_iolA BS_rocA BS_ycbD
        BS_ycgN BS_ycnH BS_yfmT BS_ywdH
  Bha:  BH0203 BH0539 BH0681 BH0865 BH0995 BH1005 BH1738
        BH2010 BH2237 BH2312 BH2737 BH3316 BH3940
  Syn:  sll1561_2 slr0091 slr0370
  Nos:  all3556 all5022 alr0540_2 alr3672 alr3771
  Eco:  adhE_1 aldA aldB aldH astD betB eutE
        feaB gabD maoC_1 ydcW yneI
  EcZ:  Z2275 Z2778 ZadhE_1 ZaldA ZaldB ZaldH ZbetB
        ZeutE ZgabD ZyneI
  Ecs:  ECs0358 ECs1741_1 ECs1877 ECs2021 ECs2048 ECs2132 ECs2452
        ECs3317 ECs3522 ECs4464
  Ype:  YPO1166 YPO1290 YPO1763 YPO1964 YPO2180_1 YPO2577
  Sty:  STM1102 STM1305 STM1524 STM1597 STM1749_1 STM2051 STM2463
        STM2791 STM3129 STM3680 STM4421 STM4519
  Vch:  VC0819 VC1745 VC1819 VC2033_1 VC2616 VCA1067
  Pae:  PA0130 PA0219 PA0265 PA0366 PA0747 PA0898 PA1027
        PA1253 PA1984 PA2125 PA2217 PA2323 PA3504 PA3570
        PA4022 PA4073 PA4123 PA4189 PA4899 PA5312 PA5373
  Pmu:  PM1453_1 PM1530 PM1536
  Nme:  NMB1353 NMB1488 NMB1968
  NmA:  NMA0480 NMA1565 NMA1696
  Rso:  RSc0028 RSc0161 RSc1456 RSc2110 RSc2350 RSc2536 RSc3128
        RSp0226 RSp0229 RSp0650 RSp0827 RSp0890 RSp1055 RSp1591
        RSp1611
  Hpy:  HP0056_2
  jHp:  jhp0048_2
  Cje:  Cj0489 Cj0490 Cj1503c_2
  Atu:  AGc1515 AGc351 AGc3880 AGc4041 AGl1010GM AGl1228 AGl1241
        AGl1402 AGl1790 AGl1806 AGl241 AGl2660 AGl2838 AGl2842
        AGl3116 AGl75 AGpA197 AGpA283 AGpA320
  Sme:  SMa0050 SMa0052 SMa0220 SMa0260 SMa0796 SMa0805 SMa1415
        SMa1731 SMa1844 SMa1848 SMa2213 SMb20262 SMb20378 SMb20424
        SMb20891 SMb21185 SMb21301 SMb21539 SMb21635_1 SMc00094 SMc00781
        SMc01588 SMc01656 SMc01971 SMc02689 SMc02780 SMc04385 SMc04397
  Bme:  BMEI0024 BMEI0219 BMEI0386 BMEI1382 BMEI1559 BMEI1560 BMEI1740
        BMEI1747 BMEII0124 BMEII0125 BMEII0135 BMEII0140 BMEII0141 BMEII0142
        BMEII0225 BMEII0241 BMEII0242 BMEII0282 BMEII0388 BMEII0608 BMEII0869
  Mlo:  mll1015 mll1168 mll2219 mll2319 mll2867 mll3072 mll3987
        mll4783 mll5719 mll5809 mll6142 mll6153 mll6639 mll7043
        mll7045 mll7128 mll7197 mll7608 mlr3049 mlr4051 mlr4198
        mlr5236 mlr5385 mlr6098 mlr6969 msl6152 msl8688
  Ccr:  CC0419 CC0582 CC0822 CC1216 CC1302 CC1607 CC1849
        CC2274 CC2397 CC2402 CC2791 CC3140 CC3141 CC3580
  Rco:  RC0621
  Uur:  UU362
_______

[C] COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
  Afu:  AF0468 AF0750 AF1702 AF2052
  Hbs:  VNG0473G VNG1125G
  Mac:  MA0031 MA2407 MA2909_1 MA3076
  Mth:  MTH1034 MTH1738 MTH537 MTH705_1
  Mja:  MJ0266 MJ0537
  Mka:  MK0083 MK0729
  Tac:  Ta0260 Ta0629 Ta0772m
  Tvo:  TVN0836 TVN0847 TVN1334
  Pho:  PH0681 PH0685 PH1661 PH1665
  Pab:  PAB0344 PAB0347 PAB1473 PAB1476
  Pya:  PAE0938 PAE1043 PAE1558 PAE2737 PAE3274
  Sso:  SSO1206 SSO2130 SSO2756 SSO2816
  Ape:  APE1472 APE2128
  Sce:  YJR137c_2
  Spo:  SPAC10F6.01c_2
  Aae:  aq_1168 aq_1196
  Tma:  TM0018 TM0405 TM1165
  Fnu:  FN1170_3 FN1421_3 FN1750 FN1751
  Cac:  CAC2229_3 CAC2458 CAC2499_3
  Mtu:  Rv2454c
  MtC:  MT2529
  Lla:  L29321_3
  Sau:  SA1132
  Lin:  lin0824_3
  Bha:  BH2373
  Syn:  sll0741_3
  Nos:  alr1911_3 alr2803_3
  Eco:  ydbK_3
  EcZ:  ZydbK_3
  Ecs:  ECs2000_3
  Ype:  YPO2334_3
  Sty:  STM1651_3
  Vch:  VCA0530_3
  Hpy:  HP0590 HP1111
  jHp:  jhp0538 jhp1038
  Cje:  Cj0537 Cj1476c_3
  Tpa:  TP0939_3
_______

[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
  Afu:  AF0471 AF0749_1 AF1699 AF2030 AF2055
  Hbs:  VNG0474G_1 VNG1128G_1
  Mac:  MA0034 MA1023 MA1726 MA2909_2 MA3075_1
  Mth:  MTH1035 MTH1740_1 MTH1853 MTH536_1 MTH705_2
  Mja:  MJ0269 MJ0536
  Mka:  MK0080 MK0730
  Tac:  Ta0259m_1 Ta0626m Ta0773_1 Ta1013
  Tvo:  TVN0576 TVN0833 TVN0846_1 TVN1335_1
  Pho:  PH0229 PH0678 PH0764 PH1660 PH1663
  Pab:  PAB0143 PAB0345 PAB0348 PAB0857 PAB1470
  Pya:  PAE0939_1 PAE1040 PAE1559_1 PAE2736_1 PAE3279 PAE3475
  Sso:  SSO1208 SSO2069 SSO2758 SSO2815_1
  Ape:  APE1473_1 APE2126_1
  Aae:  aq_1169 aq_1200
  Tma:  TM0015 TM0406 TM1164_1
  Fnu:  FN1170_2 FN1421_2
  Cac:  CAC2000 CAC2229_2 CAC2459_1 CAC2499_2
  Mtu:  Rv2455c_1
  MtC:  MT2530_1
  Lla:  L29321_2
  Sau:  SA1131_1
  Lin:  lin0824_2
  Bha:  BH2374_1
  Syn:  sll0741_2
  Nos:  alr1911_2 alr2803_2
  Eco:  ydbK_2
  EcZ:  ZydbK_2
  Ecs:  ECs2000_2
  Ype:  YPO2334_2
  Sty:  STM1651_2
  Vch:  VCA0530_2
  Rso:  RSc1828 RSc3122_2
  Hpy:  HP0591 HP1108
  jHp:  jhp0539 jhp1035
  Cje:  Cj0538 Cj1476c_2
  Mlo:  mlr5175_2 mlr5450
  Ccr:  CC3176_2
  Tpa:  TP0939_2
_______

[G] COG1015 Phosphopentomutase
  Tma:  TM0167
  Dra:  DR2135
  Cac:  CAC2065
  Lla:  L154925
  Spy:  SPy0890
  Spn:  SP0829
  Sau:  SA0134
  Lin:  lin2068
  Bsu:  BS_drm
  Bha:  BH0592 BH1530
  Eco:  deoB yhfW
  EcZ:  ZdeoB
  Ecs:  ECs5342
  Ype:  YPO0439
  Sty:  STM4569
  Buc:  BU542
  Vch:  VC2348
  Hpy:  HP1179
  jHp:  jhp1105
  Atu:  AGc219
  Sme:  SMc04119
  Mlo:  mll5587
  Mpu:  MYPU_2770
_______

[C] COG1017 Hemoglobin-like flavoprotein
  Sce:  YGR234w_1
  Spo:  SPAC869.02c_1
  Aae:  aq_211
  Dra:  DRA0243_1
  Cgl:  Cgl2778_1
  Sau:  SA0231_1
  Bsu:  BS_hmp_1
  Bha:  BH1058_1
  Eco:  hmp_1
  EcZ:  ZhmpA_1
  Ecs:  ECs3418_1
  Ype:  YPO2908_1
  Sty:  STM2556_1
  Vch:  VCA0183_1
  Pae:  PA2664_1
  Xfa:  XF0053_1
  Rso:  RSc3398_1
  Cje:  Cj1586
  Sme:  SMa1191_1
_______

[C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
  Hbs:  VNG0475C
  Sce:  YGR234w_2
  Spo:  SPAC869.02c_2
  Fnu:  FN0100
  Dra:  DRA0243_2
  Cgl:  Cgl2333 Cgl2778_2
  Mtu:  Rv2776c Rv3230c Rv3554_2 Rv3571
  MtC:  MT2846 MT3327 MT3658_2 MT3676
  Sau:  SA0231_2
  Bsu:  BS_hmp_2
  Bha:  BH1058_2
  Eco:  fpr hmp_2 paaE ybjV yeaX
  EcZ:  Z1106 Zfpr ZhmpA_2 ZyeaX
  Ecs:  ECs0958 ECs2512 ECs3418_2 ECs4849
  Ype:  YPO0088 YPO1359 YPO2492 YPO2908_2
  Sty:  STM0936 STM2556_2 STM4084
  Buc:  BU581
  Vch:  VCA0183_2 VCA0924_2
  Pae:  PA2664_2 PA3397 PA3498 PA4615 PA4889 PA4905 PA5411
  Xfa:  XF0053_2 XF1889
  Nme:  NMB1044 NMB1450
  NmA:  NMA1442 NMA1664
  Rso:  RSc1305 RSc3398_2 RSp0063 RSp0223 RSp0608
  Atu:  AGc1321 AGc2692
  Sme:  SMa0752 SMa1191_2 SMa1500_2 SMa1735 SMa2117_2 SMb21636 SMc00981
        SMc02122 SMc04151
  Bme:  BMEI0548 BMEI1591
  Mlo:  mll4785 mll5100 mll6619_2 mlr7322
  Ccr:  CC2394 CC3208
_______

[R] COG1019 Predicted nucleotidyltransferase
  Afu:  AF2206
  Hbs:  VNG1390a
  Mac:  MA3546
  Mth:  MTH1896
  Mja:  MJ1030
  Mka:  MK1504
  Tac:  Ta1194_1
  Tvo:  TVN0403_1
  Pho:  PH0624
  Pab:  PAB0944
  Pya:  PAE0887
  Sce:  YGR277c
  Spo:  SPAC1F12.08
_______

[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins
  Sce:  YBR115c_1
  Spo:  SPAC23G3.02c_1 SPAC23G3.02c_2 SPAC23G3.02c_3 SPAC23G3.02c_4 SPAC23G3.02c_5 SPAP7G5.04c_1 SPCC162.02c_1
  Cgl:  Cgl1121_1 Cgl2655_1
  Mtu:  Rv0101_2 Rv0101_3 Rv1182 Rv2379c Rv2380c_1 Rv2380c_2 Rv2383c_2
        Rv2935_2 Rv3820c Rv3824c
  MtC:  MT0110_2 MT0110_3 MT1219 MT2447 MT2448_1 MT2448_2 MT2451_2
        MT3005_2 MT3429 MT3928 MT3932
  Mle:  ML1230 ML1996_2 ML2353_2
  Lla:  L91510
  Spy:  SPy1312
  Spn:  SP2176
  Sau:  SA0173_1 SA0173_2 SA0793
  Lin:  lin0973
  Bsu:  BS_dhbF BS_dltA BS_pksK_1 BS_pksN BS_pksP_1 BS_ppsA_1 BS_ppsA_2
        BS_ppsB_1 BS_ppsB_2 BS_ppsC_1 BS_ppsC_2 BS_ppsD_1 BS_ppsD_2 BS_ppsD_3
        BS_ppsE_1 BS_srfAA_1 BS_srfAA_2 BS_srfAA_3 BS_srfAB_1 BS_srfAB_2 BS_srfAB_3
        BS_srfAC_1 BS_yukL_1
  Nos:  all1647 all1648_2 all1695_1 all2642 all2643 all2644_1 all2644_2
        all2645_1 all2645_2 all2647 all2648_1 all2648_2 all2649
  Eco:  entF_1
  EcZ:  ZentF_1
  Ecs:  ECs0625_1
  Ype:  YPO0776 YPO0777 YPO0778_1 YPO0778_2 YPO1910_2 YPO1911_2 YPO1911_3
  Sty:  STM0588_1
  Vch:  VC0775 VC1579 VC2209_1 VC2209_2 VC2209_3
  Pae:  PA1221 PA2302_1 PA2302_3 PA2305 PA2399_1 PA2399_2 PA2400
        PA2401 PA2402_1 PA2402_2 PA2402_3 PA2402_4 PA2424_2 PA2424_3
        PA2424_4 PA3327_1 PA3327_2 PA3329 PA4078_1 PA4225_1 PA4226_2
  Rso:  RSc1806_3 RSc1806_4 RSc1810_2 RSc1811_1 RSp0641_5 RSp0641_6 RSp0641_7
        RSp0641_8 RSp0642_1 RSp0642_2 RSp0642_3 RSp0642_4 RSp0642_5 RSp1422_1
        RSp1434
  Cje:  Cj1307
  Atu:  AGl2308 AGl2309_1 AGl2309_2 AGl2311_1 AGl2311_2 AGl2323_1 AGl2333
        AGl3476
  Bme:  BMEII0076
  Mlo:  mll6746_1 mll6752_1 mll9722_1 mlr1968_1 mlr6282_1 mlr9052
_______

[Q] COG1021 Peptide arylation enzymes
  Mtu:  Rv2384
  MtC:  MT2452
  Bsu:  BS_dhbE
  Eco:  entE
  EcZ:  ZentE
  Ecs:  ECs0633
  Ype:  YPO1907
  Sty:  STM0596
  Vch:  VC0772
  Pae:  PA4228
  Bme:  BMEII0078
_______

[I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
  Afu:  AF0200
  Hbs:  VNG2071G
  Pya:  PAE2464_1
  Ape:  APE1307
  Sce:  YER015w YIL009w YMR246w YOR317w
  Spo:  SPBC18H10.02 SPBP4H10.11c
  Ecu:  ECU10g0890 ECU10g0910
  Aae:  aq_999_1
  Fnu:  FN0867_1 FN1122_1
  Cgl:  Cgl2244
  Mtu:  Rv1550 Rv2187 Rv2590_1
  MtC:  MT1600 MT2242 MT2667_1
  Mle:  ML0484_1 ML0887
  Syn:  slr1609
  Nos:  alr3602
  Ype:  YPO0537
  Vch:  VC2341 VC2484 VCA1110
  Pae:  PA1617
  Hin:  HI0002
  Pmu:  PM0925
  Tpa:  TP0145
  Bbu:  BB0137 BB0593
_______

[G] COG1023 Predicted 6-phosphogluconate dehydrogenase
  Hbs:  VNG2553G
  Aae:  aq_498
  Dra:  DR1595
  Mtu:  Rv1122
  MtC:  MT1154
  Lla:  L53699
  Bsu:  BS_yqeC
  Bha:  BH2674
  Atu:  AGl99
  Mlo:  mlr4206
_______

[I] COG1024 Enoyl-CoA hydratase/carnithine racemase
  Afu:  AF0017_2 AF0285_2 AF0435 AF0685 AF0963 AF1122_2 AF1641
        AF2273_2 AF2429
  Hbs:  VNG0428G VNG1313G_2 VNG2032Gm
  Tac:  Ta0061 Ta0121 Ta0291_2 Ta0440 Ta1232
  Tvo:  TVN0017 TVN0198 TVN0363 TVN0915 TVN1310_2
  Pya:  PAE1383_2 PAE1650 PAE2479
  Sso:  SSO0050 SSO0654 SSO1311 SSO2017 SSO2514_2 SSO2535 SSO2623
        SSO2624
  Ape:  APE0056 APE0591 APE1484_2
  Sce:  YDR036c_1 YLR284c YOR180c
  Spo:  SPBC2D10.09
  Aae:  aq_1156_2
  Fnu:  FN0271 FN1020
  Dra:  DR0114 DR0184 DR1151 DR1487_1 DR2477_2 DR2510
  Cac:  CAC2012 CAC2016 CAC2712
  Cgl:  Cgl0895
  Mtu:  Rv0222 Rv0456c Rv0632c Rv0673 Rv0675 Rv0860_1 Rv0905
        Rv0971c Rv1070c Rv1071c Rv1136 Rv1141c Rv1142c Rv1472
        Rv1935c Rv2486 Rv2679 Rv2831 Rv3039c Rv3373 Rv3374
        Rv3516 Rv3550 Rv3774
  MtC:  MT0232 MT0472 MT0660 MT0702 MT0704 MT0883_1 MT0928
        MT0999.1 MT1100 MT1101 MT1169.1 MT1174 MT1175 MT1518
        MT1985 MT2560 MT2753 MT2897 MT3124 MT3617 MT3654
        MT3883
  Mle:  ML0120 ML1241 ML1724 ML2118 ML2161_1 ML2401 ML2402
        ML2498
  Spy:  SPy1758
  Spn:  SP0415
  Sau:  SA0224_2
  Bsu:  BS_pksH BS_pksI BS_yhaR BS_yngF BS_ysiB BS_yusL_2
  Bha:  BH0201 BH0202 BH0207 BH1135 BH1849 BH1996 BH2582
        BH3101 BH3488_2 BH3824
  Nos:  alr4455
  Eco:  caiD fadB_1 paaG ydbS yfcX_1 ygfG
  EcZ:  Z3604_1 ZcaiD ZfadB_1 ZygfG
  Ecs:  ECs0039 ECs3224_1 ECs3789 ECs4774_1
  Ype:  YPO1458 YPO1459 YPO2747_1 YPO3766_1
  Sty:  STM0070 STM2388_1 STM3983_1
  Vch:  VC1047_1 VC2758_1
  Pae:  PA0744 PA0745 PA1021 PA1240 PA1629 PA1737_1 PA1748
        PA1821 PA2013 PA2767 PA2841 PA2890 PA3014_1 PA3426
        PA3591 PA4330 PA4980
  Xfa:  XF1115
  Rso:  RSc0267 RSc0304 RSc0474_2 RSc0476 RSc1298 RSc1759_1 RSc2014
        RSc2872 RSc2873 RSp0035 RSp0225 RSp0647 RSp0648 RSp0671
  Atu:  AGc1329 AGc2617 AGc562 AGc888_1 AGl2647 AGl2700
  Sme:  SMa1408 SMb20752 SMb21126 SMb21633 SMc00976 SMc01153 SMc01641
        SMc01669 SMc01806 SMc02227_1 SMc04398
  Bme:  BMEI0022 BMEI0023 BMEI1196 BMEI1522 BMEI1927 BMEI1928 BMEI1945
        BMEII0214 BMEII0497_1 BMEII1021
  Mlo:  mll1009 mll4199_1 mll5431 mll5584 mll6015 mll6870 mll8753
        mlr1841 mlr3048 mlr5044 mlr5629_1 mlr5639 mlr6976 mlr7453
        mlr8134 mlr8392 mlr8461
  Ccr:  CC0006 CC0076_1 CC0353 CC0397 CC0947 CC1352 CC1723
        CC1813_1 CC1814 CC1851 CC2169 CC2401 CC2575 CC3084
        CC3189_1
  Rpr:  RP560_2
  Rco:  RC0836 RC0837 RC0838
_______

[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like
  Sce:  YLR389c YPR122w
  Spo:  SPACUNK4.12c
  Ecu:  ECU06g0750
  Eco:  ptr
  EcZ:  Zptr
  Ecs:  ECs3678
  Ype:  YPO1019
  Sty:  STM2995
  Vch:  VC2072
  Pae:  PA1973
  Ctr:  CT806
  Cpn:  CPn0957
_______

[R] COG1026 Predicted Zn-dependent peptidases, insulinase-like
  Sce:  YDR430c YOL098c
  Spo:  SPAC3H1.02c SPBC119.17
  Dra:  DR0617
  Cac:  CAC1654 CAC3006
  Ctr:  CT824
  Cpn:  CPn0981
  Tpa:  TP0025
  Bbu:  BB0228
_______

[E] COG1027 Aspartate ammonia-lyase
  Tac:  Ta0258
  Tvo:  TVN1336
  Tma:  TM0444
  Cac:  CAC0274 CAC1652
  Cgl:  Cgl1467
  Bsu:  BS_ansB
  Bha:  BH1426
  Nos:  alr3724
  Eco:  aspA
  EcZ:  ZaspA
  Ecs:  ECs5120
  Ype:  YPO0348
  Sty:  STM4326
  Vch:  VC2698
  Pae:  PA5429
  Hin:  HI0534
  Pmu:  PM1103
  Nme:  NMB1029
  NmA:  NMA1459
  Hpy:  HP0649
  jHp:  jhp0594
  Cje:  Cj0087
  Atu:  AGl2078
  Bme:  BMEI0109
_______

[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  Afu:  AF1207
  Hbs:  VNG0364G VNG0479G VNG1341G VNG1540G VNG1748C VNG2158G VNG2632G
  Mac:  MA0107 MA0415 MA0479 MA1321 MA2686 MA2687
  Tac:  Ta0191 Ta0205 Ta0251 Ta0441 Ta0481_2 Ta0672 Ta0747
        Ta0754 Ta0822 Ta0913
  Tvo:  TVN0075 TVN0448_2 TVN0711 TVN1059 TVN1344 TVN1406
  Pho:  PH1809 PH1901
  Pab:  PAB0245 PAB1085 PAB2177
  Pya:  PAE0025 PAE0797 PAE1589 PAE2089 PAE2832
  Sso:  SSO0975 SSO1542 SSO2205 SSO2276 SSO2289 SSO2500 SSO2664
        SSO3004 SSO3114
  Ape:  APE0912 APE1361 APE2503
  Sce:  YBR265w YDL114w YIL124w YIR035c YIR036c YKL055c YKL071w
        YKL107w YKR009c_1 YLR100w YLR426w YNL181w YNL202w YOR246c
        YPL033c
  Spo:  SPAC1348.09 SPAC19A8.06 SPAC22A12.17c SPAC23D3.11 SPAC3G9.02 SPAC4H3.08 SPAC8E11.10
        SPAC922.06 SPAC977.08 SPBC16H5.14c SPBC1709.07 SPBC30D10.05c SPCC1450.15_1 SPCC162.03
        SPCC1739.08c SPCC24B10.20 SPCC663.06c SPCC663.08c SPCC663.09c SPCC736.13
  Ecu:  ECU10g0560 ECU11g1070
  Aae:  aq_1010 aq_1240 aq_1716
  Tma:  TM0019 TM0297 TM0325 TM0441 TM1169 TM1724
  Fnu:  FN0216 FN0494 FN1687
  Dra:  DR0088 DR0113 DR0411 DR0730 DR0822 DR1467 DR1620
        DR1700_2 DR1938 DR1943 DR2595 DRA0195 DRA0200 DRA0364
        DRB0036 DRB0080
  Cac:  CAC0361 CAC1331 CAC1423 CAC1576 CAC2607 CAC2626 CAC3335
        CAC3462 CAC3484 CAC3574
  Cgl:  Cgl0190 Cgl0286 Cgl0321 Cgl0536 Cgl0699 Cgl1008 Cgl1009
        Cgl1450 Cgl2083 Cgl2355 Cgl2390 Cgl2619 Cgl2992
  Mtu:  Rv0068 Rv0148 Rv0242c Rv0303 Rv0439c Rv0547c Rv0687
        Rv0765c Rv0769 Rv0851c Rv0927c Rv0945 Rv1050 Rv1144
        Rv1245c Rv1350 Rv1483 Rv1543 Rv1714 Rv1856c Rv1865c
        Rv1882c Rv1928c Rv1941 Rv2002 Rv2073c Rv2129c Rv2214c_2
        Rv2263 Rv2750 Rv2766c Rv2857c Rv3057c Rv3085 Rv3174
        Rv3224 Rv3391_2 Rv3485c Rv3502c Rv3530c Rv3548c Rv3549c
        Rv3559c Rv3791
  MtC:  MT0074 MT0156 MT0256 MT0316 MT0455 MT0572 MT0715
        MT0789 MT0793 MT0874 MT0954 MT0971 MT1080 MT1177
        MT1283 MT1393 MT1530 MT1595 MT1753.1 MT1904 MT1914
        MT1931 MT1991 MT2058 MT2133 MT2187 MT2270_2 MT2323
        MT2820 MT2836 MT2925 MT3143 MT3170 MT3263 MT3321
        MT3498_2 MT3589 MT3606 MT3633 MT3652 MT3653 MT3664
        MT3899
  Mle:  ML0108 ML0315 ML0862_2 ML1094 ML1740 ML1807 ML2059
        ML2565
  Lla:  L0185 L118271 L121175 L142816 L143350 L1530 L172964
        L27694 L77482
  Spy:  SPy0440 SPy0636 SPy1640 SPy1749
  Spn:  SP0320 SP0421 SP0793
  Sau:  SA0122 SA1074 SA1123 SA2119 SA2260 SA2365
  Lin:  lin0362 lin0674 lin1431 lin1796 lin1921 lin1944 lin2278
        lin2948
  Bsu:  BS_dhbA BS_fabG BS_gdh BS_kduD BS_ycdF BS_ydaD BS_yfhR
        BS_yhdF BS_yhxC BS_yhxD BS_yjdA BS_yjmF BS_ykuF BS_ykvO
        BS_ymfI BS_yoxD BS_ytkK BS_yueD BS_yusR BS_yusS BS_yusZ
        BS_yuxG_2 BS_yvaG BS_yvrD BS_ywfD BS_ywfH BS_yxbG BS_yxjF
        BS_yxnA
  Bha:  BH0316 BH0410 BH0506 BH0707 BH0800 BH0932 BH0938
        BH1067 BH1510 BH1511 BH1550_2 BH1842 BH1843 BH2144
        BH2167 BH2210 BH2391 BH2491 BH3182 BH3896
  Syn:  sll0330 sll1308 sll1376 sll1704 sll1709 sll1825 slr0506
        slr0886 slr1208_2 slr1994 slr2124
  Nos:  all0352 all0968 all1418 all1420 all1743 all1884 all2963
        all3805 all3836 alr0430 alr1722 alr1894 alr1909 alr2920
        alr3252 alr3897 alr4456 alr5182 alr5286 alr5358
  Eco:  entA fabG hcaB hdhA idnO kduD srlD
        ucpA ybbO yciK ydgB ygcW ygfF yjgI
        yohE yohF yqhB
  EcZ:  Z1533 Z1545 Z4865 Z5618 ZentA ZfabG ZhcaB
        ZhdhA ZkduD ZsrlD ZucpA ZybbO ZyciK ZydgB
        ZygcW ZyghA ZyjgI ZyohF
  Ecs:  ECs0556 ECs0635 ECs1275 ECs1285 ECs1471 ECs1843 ECs2312
        ECs2327 ECs3024 ECs3297 ECs3407 ECs3561 ECs3630 ECs3699
        ECs3887 ECs4340 ECs5003 ECs5226
  Ype:  YPO0839 YPO1287 YPO1452 YPO1456 YPO1460 YPO1565 YPO1599
        YPO1724 YPO1811_2 YPO1993 YPO2215 YPO2539 YPO3081 YPO3199
        YPO3351
  Sty:  STM0505 STM0598 STM1195 STM1675 STM1717 STM2171 STM2445
        STM2835 STM3017 STM3157 STM4483
  Buc:  BU351
  Vch:  VC0774 VC0979 VC1059 VC1119 VC1591 VC1815 VC2021
        VC2047 VCA0301 VCA0691 VCA1108
  Pae:  PA0117 PA0182 PA1023 PA1066 PA1330 PA1344 PA1379
        PA1470 PA1537 PA1649 PA1827 PA1828 PA2003 PA2099
        PA2142 PA2515 PA2554 PA2887 PA2892 PA2918 PA2967
        PA3106 PA3128 PA3173 PA3277 PA3324_2 PA3330 PA3387
        PA3427 PA3437 PA3507 PA3511 PA3883 PA3957 PA4079
        PA4089 PA4098 PA4148 PA4162 PA4389 PA4786 PA5031
        PA5150 PA5521 PA5524
  Hin:  HI0048 HI0155
  Pmu:  PM1916 PM1968
  Xfa:  XF0173 XF0319 XF0671 XF0913 XF1457 XF1726 XF1741
        XF2082 XF2269 XF2716
  Nme:  NMB1127 NMB1165 NMB1702 NMB1921
  NmA:  NMA0533 NMA1336
  Rso:  RSc0156 RSc0171 RSc0215 RSc0275 RSc0284 RSc0435 RSc0536
        RSc1029 RSc1052 RSc1568 RSc1572 RSc1633 RSc1730 RSc1763
        RSc1769 RSc1838 RSc2147 RSc2186 RSc2351 RSc2504 RSc2534
        RSc2597 RSc2753 RSc3138 RSc3209 RSc3331 RSp0033 RSp0230
        RSp0305 RSp0359 RSp0446 RSp0589 RSp0697 RSp0947 RSp1059
        RSp1123
  Hpy:  HP0561 HP0890 HP1014
  jHp:  jhp0409 jhp0508 jhp0823
  Cje:  Cj0435 Cj0485 Cj0807 Cj1332
  Atu:  AGc1273 AGc1817 AGc1984 AGc2026 AGc2091 AGc2317 AGc2465
        AGc2598 AGc2613 AGc3482 AGc3496 AGc3699 AGc4198 AGc4386
        AGc4705 AGc4837 AGc5024 AGl1000 AGl1073 AGl117 AGl126
        AGl1444 AGl1541 AGl2039 AGl2341 AGl2470 AGl2601 AGl2690_2
        AGl28 AGl2975 AGl3035 AGl3292 AGl3337 AGl3471 AGl3508
        AGl3556 AGl43 AGl509 AGl561 AGl595 AGl807 AGl91
        AGpA178 AGpA214 AGpA252 AGpA258 AGpA293 AGpA300 AGpA355
        AGpA398 AGpA417 AGpA564 AGpA642 AGpA687 AGpA801 AGpT126
        AGpT46
  Sme:  SMa0059 SMa0074 SMa0187 SMa0326 SMa0329 SMa0335 SMa0339
        SMa0389 SMa0513 SMa0719 SMa0854 SMa0959 SMa1367 SMa1398
        SMa1452 SMa1629 SMa1757 SMa1779 SMa1967 SMa2019 SMa2165
        SMb20073 SMb20076 SMb20210 SMb20409 SMb20456 SMb20492 SMb20493
        SMb20511 SMb20662 SMb20692 SMb20693 SMb20750 SMb20871 SMb20974
        SMb21010 SMb21111 SMb21159 SMb21348 SMb21383 SMb21474 SMc00136
        SMc00165 SMc00260 SMc00264 SMc00268 SMc00372 SMc00553 SMc00572
        SMc00603 SMc00733 SMc00778 SMc00880 SMc01157 SMc01175 SMc01500
        SMc01571 SMc01635 SMc01698 SMc01955 SMc01991 SMc02034 SMc02037
        SMc02041 SMc02271 SMc02322_2 SMc02336 SMc02339 SMc02486 SMc02522
        SMc03878 SMc04391
  Bme:  BMEI0026 BMEI0032 BMEI0090 BMEI0268 BMEI0394 BMEI0395 BMEI0405
        BMEI0406 BMEI0666 BMEI0861 BMEI1235 BMEI1250 BMEI1477 BMEI1489
        BMEI1709 BMEI1832 BMEII0062 BMEII0063 BMEII0080 BMEII0283 BMEII0316
        BMEII0514 BMEII0543 BMEII0816 BMEII0872
  Mlo:  mll0352 mll0534 mll1017 mll1036 mll1830 mll1981 mll1982
        mll2041 mll2118 mll2196 mll2271 mll2413 mll2989 mll2997
        mll3081 mll3237 mll3372 mll3632 mll4054 mll4297 mll4781
        mll4921 mll4989 mll5243 mll5433 mll5540 mll5766 mll6713
        mll6717 mll6858 mll6862 mll7083 mll7191 mll7199 mll7289_2
        mll7334 mll7371 mll7832 mll8174 mll8564 mlr0808 mlr1526
        mlr1583 mlr1595 mlr1637 mlr1638 mlr1884 mlr1899 mlr2047
        mlr2182 mlr2400 mlr2473 mlr2535 mlr2780 mlr2803 mlr2833
        mlr3013 mlr3057 mlr3096 mlr3100 mlr3115 mlr3482 mlr3785
        mlr3848 mlr4150 mlr4172 mlr4741 mlr5208 mlr5248 mlr5278
        mlr5280 mlr5708_2 mlr5879 mlr5880 mlr6366 mlr6518 mlr6807
        mlr6893 mlr7055 mlr7057 mlr7106 mlr7680 mlr7850 mlr7910
        mlr9033 msl7784m
  Ccr:  CC0094 CC0124 CC0246 CC0398 CC0400 CC0417 CC0511
        CC0644 CC0821 CC1286 CC1492 CC1571 CC1656 CC1675
        CC1803 CC1804 CC1808 CC1816 CC2093 CC2306 CC2655
        CC2836 CC2861 CC2966 CC2979 CC3076 CC3175 CC3380
        CC3384 CC3685
  Rpr:  RP035 RP762
  Rco:  RC0054 RC1183 RC1363 RC1364
  Ctr:  CT237
  Cpn:  CPn0296
_______

[C] COG1029 Formylmethanofuran dehydrogenase subunit B
  Afu:  AF1650 AF1929
  Mac:  MA0309 MA0834 MA1241 MA2878 MA4178
  Mth:  MTH1559 MTH919
  Mja:  MJ1194m
  Mka:  MK0259 MK1527
_______

[O] COG1030 Membrane-bound serine protease (ClpP class)
  Afu:  AF1781
  Mac:  MA0915
  Tac:  Ta1083
  Tvo:  TVN0492
  Pho:  PH1510
  Pab:  PAB1932
  Pya:  PAE0749 PAE2539
  Ape:  APE2151
  Aae:  aq_1820
  Sau:  SA1403
  Bsu:  BS_yqeZ
  Bha:  BH1356 BH1405
  Pae:  PA0451
  Rso:  RSc0803
  Sme:  SMb20990
  Mlo:  mll1933
_______

[C] COG1031 Uncharacterized Fe-S oxidoreductase
  Afu:  AF0243
  Hbs:  VNG0284C
  Mac:  MA2850
  Mja:  MJ0274
  Mka:  MK1040
  Pho:  PH0094
  Pab:  PAB0059
  Pya:  PAE0707
  Ape:  APE2493
  Tma:  TM1601
_______

[C] COG1032 Fe-S oxidoreductase
  Afu:  AF1311 AF1634m AF1684
  Mac:  MA0242 MA4618
  Mth:  MTH1171 MTH1784 MTH1895
  Mja:  MJ0865 MJ0966 MJ1155 MJ1487 MJ1620
  Mka:  MK0788 MK0797 MK0895 MK0932 MK0992 MK1382 MK1429
  Tac:  Ta0216 Ta0288m Ta0491 Ta0871 Ta0906 Ta1390
  Tvo:  TVN0581 TVN0937 TVN1010 TVN1313 TVN1378
  Pho:  PH0819 PH1701 PH1949
  Pab:  PAB0314 PAB1143
  Pya:  PAE0656 PAE1112 PAE2426 PAE2438
  Sso:  SSO0477 SSO0604 SSO2881
  Ape:  APE1158 APE2109
  Tma:  TM0182 TM0337 TM0582 TM0770 TM0884 TM1334 TM1537
  Fnu:  FN0392 FN0734
  Dra:  DR1298 DRA0244 DRC0036
  Cac:  CAC1021 CAC1072 CAC1254 CAC2010 CAC2422
  Mtu:  Rv0213c
  MtC:  MT0223
  Lla:  L180742
  Bha:  BH2952_1
  Syn:  sll0424 sll1084_1 sll1242 slr0309 slr0320 slr0905
  Nos:  all0794 all2023 all3902 all4307 alr0030 alr2104 alr4330_1
  Eco:  ygiR+Q
  EcZ:  Z4370
  Ecs:  ECs3900
  Sty:  STM3168
  Vch:  VC1711
  Pae:  PA2956 PA4928
  Mlo:  mll4828
_______

[R] COG1033 Predicted exporters of the RND superfamily
  Afu:  AF0459 AF1229
  Hbs:  VNG1476C
  Mac:  MA0286 MA0352 MA0400 MA2056 MA2208
  Mja:  MJ1562
  Mka:  MK1056
  Pho:  PH0287
  Pab:  PAB1101
  Tma:  TM0817 TM1294
  Bha:  BH0720
  Pae:  PA3079
  Cje:  Cj1373
  Tpa:  TP0790
  Bbu:  BB0252
_______

[C] COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
  Aae:  aq_437
  Tma:  TM0201_1 TM1426_1
  Dra:  DR1499
  Cac:  CAC0028_1
  Mtu:  Rv3151
  MtC:  MT3239
  Syn:  sll1223
  Nos:  alr0762
  Eco:  nuoG
  EcZ:  ZnuoG
  Ecs:  ECs3167
  Ype:  YPO2550
  Sty:  STM2323
  Buc:  BU159
  Pae:  PA2642
  Xfa:  XF0311
  Nme:  NMB0249
  NmA:  NMA0010
  Rso:  RSc2056
  Hpy:  HP1266
  jHp:  jhp1187
  Cje:  Cj1573c
  Atu:  AGc2353
  Sme:  SMc01920
  Bme:  BMEI1152
  Mlo:  mll1362
  Ccr:  CC1946
  Rpr:  RP797
  Rco:  RC1231
_______

[C] COG1035 Coenzyme F420-reducing hydrogenase, beta subunit
  Afu:  AF1833
  Mac:  MA0978 MA3732 MA4220 MA4520_2
  Mth:  MTH1139_1 MTH1297 MTH193 MTH280_1 MTH341
  Mja:  MJ0005_1 MJ0032 MJ0725 MJ0870_1 MJ1349
  Mka:  MK0322 MK0539 MK0799_1 MK0929
  Syn:  slr1923
  Nos:  all1601
  Sme:  SMb20252
_______

[C] COG1036 Archaeal flavoproteins
  Afu:  AF1518
  Mac:  MA0696 MA3741
  Mth:  MTH1379 MTH697
  Mja:  MJ0208 MJ0730
  Mka:  MK1484
_______

[C] COG1038 Pyruvate carboxylase
  Sce:  YBR218c YGL062w
  Spo:  SPBC17G9.11c
  Cac:  CAC2660
  Cgl:  Cgl669
  Mtu:  Rv2967c
  MtC:  MT3045
  Lla:  L63652
  Sau:  SA0963
  Lin:  lin1060
  Bsu:  BS_pycA
  Bha:  BH2625
  Atu:  AGc4940
  Sme:  SMc03895
  Bme:  BMEI0266
  Mlo:  mll3969
_______

[L] COG1039 Ribonuclease HIII
  Aae:  aq_1768
  Lla:  L132875
  Spy:  SPy1841
  Spn:  SP0403
  Sau:  SA0987
  Lin:  lin1191
  Bsu:  BS_ysgB
  Ctr:  CT008
  Cpn:  CPn1068
  Uur:  UU397
  Mpu:  MYPU_3000
  Mpn:  MPN118
  Mge:  MG199
_______

[R] COG1040 Predicted amidophosphoribosyltransferases
  Aae:  aq_2059
  Tma:  TM1584
  Fnu:  FN1368
  Dra:  DR1389
  Cac:  CAC2852
  Mtu:  Rv3242c
  MtC:  MT3340
  Lla:  L0319
  Spy:  SPy1615
  Spn:  SP2207
  Sau:  SA0706
  Lin:  lin2656 pli0014
  Bsu:  BS_comFC
  Bha:  BH3625
  Syn:  slr0388
  Nos:  alr2926
  Eco:  yhgH
  EcZ:  ZyhgH
  Ecs:  ECs4254
  Ype:  YPO0128
  Sty:  STM3510
  Vch:  VC2719
  Pae:  PA0489
  Hin:  HI0434
  Pmu:  PM1556
  Xfa:  XF0063
  Nme:  NMB0269
  NmA:  NMA0604 NMA2217
  Rso:  RSc0359
  Hpy:  HP1473
  jHp:  jhp1366
  Cje:  Cj1028c
  Atu:  AGl2633
  Sme:  SMc02444
  Bme:  BMEI0183
  Mlo:  mll3453
  Ccr:  CC0830
  Rco:  RC0843 RC0844
  Tpa:  TP0776
  Bbu:  BB0798
_______

[L] COG1041 Predicted DNA modification methylase
  Afu:  AF1257
  Hbs:  VNG2242C
  Mac:  MA0209
  Mth:  MTH724
  Mja:  MJ0710
  Mka:  MK0894
  Tac:  Ta1417
  Tvo:  TVN1436
  Pho:  PH0338 PH0997
  Pab:  PAB1283 PAB1719
  Pya:  PAE1634
  Sso:  SSO1044
  Ape:  APE1835
  Sce:  YOL124c
  Spo:  SPBC16D10.02
_______

[C] COG1042 Acyl-CoA synthetase (NDP forming)
  Afu:  AF0932 AF1192 AF1211 AF1511_2 AF1938
  Hbs:  VNG0940Gm
  Mac:  MA3168 MA3602
  Mja:  MJ0590
  Mka:  MK1023 MK1246
  Tac:  Ta1153
  Tvo:  TVN1233
  Pho:  PH0625 PH0766 PH1517 PH1739 PH1788 PH1789 PH1928
  Pab:  PAB0203 PAB0854 PAB1230 PAB1431 PAB1937 PAB2112 PAB2113
  Pya:  PAE2895 PAE3249 PAE3250
  Sso:  SSO1806
  Nos:  all0769_1
  Eco:  yfiQ_1
  EcZ:  ZyfiQ_1
  Ecs:  ECs3450 ECs3451_1
  Ype:  YPO3272_1
  Sty:  STM2651_1
  Vch:  VCA0574_1
  Pae:  PA1017 PA4978
  Nme:  NMB0593_1
  NmA:  NMA0796_1
  Sme:  SMa1146_1 SMc01640
  Mlo:  mlr5043 mlr6591_1
_______

[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
  Aae:  aq_604
  Fnu:  FN0595
  Syn:  sll0379
  Nos:  alr2272
  Eco:  lpxA
  EcZ:  ZlpxA
  Ecs:  ECs0183
  Ype:  YPO1056
  Sty:  STM0228
  Vch:  VC2248
  Pae:  PA3644
  Hin:  HI1061
  Pmu:  PM1996
  Xfa:  XF1043
  Nme:  NMB0178
  NmA:  NMA0090
  Rso:  RSc1416
  Hpy:  HP1375
  jHp:  jhp1289
  Cje:  Cj0274
  Atu:  AGc2560
  Sme:  SMc02091
  Bme:  BMEI0833
  Mlo:  mll0633
  Ccr:  CC1911
  Rpr:  RP007
  Rco:  RC0008
  Ctr:  CT531
  Cpn:  CPn0650
_______

[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
  Aae:  aq_538
  Fnu:  FN1909
  Syn:  slr0776
  Nos:  alr3074
  Eco:  lpxD
  EcZ:  ZlpxD
  Ecs:  ECs0181
  Ype:  YPO1054
  Sty:  STM0226
  Vch:  VC2250
  Pae:  PA3646
  Hin:  HI0915
  Pmu:  PM1994
  Xfa:  XF0486 XF0918 XF1045 XF1419 XF1646
  Nme:  NMB0180
  NmA:  NMA0087
  Rso:  RSc1414
  Hpy:  HP0196
  jHp:  jhp0182
  Cje:  Cj0576
  Atu:  AGc2556
  Sme:  SMc02093
  Bme:  BMEI0831
  Mlo:  mll0635
  Ccr:  CC1913
  Rpr:  RP009
  Rco:  RC0010
  Ctr:  CT243
  Cpn:  CPn0302
_______

[E] COG1045 Serine acetyltransferase
  Hbs:  VNG1481G
  Mac:  MA2721_1 MA2737 MA3442
  Spo:  SPAC1039.08
  Tma:  TM0666
  Cac:  CAC0687
  Cgl:  Cgl2509
  Mtu:  Rv2335
  MtC:  MT2398
  Mle:  ML0838
  Lla:  L0087
  Spy:  SPy1944
  Spn:  SP0589
  Sau:  SA0487
  Lin:  lin0270
  Bsu:  BS_cysE
  Bha:  BH0110
  Syn:  slr1348
  Nos:  all4037 alr1404
  Eco:  cysE wcaB
  EcZ:  Z2984 ZcysE ZwcaB
  Ecs:  ECs2638 ECs2863 ECs4485
  Ype:  YPO0070
  Sty:  STM2114 STM3699
  Buc:  BU054
  Vch:  VC0919 VC0923 VC2649
  Pae:  PA2105 PA3816
  Hin:  HI0606
  Pmu:  PM1430
  Nme:  NMB0560
  NmA:  NMA0742
  Rso:  RSc1162 RSp1439
  Hpy:  HP1210
  jHp:  jhp1133
  Cje:  Cj0763c
  Atu:  AGc2882 AGc2895
  Sme:  SMc02113
  Bme:  BMEI0734
  Mlo:  mlr0175
  Ccr:  CC2651
_______

[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2
  Afu:  AF1989
  Hbs:  VNG1294G
  Mac:  MA2813 MA3136 MA3137 MA3138
  Mth:  MTH1125
  Mja:  MJ0278 MJ0825
  Mka:  MK1231
  Tac:  Ta1011
  Tvo:  TVN0578
  Pho:  PH1399
  Pab:  PAB1864
  Pya:  PAE0805
  Sso:  SSO0758
  Ape:  APE0517
  Fnu:  FN1875
  Dra:  DR2464
  Eco:  slpA slyD
  EcZ:  ZslpA ZslyD
  Ecs:  ECs0031 ECs4200
  Ype:  YPO0193 YPO0476a
  Sty:  STM0048 STM3455
  Vch:  VC0684 VC2604
  Pae:  PA0837 PA4558
  Hin:  HI0699
  Pmu:  PM1567
  Xfa:  XF0652
  Nme:  NMB1522
  NmA:  NMA1722
  Rso:  RSc1149 RSc2443
  Hpy:  HP1123
  jHp:  jhp1052
  Cje:  Cj0115
  Tpa:  TP0349
_______

[C] COG1048 Aconitase A
  Hbs:  VNG2574G
  Mac:  MA0250
  Tac:  Ta0112
  Tvo:  TVN0189
  Pya:  PAE1499
  Sso:  SSO1095
  Ape:  APE1618
  Sce:  YDR234w YJL200c YLR304c
  Spo:  SPAC24C9.06c SPAC343.16 SPBP4H10.15
  Aae:  aq_1784
  Dra:  DR1720
  Cac:  CAC0971
  Cgl:  Cgl1503
  Mtu:  Rv1475c
  MtC:  MT1522
  Mle:  ML1814
  Lla:  L68478
  Sau:  SA1184
  Lin:  lin1682
  Bsu:  BS_citB
  Eco:  acnA ybhJ
  EcZ:  ZacnA ZybhJ
  Ecs:  ECs0799 ECs1849
  Ype:  YPO2221
  Sty:  STM1712
  Vch:  VC1338
  Pae:  PA0794 PA1562
  Xfa:  XF0290
  Nme:  NMB0433
  NmA:  NMA2052
  Rso:  RSc2003 RSp0120 RSp0330
  Atu:  AGc4866
  Sme:  SMc03846
  Bme:  BMEI1855
  Mlo:  mlr4335
  Ccr:  CC3667
  Rpr:  RP799
  Rco:  RC1233
_______

[C] COG1049 Aconitase B
  Syn:  slr0665
  Nos:  all1267
  Eco:  acnB
  EcZ:  ZacnB
  Ecs:  ECs0122
  Ype:  YPO3415
  Sty:  STM0158
  Vch:  VC0604
  Pae:  PA1787
  Pmu:  PM0204
  Xfa:  XF0292
  Nme:  NMB1572
  NmA:  NMA1761
  Rso:  RSp0332
  Hpy:  HP0779
  jHp:  jhp0716
  Cje:  Cj0835c
  Atu:  AGl294
_______

[F] COG1051 ADP-ribose pyrophosphatase
  Afu:  AF1234
  Mac:  MA0113
  Mth:  MTH1315
  Mja:  MJ1149
  Mka:  MK1028
  Pho:  PH1579
  Pab:  PAB1968
  Pya:  PAE0810 PAE1918
  Sso:  SSO2278
  Ape:  APE2080
  Aae:  aq_1449
  Dra:  DR0192 DR0261 DR0550 DR0975 DR2428_2
  Cac:  CAC1777
  Cgl:  Cgl1046
  Mtu:  Rv1593c
  MtC:  MT1629
  Mle:  ML1224
  Lla:  L167097
  Spn:  SP1669
  Lin:  lin0490 lin2467
  Bsu:  BS_yjhB
  Bha:  BH3089
  Syn:  sll1537 slr0787_2 slr0920 slr1134 slr1690 ssr2806
  Nos:  all3870 all3899 alr2484
  Ype:  YPO1296
  Vch:  VCA0097
  Pae:  PA0990 PA2769 PA3755 PA4916 PA5081
  Rso:  RSc0809 RSc1618 RSp0835_2
  Atu:  AGc1950 AGc3368
  Sme:  SMc00521 SMc02554
  Bme:  BMEI1276
  Mlo:  mll7794
  Ccr:  CC1554 CC3382
  Rco:  RC0525
_______

[CHR] COG1052 Lactate dehydrogenase and related dehydrogenases
  Tac:  Ta0858
  Tvo:  TVN0960
  Pho:  PH0520 PH0597
  Pab:  PAB1008 PAB2374
  Pya:  PAE1038 PAE1175
  Sso:  SSO3187
  Ape:  APE1265 APE1831
  Sce:  YGL185c YNL274c YOR388c YPL113c YPL275w YPL276w
  Spo:  SPAC186.02c SPAC186.07c SPACUNK4.10 SPBC1773.17c
  Aae:  aq_727
  Fnu:  FN0487 FN0511 FN0965
  Cac:  CAC1543 CAC2691 CAC2945
  Spy:  SPy1170
  Sau:  SA0171 SA0791 SA2098 SA2312 SA2346
  Lin:  lin0070
  Bsu:  BS_yvcT
  Bha:  BH3314
  Syn:  slr1556
  Nos:  all8087 alr0058
  Eco:  ldhA yiaE
  EcZ:  ZldhA ZyiaE
  Ecs:  ECs2002 ECs4438
  Ype:  YPO2329 YPO2536 YPO4078
  Sty:  STM1647 STM3646
  Vch:  VC2504 VCA0192
  Pae:  PA0927 PA2263 PA3896 PA4626
  Hin:  HI0085 HI1556
  Pmu:  PM0559
  Nme:  NMB0029 NMB1685
  NmA:  NMA0274 NMA1944
  Rso:  RSc1034 RSc3131 RSp0505 RSp0945
  Hpy:  HP0096
  jHp:  jhp0088
  Cje:  Cj0373
  Atu:  AGc114 AGl1952 AGl379 AGl723 AGpA476
  Sme:  SMa0085 SMa0478 SMa0510 SMa2137 SMb20113 SMc01943 SMc02849
        SMc04462
  Bme:  BMEI1952 BMEII0313
  Mlo:  mlr5162 mlr5574 mlr7122
  Ccr:  CC2147 CC3722
  Tpa:  TP0037
_______

[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
  Afu:  AF0681 AF1463 AF1670
  Hbs:  VNG1306G
  Mth:  MTH1502
  Mja:  MJ0033
  Mka:  MK0828
  Tac:  Ta1001
  Tvo:  TVN0747
  Pya:  PAE0716 PAE2563 PAE2564
  Sso:  SSO2356
  Ape:  APE0950
  Sce:  YEL047c YJL045w YJR051w YKL148c
  Spo:  SPAC1556.02c SPAC17A2.05
  Aae:  aq_594
  Tma:  TM0427
  Fnu:  FN0050_2
  Dra:  DR0952
  Cac:  CAC0104
  Cgl:  Cgl0367 Cgl2564 Cgl2581
  Mtu:  Rv0248c Rv1552 Rv1817 Rv3318 Rv3537
  MtC:  MT0262 MT1603 MT1865 MT3419 MT3641
  Mle:  ML0697
  Lla:  L137630
  Sau:  SA0995
  Lin:  lin0374
  Bsu:  BS_sdhA
  Bha:  BH3092
  Syn:  slr1233
  Nos:  all2970
  Eco:  frdA sdhA
  EcZ:  ZfrdA ZsdhA
  Ecs:  ECs0748 ECs5135
  Ype:  YPO0360 YPO1111
  Sty:  STM0691 STM0734 STM4343
  Vch:  VC2089 VC2656
  Pae:  PA1583 PA2243 PA2298
  Hin:  HI0835
  Pmu:  PM0201
  Xfa:  XF1072
  Nme:  NMB0950
  NmA:  NMA1145
  Rso:  RSc1994
  Hpy:  HP0192
  jHp:  jhp0178
  Cje:  Cj0409 Cj0437
  Atu:  AGc4792
  Sme:  SMc02349 SMc02465
  Bme:  BMEI0161
  Mlo:  mll4263 mlr9192
  Ccr:  CC3527
  Rpr:  RP128
  Rco:  RC0170
  Ctr:  CT592
  Cpn:  CPn0789
_______

[R] COG1054 Predicted sulfurtransferase
  Dra:  DR1100
  Cgl:  Cgl2936
  Lla:  L38177
  Spy:  SPy0915
  Spn:  SP0095
  Sau:  SA2481
  Lin:  lin1421
  Bsu:  BS_ybfQ
  Syn:  sll0765
  Nos:  all0384
  Eco:  yceA
  EcZ:  ZyceA
  Ecs:  ECs1433
  Ype:  YPO2451
  Sty:  STM1156
  Buc:  BU365
  Vch:  VC1259
  Pae:  PA0858
  Xfa:  XF2609
  Rso:  RSc2206
  Atu:  AGl756
  Sme:  SMc03156
  Bme:  BMEII0007
  Mlo:  mll2992
  Ccr:  CC1060
  Rpr:  RP125
  Rco:  RC0167
  Ctr:  CT627
  Cpn:  CPn0734
_______

[P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases
  Afu:  AF2308
  Tac:  Ta0170m
  Tvo:  TVN0285
  Pho:  PH1912
  Pab:  PAB1107
  Pya:  PAE2457
  Sso:  SSO0144
  Ape:  APE0055
  Tma:  TM0934 TM1045
  Fnu:  FN1924 FN1925
  Mtu:  Rv2684 Rv2685 Rv3578
  MtC:  MT2758 MT2759 MT3684
  Mle:  ML1036
  Sau:  SA1592 SAP017
  Lin:  lin1338
  Bsu:  BS_ydfA BS_ywrK
  Bha:  BH1231 BH2999
  Syn:  slr0753
  Nos:  all3033
  Eco:  arsB b2639m
  EcZ:  ZarsB
  Ecs:  ECs4374
  Ype:  YPO3347
  Vch:  VCA1015
  Pae:  PA2278
  Nme:  NMB0570
  NmA:  NMA0753
  Rso:  RSc1033
  Cje:  Cj1187c
  Atu:  AGl2577
  Mlo:  mlr4884 mlr8128
  Ctr:  CT857
  Cpn:  CPn1015
_______

[H] COG1056 Nicotinamide mononucleotide adenylyltransferase
  Afu:  AF1488 AF2315
  Hbs:  VNG0301C
  Mac:  MA3731
  Mth:  MTH150
  Mja:  MJ0541
  Tac:  Ta0774
  Tvo:  TVN0845
  Pho:  PH0464
  Pab:  PAB1318
  Pya:  PAE1438 PAE2259
  Sso:  SSO0255
  Ape:  APE0513 APE1986
  Dra:  DR2428_1 DRA0273_1
  Mtu:  Rv0212c_1
  MtC:  MT0222_1
  Lla:  L0242_1
  Syn:  slr0787_1
  Eco:  nadR_2
  EcZ:  ZnadR_2
  Ecs:  ECs5348_2
  Ype:  YPO0444_2
  Sty:  STM4580_2
  Hin:  HI0763_2
  Pmu:  PM1387_2
  Rso:  RSp0835_1
_______

[H] COG1057 Nicotinic acid mononucleotide adenylyltransferase
  Sce:  YGR010w_2 YLR328w_2
  Spo:  SPAC806.06c
  Aae:  aq_036
  Tma:  TM0097
  Fnu:  FN1132
  Cac:  CAC1262 CAC1781
  Cgl:  Cgl2301
  Mtu:  Rv2421c
  MtC:  MT2494
  Mle:  ML1454
  Lla:  L106374 L26400
  Spy:  SPy0308
  Spn:  SP1747
  Sau:  SA1422
  Lin:  lin1523
  Bsu:  BS_yqeJ
  Bha:  BH1326
  Syn:  sll1916
  Nos:  all5063 alr2483
  Eco:  nadD
  EcZ:  ZybeN
  Ecs:  ECs0677
  Ype:  YPO2607
  Sty:  STM0645
  Buc:  BU446
  Vch:  VCA0208
  Pae:  PA4006 PA4917
  Xfa:  XF2179
  Nme:  NMB2024
  NmA:  NMA0416
  Rso:  RSc2193
  Hpy:  HP1337
  jHp:  jhp1256
  Cje:  Cj1404
  Atu:  AGc5040
  Sme:  SMc03778
  Bme:  BMEI0209
  Mlo:  mll4008
  Ccr:  CC3431
  Tpa:  TP0741
  Bbu:  BB0782
  Uur:  UU469_1
  Mpu:  MYPU_3350_1
  Mpn:  MPN336_1
  Mge:  MG240_1
_______

[R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
  Afu:  AF2251
  Hbs:  VNG0761G
  Tac:  Ta0487
  Tvo:  TVN0585
  Pho:  PH0439
  Pab:  PAB1305
  Pya:  PAE0875
  Sso:  SSO0103
  Ape:  APE1980
  Sce:  YMR178w
  Tma:  TM0703_1
  Fnu:  FN1929_1
  Dra:  DR2338_1
  Cac:  CAC3586_1
  Mtu:  Rv1901_1
  MtC:  MT1952_1
  Mle:  ML2015_1
  Spy:  SPy2117_1
  Spn:  SP1941_1
  Sau:  SA1127
  Lin:  lin1434_1
  Bsu:  BS_cinA_1
  Bha:  BH2385_1
  Syn:  slr0427_1
  Nos:  alr4808_1
  Eco:  yfaY
  EcZ:  Z3507
  Ecs:  ECs3137
  Ype:  YPO1210
  Sty:  STM2288 STM2293
  Vch:  VC1252
  Nme:  NMB2128
  NmA:  NMA0304
  Rso:  RSc1256
  Atu:  AGc3176
  Sme:  SMc00944
  Bme:  BMEI0937
  Mlo:  mll0144
  Ccr:  CC2674
_______

[L] COG1059 Thermostable 8-oxoguanine DNA glycosylase
  Afu:  AF0371
  Mja:  MJ0724
  Tac:  Ta0014m
  Tvo:  TVN0062
  Sso:  SSO0904
  Aae:  aq_251
  Tma:  TM1821
  Fnu:  FN0622
_______

[HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
  Afu:  AF0388 AF0390 AF0797 AF0798
  Hbs:  VNG1937C VNG1938C
  Mac:  MA1489 MA1490 MA1491
  Mth:  MTH1198 MTH820
  Mja:  MJ0446 MJ1431
  Mka:  MK0897 MK0898
  Tac:  Ta0215 Ta0217
  Tvo:  TVN1377 TVN1379
  Pya:  PAE1163 PAE1164
  Ape:  APE0249 APE0252
  Aae:  aq_648 aq_789
  Tma:  TM1267
  Fnu:  FN1753
  Dra:  DR0064 DR0366
  Cac:  CAC1356 CAC2921
  Mtu:  Rv1173
  MtC:  MT1210
  Mle:  ML1492
  Bha:  BH3143 BH3411
  Syn:  sll1285 sll1659
  Nos:  alr3573 alr4129
  Eco:  thiH
  EcZ:  ZthiH
  Ecs:  ECs4913
  Ype:  YPO3743
  Sty:  STM4159
  Vch:  VC0066
  Hpy:  HP0654 HP0656
  jHp:  jhp0599 jhp0601
  Cje:  Cj0462 Cj1044c Cj1368
  Ctr:  CT426 CT767
  Cpn:  CPn0513 CPn0911
_______

[KL] COG1061 DNA or RNA helicases of superfamily II
  Afu:  AF0358
  Hbs:  VNG1406Gm VNG6130G VNG7093
  Mac:  MA1603_2 MA2403 MA2897
  Tac:  Ta1016
  Tvo:  TVN0573
  Pho:  PH0210 PH0450 PH1064_1
  Pab:  PAB0128 PAB1312
  Pya:  PAE1611 PAE2446
  Sso:  SSO0473 SSO0959 SSO1879
  Ape:  APE1073
  Sce:  YDR332w YIL143c
  Spo:  SPAC17A5.06 SPBC3B8.12
  Ecu:  ECU01g1060
  Fnu:  FN0448 FN1974_2
  Dra:  DRA0131_1
  Cac:  CAC2824_2
  Cgl:  Cgl0793 Cgl1126_2 Cgl1533_2 Cgl1868
  Mtu:  Rv0861c Rv1179c_1 Rv2917
  MtC:  MT0884 MT1217 MT2985
  Mle:  ML1624 ML2157
  Spy:  SPy0669
  Spn:  SP0575
  Sau:  SA2276 SA2277_2
  Lin:  lin2589
  Nos:  all2951 all8075 alr4703 alr4909 alr7157
  Eco:  yejH_1
  EcZ:  Z1129_2 Z1568_2 ZyejH_1
  Ecs:  ECs1305_2 ECs3076_1
  Ype:  YPMT1.30 YPO1265_1
  Sty:  STM0900 STM2223_1
  Vch:  VC0812_2 VC1636_1
  Tpa:  TP0380
_______

[C] COG1062 Zn-dependent alcohol dehydrogenases, class III
  Sso:  SSO0472
  Sce:  YDL168w
  Spo:  SPBC1539.07c SPCC13B11.04c
  Cgl:  Cgl0319 Cgl2417_1
  Mtu:  Rv0162c Rv0761c Rv2259 Rv3086
  MtC:  MT0171 MT0786 MT2320 MT3171
  Mle:  ML1784
  Bha:  BH2011
  Syn:  sll0990
  Nos:  all2810
  Eco:  adhC
  EcZ:  ZadhC
  Ecs:  ECs0411
  Ype:  YPO1502
  Sty:  STM1627
  Pae:  PA3629
  Hin:  HI0185
  Nme:  NMB1304
  NmA:  NMA1518
  Rso:  RSc0605 RSp0069
  Atu:  AGc3072 AGl1150 AGpA280
  Sme:  SMa2113 SMb20170 SMc01270 SMc03929
  Bme:  BMEI1819 BMEII0867
  Mlo:  mlr0872
  Ccr:  CC2396 CC2516 CC3029
_______

[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
  Afu:  AF2101
  Hbs:  VNG0446G VNG1023C VNG2617G
  Mac:  MA0417 MA1901
  Tac:  Ta0749 Ta0897
  Tvo:  TVN0448_1 TVN1019
  Pho:  PH0655
  Pab:  PAB2382
  Sso:  SSO2717 SSO3003 SSO3042 SSO3204 SSO3237
  Ape:  APE1245
  Sce:  YAL060w YAL061w YDL246c YJR159w YLR070c
  Spo:  SPBC1198.01 SPBC1773.05c
  Tma:  TM0298 TM0412 TM0436
  Dra:  DR1662 DR2279 DRA0005
  Cac:  CAC3375
  Mtu:  Rv1530 Rv1895 Rv3726
  MtC:  MT1581 MT1946 MT3829
  Lla:  L117145 L190278
  Spy:  SPy1111
  Spn:  SP1270 SP1855 SP2055
  Sau:  SA0239 SA0240 SA0242 SA0246
  Lin:  lin0506 lin1072 lin2812 lin2813 lin2969
  Bsu:  BS_adhB BS_gutB BS_tdh BS_ydjL BS_yjmD BS_yycR
  Bha:  BH0187 BH0189 BH1829 BH1951 BH3949
  Nos:  all4458 all5334 alr0895 alr0897 alr2335 alr5117
  Eco:  gatD idnD rspB tdh ybdR ycjQ ydjJ
        ydjL yggP yggQ yjjN yphC
  EcZ:  Z2815 Z4276 Z5613 ZgatD Ztdh ZybdR ZycjQ
        ZydjJ ZyjjN ZyphCm
  Ecs:  ECs0647 ECs1892 ECs2483 ECs2485 ECs2894 ECs3411 ECs3807
        ECs4494 ECs4941 ECs5318
  Ype:  YPO0060 YPO2502 YPO3352
  Sty:  STM0615 STM1506 STM1542 STM3082 STM3261 STM3708 STM4484
  Vch:  VCA0885
  Pae:  PA2119 PA2158 PA2188 PA4097 PA4153 PA5421
  Hin:  HI0053
  Xfa:  XF1727
  Nme:  NMB0604 NMB1395
  NmA:  NMA0808 NMA1612 NMA1613
  Rso:  RSc0194 RSc0624 RSp0053 RSp0948 RSp1011_1
  Atu:  AGc2601 AGc2885 AGc5103 AGl1091 AGl1538 AGl281 AGl3122
        AGl3295
  Sme:  SMa0400 SMa0512 SMa1156 SMa1417 SMa1430 SMb20080 SMb20246
        SMb20445 SMb20853 SMc01214 SMc01564 SMc01992 SMc02771
  Mlo:  mll5168 mlr3340 mlr4915 mlr7108 mlr8299
  Ccr:  CC2837
  Mpn:  MPN564
_______

[R] COG1064 Zn-dependent alcohol dehydrogenases
  Mac:  MA0403
  Tac:  Ta0841
  Tvo:  TVN0944
  Pya:  PAE1921 PAE2051 PAE2332 PAE2931
  Sso:  SSO0764 SSO1220 SSO1300 SSO1646 SSO2441 SSO2494 SSO2501
        SSO2536 SSO2878
  Ape:  APE1557 APE2239
  Sce:  YBR145w YCR105w YMR083w YMR303c YMR318c YOL086c
  Spo:  SPCC13B11.01
  Cgl:  Cgl0223 Cgl0330 Cgl2747
  Mtu:  Rv1862 Rv3045
  MtC:  MT1911 MT3130
  Mle:  ML1730 ML2053
  Lla:  L55758
  Spy:  SPy0044
  Spn:  SP0285
  Sau:  SA0562
  Bsu:  BS_adhA
  Bha:  BH0538
  Syn:  slr1192
  Nos:  all0879
  Eco:  adhP yahK yjgB
  EcZ:  ZadhP ZyahK ZyjgB
  Ecs:  ECs0379 ECs2082 ECs5241
  Sty:  STM1567 STM4486
  Pae:  PA2275 PA5427
  Xfa:  XF1136 XF1734 XF1746 XF2389
  Nme:  NMB0546
  NmA:  NMA0725
  Rso:  RSc0180 RSc0181 RSc0632 RSc1505 RSc3130 RSp0430 RSp1124
  Hpy:  HP1104
  jHp:  jhp1030 jhp1429
  Cje:  Cj1548c
  Atu:  AGc1112 AGc2867 AGc3663A AGc3897 AGpA339
  Sme:  SMa1296 SMc00105 SMc00680
  Bme:  BMEI0925 BMEI1746
  Mlo:  mlr1136
_______

[O] COG1066 Predicted ATP-dependent serine protease
  Aae:  aq_1773 aq_552
  Tma:  TM0199
  Fnu:  FN0157
  Dra:  DR1105
  Cac:  CAC3188
  Cgl:  Cgl2612
  Mtu:  Rv3585
  MtC:  MT3691
  Lla:  L0303
  Spy:  SPy0236
  Sau:  SA0484
  Lin:  lin0265
  Bsu:  BS_sms
  Bha:  BH0104
  Syn:  slr0448
  Nos:  alr3823
  Eco:  sms
  EcZ:  Zsms
  Ecs:  ECs5347
  Ype:  YPO0443
  Sty:  STM4579
  Vch:  VC2343
  Pae:  PA4609
  Hin:  HI1597
  Pmu:  PM0252
  Xfa:  XF1378
  Nme:  NMB0782
  NmA:  NMA0992
  Rso:  RSc1372
  Hpy:  HP0223
  jHp:  jhp0209
  Cje:  Cj1205c
  Atu:  AGc1991
  Sme:  SMc00556
  Bme:  BMEI1486
  Mlo:  mll7835
  Ccr:  CC1660
  Rpr:  RP546
  Rco:  RC0810
  Ctr:  CT298
  Cpn:  CPn0053
  Tpa:  TP1022
_______

[O] COG1067 Predicted ATP-dependent protease
  Afu:  AF0364
  Hbs:  VNG0303G
  Mac:  MA3289
  Mth:  MTH785 MTH892
  Mja:  MJ1417
  Mka:  MK0616
  Tac:  Ta0098 Ta1081
  Tvo:  TVN0155 TVN0494
  Pho:  PH0452_1 PH0452_3
  Pab:  PAB1313_1 PAB1313_3
  Tma:  TM1869
  Cac:  CAC2135 CAC2638 CAC3716
  Bsu:  BS_lonB
  Bha:  BH3051
  Eco:  ycbZ
  EcZ:  Z1305
  Ecs:  ECs1039
  Ype:  YPO1431
  Sty:  STM1068
  Vch:  VC1482 VCA0975
  Pae:  PA4576
  Hin:  HI1324
  Pmu:  PM0483
  Tpa:  TP0016
_______

[C] COG1069 Ribulose kinase
  Sce:  YDR109c YNL249c
  Sau:  SA0510
  Bsu:  BS_araB
  Bha:  BH1872
  Eco:  araB
  EcZ:  ZaraB
  Ecs:  ECs0067
  Ype:  YPO2254 YPO3637
  Sty:  STM0103
  Atu:  AGl1075 AGl826
  Sme:  SMb20852 SMc01503
  Bme:  BMEII0979
  Mlo:  mll4918
_______

[G] COG1070 Sugar (pentulose and hexulose) kinases
  Afu:  AF1324 AF1752
  Ape:  APE0017
  Sce:  YGR194c
  Spo:  SPCPJ732.02c
  Tma:  TM0116 TM0284 TM0443 TM1073
  Cac:  CAC1344 CAC2612
  Cgl:  Cgl0113 Cgl2951
  Mtu:  Rv0729
  MtC:  MT0754
  Lla:  L0231 L52019
  Spn:  SP2167
  Sau:  SA2294
  Lin:  lin2860 lin2981
  Bsu:  BS_gntK BS_xylB BS_yoaC BS_yulC
  Bha:  BH1551 BH2676 BH2756
  Syn:  slr1420
  Nos:  all4656
  Eco:  fucK lyxK rhaB xylB ydeV ygcE
  EcZ:  Z4878 ZfucK ZrhaB ZxylB ZydeV ZygcE
  Ecs:  ECs2118 ECs3632 ECs3663 ECs4353 ECs4447 ECs4831
  Ype:  YPO0330 YPO0415 YPO1291 YPO3334 YPO4039
  Sty:  STM2977 STM3660 STM3674 STM3781 STM4047 STM4072
  Pae:  PA2343 PA3024
  Hin:  HI0613 HI1027 HI1113
  Pmu:  PM1247 PM1272 PM1371
  Rso:  RSc2128
  Atu:  AGl1942 AGl2672 AGl776
  Sme:  SMb20489 SMb20497 SMb21022 SMc01618 SMc01623 SMc02334 SMc02335
        SMc02341 SMc03003 SMc03164
  Bme:  BMEI1386 BMEII0430
  Mlo:  mll3599 mll5701 mlr3603 mlr5033 mlr7268
  Tpa:  TP0295
  Bbu:  BB0545
_______

[C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
  Hbs:  VNG1926G VNG2217G
  Tac:  Ta1438
  Tvo:  TVN0102
  Pya:  PAE2644
  Sso:  SSO1369 SSO1525
  Ape:  APE1677
  Sce:  YER178w
  Spo:  SPAC26F1.03
  Ecu:  ECU09g1040
  Dra:  DR0029
  Mtu:  Rv0843 Rv2497c
  MtC:  MT0865 MT2572
  Lla:  L0033
  Spy:  SPy1026
  Spn:  SP1164
  Sau:  SA1348
  Lin:  lin1044 lin1409
  Bsu:  BS_acoA BS_bfmBAA BS_pdhA
  Bha:  BH0213 BH0776 BH1822 BH2655 BH2763
  Syn:  slr1934
  Nos:  alr2708
  Pae:  PA2247 PA3417 PA4150
  Rso:  RSc1797
  Atu:  AGc2636 AGl2716
  Sme:  SMb20020_1 SMc01030 SMc03201
  Bme:  BMEI0854 BMEII0061_1 BMEII0216_1 BMEII0748
  Mlo:  mll3629 mll4473 mlr0383
  Ccr:  CC1726
  Rpr:  RP261
  Rco:  RC0347
  Ctr:  CT245 CT340_1
  Cpn:  CPn0033_1 CPn0304
  Mpu:  MYPU_7640
  Mpn:  MPN393
  Mge:  MG274
_______

[H] COG1072 Panthothenate kinase
  Tvo:  TVN0137_2
  Sce:  YFR007w
  Spo:  SPAC227.14
  Cgl:  Cgl0968
  Mtu:  Rv1092c
  MtC:  MT1124
  Mle:  ML1954
  Lla:  L66222
  Spy:  SPy1233
  Spn:  SP0839
  Lin:  lin0923
  Bsu:  BS_yqjS
  Bha:  BH2875
  Eco:  coaA yggC
  EcZ:  Z4273 ZcoaA
  Ecs:  ECs3804 ECs4901
  Ype:  YPO3758
  Sty:  STM4139
  Vch:  VC0320
  Hin:  HI0631
  Pmu:  PM1747
  Atu:  AGc100 AGc59 AGl262
  Sme:  SMc02167 SMc02567
  Bme:  BMEI1883 BMEI2039
  Mlo:  mll4957 mlr5019
_______

[R] COG1073 Hydrolases of the alpha/beta superfamily
  Afu:  AF0675 AF1563
  Hbs:  VNG1418C
  Mac:  MA0077 MA0419 MA2933 MA3920
  Pab:  PAB2176
  Ape:  APE1244_1
  Sce:  YNL320w
  Spo:  SPBC32H8.03
  Ecu:  ECU09g0730
  Tma:  TM0336
  Fnu:  FN0852
  Dra:  DR1053 DR1064 DR1915 DR1931 DR2248 DR2478 DR2551
        DRB0023
  Cac:  CAC2725 CAC3022 CAC3407 CAC3665
  Cgl:  Cgl1404_1
  Mtu:  Rv2307c
  MtC:  MT2364
  Lla:  L123536 L15267
  Spy:  SPy1892
  Lin:  lin1094 lin2180 lin2363
  Bsu:  BS_yitV BS_yqkD BS_ytaP
  Bha:  BH1308 BH2917
  Nos:  all8511
  Eco:  yafA ycjY yfhR yjfP
  EcZ:  Z0347 Z0370 Z2442 Z2444 Z2445 Z3802 ZyafA
        ZyjfP
  Ecs:  ECs0266 ECs0310 ECs0332 ECs1907 ECs1908 ECs1909 ECs3400
        ECs5166
  Ype:  YPO2002 YPO3224
  Sty:  STM0318 STM2547 STM4380
  Vch:  VC2276 VCA0863_2
  Pae:  PA1680 PA2168 PA2218 PA3695 PA3829
  Pmu:  PM1361
  Xfa:  XF1745 XF1750
  Rso:  RSc0206 RSc1887_1
  Atu:  AGl2362
  Sme:  SMa0171 SMa1898_1
  Bme:  BMEI1884
  Mlo:  mlr4383 mlr6657
  Ccr:  CC0882
  Ctr:  CT149 CT206
  Cpn:  CPn0152 CPn0161
_______

[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
  Fnu:  FN1149
  Cac:  CAC2262
  Mtu:  Rv0630c
  MtC:  MT0658
  Lla:  L0251
  Spy:  SPy0777
  Spn:  SP1152
  Sau:  SA0828
  Lin:  lin2368
  Bsu:  BS_addA
  Bha:  BH2980
  Eco:  recB
  EcZ:  ZrecB
  Ecs:  ECs3677
  Ype:  YPO1020
  Sty:  STM2994
  Buc:  BU454
  Vch:  VC2320
  Pae:  PA4284
  Hin:  HI1321
  Pmu:  PM0516
  Xfa:  XF0423
  Nme:  NMB0785
  NmA:  NMA0995
  Rso:  RSc1190
  Hpy:  HP1553
  jHp:  jhp1446
  Cje:  Cj1481c
  Atu:  AGc39
  Sme:  SMc02760
  Bme:  BMEI2023
  Mlo:  mll5083
  Ccr:  CC3538
  Rpr:  RP734
  Rco:  RC1114
  Ctr:  CT639
  Cpn:  CPn0738
  Tpa:  TP0898
  Bbu:  BB0633
_______

[R] COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
  Afu:  AF1763_1
  Sce:  YBR204c YDR058c
  Spo:  SPBC530.12c_1
  Dra:  DR0334 DR2078
  Cac:  CAC1028
  Cgl:  Cgl0080 Cgl0081
  Sau:  SA0309_2 SA2463_2
  Bsu:  BS_lipA BS_lipB
  Bha:  BH1896
  Syn:  sll1969
  Nos:  all0254 alr1352
  Vch:  VCA0092 VCA0221
  Pae:  PA2862 PA4813
  Xfa:  XF1181
  Rso:  RSc2082
  Mpu:  MYPU_6950
_______

[O] COG1076 DnaJ-domain-containing proteins 1
  Sce:  YGL018c
  Spo:  SPAC144.08
  Ecu:  ECU02g0690
  Syn:  sll0909
  Eco:  djlA hscB
  EcZ:  ZyabH ZyfhE
  Ecs:  ECs0060 ECs3393
  Ype:  YPO0496 YPO2893 YPO3641
  Sty:  STM0094 STM0567 STM2540
  Buc:  BU604
  Vch:  VC0447 VC0751
  Pae:  PA0598 PA3811
  Hin:  HI0271 HI0375
  Pmu:  PM0321 PM1878
  Nme:  NMB1383
  NmA:  NMA1598
  Rso:  RSc1023
  Cje:  Cj0954c
  Atu:  AGc3834
  Sme:  SMc01853
  Bme:  BMEI0564
  Mlo:  mll1571 mll4676
  Ccr:  CC2134
  Rpr:  RP201
  Rco:  RC0263
_______

[D] COG1077 Actin-like ATPase involved in cell morphogenesis
  Afu:  AF2021
  Mth:  MTH1024
  Mka:  MK0168
  Tac:  Ta0583
  Tvo:  TVN0641
  Aae:  aq_845
  Tma:  TM0588 TM1544
  Fnu:  FN0758 FN1577
  Cac:  CAC1242 CAC2858
  Lin:  lin1583 lin1825 lin2669
  Bsu:  BS_mbl BS_mreB BS_mreBH
  Bha:  BH0843 BH3031 BH3739
  Nos:  all0087
  Eco:  mreB
  EcZ:  ZmreB
  Ecs:  ECs4123
  Ype:  YPO3665
  Sty:  STM3374
  Vch:  VC0415
  Pae:  PA4481
  Hin:  HI0037
  Pmu:  PM1955
  Xfa:  XF1309
  Rso:  RSc0059
  Hpy:  HP1373
  jHp:  jhp1287
  Cje:  Cj0276
  Ccr:  CC1543
  Rpr:  RP768
  Rco:  RC1198
  Ctr:  CT709
  Cpn:  CPn0850
  Tpa:  TP0497
  Bbu:  BB0715
_______

[R] COG1078 HD superfamily phosphohydrolases
  Afu:  AF1423
  Hbs:  VNG0189C VNG1537C VNG2502C
  Mac:  MA0713
  Mth:  MTH148
  Mja:  MJ1154
  Mka:  MK0194
  Tac:  Ta0193m
  Tvo:  TVN1403
  Pho:  PH1782
  Pab:  PAB2116
  Pya:  PAE0632
  Sso:  SSO0095 SSO1824 SSO3125
  Ape:  APE1281
  Ecu:  ECU03g0100
  Aae:  aq_1910
  Tma:  TM1547
  Fnu:  FN2068
  Lla:  L87113
  Spy:  SPy0621
  Spn:  SP1290
  Sau:  SA0560
  Lin:  lin2710
  Bsu:  BS_ydhJ BS_ywfO
  Bha:  BH0646 BH1811 BH3818
  Uur:  UU598
  Mpn:  MPN677
  Mge:  MG461
_______

[R] COG1079 Uncharacterized ABC-type transport system, permease component
  Afu:  AF0889
  Hbs:  VNG0897G
  Pho:  PH1711
  Pab:  PAB0305
  Pya:  PAE3118 PAE3411
  Ape:  APE0067 APE2586
  Tma:  TM0105
  Dra:  DR0251
  Cac:  CAC0705
  Lla:  L167877
  Spy:  SPy1225
  Spn:  SP0848
  Lin:  lin1428
  Bsu:  BS_yufQ
  Nos:  alr5368
  Pae:  PA0138
  Rso:  RSc2175
  Atu:  AGc207 AGc3294
  Sme:  SMa1514 SMa2123 SMa2369 SMb20125 SMc00244 SMc04125
  Bme:  BMEII0087 BMEII0701
  Mlo:  mll0502 mll4174 mlr3157 mlr6804 mlr7063
  Tpa:  TP0302 TP0323
  Bbu:  BB0316 BB0679
  Uur:  UU013
  Mpu:  MYPU_6170
  Mpn:  MPN260
  Mge:  MG121
_______

[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
  Fnu:  FN1793
  Dra:  DRB0075_3
  Cac:  CAC3087
  Cgl:  Cgl1887
  Lla:  L120628
  Spy:  SPy1372
  Spn:  SP1176
  Sau:  SA0935
  Lin:  lin1002
  Bsu:  BS_ptsI
  Bha:  BH3073
  Eco:  ptsA_1 ptsI ycgC_3 ypdD_2
  EcZ:  Z3648_2 ZptsA_1 ZptsI ZycgC_3
  Ecs:  ECs1703_3 ECs3263_2 ECs3288 ECs4877_1
  Ype:  YPO0405_2 YPO2994
  Sty:  STM2432 STM4110_2
  Buc:  BU064
  Vch:  VC0965
  Pae:  PA3562_3 PA3760_3
  Hin:  HI1712
  Pmu:  PM0897
  Xfa:  XF1402
  Nme:  NMB2044
  NmA:  NMA0392
  Rso:  RSc0348 RSc2861_3 RSp1282_3
  Mlo:  mll3609 mll5291
  Ccr:  CC0448_3 CC0537_3
  Ctr:  CT336
  Cpn:  CPn0038
  Bbu:  BB0558
  Mpu:  MYPU_6020
  Mpn:  MPN627
  Mge:  MG429
_______

[G] COG1082 Sugar phosphate isomerases/epimerases
  Afu:  AF1279 AF2428
  Mac:  MA0277 MA4658
  Mth:  MTH1489 MTH247
  Mja:  MJ0008 MJ1188 MJ1311 MJ1614
  Mka:  MK1021
  Pho:  PH1474
  Pab:  PAB0472 PAB0696 PAB0697
  Sso:  SSO3029 SSO3050
  Tma:  TM0416 TM0422 TM0789
  Cac:  CAC2642 CAC3499
  Cgl:  Cgl0163 Cgl0165 Cgl0172 Cgl0417_1 Cgl2502 Cgl2582 Cgl3001
  Mtu:  Rv0498
  MtC:  MT0518
  Mle:  ML2432
  Spy:  SPy0535
  Sau:  SA0212
  Lin:  lin2263 lin2265 lin2336 lin2968
  Bsu:  BS_iolE BS_iolH BS_iolI BS_yfiH
  Bha:  BH1249 BH2310 BH2315 BH2317 BH3346
  Syn:  sll1304 slr2110
  Nos:  alr1580 alr1583
  Eco:  ycjR yhfO yhfP
  EcZ:  Z2469 Z4733
  Ecs:  ECs1893 ECs4223
  Ype:  YPO2586 YPO3617
  Sty:  STM4424 STM4427 STM4436
  Pae:  PA0238 PA0242_1
  Rso:  RSc1238 RSc1244 RSc1247 RSp1400_1
  Atu:  AGl1007 AGl177GM AGl2530 AGl260 AGl2948 AGl3161 AGl3383
        AGl630 AGl678_1 AGl941GM AGl982 AGl986 AGpA635 AGpA639
        AGpT34
  Sme:  SMa1353 SMa1354 SMa1394 SMb20488 SMb20581_1 SMb21596 SMc00433
        SMc03130 SMc03162 SMc03811 SMc04130 SMc04254
  Bme:  BMEI1389 BMEII0570
  Mlo:  mll1509 mll1734 mll3313 mll3360 mll3362 mll3595 mll4979
        mll6643 mlr1006 mlr1887 mlr2437 mlr3364 mlr7228 mlr7231
  Ccr:  CC1300 CC1629 CC1631
_______

[M] COG1083 CMP-N-acetylneuraminic acid synthetase
  Mac:  MA3766_1
  Syn:  slr2122
  Hin:  HI1279
  Pmu:  PM0187
  Nme:  NMB0069
  Hpy:  HP0326_1
  Cje:  Cj1143_2 Cj1311 Cj1331
_______

[R] COG1084 Predicted GTPase
  Afu:  AF0428
  Hbs:  VNG2595G
  Mac:  MA1390
  Mth:  MTH858
  Mja:  MJ1408
  Mka:  MK0003
  Tac:  Ta0941
  Tvo:  TVN1085
  Pho:  PH1320
  Pab:  PAB0558
  Pya:  PAE3626
  Sso:  SSO0625
  Ape:  APE0510
  Sce:  YPL093w
  Spo:  SPBC651.01c
  Ecu:  ECU05g0800
_______

[C] COG1085 Galactose-1-phosphate uridylyltransferase
  Afu:  AF1331
  Mac:  MA3680
  Pho:  PH0365
  Pya:  PAE1184
  Sce:  YBR018c
  Spo:  SPBPB2B2.10c
  Tma:  TM0896 TM1191
  Cac:  CAC2844
  Cgl:  Cgl2030
  Mtu:  Rv0618 Rv0619
  Lla:  L51063
  Eco:  galT
  EcZ:  ZgalT
  Ecs:  ECs0786
  Ype:  YPO1138
  Sty:  STM0775
  Vch:  VC1596
  Hin:  HI0820
  Pmu:  PM1036
_______

[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases
  Mja:  MJ1061
  Tma:  TM1548
  Fnu:  FN1689 FN1696
  Cac:  CAC2194
  Cgl:  Cgl0346
  Spn:  SP0103 SP0358
  Sau:  SA0147 SA0148
  Bsu:  BS_yodU BS_ypqP BS_yveM
  Bha:  BH3718
  Vch:  VC0260
  Pae:  PA3141
  Pmu:  PM1007 PM1015
  Xfa:  XF2433
  Nme:  NMB1822
  NmA:  NMA0637
  Rso:  RSp1004
  Hpy:  HP0840
  jHp:  jhp0778
  Cje:  Cj1120c Cj1293
  Sme:  SMb21232
  Bme:  BMEI1427
  Mlo:  mlr7568
  Ccr:  CC0233 CC3210
  Rpr:  RP333
  Rco:  RC0457
  Tpa:  TP0077
_______

[M] COG1087 UDP-glucose 4-epimerase
  Mth:  MTH631
  Sce:  YBR019c_1
  Spo:  SPBC365.14c SPBPB2B2.12c_1
  Aae:  aq_1069
  Fnu:  FN0378 FN2109
  Dra:  DR2202
  Cac:  CAC1429 CAC2960
  Cgl:  Cgl1875
  Lla:  L0024
  Spn:  SP1607 SP1828 SP1867
  Lin:  lin2620
  Bsu:  BS_galE
  Bha:  BH1108
  Syn:  sll0244 slr1067 slr1078
  Nos:  all2853 all4713
  Eco:  galE
  EcZ:  ZgalE
  Ecs:  ECs0787
  Ype:  YPO1139
  Sty:  STM0776
  Vch:  VCA0774
  Pae:  PA1384
  Hin:  HI0351
  Pmu:  PM0286
  Nme:  NMB0064 NMB0078
  NmA:  NMA0190 NMA0203
  Rso:  RSp1101
  Hpy:  HP0360
  jHp:  jhp1020
  Cje:  Cj1131c
  Atu:  AGc938 AGl1374 AGl3011
  Sme:  SMb20459 SMb20942 SMc02252
  Bme:  BMEI0921 BMEII0730
  Mlo:  mll7878 mlr5697
  Ccr:  CC0092 CC2383
  Mpn:  MPN257
  Mge:  MG118
_______

[M] COG1088 dTDP-D-glucose 4,6-dehydratase
  Afu:  AF0324
  Mac:  MA2186 MA3779
  Mth:  MTH1789
  Tvo:  TVN0902
  Pho:  PH0414
  Pab:  PAB0785
  Sso:  SSO0830 SSO1734 SSO1781
  Ape:  APE1180
  Spo:  SPBPB2B2.11
  Fnu:  FN1667
  Dra:  DRA0041
  Cac:  CAC2332
  Cgl:  Cgl0333
  Mtu:  Rv3464
  MtC:  MT3570
  Mle:  ML1964
  Lla:  L199221
  Spy:  SPy0936
  Bsu:  BS_spsJ
  Bha:  BH3364
  Syn:  slr0836
  Nos:  alr0038
  Eco:  rfbB rffG
  EcZ:  ZrffG
  Ecs:  ECs4721
  Ype:  YPO3862
  Sty:  STM2097 STM3922
  Pae:  PA5161
  Hin:  HI0873
  Pmu:  PM1030
  Xfa:  XF0255
  Nme:  NMB0063 NMB0079
  NmA:  NMA0189 NMA0204
  Rso:  RSc0682
  Atu:  AGl530
  Sme:  SMb21326
  Mlo:  mlr7552
  Ccr:  CC3629
_______

[M] COG1089 GDP-D-mannose dehydratase
  Afu:  AF0044m
  Mac:  MA1173 MA1174
  Mth:  MTH333
  Aae:  aq_1082
  Cac:  CAC2180
  Mtu:  Rv1511
  MtC:  MT1561
  Syn:  sll1212 slr1072
  Nos:  all4828 alr3424
  Eco:  gmd
  EcZ:  Z3198 Zgmd
  Ecs:  ECs2839 ECs2858
  Sty:  STM2109
  Vch:  VC0243
  Pae:  PA5453
  Xfa:  XF0609
  Hpy:  HP0044
  jHp:  jhp0038
  Atu:  AGl187
  Bme:  BMEI1413 BMEII0848
  Mlo:  mll5922 mlr5849
  Ccr:  CC1010
_______

[R] COG1090 Predicted nucleoside-diphosphate sugar epimerase
  Tac:  Ta1272
  Tvo:  TVN0505
  Cgl:  Cgl1576_2
  Mtu:  Rv2216
  MtC:  MT2273
  Mle:  ML0860
  Sau:  SA0724
  Lin:  lin1802
  Bsu:  BS_yfhF
  Bha:  BH3889
  Syn:  slr1223
  Nos:  all2390
  Eco:  yfcH
  EcZ:  Z3566
  Ecs:  ECs3188
  Ype:  YPO2778
  Sty:  STM2350
  Pae:  PA4656
  Hin:  HI1208
  Pmu:  PM0548
  Xfa:  XF0286
_______

[M] COG1091 dTDP-4-dehydrorhamnose reductase
  Afu:  AF0323a
  Hbs:  VNG1666H
  Mac:  MA3778
  Mth:  MTH1792
  Tvo:  TVN0900
  Pho:  PH0417
  Pab:  PAB0789
  Sso:  SSO0832 SSO1783 SSO2161
  Ape:  APE1179
  Aae:  aq_518
  Fnu:  FN1685 FN1698
  Dra:  DRA0044
  Cac:  CAC2315 CAP0122
  Cgl:  Cgl0332_2
  Mtu:  Rv3266c
  MtC:  MT3366
  Mle:  ML0751
  Lla:  L320
  Spy:  SPy0784
  Bsu:  BS_spsK_1
  Bha:  BH3365
  Syn:  sll1395
  Nos:  alr3336 alr4490
  Eco:  rfbD
  Sty:  STM2096
  Pae:  PA4069 PA5162
  Xfa:  XF0258
  Nme:  NMB0756
  NmA:  NMA0967
  Rso:  RSc0683 RSc3152
  Atu:  AGl531
  Sme:  SMb21327
  Mlo:  mlr7553
  Ccr:  CC1140 CC3615
  Rpr:  RP332
  Rco:  RC0456
_______

[R] COG1092 Predicted SAM-dependent methyltransferases
  Mja:  MJ1649 MJ1653
  Mka:  MK1067
  Pho:  PH1915
  Pab:  PAB1237
  Ape:  APE0141
  Aae:  aq_2071 aq_533
  Tma:  TM1697
  Fnu:  FN1033
  Dra:  DR0049 DR1694 DR1834
  Lla:  L52686
  Spy:  SPy0808
  Spn:  SP1378
  Sau:  SA0932
  Lin:  lin0590
  Bsu:  BS_ywbD
  Eco:  ycbY_2 yccW
  EcZ:  Z1319 ZycbY_2
  Ecs:  ECs1032_2 ECs1051
  Ype:  YPO1418_2 YPO1445
  Sty:  STM1061_2 STM1080
  Buc:  BU363_2
  Vch:  VC1354 VC1488_2
  Pae:  PA0354 PA1407 PA3048_2
  Hin:  HI0116_2
  Pmu:  PM0304_2
  Xfa:  XF0407 XF2651_2
  Nme:  NMB1367
  NmA:  NMA1579
  Rso:  RSc0051
  Atu:  AGc592
  Sme:  SMc01131
  Bme:  BMEI1797
  Mlo:  mlr3209
  Ctr:  CT404
  Cpn:  CPn0531
_______

[J] COG1093 Translation initiation factor 2, alpha subunit (eIF-2alpha)
  Afu:  AF0527
  Hbs:  VNG0549G
  Mac:  MA0644
  Mth:  MTH1308
  Mja:  MJ0117
  Mka:  MK0419
  Tac:  Ta1203
  Tvo:  TVN0412
  Pho:  PH0961
  Pab:  PAB0568
  Pya:  PAE3032
  Sso:  SSO1050
  Ape:  APE0436
  Sce:  YJR007w
  Spo:  SPAC3G9.09c
  Ecu:  ECU11g0930i
_______

[R] COG1094 Predicted RNA-binding protein (contains KH domains)
  Afu:  AF1805
  Hbs:  VNG2227C
  Mac:  MA0893
  Mth:  MTH1006
  Mja:  MJ0443
  Mka:  MK0513
  Tac:  Ta0397
  Tvo:  TVN1176
  Pho:  PH1566
  Pab:  PAB0406
  Pya:  PAE3473
  Sso:  SSO2373
  Ape:  APE0754
  Sce:  YCL059c YOR145c
  Spo:  SPAC2C4.11c SPBC25B2.05
  Ecu:  ECU04g0510 ECU11g0750
_______

[K] COG1095 DNA-directed RNA polymerase, subunit E'
  Afu:  AF1117
  Hbs:  VNG2053G
  Mac:  MA3692
  Mth:  MTH264
  Mja:  MJ0397
  Mka:  MK1451
  Tac:  Ta1089m
  Tvo:  TVN0486
  Pho:  PH1908
  Pab:  PAB1105
  Pya:  PAE3562
  Sso:  SSO0415
  Ape:  APE0257
  Sce:  YDR404c YKL144c
  Spo:  SPACUNK4.06c SPBC2G5.07c
  Ecu:  ECU07g1750 ECU08g0650
_______

[J] COG1096 Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
  Afu:  AF0206
  Mac:  MA0720
  Mth:  MTH1318
  Mka:  MK0060
  Tac:  Ta0929
  Tvo:  TVN1077
  Pho:  PH0043
  Pab:  PAB2314
  Pya:  PAE1975
  Sso:  SSO0292
  Ape:  APE0445
  Sce:  YNL232w
  Spo:  SPCC1840.11
_______

[J] COG1097 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain)
  Afu:  AF0492
  Mac:  MA1777
  Mth:  MTH684
  Mka:  MK0382
  Tac:  Ta1292
  Tvo:  TVN0306
  Pho:  PH1551
  Pab:  PAB0419
  Pya:  PAE2208
  Sso:  SSO0736
  Ape:  APE1448
  Sce:  YHR069c YOL142w
  Spo:  SPAC22A12.12c SPAC2F7.14c
  Ecu:  ECU09g1240 ECU10g1340
_______

[J] COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain)
  Tma:  TM1685
  Dra:  DR1754
  Cac:  CAC3206
  Lla:  L114402
  Spy:  SPy1619
  Spn:  SP1537
  Sau:  SA0466 SA0816
  Lin:  lin0250 lin2468
  Bsu:  BS_yabR BS_yugI
  Bha:  BH0077 BH3347
_______

[R] COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold
  Afu:  AF1765
  Mth:  MTH1842
  Mja:  MJ0761 MJ1383
  Mka:  MK0232 MK0533
  Nos:  all0420
_______

[R] COG1100 GTPase SAR1 and related small G proteins
  Afu:  AF0539 AF1181 AF2209
  Hbs:  VNG2410G
  Mac:  MA1381 MA2301_2
  Mth:  MTH1903
  Mja:  MJ0920
  Mka:  MK0036 MK0164
  Tac:  Ta0037 Ta1192
  Tvo:  TVN0036 TVN0401
  Pho:  PH0344 PH0611
  Pab:  PAB0955 PAB1065
  Pya:  PAE3333
  Sso:  SSO1046
  Ape:  APE0791
  Sce:  YAL048c YBR164c YBR264c YCR027c YDL137w YDL192w YER031c
        YFL005w YFL038c YGL210w YGR152c YHR022c YIL118w YJR072c
        YKR014c YKR055w YLR229c YLR243w YLR262c YLR293c YML001w
        YML064c YMR138w YNL090w YNL093w YNL098c YNL180c YNL304w
        YOR089c YOR094w YOR101w YOR185c YOR262w YPL051w YPL218w
        YPR165w
  Spo:  SPAC110.03 SPAC144.07c SPAC1565.06c SPAC16.01 SPAC16A10.04 SPAC17H9.09c SPAC18G6.03
        SPAC1B3.11c SPAC1F7.04 SPAC20H4.11c SPAC22F3.05c SPAC23C4.08 SPAC4C5.02c SPAC4D7.12c
        SPAC6F6.15 SPAC9E9.07c SPAPB1A10.10c SPBC119.15 SPBC1289.03c SPBC1539.08 SPBC1703.10
        SPBC31F10.06c SPBC405.04c SPBC428.16c SPBC4F6.18c SPCC320.04c
  Ecu:  ECU02g0410 ECU02g1430 ECU03g0470 ECU03g1430 ECU03g1560 ECU04g0680 ECU04g1560
        ECU05g0090 ECU05g1000 ECU06g1300 ECU07g0540 ECU08g0730 ECU08g1930 ECU09g0170
        ECU09g1450 ECU10g0090 ECU10g0350
  Aae:  aq_1560 aq_1823
  Dra:  DR0853
  Syn:  sll0503 sll0804 slr1306 slr1462
  Nos:  all3030 all3787 all4384 alr0124_2 alr0904 alr4172
  Mlo:  mll3243
_______

[R] COG1101 ABC-type uncharacterized transport system, ATPase component
  Fnu:  FN2079
  Cgl:  Cgl2196
  Spy:  SPy1019
  Spn:  SP1071
  Vch:  VC1103
  Pae:  PA3838
  Rso:  RSc1738
  Atu:  AGc4841
  Sme:  SMc03828
  Bme:  BMEI0012
  Mlo:  mll0623
  Rpr:  RP369
  Rco:  RC0500
_______

[F] COG1102 Cytidylate kinase
  Afu:  AF1900
  Hbs:  VNG1727G
  Mac:  MA1104
  Mth:  MTH30
  Mja:  MJ0656
  Mka:  MK0022
  Tac:  Ta1245
  Tvo:  TVN0351
  Pho:  PH1265
  Pab:  PAB0763
  Pya:  PAE3225
  Sso:  SSO0692
  Ape:  APE0978
  Tpa:  TP0342
  Bbu:  BB0819
_______

[R] COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes
  Afu:  AF0028 AF0181
  Mac:  MA0722
  Mth:  MTH1067
  Mja:  MJ1678
  Mka:  MK0229
_______

[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
  Afu:  AF0186 AF0564
  Mac:  MA0808 MA2718 MA3264
  Sce:  YCL017c
  Spo:  SPBC21D10.11c
  Ecu:  ECU11g1770
  Aae:  aq_1053 aq_739
  Tma:  TM1692
  Fnu:  FN0058
  Dra:  DR0215
  Cac:  CAC2234 CAC2972
  Cgl:  Cgl1043 Cgl1203
  Mtu:  Rv3025c
  MtC:  MT3109
  Mle:  ML1708
  Lla:  L111126 L122222
  Spy:  SPy0816 SPy1122
  Spn:  SP0880 SP1094
  Sau:  SA1450 SA1538
  Lin:  lin1548 lin1635 lin2130
  Bsu:  BS_nifS BS_nifZ BS_yrvO
  Bha:  BH1217 BH1260 BH3204
  Syn:  sll0704 slr0387
  Nos:  all1457 alr2505 alr3088
  Eco:  yfhO
  EcZ:  ZyfhO
  Ecs:  ECs3396
  Ype:  YPO2138 YPO2896
  Sty:  STM2543
  Buc:  BU602
  Vch:  VC0748
  Pae:  PA2062 PA3814
  Hin:  HI0378
  Pmu:  PM0318
  Nme:  NMB1379
  NmA:  NMA1594
  Rso:  RSc1019 RSp0173
  Hpy:  HP0220
  jHp:  jhp0206
  Cje:  Cj0240c
  Atu:  AGc3350
  Sme:  SMc00529
  Bme:  BMEI1043
  Mlo:  mll5865 mlr0015
  Ccr:  CC1865
  Rpr:  RP486 RP487
  Rco:  RC0730 RC0731
  Ctr:  CT258 CT721
  Cpn:  CPn0396 CPn0862
  Tpa:  TP0863
_______

[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)
  Tma:  TM0828
  Fnu:  FN1440
  Dra:  DRB0074
  Cac:  CAC0232 CAC2951
  Cgl:  Cgl1886 Cgl1890
  Mtu:  Rv2029c
  MtC:  MT2088
  Lla:  L0032
  Spy:  SPy0854 SPy1921
  Spn:  SP0876 SP1191
  Sau:  SA0654 SA1995
  Lin:  lin2199 lin2430
  Bsu:  BS_fruB
  Bha:  BH0827
  Eco:  fruK pfkB
  EcZ:  ZfruK ZpfkB
  Ecs:  ECs2429 ECs3060
  Ype:  YPO1299
  Sty:  STM1326 STM2205 STM3254
  Vch:  VCA0517
  Pae:  PA3561
  Hin:  HI0447
  Pmu:  PM1796
  Rso:  RSc2862
  Bbu:  BB0630
  Mpn:  MPN079
  Mge:  MG063
_______

[R] COG1106 Predicted ATPases
  Mja:  MJECL10 MJECL11
  Pho:  PH0155
  Pab:  PAB0539
  Sso:  SSO1739 SSO1994 SSO2277
  Fnu:  FN1086 FN1198 FN1553
  Nos:  alr3406
  Hpy:  HP1079
  jHp:  jhp0346 jhp1463
_______

[L] COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain
  Afu:  AF1337
  Hbs:  VNG0779C VNG1511C
  Mac:  MA0917
  Mth:  MTH763
  Mja:  MJ1198
  Mka:  MK0157
  Pho:  PH0340
  Pab:  PAB1284
_______

[P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components
  Afu:  AF1981
  Hbs:  VNG6262G
  Mac:  MA0025
  Mth:  MTH606
  Pho:  PH1651
  Pab:  PAB0351
  Pya:  PAE1247
  Ape:  APE0534
  Aae:  aq_2165 aq_621
  Tma:  TM0125
  Fnu:  FN0670 FN0671 FN1810
  Dra:  DR2283
  Cac:  CAC2878
  Cgl:  Cgl0028 Cgl2579
  Mtu:  Rv2060
  Mle:  ML0335
  Lla:  L149891 L165709
  Spy:  SPy0094 SPy0456
  Spn:  SP2170
  Sau:  SA0588 SA1384
  Lin:  lin0193 lin1484 lin1962
  Bsu:  BS_yceA BS_ytgC BS_ytgD
  Bha:  BH1390 BH1395
  Syn:  sll1600 slr2045
  Nos:  all0830 all3574
  Eco:  znuB
  EcZ:  ZyebI
  Ecs:  ECs2569
  Ype:  YPO2059 YPO2441 YPO2442
  Sty:  STM1893 STM2863 STM2864
  Buc:  BU317
  Vch:  VC2083
  Pae:  PA2409 PA5501
  Hin:  HI0359 HI0360 HI0407
  Pmu:  PM0241 PM0397 PM0398
  Nme:  NMB0587
  NmA:  NMA0790
  Cje:  Cj0141c
  Atu:  AGc2802 AGl3260 AGl801 AGl803
  Sme:  SMc02506 SMc02507 SMc04243
  Bme:  BMEII0176
  Mlo:  mll8314
  Rpr:  RP621
  Rco:  RC0964
  Ctr:  CT069_1 CT070 CT417
  Cpn:  CPn0346 CPn0347_1 CPn0543
  Tpa:  TP0036 TP0165 TP0166
_______

[G] COG1109 Phosphomannomutase
  Afu:  AF0458
  Hbs:  VNG0905G VNG2206G VNG2276G
  Mac:  MA0241 MA2665 MA3024
  Mth:  MTH1584 MTH1590 MTH1758
  Mja:  MJ0399 MJ1100
  Mka:  MK0893 MK0920
  Tac:  Ta0568
  Tvo:  TVN0620
  Pho:  PH0923 PH1210 PH1696
  Pab:  PAB0318 PAB0819 PAB1666
  Pya:  PAE0764
  Sso:  SSO0207
  Ape:  APE0317 APE2433
  Sce:  YEL058w YMR278w
  Spo:  SPAC1296.01c SPAC13C5.05c SPAC22F3.01 SPCC1840.05c
  Ecu:  ECU01g0650 ECU03g0340
  Aae:  aq_501 aq_512 aq_718_2
  Tma:  TM0184 TM0769
  Fnu:  FN0366 FN0559
  Dra:  DR2071 DRA0047
  Cac:  CAC0484 CAC2337 CAC2981_2
  Cgl:  Cgl0567 Cgl0666 Cgl0724
  Mtu:  Rv3257c Rv3308 Rv3441c
  MtC:  MT3355 MT3407 MT3546
  Mle:  ML0366 ML0706 ML0763
  Lla:  L35068
  Spy:  SPy1038 SPy1224 SPy1503
  Spn:  SP1498 SP1559
  Sau:  SA1965 SA2279
  Lin:  lin0858 lin1985 lin2223 lin2618
  Bsu:  BS_ybbT BS_yhxB
  Bha:  BH0267 BH1106
  Syn:  sll1496_2 sll1758 slr1334
  Nos:  all3964 all5089 alr1900 alr2361_2
  Eco:  cpsG mrsA
  EcZ:  ZcpsG ZmanB ZmrsA
  Ecs:  ECs2835 ECs2853 ECs4055
  Ype:  YPO2479 YPO3097 YPO3500
  Sty:  STM2083 STM2104 STM3294
  Buc:  BU381
  Vch:  VC0242 VC0611 VC0639 VCA1041
  Pae:  PA4749 PA5322
  Hin:  HI0740 HI1337 HI1463
  Pmu:  PM0440 PM1074
  Xfa:  XF0151 XF0260 XF1468
  Nme:  NMB0790 NMB1690
  NmA:  NMA1001 NMA1949
  Rso:  RSc0691 RSc1528
  Hpy:  HP0075 HP1275
  jHp:  jhp0070 jhp1196
  Cje:  Cj0360 Cj1407c
  Atu:  AGc4315 AGl2256
  Sme:  SMb21081 SMc00637
  Bme:  BMEI0344 BMEI1396 BMEII0899
  Mlo:  mll3879 mll7567 mlr5801
  Ccr:  CC0117 CC2264
  Rpr:  RP509
  Rco:  RC0657
  Ctr:  CT295 CT815
  Cpn:  CPn0056 CPn0967
  Tpa:  TP0413 TP0642
  Bbu:  BB0004 BB0835
  Uur:  UU530
  Mpn:  MPN066
  Mge:  MG053
_______

[L] COG1110 Reverse gyrase
  Afu:  AF1024
  Mja:  MJ1512_1 MJ1512_3
  Mka:  MK0049 MK0289
  Pho:  PH0800_1 PH0800_3
  Pab:  PAB2423
  Pya:  PAE1108
  Sso:  SSO0420 SSO0963
  Ape:  APE1340 APE1376
  Aae:  aq_1159 aq_886
  Tma:  TM0173
_______

[L] COG1111 ERCC4-like helicases
  Afu:  AF1458_1
  Hbs:  VNG2356G_1
  Mac:  MA0096_1
  Mth:  MTH1415_1
  Mja:  MJ1505_1
  Mka:  MK1678_1
  Tac:  Ta1501
  Tvo:  TVN1490
  Pho:  PH1896m_1
  Pab:  PAB0190_1
  Sce:  YIR002c_1
  Spo:  SPAC20H4.04 SPAC9.05
_______

[L] COG1112 Superfamily I DNA and RNA helicases and helicase subunits
  Afu:  AF1388 AF1960
  Hbs:  VNG1501G VNG2167G
  Mac:  MA3490
  Mth:  MTH1634 MTH487
  Mja:  MJ0104
  Mka:  MK0070
  Tac:  Ta1398
  Pho:  PH0109_2 PH0909
  Pab:  PAB0067_2 PAB1561
  Sso:  SSO1456
  Sce:  YER176w YHR164c YKL017c YLR430w YMR080c
  Spo:  SPAC16C9.06c SPAC6G9.10c SPBC16D10.04c SPBC29A10.10c SPCC1739.03 SPCC737.07c
  Ecu:  ECU05g1110 ECU09g1800 ECU10g1640
  Aae:  aq_2057 aq_791
  Tma:  TM0005 TM0618 TM1411_2
  Fnu:  FN0949 FN1445
  Cac:  CAC3036
  Mtu:  Rv1251c_2
  MtC:  MT1290_2
  Mle:  ML1098_2
  Sau:  SA0089
  Syn:  sll1582
  Eco:  yjhR
  EcZ:  Z1202 Z1642
  Ecs:  ECs1384
  Sty:  STM4489
  Pae:  PA2727_3 PA2728
  Xfa:  XF2409
  Hpy:  HP0435 HP0447
  Rco:  RC1124 RC1125 RC1126
  Uur:  UU389 UU571
  Mpu:  MYPU_1220
  Mpn:  MPN153
  Mge:  MG140
_______

[E] COG1113 Gamma-aminobutyrate permease and related permeases
  Cac:  CAC0727 CAC1472
  Cgl:  Cgl0463 Cgl0998 Cgl1083 Cgl1129
  Mtu:  Rv0346c Rv0522 Rv1704c Rv2127
  MtC:  MT0361 MT0544 MT1744 MT2186
  Mle:  ML1304 ML1305
  Lla:  L160176 L161441 L18622 L73435
  Spy:  SPy1654
  Sau:  SA1519 SA2109 SA2226 SA2227
  Lin:  lin0780
  Bsu:  BS_aapA BS_gabP BS_ybxG BS_ycgH BS_ydgF BS_ytnA BS_yvbW
  Bha:  BH2171
  Eco:  ansP aroP cycA gabP pheP proY yifK
  EcZ:  ZansP ZaroP ZcycA ZgabP ZpheP ZproY ZyifK
  Ecs:  ECs0116 ECs0452 ECs0614 ECs2057 ECs3524 ECs4729 ECs5186
  Ype:  YPO1743 YPO1859 YPO1937 YPO3201 YPO3421 YPO3854 YPO4015
  Sty:  STM0150 STM0400 STM0568 STM1584 STM2793 STM3930 STM4398
  Pae:  PA0129 PA0789 PA0866 PA2079 PA3000 PA5097
  Atu:  AGl2082
  Bme:  BMEII0038
_______

[E] COG1114 Branched-chain amino acid permeases
  Fnu:  FN0053 FN1059
  Cac:  CAC1610
  Cgl:  Cgl2257
  Spy:  SPy0323
  Spn:  SP0626
  Sau:  SA0180 SA0294 SA1239
  Bsu:  BS_braB BS_brnQ
  Eco:  brnQ
  EcZ:  ZbrnQ
  Ecs:  ECs0451
  Ype:  YPO3202
  Sty:  STM0399
  Vch:  VC0662
  Pae:  PA1590 PA1971
  Hin:  HI0226
  Pmu:  PM1873
  Ctr:  CT554
  Cpn:  CPn0836
  Tpa:  TP0265
_______

[E] COG1115 Na+/alanine symporter
  Mac:  MA2837
  Pho:  PH0781
  Pab:  PAB1527
  Fnu:  FN0328 FN1398 FN1747 FN1952 FN1953 FN2069
  Dra:  DRB0133
  Cgl:  Cgl0207
  Spy:  SPy1270
  Spn:  SP0408
  Sau:  SA0871 SA1190
  Bsu:  BS_alsT BS_ybgH BS_yflA BS_yrbD
  Bha:  BH1284 BH1772 BH2714 BH3926 BH4033
  Eco:  yaaJ
  EcZ:  ZyaaJ
  Ecs:  ECs0007
  Sty:  STM0006 STM1003
  Vch:  VC0784 VC1422 VC2356
  Pae:  PA2252 PA2533 PA3641
  Hin:  HI0183 HI0883
  Pmu:  PM0091 PM0529
  Nme:  NMB0177 NMB0194 NMB1647
  NmA:  NMA0073 NMA0091 NMA1901
  Hpy:  HP0942
  jHp:  jhp0877
  Cje:  Cj0903c
  Sme:  SMb20069 SMc04263
  Bme:  BMEII0783
  Ctr:  CT409 CT735
  Cpn:  CPn0536 CPn0876
  Tpa:  TP0414 TP0998
_______

[P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
  Afu:  AF0087 AF0638
  Mac:  MA0063
  Mja:  MJ0412
  Mka:  MK0603
  Tac:  Ta1178m
  Tvo:  TVN0386
  Pya:  PAE1066
  Sso:  SSO2469
  Tma:  TM0204 TM0483
  Fnu:  FN0235
  Dra:  DR0511_1 DR2198
  Cac:  CAC0107 CAC0619 CAC1401
  Cgl:  Cgl1194 Cgl1244 Cgl1245
  Spn:  SP2196
  Sau:  SA0166
  Bsu:  BS_ssuB BS_ytlC
  Bha:  BH1211 BH2680
  Syn:  sll1082 sll1452_1 sll1453 slr0043_1 slr0044
  Nos:  all3035 all3334 alr0610_1 alr0611 alr2879_1 alr2880
  Eco:  ssuB
  EcZ:  ZycbE
  Ecs:  ECs1016
  Ype:  YPO3627
  Pae:  PA0184 PA2294 PA2308 PA2329 PA3442 PA3447 PA3514
  Hin:  HI0354
  Pmu:  PM1266
  Xfa:  XF0412_1
  Rso:  RSc0379 RSc1199 RSc1341 RSc3372_1 RSp1507
  Atu:  AGc1932 AGc259 AGc4331 AGl1027GM AGl1200 AGl1395 AGl1890
        AGpT117 AGpT165
  Sme:  SMa0581 SMb20183 SMb20569 SMc01823 SMc02346
  Bme:  BMEII0108 BMEII0798 BMEII0961
  Mlo:  mll1253 mll1293 mll1625 mll1757 mll4555 mll6978 mll8572
        mll9179 mlr2861 mlr6796 mlr7115 mlr7950
  Ccr:  CC0611 CC1831 CC2634
  Ctr:  CT180
  Cpn:  CPn0231
_______

[P] COG1117 ABC-type phosphate transport system, ATPase component
  Afu:  AF1359
  Hbs:  VNG0452G VNG2482G
  Mac:  MA0890
  Mth:  MTH1731
  Mja:  MJ1012
  Mka:  MK1687
  Pab:  PAB0700
  Pya:  PAE1393
  Sso:  SSO0488
  Ape:  APE0050
  Aae:  aq_1055
  Tma:  TM1261
  Dra:  DRA0160
  Cac:  CAC1708
  Cgl:  Cgl2518
  Mtu:  Rv0820 Rv0933
  MtC:  MT0842 MT0960
  Mle:  ML2189
  Lla:  L154481 L155408
  Spy:  SPy1241 SPy1242
  Spn:  SP1396 SP1397 SP2087
  Sau:  SA1218
  Lin:  lin2638 lin2639
  Bsu:  BS_yjkB BS_yqgJ BS_yqgK
  Bha:  BH2991
  Syn:  sll0683 sll0684 slr1250
  Nos:  all0907 all0908 all4572
  Eco:  pstB
  EcZ:  ZpstB
  Ecs:  ECs4661
  Ype:  YPO2833 YPO4114
  Sty:  STM3854
  Vch:  VC0726 VCA0073
  Pae:  PA5366
  Hin:  HI1380
  Pmu:  PM0433
  Xfa:  XF2144
  Rso:  RSc1532
  Cje:  Cj0616
  Atu:  AGc743
  Sme:  SMc02142
  Bme:  BMEI1986
  Mlo:  mll3719
  Ccr:  CC0292
  Bbu:  BB0218
  Uur:  UU200
  Mpn:  MPN609
  Mge:  MG410
_______

[P] COG1118 ABC-type sulfate/molybdate transport systems, ATPase component
  Mtu:  Rv1859 Rv2397c
  MtC:  MT1907 MT2468
  Bha:  BH3130
  Syn:  sll0739_2 slr1455
  Nos:  all0126 alr2433_2
  Eco:  cysA
  EcZ:  Z4271 ZcysA
  Ecs:  ECs3293 ECs3803
  Ype:  YPO3012
  Sty:  STM2441 STM3075
  Vch:  VC0541
  Pae:  PA0280
  Xfa:  XF1347
  Nme:  NMB0879
  NmA:  NMA1097
  Rso:  RSc1347 RSp1145
  Hpy:  HP0475
  jHp:  jhp0427
  Cje:  Cj0300c
  Atu:  AGc1506 AGl2655
  Sme:  SMa2067 SMb21130
  Bme:  BMEI1838
  Mlo:  mlr1669
  Ccr:  CC1598
_______

[P] COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
  Mac:  MA3676
  Sce:  YDR061w
  Spo:  SPAC323.04
  Dra:  DR2145
  Cgl:  Cgl1198 Cgl2393
  Mtu:  Rv3041c
  MtC:  MT3126
  Mle:  ML1726
  Lla:  L44550
  Sau:  SA1958
  Lin:  lin1890
  Bsu:  BS_ylmA
  Bha:  BH2270
  Eco:  modF
  EcZ:  ZmodF
  Ecs:  ECs0788
  Ype:  YPO1142
  Sty:  STM0778
  Pmu:  PM0890
_______

[PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
  Afu:  AF0430 AF1401
  Hbs:  VNG1371Gm VNG2552G VNG2558G
  Mac:  MA0950 MA1132 MA1198 MA1233 MA2150 MA2776 MA2778
        MA3358 MA3453 MA3642 MA3919 MA3933 MA4532 MA4606
  Mja:  MJ0089 MJ0873
  Tac:  Ta1410
  Tvo:  TVN1429
  Pho:  PH0791 PH1235
  Pab:  PAB0678 PAB1536
  Sso:  SSO0487
  Ape:  APE1055
  Tma:  TM0078 TM0191
  Fnu:  FN0302 FN0307 FN0770 FN0817 FN0882 FN1968
  Dra:  DR2590 DRB0121
  Cac:  CAC0791 CAC1989 CAC2443
  Cgl:  Cgl0038 Cgl0491 Cgl0646 Cgl0655 Cgl1590 Cgl2059 Cgl2784
  Spy:  SPy0386 SPy1793
  Spn:  SP1035
  Sau:  SA0602
  Lin:  lin2074 lin2286 lin2523
  Bsu:  BS_fhuC BS_yfmF BS_yusV BS_yvrA_1
  Bha:  BH1039 BH1081 BH1587_1 BH3292 BH3295
  Syn:  slr1318
  Nos:  all0389 all2584 alr3241 alr4033
  Eco:  fecE fepC fhuC
  EcZ:  Z1964 Z4385 ZfepC ZfhuC
  Ecs:  ECs0155 ECs0627 ECs1697 ECs3916
  Ype:  YPO1312 YPO1345 YPO1533 YPO3392
  Sty:  STM0192 STM0590 STM0771
  Vch:  VC0201 VC0779
  Pae:  PA2912 PA4158
  Hin:  HI1272 HI1470
  Pmu:  PM0128 PM1080 PM1147 PM1309
  Rso:  RSc2398
  Hpy:  HP0888
  jHp:  jhp0821
  Cje:  Cj1616
  Atu:  AGl1656 AGl2292 AGl2857 AGl2867 AGpA452
  Sme:  SMa1741 SMb20058 SMb21429
  Bme:  BMEI0660 BMEII0537
  Mlo:  mlr8227
  Ccr:  CC1193
  Uur:  UU069 UU435
  Mpn:  MPN416
  Mge:  MG290
_______

[P] COG1121 ABC-type Mn/Zn transport systems, ATPase component
  Afu:  AF1982
  Hbs:  VNG6264G
  Mac:  MA0024
  Mth:  MTH605
  Pho:  PH1653
  Pab:  PAB0350
  Pya:  PAE1246
  Sso:  SSO2116
  Ape:  APE0532
  Aae:  aq_620
  Tma:  TM0124
  Fnu:  FN0669 FN1811
  Dra:  DR2284
  Cac:  CAC2877
  Cgl:  Cgl0029 Cgl2578
  Mle:  ML0336
  Lla:  L150744 L166512
  Spy:  SPy0093 SPy0454
  Spn:  SP1648 SP2171
  Sau:  SA0589 SA1385
  Lin:  lin0192 lin1485 lin1963
  Bsu:  BS_ycdI BS_ytgB
  Bha:  BH1389 BH1394
  Syn:  sll1599 slr2044
  Nos:  all0832 all3575
  Eco:  znuC
  EcZ:  ZyebM
  Ecs:  ECs2568
  Ype:  YPO2060 YPO2440
  Sty:  STM1892 STM2862
  Buc:  BU318
  Vch:  VC2082
  Pae:  PA2408 PA5500
  Hin:  HI0361 HI0408
  Pmu:  PM0242 PM0399
  Nme:  NMB0588
  NmA:  NMA0791
  Cje:  Cj0142c
  Atu:  AGc2804 AGl3258 AGl799
  Sme:  SMc02508 SMc04244
  Bme:  BMEII0177
  Mlo:  mll8315
  Rpr:  RP834
  Rco:  RC1289
  Ctr:  CT068 CT416
  Cpn:  CPn0348 CPn0542
  Tpa:  TP0035 TP0164
_______

[P] COG1122 ABC-type cobalt transport system, ATPase component
  Afu:  AF0731 AF1170 AF1841
  Hbs:  VNG1631G VNG2317G
  Mac:  MA0394 MA0870 MA1418 MA1747 MA3551 MA4020 MA4021
        MA4341 MA4342
  Mth:  MTH133 MTH1704 MTH454
  Mja:  MJ1088 MJ1572
  Mka:  MK0182
  Pho:  PH0132 PH1815
  Pab:  PAB0249 PAB2260
  Pya:  PAE2532
  Sso:  SSO0167 SSO1893 SSO2030
  Ape:  APE2154b APE2406 APE2408
  Tma:  TM0222 TM1663
  Fnu:  FN2004 FN2005
  Dra:  DR2469 DRA0269
  Cac:  CAC0773 CAC1368 CAC3101 CAC3102
  Cgl:  Cgl0519 Cgl1055 Cgl1914 Cgl2770
  Mtu:  Rv2326c
  MtC:  MT2388
  Mle:  ML0848
  Lla:  L123777 L75718 L76755
  Spy:  SPy1787 SPy2194 SPy2195
  Spn:  SP0483 SP0720 SP1438 SP2220 SP2221
  Sau:  SA0928 SA2020 SA2021 SA2476
  Lin:  lin1170 lin2749 lin2750
  Bsu:  BS_ybaE BS_ybxA BS_ykoD
  Bha:  BH0164 BH0165
  Syn:  sll0385 sll1623 slr0354
  Nos:  all1547 all4546 alr3946 alr3949
  EcZ:  Z4270
  Ecs:  ECs3802
  Sty:  STM2020 STM3074
  Vch:  VC1525
  Hin:  HI1618
  Rso:  RSc2632
  Atu:  AGc1362
  Sme:  SMc00962
  Bme:  BMEI0635 BMEI0636
  Tpa:  TP0227
  Uur:  UU538 UU539
  Mpu:  MYPU_3860 MYPU_3870
  Mpn:  MPN193 MPN194 MPN432 MPN433
  Mge:  MG179 MG180 MG303 MG304
_______

[R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase
  Mac:  MA0844 MA3967 MA3998
  Mth:  MTH1015 MTH151
  Mja:  MJ1242 MJ1662
  Mka:  MK1189 MK1433
  Tac:  Ta0270 Ta1280
  Sso:  SSO3055
  Fnu:  FN0195
  Cgl:  Cgl1947 Cgl2271 Cgl2382
  Mtu:  Rv1281c Rv3663c
  MtC:  MT1318 MT3764
  Mle:  ML1122
  Sau:  SA0198
  Syn:  sll1927
  Nos:  all4778 alr1552
  Eco:  yliA
  EcZ:  Z1053
  Ecs:  ECs0908
  Ype:  YPO2663
  Sty:  STM0848 STM1258
  Vch:  VC0170 VCA1101
  Rso:  RSc1379
  Hpy:  HP0250
  jHp:  jhp0235
  Atu:  AGc4685 AGl1323 AGl2820 AGl2889 AGl3112 AGl318 AGl3504
        AGl3533 AGl685 AGl846 AGpA497 AGpA93 AGpT146
  Sme:  SMa0298 SMa0470 SMa1434 SMa1864 SMb20111 SMb20141 SMb21040
        SMb21260 SMc01645 SMc02027 SMc03268 SMc04036 SMc04288
  Mlo:  mll1656 mll5123 mll7031 mll7244 mll7347 mlr0986 mlr2279
        mlr3264 mlr6287 mlr9214
_______

[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
  Mac:  MA1910
  Tvo:  TVN0512
  Fnu:  FN1500
  Spy:  SPy2004
  Sau:  SA2251
  Bha:  BH2078
  Eco:  ddpF nikE
  EcZ:  Z2227 ZnikE
  Ecs:  ECs2087 ECs4347
  Ype:  YPO2664 YPO3453
  Sty:  STM1259
  Atu:  AGc4567 AGl2744 AGl526 AGl867
  Sme:  SMc01529
  Bme:  BMEII0491
  Mlo:  mll9132 mlr5517 mlr6675
  Ctr:  CT202
  Cpn:  CPn0202
  Uur:  UU559
  Mpu:  MYPU_4130
_______

[E] COG1125 ABC-type proline/glycine betaine transport systems, ATPase components
  Afu:  AF0981
  Fnu:  FN2008
  Dra:  DRA0137
  Cac:  CAC1475 CAC2850
  Mtu:  Rv3758c
  MtC:  MT3865
  Lla:  L64737
  Spy:  SPy1133
  Spn:  SP1861
  Sau:  SA0677 SA2237
  Lin:  lin1460 lin1467
  Bsu:  BS_opuBA BS_opuCA
  Nos:  alr0972
  Eco:  yehX
  EcZ:  ZyehX
  Ecs:  ECs3016
  Ype:  YPO1198
  Sty:  STM1491 STM2163
  Pae:  PA3891
  Hpy:  HP0819
  jHp:  jhp0758
  Atu:  AGc334
  Sme:  SMa1466 SMb21146
  Bme:  BMEI1727
  Mlo:  mlr8415
_______

[E] COG1126 ABC-type polar amino acid transport system, ATPase component
  Afu:  AF0680
  Mac:  MA0788 MA0789
  Pya:  PAE2001
  Ape:  APE1891
  Tma:  TM0591
  Fnu:  FN0801
  Dra:  DR1648
  Cac:  CAC0112 CAC0378 CAC0879 CAC3327 CAC3618
  Cgl:  Cgl1298 Cgl1905
  Lla:  L164012 L2385 L37916
  Spy:  SPy0276 SPy1275 SPy1316 SPy1506 SPy1657
  Spn:  SP0452 SP0610 SP0709 SP0824 SP1242 SP1460 SP1501
  Sau:  SA1674 SA2200
  Lin:  lin0841 lin1850 lin2353 lin2440
  Bsu:  BS_glnQ BS_hisP BS_yckI BS_yqiZ BS_yxeO
  Bha:  BH0172 BH1463
  Syn:  slr1735
  Nos:  alr4167
  Eco:  glnQ gltL yecC yhdZ
  EcZ:  ZglnQ ZgltL ZyecC ZyhdZ
  Ecs:  ECs0691 ECs0887 ECs2655 ECs4144
  Ype:  YPO1848 YPO2514 YPO2612 YPO3254
  Sty:  STM0662 STM0828 STM1635 STM1951
  Vch:  VC0008 VC1359 VCA1037
  Pae:  PA1256 PA1339 PA4192 PA5074
  Hin:  HI1078
  Nme:  NMB0696 NMB0789
  NmA:  NMA0900 NMA1000
  Rso:  RSc0484 RSc1743 RSc2106 RSc2260 RSc3408 RSp0428 RSp0479
        RSp0932
  Hpy:  HP1171
  jHp:  jhp1098
  Cje:  Cj0469 Cj0902 Cj0922c
  Atu:  AGc2571 AGc2580 AGc2909 AGl1162 AGl1253 AGl257 AGl2810_2
        AGl2925 AGl381 AGl402 AGl671 AGpA331 AGpA712 AGpA9_2
  Sme:  SMa0083 SMa0489 SMa0508 SMa2195 SMb20266 SMb20427 SMb21096
        SMb21138 SMc02121 SMc03135 SMc03894
  Bme:  BMEI0108 BMEI0111 BMEI1208 BMEII0599
  Mlo:  mll3858 mlr2206 mlr3801 mlr7132 mlr8154 mlr9616
  Ccr:  CC1439
  Rpr:  RP868
  Rco:  RC1341
  Ctr:  CT130
  Cpn:  CPn0191
_______

[Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component
  Aae:  aq_1531 aq_2137
  Mtu:  Rv0655
  MtC:  MT0684
  Mle:  ML1892
  Syn:  sll1001 sll1041
  Nos:  alr0180
  Eco:  yrbF
  EcZ:  ZyrbF
  Ecs:  ECs4074
  Ype:  YPO3575
  Sty:  STM3313
  Vch:  VC2520
  Pae:  PA3212 PA4456
  Hin:  HI1087
  Pmu:  PM0174
  Xfa:  XF0421 XF1302
  Nme:  NMB1966
  NmA:  NMA0485
  Rso:  RSc0314 RSc2962
  Hpy:  HP1465
  jHp:  jhp1358
  Cje:  Cj1647
  Atu:  AGc3034
  Sme:  SMc00175
  Bme:  BMEI0964
  Mlo:  mll0800
  Ccr:  CC2319 CC3696
  Rpr:  RP097
  Rco:  RC0130
_______

[G] COG1129 ABC-type sugar transport system, ATPase component
  Tma:  TM0115 TM0956
  Fnu:  FN1166 FN1898
  Cgl:  Cgl0032 Cgl1223
  Lla:  L84240
  Bsu:  BS_rbsA
  Bha:  BH2322 BH3441 BH3730
  Eco:  alsA araG ego mglA rbsA xylG yphE
        ytfR ytfS
  EcZ:  Z0416 Z0417 Z2192 Z5691 Z5839 ZaraG ZmglA
        ZrbsA ZxylG ZyphE
  Ecs:  ECs0375 ECs0376 ECs2120 ECs2608 ECs3041 ECs3413 ECs4450
        ECs4691 ECs5073 ECs5206
  Ype:  YPO0412 YPO0858 YPO0958 YPO1294 YPO1508 YPO1814 YPO2256
        YPO2500 YPO2582 YPO3316 YPO3330 YPO3634 YPO3907 YPO3964
        YPO4036
  Sty:  STM2189 STM3882 STM4074
  Vch:  VC1327 VCA0128
  Pae:  PA1947
  Hin:  HI0502 HI0823 HI1110
  Pmu:  PM0155 PM1039 PM1251 PM1274 PM1326 PM1379
  Rso:  RSc1016 RSc1242 RSc2757 RSp1634
  Atu:  AGc3484 AGc4264 AGc5112 AGc98 AGl1081 AGl1642 AGl1931
        AGl2027 AGl2509 AGl2591 AGl268 AGl2683 AGl2903 AGl3184
        AGl3220 AGl3487 AGl85 AGl992 AGpT138
  Sme:  SMa0072 SMa0199 SMa0216 SMa0270 SMa1421 SMa1998 SMb20017
        SMb20317 SMb20351 SMb20485 SMb20503 SMb20507 SMb20622 SMb20673
        SMb20713 SMb20718 SMb20855 SMb20894 SMb20904 SMb20930 SMb21019
        SMb21344 SMb21376 SMb21422 SMb21588 SMc02020 SMc02032 SMc02169
        SMc02325 SMc02337 SMc02773 SMc03815
  Bme:  BMEI0391 BMEI0665 BMEI1392 BMEII0145 BMEII0300 BMEII0361 BMEII0432
        BMEII0982
  Mlo:  mll1002 mll1016 mll1506 mll1680 mll1722 mll1921 mll2146
        mll3403 mll3598 mll3710 mll4203 mll4992 mll5657 mll5705
        mll5770 mll7018_1 mll7081 mll7362 mll7373 mll7666 mll8568
        mlr1693 mlr1891 mlr2442 mlr3336 mlr4967 mlr7286 mlr7585
        mlr7627 mlr8214 mll7012
  Ccr:  CC0860
  Tpa:  TP0685
  Bbu:  BB0318
  Mpu:  MYPU_3440
_______

[V] COG1131 ABC-type multidrug transport system, ATPase component
  Afu:  AF0393 AF0984 AF1006 AF1021 AF1136 AF1139 AF1300
        AF1884
  Hbs:  VNG0465Gm VNG0470G VNG0668C VNG0689G VNG1247G VNG1893G VNG2378G
        VNG6326G
  Mac:  MA0845 MA0853 MA0868 MA1106 MA1430 MA1536 MA1596
        MA2110 MA2215 MA2689 MA4036 MA4206 MA4321 MA4360
  Mth:  MTH1093 MTH1370 MTH1487
  Mka:  MK0944
  Tac:  Ta0066 Ta0088m Ta0225 Ta0233 Ta0641m Ta0733 Ta0857
        Ta0869 Ta1027 Ta1072
  Tvo:  TVN0022 TVN0149 TVN0165 TVN0527 TVN0935 TVN0959 TVN1039
        TVN1367
  Pho:  PH0820 PH0913 PH1230 PH1366 PH1490 PH1532 PH1849
  Pab:  PAB0434 PAB1668 PAB1696 PAB1703 PAB1845 PAB1923 PAB2068
  Pya:  PAE0269 PAE0315 PAE1168 PAE1199 PAE3066 PAE3619
  Sso:  SSO0053 SSO1144 SSO1266 SSO1319 SSO1934 SSO2137 SSO2402
        SSO2600 SSO2647 SSO3083 SSO3093 SSO3169
  Ape:  APE0471 APE1026 APE1255 APE1380 APE1548 APE1829 APE1911
        APE1934 APE2516 APE2579
  Sce:  YCR011c_2 YDR011w_1 YDR011w_3 YDR406w_1 YDR406w_3 YIL013c_1 YIL013c_3
        YNR070w_1 YNR070w_3 YOL075c_1 YOL075c_3 YOR011w_1 YOR011w_3 YOR153w_1
        YOR153w_3 YOR328w_1 YOR328w_3 YPL058c_1 YPL058c_3
  Spo:  SPAPB24D3.09c_1 SPAPB24D3.09c_3 SPCC18B5.01c_2
  Ecu:  ECU03g0390_1 ECU07g0560_1 ECU08g0110_1 ECU10g1520_1 ECU11g1340_1
  Tma:  TM0389 TM0544 TM0765 TM0793 TM1028 TM1302 TM1403
        TM1638
  Dra:  DR0406 DR1012 DR2316 DRA0007
  Cac:  CAC0138 CAC0147 CAC0169 CAC0236 CAC0241 CAC0266 CAC0268
        CAC0288 CAC0833 CAC0861 CAC0866 CAC2040 CAC2734 CAC2932
        CAC3026 CAC3269 CAC3405 CAC3520 CAC3608 CAP0090
  Cgl:  Cgl0922 Cgl1420 Cgl1530 Cgl1647 Cgl1972 Cgl2008 Cgl2690
        Cgl2979
  Mtu:  Rv1218c Rv1458c Rv1687c Rv1747_2 Rv2688c Rv2936
  MtC:  MT1256 MT1505 MT1727 MT1789_2 MT2762 MT3006
  Mle:  ML0590 ML2352
  Lla:  L119676 L192192 L50637 L58125 L68475
  Spy:  SPy0744 SPy1085 SPy1286 SPy1674 SPy1729 SPy1784
  Spn:  SP0522 SP0707 SP0957 SP1062 SP1381 SP1426 SP1704
        SP1715_1 SP2003
  Sau:  SA0197 SA0266 SA0339 SA1156 SA1655 SA1745 SA1747
        SA2302
  Lin:  lin0307 lin0672 lin0744 lin0750 lin0924 lin0978 lin0985
        lin1677 lin1835 lin2078 lin2318 lin2330 lin2342 lin2912
        pli0041
  Bsu:  BS_ecsA BS_ybdA BS_ycbN BS_ydbJ BS_yfiL BS_yhcG BS_yhcH
        BS_ythP BS_ytrB BS_yvfR BS_ywhQ BS_yxlF BS_yybJ
  Bha:  BH0179 BH0290 BH0382 BH0445 BH0448 BH0652 BH0818
        BH1003 BH1054_2 BH1165 BH1191 BH2098 BH2648 BH3214
        BH3493 BH3893 BH3894_1 BH3979
  Syn:  sll0415 sll0489 sll0759 sll0778_2 slr1113
  Nos:  all2672 all4389 all7196_1 alr0077 alr0970 alr1490 alr1619
        alr2372 alr2486
  Eco:  yadG ybhF yhiH_1
  EcZ:  ZyadG ZybhF ZyhiH_1
  Ecs:  ECs0131 ECs0872 ECs4359_1
  Ype:  YPO3406
  Sty:  STM0172 STM0817 STM3586_1
  Vch:  VC0589
  Pae:  PA2812 PA3394 PA3672 PA4037 PA5231_1
  Pmu:  PM0470 PM1982_1
  Xfa:  XF1223 XF1602
  Nme:  NMB0579
  NmA:  NMA0763
  Rso:  RSc0164 RSc1974 RSc2956 RSp1371
  Hpy:  HP0613 HP1220
  jHp:  jhp0300 jhp1141
  Atu:  AGc3498 AGl430_1
  Sme:  SMa0864 SMa1184 SMb20184 SMb21206 SMc04219
  Bme:  BMEI0654_1 BMEII0802 BMEII0971
  Mlo:  mll1914 mll4523 mlr4595 mlr6164
  Ccr:  CC0188 CC0838 CC1147 CC1276 CC1518 CC3280 CC3373
        CC3566
  Bbu:  BB0573 BB0754
  Uur:  UU093
  Mpu:  MYPU_1960
  Mpn:  MPN334
_______

[V] COG1132 ABC-type multidrug transport system, ATPase and permease components
  Hbs:  VNG0123G
  Mac:  MA2472 MA2473 MA2939
  Pho:  PH1735 PH1736
  Pab:  PAB2147 PAB2148
  Pya:  PAE1878 PAE2301
  Sso:  SSO3012
  Sce:  YDR135c YGR281w YHL035c YKL209c YKR103w YKR104w YLL015w
        YLL048c YLR188w YPL270w
  Spo:  SPAC30.04c SPAC3F10.11c SPAC9E9.12c SPBC2G5.09c SPBC359.05 SPBC9B6.09c SPCC663.03
  Ecu:  ECU01g0200 ECU01g1410 ECU03g0240 ECU04g0480 ECU10g1230 ECU11g1200
  Aae:  aq_1563
  Tma:  TM0043 TM0287 TM0288 TM1256 TM1310 TM1319 TM1328
  Fnu:  FN0598 FN0614 FN0615 FN1080 FN1435 FN1436 FN1820
  Dra:  DR0095 DR0096 DR0163 DR2051 DR2052 DR2379 DR2404
        DRA0349
  Cac:  CAC0661 CAC1558 CAC1613 CAC2392 CAC2393 CAC2755 CAC2756
        CAC3281 CAC3282 CAC3414 CAC3415
  Cgl:  Cgl0236 Cgl0928 Cgl0929 Cgl0939 Cgl0940 Cgl1106 Cgl1122
        Cgl1398 Cgl1399 Cgl1488 Cgl1489 Cgl2025 Cgl2026 Cgl2246
  Mtu:  Rv0194_1 Rv0194_2 Rv1272c Rv1273c Rv1348_2 Rv1349 Rv1620c
  MtC:  MT0204 MT1310 MT1311 MT1390_2 MT1392 MT1656
  Mle:  ML1113 ML1114
  Lla:  L102979 L104789 L109162 L110899 L116532 L162870 L59135
        L61006 L61680
  Spy:  SPy0229 SPy0230 SPy1084 SPy1148 SPy1149 SPy1790
  Spn:  SP0137 SP1342 SP1357 SP1358 SP1434 SP1435 SP1839
        SP1840 SP1918 SP1919 SP2073 SP2075
  Sau:  SA0599 SA1683 SA2216 SA2217
  Lin:  lin0155 lin0156 lin0616 lin0617 lin0829 lin1098 lin1691
        lin1692 lin2888 lin2894 lin2895
  Bsu:  BS_yfiB BS_yfiC BS_ygaD BS_yheH BS_yheI BS_yknU BS_yknV
        BS_yvcC BS_ywjA
  Bha:  BH0713 BH0813 BH0814 BH0815 BH0941 BH1125 BH1126
        BH1157 BH1158 BH2335 BH2336 BH3891
  Syn:  sll1276 sll1725 slr0615 slr1149 slr1488 slr1494 slr2019
  Nos:  all0640 all1294 all2146 all2622 all2623 all4730 all4731
        all4732 all4955 all5193 alr0583 alr1554 alr1978 alr2835
        alr4715 alr5199 asl1293
  Eco:  mdlA mdlB msbA
  EcZ:  ZmdlA ZmdlB ZmsbA
  Ecs:  ECs0502 ECs0503 ECs0997
  Ype:  YPO0770 YPO0771 YPO1395 YPO1735 YPO1913 YPO1914 YPO3144
        YPO3145
  Sty:  STM0460 STM0461 STM0984 STM2774
  Buc:  BU479 BU480
  Vch:  VC0199 VC1499 VC1878 VCA0996
  Pae:  PA0860 PA1113 PA3228 PA4222 PA4223 PA4997
  Hin:  HI0060 HI0664 HI1051
  Pmu:  PM0861 PM1301 PM1473
  Xfa:  XF1081 XF2582
  Nme:  NMB0264 NMB1919
  NmA:  NMA0535 NMA2223
  Rso:  RSc1808 RSc1809 RSc2200
  Hpy:  HP0600 HP1082 HP1206
  jHp:  jhp0343 jhp0547 jhp1129
  Cje:  Cj0803 Cj1130c
  Atu:  AGc3190 AGc4077 AGc4079 AGc4668 AGc4944 AGl2179 AGl309
        AGl552
  Sme:  SMb20813 SMb20941 SMb21191 SMb21268 SMb21269 SMc00185 SMc00186
        SMc02836 SMc03900 SMc03991
  Bme:  BMEI0323 BMEI0471 BMEI0472 BMEI0984 BMEI1742 BMEI1743 BMEII0250
  Mlo:  mll0815 mll2714 mll2715 mll3934 mll5254 mll5362 mll7116
        mll7118 mlr1948 mlr3255 mlr4641 mlr5867 mlr8326
  Ccr:  CC0305 CC3274 CC3420
  Rpr:  RP214 RP387 RP388 RP696
  Rco:  RC0286 RC0301 RC0534 RC1073
  Ctr:  CT264
  Cpn:  CPn0413
  Uur:  UU059 UU060
  Mpu:  MYPU_0390 MYPU_0400 MYPU_0410 MYPU_7410 MYPU_7420
  Mpn:  MPN018 MPN019
  Mge:  MG014 MG015
_______

[I] COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components
  Eco:  sbmA
  EcZ:  ZsbmA
  Ecs:  ECs0427
  Sty:  STM0376
  Cje:  Cj0182
  Atu:  AGc4191
  Sme:  SMb20999
  Bme:  BMEI1553
  Mlo:  mlr7400
_______

[GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component
  Afu:  AF0041 AF0290
  Mac:  MA1177
  Aae:  aq_1094
  Cac:  CAC2328
  Cgl:  Cgl0201
  Mtu:  Rv3781
  MtC:  MT3890
  Mle:  ML0114
  Lla:  L137446_1 L4342
  Spy:  SPy0790
  Sau:  SA0593 SA1688
  Lin:  lin1063
  Bsu:  BS_tagH_1
  Bha:  BH3659
  Syn:  sll0575 slr0982 slr2108 ssr2802
  Nos:  all0916 alr4486
  Sty:  STM0723
  Vch:  VC0247
  Pae:  PA1386 PA5450
  Pmu:  PM0781
  Xfa:  XF2568
  Nme:  NMB0074
  NmA:  NMA0195
  Cje:  Cj1447c
  Sme:  SMb20832
  Bme:  BMEI1416
  Mlo:  mll7564
  Ccr:  CC0634
  Rpr:  RP003
  Rco:  RC0003
_______

[P] COG1135 ABC-type metal ion transport system, ATPase component
  Fnu:  FN0660
  Dra:  DR1356
  Cac:  CAC0984
  Cgl:  Cgl0618
  Lla:  L121289
  Spy:  SPy0320
  Spn:  SP0151
  Sau:  SA0420 SA0769
  Lin:  lin0312 lin2514
  Bsu:  BS_yusC
  Bha:  BH3481
  Syn:  sll1870
  Nos:  alr4311
  Eco:  abc
  EcZ:  Zabc
  Ecs:  ECs0201
  Ype:  YPO1073 YPO1318
  Sty:  STM0247 STM0511
  Vch:  VC0907
  Pae:  PA2350 PA5503
  Hin:  HI0621
  Pmu:  PM1728
  Xfa:  XF0875
  Nme:  NMB1948
  NmA:  NMA0504
  Rso:  RSc0920
  Hpy:  HP1576
  jHp:  jhp1484
  Cje:  Cj0774c
  Atu:  AGl765
  Sme:  SMc03159
  Bme:  BMEII0337
  Mlo:  mll4792
  Ccr:  CC2669
  Cpn:  CPn0280
  Tpa:  TP0120
_______

[V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component
  Afu:  AF1018 AF1469 AF1819
  Hbs:  VNG0002G VNG0799C
  Mac:  MA0377 MA1120 MA1227 MA1273 MA1668 MA1752 MA2275
        MA2488 MA2548 MA2840 MA3171 MA3582 MA3957 MA3960
  Mth:  MTH1673 MTH696
  Mja:  MJ0121 MJ0796 MJ1508
  Mka:  MK0809 MK1654
  Pya:  PAE2286 PAE2699 PAE2785
  Sso:  SSO0688 SSO1034 SSO1078
  Ape:  APE1253
  Aae:  aq_297 aq_417
  Tma:  TM0194 TM0352 TM0705
  Fnu:  FN0130 FN0582 FN0827 FN1348 FN1352
  Dra:  DR0473 DR2192 DRA0280 DRB0049
  Cac:  CAC0066 CAC0164 CAC0226 CAC0245 CAC0319 CAC0373 CAC0453
        CAC0526 CAC0822 CAC1518 CAC1535 CAC1998 CAC2256 CAC2732
        CAC3560 CAC3585 CAC3616
  Cgl:  Cgl0616 Cgl0833 Cgl1966 Cgl2501 Cgl2938
  Mtu:  Rv0073_1 Rv0986 Rv2564_1
  MtC:  MT0079_1 MT1014 MT2640_1
  Lla:  L110431 L119891_1 L132038 L15262 L192122 L52030 L79717
        L94760
  Spy:  SPy0773 SPy0837 SPy1257 SPy1912 SPy2031
  Spn:  SP0111 SP0600 SP0687 SP0786 SP0912 SP1341 SP1653
        SP1957 SP1987
  Sau:  SA0192 SA0297 SA0616 SA0888 SA2149 SA2416 SA2492
        SAP022
  Lin:  lin0233 lin0418 lin0746 lin0866 lin1186 lin1540 lin1859
        lin2219 lin2471 lin2725 lin2914
  Bsu:  BS_yclH BS_yknY BS_ytrE BS_ytsC BS_yvcR BS_yvrO BS_yxdL
  Bha:  BH0273 BH0281 BH0286 BH0599 BH0753 BH1756 BH2699
        BH3122 BH3505 BH3673 BH3913
  Syn:  sll0484 slr0544
  Nos:  all0439 all0807 alr0447 alr1507 alr3649 alr3712 alr4282
        alr4975
  Eco:  lolD ybjZ_1
  EcZ:  Z1552 ZybjZ_1 ZycfV
  Ecs:  ECs0965_1 ECs1292 ECs1495
  Ype:  YPO1365_1 YPO1497 YPO1627 YPO1946 YPO3000_1
  Sty:  STM0942_1 STM1218
  Buc:  BU296
  Vch:  VC1568 VC1630 VC1883 VC2553 VCA0855
  Pae:  PA0073 PA2390_1 PA2987 PA4064 PA4594
  Hin:  HI1549
  Pmu:  PM0448 PM0561 PM0996_1 PM1823
  Xfa:  XF1077
  Nme:  NMB0549_1 NMB1234
  NmA:  NMA0729_1 NMA1402
  Rso:  RSc1118 RSp1464
  Hpy:  HP0179 HP0748
  jHp:  jhp0167 jhp0685
  Cje:  Cj0607_1 Cj1180c Cj1277c Cj1663
  Atu:  AGc2377 AGc3334 AGpA191 AGpA247_1 AGpA663
  Sme:  SMa1120 SMb20370 SMc01376 SMc04351_1
  Bme:  BMEI0360_1 BMEI1138
  Mlo:  mll1341 mlr1396 mlr4461 mlr4463
  Ccr:  CC0932 CC1929 CC2091
  Rpr:  RP700
  Rco:  RC1077
  Ctr:  CT152
  Cpn:  CPn0248
  Tpa:  TP0581 TP0964
  Bbu:  BB0080 BBJ26
  Uur:  UU118
  Mpu:  MYPU_0640 MYPU_0660_1 MYPU_6250_1 MYPU_6260_1 MYPU_7730
  Mpn:  MPN081 MPN683 MPN685
  Mge:  MG065 MG467 MG468.1
_______

[R] COG1137 ABC-type (unclassified) transport system, ATPase component
  Aae:  aq_413
  Tma:  TM1054
  Fnu:  FN0695
  Dra:  DR2134
  Syn:  slr0251
  Nos:  alr4068
  Eco:  yhbG
  EcZ:  ZyhbG
  Ecs:  ECs4080
  Ype:  YPO3581
  Sty:  STM3319
  Vch:  VC2528
  Pae:  PA4461
  Hin:  HI1148
  Pmu:  PM0171
  Xfa:  XF1409
  Nme:  NMB0356
  NmA:  NMA2131
  Rso:  RSc0409
  Hpy:  HP0715
  jHp:  jhp0653
  Cje:  Cj0669
  Atu:  AGc582
  Sme:  SMc01138
  Bme:  BMEI1790
  Mlo:  mll3197
  Ccr:  CC3600
  Rpr:  RP508
  Rco:  RC0658
  Ctr:  CT653
  Cpn:  CPn0723
  Tpa:  TP0786
  Bbu:  BB0466
_______

[O] COG1138 Cytochrome c biogenesis factor
  Afu:  AF2192
  Mac:  MA3304
  Pya:  PAE3624
  Ape:  APE2274
  Dra:  DR0346
  Eco:  ccmF nrfE
  EcZ:  ZccmF ZnrfE
  Ecs:  ECs3085 ECs5056
  Ype:  YPO2739
  Sty:  STM2249 STM3814 STM4281_1
  Vch:  VC2052
  Pae:  PA1480
  Hin:  HI0936 HI1094
  Pmu:  PM0010 PM0027
  Xfa:  XF2460
  Atu:  AGc1787
  Sme:  SMc02363
  Bme:  BMEI1332
  Mlo:  mlr7690
  Ccr:  CC2760
  Rpr:  RP703
  Rco:  RC1080
_______

[C] COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain
  Afu:  AF0811
  Hbs:  VNG6379C_1
  Mth:  MTH140
  Tac:  Ta0538
  Tvo:  TVN0592
  Pya:  PAE1289
  Sso:  SSO3130
  Ape:  APE0258 APES006
  Fnu:  FN1540_1
  Dra:  DR1908
  Lla:  L175101
  Bsu:  BS_yvfW
  Bha:  BH1833
  Eco:  ykgF
  EcZ:  ZykgF
  Ecs:  ECs0345
  Pmu:  PM1854
  Nme:  NMB1438
  NmA:  NMA1650
  Rso:  RSc1612
  Hpy:  HP0138
  jHp:  jhp0126
  Cje:  Cj0074c
_______

[C] COG1140 Nitrate reductase beta subunit
  Pya:  PAE3612
  Ape:  APE1294
  Cgl:  Cgl1162
  Mtu:  Rv1162
  MtC:  MT1199
  Sau:  SA2184
  Bsu:  BS_narH
  Eco:  narH narY
  EcZ:  ZnarH ZnarY
  Ecs:  ECs1730 ECs2070
  Sty:  STM1578 STM1763
  Pae:  PA3874
  Rso:  RSp0975
  Bme:  BMEII0951
_______

[C] COG1141 Ferredoxin
  Afu:  AF0166
  Hbs:  VNG1558H VNG2370C
  Mth:  MTH1819
  Pab:  PAB7439
  Pya:  PAE0605 PAE2013
  Ape:  APES001
  Tma:  TM0927
  Cac:  CAC3621
  Mtu:  Rv0763c Rv1786 Rv3503c
  MtC:  MT0787.1 MT1835 MT3607
  Lla:  L176167
  Spy:  SPy0801
  Spn:  SP1605
  Sau:  SA1315
  Lin:  lin2058
  Bsu:  BS_fer
  Bha:  BH0209 BH1605 BH2357
  Syn:  sll0662
  Nos:  alr0045
_______

[C] COG1142 Fe-S-cluster-containing hydrogenase components 2
  Afu:  AF0950
  Mac:  MA3283
  Mth:  MTH105_1 MTH1714 MTH1736 MTH1737
  Mja:  MJ0155 MJ0264 MJ0265
  Mka:  MK0084 MK0725
  Pho:  PH0893 PH1750
  Pab:  PAB0213 PAB2084
  Tma:  TM0396
  Syn:  sll0031
  Nos:  alr2308
  Eco:  aegA_1 hycB hydN hyfA ygfS ygfT_1 yiaI
  EcZ:  ZhycB ZhydN ZhyfA ZyffG_1 ZygfS ZygfT_1 ZyiaI
  Ecs:  ECs3330_1 ECs3343 ECs3569 ECs3580 ECs3758 ECs3759_1 ECs4456
  Ype:  YPO0342_1 YPO0343
  Sty:  STM2479_1 STM2843 STM2852 STM3666
_______

[C] COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
  Afu:  AF1832a
  Hbs:  VNG0640G
  Mac:  MA1500
  Mth:  MTH1240
  Mja:  MJ1302
  Tac:  Ta0965
  Tvo:  TVN1111
  Pho:  PH1440 PH1446
  Pab:  PAB0496 PAB1395 PAB1894
  Pya:  PAE1580
  Sso:  SSO0326
  Ape:  APE1419
  Aae:  aq_1317 aq_1375
  Tma:  TM1217_1
  Dra:  DR1497
  Mtu:  Rv3153
  MtC:  MT3241
  Syn:  sll0520
  Nos:  alr0224
  Eco:  hycF hyfH nuoI
  EcZ:  ZhycF ZhyfH ZnuoI
  Ecs:  ECs3165 ECs3350 ECs3576
  Ype:  YPO2548
  Sty:  STM2321 STM2848
  Buc:  BU161
  Pae:  PA2644
  Xfa:  XF0313
  Nme:  NMB0251
  NmA:  NMA0008
  Rso:  RSc2054
  Hpy:  HP1268
  jHp:  jhp1189
  Cje:  Cj1571c
  Atu:  AGc2355
  Sme:  SMa1519 SMc01922
  Bme:  BMEI1150
  Mlo:  mll1359
  Ccr:  CC1942
  Rpr:  RP795
  Rco:  RC1229
_______

[C] COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit
  Afu:  AF1700 AF2054
  Mac:  MA0033
  Mth:  MTH1740_2
  Mja:  MJ0268
  Mka:  MK0081
  Tac:  Ta0627
  Tvo:  TVN0834
  Pho:  PH0679 PH0682
  Pab:  PAB1471 PAB1474
  Pya:  PAE1041 PAE3276
  Sso:  SSO11071 SSO2128 SSO7412
  Aae:  aq_1171a aq_1192a
  Tma:  TM0016
  Hpy:  HP1109
  jHp:  jhp1036
_______

[C] COG1145 Ferredoxin
  Afu:  AF0156 AF0271_1 AF0355 AF0463m AF0627 AF0688 AF0923
        AF0953_1 AF1185 AF1263 AF1644 AF1649_2 AF2142
  Mac:  MA0150_2 MA0305 MA0431 MA0463 MA0628_2 MA0671 MA0683
        MA0739_2 MA0849_2 MA1031_2 MA1485 MA1493 MA1822 MA2245
        MA2742_1 MA2867 MA2877_2 MA2894_3 MA3160 MA3710 MA3972_2
        MA4170 MA4174 MA4194 MA4218_1 MA4380_2
  Mth:  MTH1133 MTH1139_2 MTH1241 MTH1549_2 MTH1554 MTH1555 MTH1643_1
        MTH1719 MTH278 MTH399 MTH400 MTH401 MTH405 MTH601_2
        MTH745 MTH772_2 MTH854 MTH926 MTH927
  Mja:  MJ0005_2 MJ0099 MJ0514 MJ0514.1 MJ0514.2 MJ0533 MJ0624
        MJ0934 MJ1166 MJ1167 MJ1193 MJ1303 MJ1351_1
  Mka:  MK0307 MK0323 MK0459 MK0460 MK0461 MK0462 MK0689
        MK0903 MK1001 MK1086_1 MK1243 MK1525 MK1625
  Tac:  Ta0046 Ta0517
  Tvo:  TVN0003 TVN0994
  Pho:  PH0268_3 PH1290
  Pab:  PAB0168_3 PAB0638 PAB1784 PAB3048
  Pya:  PAE0857 PAE2450 PAE2706 PAE2826
  Sso:  SSO1577 SSO2792
  Ape:  APE0320
  Tma:  TM0010_2 TM0049_2 TM0397_1 TM1289 TM1425_2
  Fnu:  FN0444_3
  Dra:  DR1869
  Cac:  CAC0075 CAC0303 CAC0885_1 CAC1513 CAC2543_1 CAC2657 CAC2933_1
        CAC3359_1 CAC3483_1 CAC3527
  Bsu:  BS_yhjQ
  Syn:  slr2059 ssl0563
  Nos:  all0569 all2512_1 alr3008 alr5335 alr7634 asr2513 asr3463
  Eco:  napF napG yfhL
  EcZ:  Z3782 ZnapF ZnapG ZyfhL
  Ecs:  ECs3094 ECs3097 ECs3381 ECs3428
  Ype:  YPO2927 YPO2969 YPO3040
  Sty:  STM1261 STM2258 STM2261 STM2527 STM2548 STM2576
  Vch:  VC0716 VC1516 VCA0676
  Pae:  PA0362 PA1176 PA2107
  Hin:  HI0342 HI0345 HI0527 HI1043
  Pmu:  PM1592 PM1595 PM1758 PM1858
  Xfa:  XF0983
  Nme:  NMB0123
  NmA:  NMA0150
  Rso:  RSc0391 RSc2376 RSp0321
  Hpy:  HP0277
  jHp:  jhp0262
  Cje:  Cj0333c Cj0354c Cj0781 Cj1377c
  Atu:  AGl920
  Sme:  SMa0811 SMa0834 SMa1240 SMc00569 SMc04329
  Mlo:  mll1228 mlr5869 mlr5930 msl8750
_______

[C] COG1146 Ferredoxin
  Afu:  AF0427 AF0470 AF1010 AF1239 AF1461 AF1669
  Hbs:  VNG2496G
  Mac:  MA2911 MA3299_2 MA3595 MA3596
  Mth:  MTH1032 MTH1106 MTH1365 MTH1468 MTH1553 MTH1684_2 MTH194_1
        MTH703
  Mja:  MJ0061 MJ0146 MJ0199 MJ0251 MJ0722 MJ1165 MJ1681_2
  Mka:  MK0358_2 MK0727 MK0860 MK1579
  Tac:  Ta0725 Ta1448m
  Tvo:  TVN0119
  Pab:  PAB0341
  Pya:  PAE2561 PAE2562
  Sso:  SSO2574 SSO8869 SSO8958
  Tma:  TM1175 TM1758 TM1815
  Dra:  DR2330
  Cac:  CAC0105
  Cgl:  Cgl1078 Cgl2895
  Mtu:  Rv0886_1 Rv1177 Rv2007c
  MtC:  MT0909_1 MT1214 MT2063
  Mle:  ML1489 ML2134_1
  Syn:  ssr3184
  Nos:  asl2914
  Eco:  yeiA_2
  EcZ:  ZyeiA_2
  Ecs:  ECs3039_2
  Sty:  STM2187_2
  Vch:  VC0804
  Pae:  PA0439_2 PA2297 PA2715 PA3621
  Xfa:  XF2601
  Rso:  RSc1114 RSp0807
  Hpy:  HP0588
  jHp:  jhp0536
  Cje:  Cj0535
  Atu:  AGc4989 AGl582
  Sme:  SMc01815_2 SMc02347 SMc03875
  Bme:  BMEI0278 BMEI1639_2
  Mlo:  mll1643_2 mlr3855 msr9193
  Ccr:  CC0654
  Rpr:  RP829
  Rco:  RC1283
_______

[C] COG1148 Heterodisulfide reductase, subunit A and related polyferredoxins
  Afu:  AF0662_1 AF0663 AF1238_1 AF1377
  Mac:  MA2868_1 MA3128
  Mth:  MTH1381
  Mja:  MJ1190m
  Mka:  MK0249 MK0265
  Sso:  SSO1131
  Aae:  aq_395
  Tma:  TM1174
_______

[C] COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
  Afu:  AF2380 AF2381
  Mac:  MA4241 MA4242
  Mth:  MTH1173 MTH1174
  Mja:  MJ0578 MJ0579
  Mka:  MK1239 MK1240
  Pho:  PH0982 PH0983
  Pab:  PAB0578 PAB0579
  Tma:  TM1291 TM1292
_______

[C] COG1150 Heterodisulfide reductase, subunit C
  Afu:  AF1376
  Mac:  MA3127 MA4236
  Mth:  MTH1878
  Mja:  MJ0744 MJ0864
  Mka:  MK0573
  Sso:  SSO1127 SSO1134
  Aae:  aq_391 aq_398
_______

[C] COG1151 6Fe-6S prismane cluster-containing protein
  Afu:  AF1849
  Mac:  MA1309 MA3282
  Mth:  MTH1453_2
  Mja:  MJ0728 MJ0765
  Mka:  MK0536
  Pab:  PAB1707
  Tma:  TM1172
  Fnu:  FN0684
  Cac:  CAC0116 CAC2498 CAC2750 CAC3428
  Eco:  ybjW
  EcZ:  ZybjW
  Ecs:  ECs0959
  Ype:  YPO1360
  Sty:  STM0937
_______

[C] COG1152 CO dehydrogenase/acetyl-CoA synthase alpha subunit
  Afu:  AF1100 AF2397
  Mac:  MA1016 MA3860 MA4399
  Mth:  MTH1708
  Mja:  MJ0152_1 MJ0153
  Mka:  MK0717 MK0719
_______

[C] COG1153 Formylmethanofuran dehydrogenase subunit D
  Afu:  AF1928
  Mac:  MA0308 MA0835 MA2879 MA4177
  Mth:  MTH1556 MTH918_2
  Mja:  MJ1168
  Mka:  MK1526
_______

[HI] COG1154 Deoxyxylulose-5-phosphate synthase
  Aae:  aq_881
  Tma:  TM1770
  Fnu:  FN1208 FN1464
  Dra:  DR1475
  Cac:  CAC2077 CAP0106
  Cgl:  Cgl1856
  Mtu:  Rv2682c Rv3379c
  MtC:  MT2756
  Mle:  ML1038
  Lla:  L108911 L123365
  Lin:  lin1402
  Bsu:  BS_yqiE
  Bha:  BH2779
  Syn:  sll1945
  Nos:  alr0599
  Eco:  dxs
  EcZ:  Zdxs
  Ecs:  ECs0474
  Ype:  YPO3177
  Sty:  STM0422
  Buc:  BU464
  Vch:  VC0889
  Pae:  PA4044
  Hin:  HI1439
  Pmu:  PM0532
  Xfa:  XF2249
  Nme:  NMB1867
  NmA:  NMA0589
  Rso:  RSc2221
  Hpy:  HP0354
  jHp:  jhp0328
  Cje:  Cj0321
  Atu:  AGc1351
  Sme:  SMc00972
  Bme:  BMEI1498
  Mlo:  mlr7474
  Ccr:  CC2068
  Ctr:  CT331
  Cpn:  CPn1060
  Tpa:  TP0824
_______

[C] COG1155 Archaeal/vacuolar-type H+-ATPase subunit A
  Afu:  AF1166
  Hbs:  VNG2139G
  Mac:  MA4158
  Mth:  MTH955
  Mja:  MJ0217
  Mka:  MK1017
  Tac:  Ta0004_1 Ta0004_3
  Tvo:  TVN0052_1 TVN0052_3
  Pho:  PH1975_1 PH1975_3
  Pab:  PAB2378_1 PAB2378_3
  Pya:  PAE0663
  Sso:  SSO0563
  Ape:  APE0405
  Sce:  YDL185w_1 YDL185w_3
  Spo:  SPAC343.05
  Ecu:  ECU11g1280i
  Fnu:  FN1735 FN1736
  Dra:  DR0700
  Spy:  SPy0154
  Spn:  SP1317
  Ctr:  CT308
  Cpn:  CPn0088
  Tpa:  TP0426 TP0529
  Bbu:  BB0094
_______

[C] COG1156 Archaeal/vacuolar-type H+-ATPase subunit B
  Afu:  AF1167
  Hbs:  VNG2138G
  Mac:  MA4159
  Mth:  MTH954
  Mja:  MJ0216
  Mka:  MK1673_1 MK1673_3
  Tac:  Ta0005
  Tvo:  TVN0053
  Pho:  PH1974
  Pab:  PAB1186
  Pya:  PAE1146
  Sso:  SSO0564
  Ape:  APE0404
  Sce:  YBR127c
  Spo:  SPAC637.05c
  Ecu:  ECU10g1040
  Fnu:  FN1734
  Dra:  DR0701
  Spy:  SPy0155
  Spn:  SP1316
  Ctr:  CT307
  Cpn:  CPn0089
  Tpa:  TP0427 TP0528
  Bbu:  BB0093
_______

[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase
  Aae:  aq_1595
  Tma:  TM0218
  Cac:  CAC2159
  Lin:  lin0724
  Bsu:  BS_fliI
  Bha:  BH2455
  Eco:  fliI
  EcZ:  Z4194 ZescN ZfliI
  Ecs:  ECs2680 ECs3730 ECs4568
  Ype:  YPCD1.40 YPO0267 YPO0717 YPO1827
  Sty:  STM1415 STM1972 STM2894
  Buc:  BU076
  Vch:  VC2130
  Pae:  PA1104 PA1697
  Rso:  RSp0393 RSp0870
  Hpy:  HP1420
  jHp:  jhp1315
  Cje:  Cj0195
  Atu:  AGc980
  Sme:  SMc03025
  Bme:  BMEII1105
  Mlo:  mlr2909 mlr6342
  Ccr:  CC3040
  Ctr:  CT669 CT717
  Cpn:  CPn0707 CPn0858
  Tpa:  TP0402
  Bbu:  BB0288
_______

[K] COG1158 Transcription termination factor
  Aae:  aq_873
  Tma:  TM1470
  Fnu:  FN0476
  Dra:  DR1338
  Cac:  CAC2889
  Cgl:  Cgl1173_2
  Mtu:  Rv1297_2
  MtC:  MT1336_2
  Mle:  ML1132_2
  Sau:  SA1923
  Lin:  lin2696
  Bsu:  BS_rho
  Bha:  BH3781
  Eco:  rho
  EcZ:  Zrho
  Ecs:  ECs4716
  Ype:  YPO3867
  Sty:  STM3917
  Buc:  BU596
  Vch:  VC0307
  Pae:  PA5239
  Hin:  HI0295
  Pmu:  PM1920
  Xfa:  XF2699
  Nme:  NMB0617
  NmA:  NMA0825
  Rso:  RSc1187
  Hpy:  HP0550
  jHp:  jhp0497
  Cje:  Cj1156
  Atu:  AGc5136
  Sme:  SMc02796
  Bme:  BMEI0003
  Mlo:  mll4485
  Ccr:  CC3760
  Rpr:  RP526
  Rco:  RC0759
  Ctr:  CT491
  Cpn:  CPn0610
  Tpa:  TP0254
  Bbu:  BB0230
_______

[R] COG1159 GTPase
  Aae:  aq_1994
  Tma:  TM0847
  Fnu:  FN0270
  Dra:  DR0646
  Cac:  CAC1295
  Cgl:  Cgl2233
  Mtu:  Rv2364c
  MtC:  MT2433
  Mle:  ML0631
  Lla:  L0155
  Spy:  SPy0476
  Spn:  SP0969
  Sau:  SA1396
  Lin:  lin1499
  Bsu:  BS_bex
  Bha:  BH1367
  Syn:  slr0321
  Nos:  alr0912
  Eco:  era
  EcZ:  Zera
  Ecs:  ECs3432
  Ype:  YPO2719
  Sty:  STM2580
  Buc:  BU257
  Vch:  VC2460
  Pae:  PA0771
  Hin:  HI0013
  Pmu:  PM0060
  Xfa:  XF2247
  Nme:  NMB0687
  NmA:  NMA0889
  Rso:  RSc1064
  Hpy:  HP0517
  jHp:  jhp0466
  Cje:  Cj0661c
  Atu:  AGc1909
  Sme:  SMc02651
  Bme:  BMEI1286
  Mlo:  mlr7766
  Ccr:  CC1562
  Rpr:  RP118
  Rco:  RC0158
  Tpa:  TP0541
  Bbu:  BB0660
  Uur:  UU491
  Mpu:  MYPU_3800
  Mpn:  MPN568
  Mge:  MG387
_______

[R] COG1160 Predicted GTPases
  Aae:  aq_1919
  Tma:  TM0445 TM1446
  Fnu:  FN0170
  Dra:  DR2308
  Cac:  CAC1651 CAC1711
  Cgl:  Cgl1394
  Mtu:  Rv1713
  MtC:  MT1753
  Mle:  ML1372
  Lla:  L0156
  Spy:  SPy0341
  Spn:  SP1709
  Sau:  SA1307
  Lin:  lin2051
  Bsu:  BS_yphC
  Bha:  BH1638
  Syn:  slr1974
  Nos:  alr0483
  Eco:  yfgK
  EcZ:  Z3774
  Ecs:  ECs3373
  Ype:  YPO2875
  Sty:  STM2519
  Buc:  BU607
  Vch:  VC0763
  Pae:  PA3799
  Hin:  HI0136
  Pmu:  PM0105
  Xfa:  XF0465
  Nme:  NMB0852
  NmA:  NMA1063
  Rso:  RSc1219
  Hpy:  HP0834
  jHp:  jhp0773
  Cje:  Cj0386
  Atu:  AGc4180
  Sme:  SMb20995
  Bme:  BMEI1550
  Mlo:  mlr7404
  Ccr:  CC1654
  Rpr:  RP677
  Rco:  RC1030
  Ctr:  CT703
  Cpn:  CPn0844
  Tpa:  TP0689
  Bbu:  BB0508
  Uur:  UU383
  Mpu:  MYPU_0880
  Mpn:  MPN475
  Mge:  MG329
_______

[R] COG1161 Predicted GTPases
  Mac:  MA3404
  Mja:  MJ1464
  Mka:  MK0045
  Pho:  PH0645
  Pab:  PAB0922
  Pya:  PAE0759
  Sso:  SSO0581
  Ape:  APE0105
  Sce:  YER006w YGL099w YMR097c YNR053c YOR205c
  Spo:  SPAC2F7.09c SPAC3F10.16c SPAC6F6.03c SPBC25B2.04c SPBC26H8.08c
  Ecu:  ECU08g0240 ECU08g0330 ECU09g1650
  Tma:  TM0768 TM0848
  Fnu:  FN1072 FN1203
  Cac:  CAC1761
  Lla:  L128951 L22900
  Spy:  SPy0306 SPy1161
  Spn:  SP1155 SP1749
  Sau:  SA1086 SA1425
  Lin:  lin1311 lin1526
  Bsu:  BS_ylqF BS_yqeH
  Bha:  BH1323 BH2476
  Syn:  slr0267
  Nos:  all0745
  Vch:  VCA0528
  Nme:  NMB0739_1
  NmA:  NMA0950
  Bbu:  BB0643
  Uur:  UU468 UU592
  Mpu:  MYPU_3060
  Mpn:  MPN656
  Mge:  MG442
_______

[R] COG1162 Predicted GTPases
  Mac:  MA3445
  Aae:  aq_168 aq_169
  Tma:  TM1717
  Fnu:  FN0679
  Cac:  CAC1729
  Cgl:  Cgl0739
  Mtu:  Rv3228
  MtC:  MT3325
  Mle:  ML0791
  Lla:  L187815
  Spy:  SPy0263
  Spn:  SP1984
  Sau:  SA1064
  Lin:  lin1369 lin1933
  Bsu:  BS_yloQ
  Bha:  BH2503
  Syn:  sll0898
  Nos:  alr2449 alr8077
  Eco:  yjeQ
  EcZ:  ZyjeQ
  Ecs:  ECs5140
  Ype:  YPO0365
  Sty:  STM4349
  Vch:  VC0340
  Pae:  PA4952
  Hin:  HI1714
  Pmu:  PM0899
  Xfa:  XF0556
  Nme:  NMB0263
  NmA:  NMA2224
  Rso:  RSc0940
  Mlo:  mlr1879
  Bbu:  BB0099
  Uur:  UU217
  Mpu:  MYPU_6840
  Mpn:  MPN249
  Mge:  MG110
_______

[R] COG1163 Predicted GTPase
  Afu:  AF2146
  Hbs:  VNG1111G
  Mac:  MA4351
  Mth:  MTH1621
  Mja:  MJ1326
  Mka:  MK1199
  Tac:  Ta1489
  Tvo:  TVN0001
  Pho:  PH1672
  Pab:  PAB2026
  Pya:  PAE1649
  Sso:  SSO2385
  Ape:  APE2052
  Sce:  YAL036c YGR173w
  Spo:  SPAC9.07c SPBC354.01
  Ecu:  ECU05g0410i ECU08g1270i
_______

[E] COG1164 Oligoendopeptidase F
  Hbs:  VNG2001G
  Mac:  MA1870 MA4324
  Tma:  TM0963
  Fnu:  FN0887 FN1145
  Dra:  DR1627 DR2055 DRA0206
  Lla:  L166370
  Spy:  SPy0606 SPy1393
  Spn:  SP0979 SP1780
  Sau:  SA0859 SA1216
  Lin:  lin1528 lin2292
  Bsu:  BS_yjbG BS_yusX
  Bha:  BH0371 BH0871 BH2856
  Vch:  VC1983
  Hpy:  HP0470
  jHp:  jhp0422
  Cje:  Cj1099
  Atu:  AGl2140
  Sme:  SMc04012
  Bme:  BMEII0012
  Mlo:  mlr3002
  Ccr:  CC3313
  Ctr:  CT112
  Cpn:  CPn0136
  Tpa:  TP1026
  Bbu:  BB0248
  Uur:  UU065 UU521
  Mpu:  MYPU_3210
  Mpn:  MPN197
  Mge:  MG183
_______

[H] COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
  Hbs:  VNG1081G
  Cgl:  Cgl0460
  Mtu:  Rv0555
  MtC:  MT0581
  Mle:  ML2270
  Lla:  L0169
  Sau:  SA0896
  Lin:  lin1783
  Bsu:  BS_menD
  Syn:  sll0603
  Nos:  alr0312
  Eco:  menD
  EcZ:  ZmenD
  Ecs:  ECs3152
  Ype:  YPO2527
  Sty:  STM2309
  Vch:  VC1975
  Hin:  HI0283
  Pmu:  PM0054
_______

[E] COG1166 Arginine decarboxylase (spermidine biosynthesis)
  Dra:  DR0243
  Syn:  slr0662 slr1312
  Nos:  all3401
  Eco:  speA
  EcZ:  ZspeA
  Ecs:  ECs3814
  Ype:  YPO0929
  Sty:  STM3086
  Vch:  VCA0815
  Pae:  PA4839
  Pmu:  PM1382
  Xfa:  XF0144
  Nme:  NMB0468
  NmA:  NMA2017
  Hpy:  HP0422
  jHp:  jhp0962
  Cje:  Cj0764c
_______

[KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
  Tac:  Ta1193
  Tvo:  TVN0402
  Pho:  PH0207
  Pab:  PAB2227
  Pya:  PAE0951 PAE2315
  Sso:  SSO0104 SSO3245
  Ape:  APE0169
  Sce:  YER152c YGL202w YHR137w
  Spo:  SPAC56E4.03 SPBC1773.13 SPCC569.07
  Tma:  TM1131
  Fnu:  FN1416 FN1418 FN1462
  Dra:  DR0840 DR1030 DR1579 DR1588 DR1787
  Cac:  CAC2297 CAC3651
  Cgl:  Cgl0241 Cgl0763
  Mtu:  Rv3722c
  MtC:  MT3825
  Mle:  ML2336
  Spy:  SPy1210
  Spn:  SP1393
  Sau:  SA0104 SA0476
  Lin:  lin2204
  Bsu:  BS_ycnF BS_ycxD BS_ydeF BS_ydeL BS_ydfD BS_yhdI BS_yisV
        BS_yisW
  Bha:  BH0432 BH0578 BH1127 BH1940 BH2695
  Nos:  alr4738
  Eco:  ydcR yjiR
  EcZ:  Z2280 Z3973 ZyjiR
  Ecs:  ECs2043 ECs3534 ECs5302
  Ype:  YPO1936 YPO1960 YPO2845
  Sty:  STM1598 STM2436 STM2803
  Vch:  VCA0871
  Pae:  PA0268 PA1654 PA2032 PA2100 PA2897 PA4132 PA4165
        PA5283 PA5431
  Pmu:  PM1231
  Rso:  RSc0030 RSc0229 RSc0599 RSc0985 RSc0989 RSc1857 RSc3119
        RSp1057
  Atu:  AGc3389 AGc3654 AGc398 AGl1192 AGl244
  Sme:  SMb20039 SMb20426 SMb21525 SMc00490 SMc01406 SMc04323
  Bme:  BMEI0169 BMEI0626
  Mlo:  mll0059 mll1817 mll2434 mll5410 mlr1139 mlr1821 mlr6174
        mlr7131 mlr9219
  Ccr:  CC2162 CC3116
_______

[E] COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
  Fnu:  FN0625
  Dra:  DR1452
  Cac:  CAC2970
  Cgl:  Cgl2256
  Mtu:  Rv0075 Rv2294
  MtC:  MT0081 MT2351
  Mle:  ML1794
  Lla:  L177593
  Spn:  SP1524
  Lin:  lin2469
  Bsu:  BS_patB
  Bha:  BH3313
  Eco:  malY
  EcZ:  ZmalY
  Ecs:  ECs2330
  Ype:  YPO3006
  Sty:  STM1557
  Hin:  HI1108
  Rso:  RSc1840
_______

[HQ] COG1169 Isochorismate synthase
  Hbs:  VNG1083G
  Cgl:  Cgl1262
  Mtu:  Rv3215
  MtC:  MT3311
  Mle:  ML0808_2
  Lla:  L0168
  Sau:  SA0895
  Lin:  lin1784
  Bsu:  BS_dhbC BS_menF
  Syn:  slr0817
  Nos:  all0032
  Eco:  entC menF
  EcZ:  ZentC ZmenF
  Ecs:  ECs0632 ECs3153
  Ype:  YPO2528
  Sty:  STM0595 STM2310
  Vch:  VC0773 VC1976
  Pae:  PA4231
  Hin:  HI0285
  Pmu:  PM0053
  Bme:  BMEII0077
_______

[E] COG1171 Threonine dehydratase
  Hbs:  VNG2100G
  Tac:  Ta0113
  Tvo:  TVN0190 TVN1130
  Pya:  PAE2316
  Sso:  SSO0248
  Ape:  APE1498
  Sce:  YCL064c YER086w YKL218c
  Spo:  SPBC1677.03c SPCC320.14
  Tma:  TM0356
  Fnu:  FN1411
  Dra:  DR0567
  Cgl:  Cgl0953 Cgl2076
  Mtu:  Rv1559
  MtC:  MT1610
  Mle:  ML1209
  Lla:  L0081
  Spn:  SP0450
  Sau:  SA1271 SA1866
  Lin:  lin2098
  Bsu:  BS_ilvA
  Bha:  BH1711
  Syn:  slr2072
  Nos:  all0262 alr4232
  Eco:  ilvA tdcB ygeX
  EcZ:  ZilvA ZtdcB ZygeX
  Ecs:  ECs3744 ECs3997 ECs4706
  Ype:  YPO3896 YPO4089
  Sty:  STM1002 STM3244 STM3905
  Vch:  VC0027
  Pae:  PA0331 PA0851 PA1326 PA2683
  Hin:  HI0738.1
  Pmu:  PM1624
  Xfa:  XF1819
  Nme:  NMB0878
  NmA:  NMA1096
  Rso:  RSc0449 RSc0948 RSp1516
  Cje:  Cj0828c
  Atu:  AGc2225 AGc4956 AGl246
  Sme:  SMa1872 SMb20432 SMc00936
  Bme:  BMEI0935
  Mlo:  mll4597 mll7611 mlr0162 mlr3510 mlr7138 mlr7936
  Ccr:  CC3105 CC3635
  Rpr:  RP449
  Rco:  RC0628
_______

[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
  Tma:  TM0112 TM0955
  Fnu:  FN1896 FN1897
  Cgl:  Cgl0031 Cgl1224
  Mle:  ML0397_3
  Lla:  L83296
  Bsu:  BS_rbsC
  Bha:  BH2321 BH3731
  Eco:  alsC araH rbsC ydeY ydeZ yjfF yphD
        ytfT
  EcZ:  Z0418 Z0419 ZaraHm ZrbsC ZydeY ZydeZ ZyjfF
        ZyphD ZytfT
  Ecs:  ECs0377 ECs0378 ECs2121 ECs2122 ECs2606 ECs2607 ECs3412
        ECs4692 ECs5207 ECs5208
  Ype:  YPO0410 YPO0411 YPO0859 YPO0957 YPO1295 YPO1553 YPO1812
        YPO1815 YPO2257 YPO2499 YPO2583 YPO3315 YPO3331 YPO3332
        YPO3635 YPO3636 YPO3905 YPO3906
  Sty:  STM3883 STM4075 STM4076
  Vch:  VCA0129
  Pae:  PA1948
  Hin:  HI0503
  Pmu:  PM0154 PM1250 PM1275 PM1276 PM1327
  Rso:  RSc1015 RSc1243 RSc2756
  Atu:  AGc3488 AGc5111 AGc96 AGl1078 AGl1644 AGl1646 AGl1933
        AGl2024 AGl2025 AGl2593 AGl2595 AGl265 AGl266 AGl2677
        AGl2681 AGl2904 AGl3179 AGl3181 AGl3222 AGl3486 AGl81
        AGl83 AGl989 AGl991 AGpT136
  Sme:  SMa0070 SMa0197 SMa0198 SMa0217 SMa0271 SMa1418 SMa1424
        SMa1995 SMa1996 SMb20015 SMb20016 SMb20315 SMb20318 SMb20352
        SMb20486 SMb20487 SMb20502 SMb20506 SMb20621 SMb20672 SMb20714
        SMb20719 SMb20854 SMb20929 SMb21017 SMb21018 SMb21342 SMb21343
        SMb21375 SMb21423 SMb21589 SMb21590 SMc02019 SMc02031 SMc02170
        SMc02452 SMc02772 SMc03000 SMc03001 SMc03814
  Bme:  BMEI0392 BMEI0664 BMEI1391 BMEII0301 BMEII0302 BMEII0433
  Mlo:  mll1003 mll1013 mll1505 mll1678 mll1679 mll1724_1 mll1727
        mll1920 mll2145 mll4201 mll4202 mll4993 mll5703 mll5704
        mll5769 mll7011 mll7017 mll7018_2 mll7080 mll7365 mll7374
        mll7665 mll8565 mlr1694 mlr1892 mlr1893 mlr2441 mlr3338
        mlr4968 mlr7287 mlr7584 mlr7626 mlr8216
  Ccr:  CC0861
_______

[EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
  Afu:  AF1769
  Hbs:  VNG2346G VNG2361G VNG2531G
  Mac:  MA0300 MA0699 MA0843 MA0880 MA1246 MA1912 MA2480
        MA3050 MA3458 MA3463 MA3907 MA4251 MA4599
  Tac:  Ta0264 Ta0269 Ta1327
  Tvo:  TVN1330
  Pho:  PH0504 PH0809 PH1411 PH1818 PH1960
  Pab:  PAB0093 PAB1195 PAB1345 PAB1873 PAB2363
  Pya:  PAE1298 PAE2392 PAE3086
  Sso:  SSO1275 SSO1283 SSO2617 SSO2671 SSO3047 SSO3059
  Ape:  APE0302 APE1396 APE1581 APE2260
  Aae:  aq_1509
  Tma:  TM0029 TM0059 TM0073 TM0302 TM0502 TM0533 TM1065
        TM1153 TM1197 TM1221 TM1748
  Fnu:  FN0194 FN0398 FN1112 FN1361 FN1502 FN1522 FN1650
  Dra:  DR0365 DR0958 DR1569 DRA0208
  Cac:  CAC0178 CAC2374 CAC3181 CAC3630 CAC3637 CAC3643
  Cgl:  Cgl1946 Cgl2270 Cgl2383 Cgl2601_1
  Mtu:  Rv1282c Rv3664c
  MtC:  MT1319 MT3765
  Mle:  ML1123
  Lla:  L147936 L90358
  Spy:  SPy0295 SPy2002
  Spn:  SP1889
  Sau:  SA0200 SA0846 SA0854 SA1213 SA2253
  Lin:  lin0184 lin0294_2 lin2298
  Bsu:  BS_appC BS_dppC BS_oppC
  Bha:  BH0030 BH0349 BH0569 BH1798 BH2076 BH3637 BH3642
  Syn:  sll0833 slr0324
  Nos:  all2011 all5003 alr1556
  Eco:  ddpC dppC nikC oppC yliD
  EcZ:  Z1056 Z2225 ZdppC ZnikC ZoppC
  Ecs:  ECs0911 ECs1745 ECs2089 ECs4345 ECs4422
  Ype:  YPO2184 YPO2662 YPO3451 YPO4001
  Sty:  STM0851 STM1257 STM1744 STM3628
  Vch:  VC0173 VC0618 VC1093 VCA1100
  Pae:  PA4504
  Hin:  HI1122 HI1186
  Pmu:  PM0238 PM1908
  Rso:  RSc1382 RSc1883 RSc2868
  Hpy:  HP0300
  Cje:  Cj1582c
  Atu:  AGc2211 AGc4571 AGc4691 AGl1208 AGl1324 AGl1477 AGl2741
        AGl2782 AGl2822 AGl2887 AGl3102 AGl3201 AGl321 AGl3516
        AGl3535 AGl366 AGl440 AGl523 AGl692 AGl856 AGl870
        AGpA365 AGpA496 AGpA94 AGpT147 AGpT263
  Sme:  SMa0106 SMa0299 SMa0469 SMa1374 SMa1435 SMa1649 SMa1863
        SMa2083 SMb20110 SMb20142 SMb20478_1 SMb21039 SMb21198 SMb21263
        SMb21645 SMc00788 SMc01527 SMc01644 SMc02028 SMc02419 SMc03128
        SMc03272 SMc04035 SMc04295
  Bme:  BMEI0436 BMEII0201 BMEII0207 BMEII0208 BMEII0221 BMEII0286 BMEII0489
        BMEII0506 BMEII0737 BMEII0861
  Mlo:  mll0598 mll1657 mll2274 mll5124 mll5439 mll7032 mll7245
        mll7349 mll9134 mll9143 mlr0987 mlr1189 mlr3267 mlr3399
        mlr5418 mlr5515 mlr5897 mlr6084 mlr6290 mlr6447 mlr6673
        mlr7599 mlr9213 mlr9273
  Ctr:  CT200 CT478
  Cpn:  CPn0200 CPn0597
  Bbu:  BB0333
  Uur:  UU561
  Mpu:  MYPU_2840 MYPU_4110
  Mpn:  MPN216
  Mge:  MG078
_______

[E] COG1174 ABC-type proline/glycine betaine transport systems, permease component
  Afu:  AF0979 AF0980
  Fnu:  FN2009_1
  Dra:  DRA0136 DRA0138
  Cac:  CAC1473 CAC1476 CAC2849_1
  Mtu:  Rv3756c Rv3757c
  MtC:  MT3863 MT3864
  Lla:  L65675_1
  Spy:  SPy1134_1
  Spn:  SP1860_1
  Sau:  SA0678_1 SA2234 SA2236
  Lin:  lin1461_1 lin1464 lin1466
  Bsu:  BS_opuBB BS_opuBD BS_opuCB BS_opuCD
  Nos:  alr0973
  Eco:  yehW yehY
  EcZ:  ZyehW ZyehY
  Ecs:  ECs3015 ECs3017
  Ype:  YPO1197 YPO1199
  Sty:  STM1492 STM1494 STM2162 STM2164
  Pae:  PA3888 PA3890
  Rso:  RSc2516_2
  Hpy:  HP0818_1
  jHp:  jhp0754 jhp0757_1
  Atu:  AGc332 AGc335
  Sme:  SMa1465 SMa1467 SMb21145 SMb21147
  Bme:  BMEI1726 BMEI1728
  Mlo:  mlr8414 mlr8416
_______

[G] COG1175 ABC-type sugar transport systems, permease components
  Hbs:  VNG6279G
  Tac:  Ta0127 Ta0145 Ta0690
  Tvo:  TVN0206 TVN1144
  Pho:  PH0024 PH0205 PH0754 PH1038 PH1215
  Pab:  PAB0120 PAB2230 PAB2334
  Pya:  PAE0688 PAE1323 PAE3456
  Sso:  SSO1000 SSO1170 SSO2714_1 SSO2848 SSO3067
  Ape:  APE0038 APE1632 APE2253
  Tma:  TM0278 TM0419 TM0431 TM0596 TM0811 TM1121 TM1203
        TM1234 TM1854
  Dra:  DR0562 DR1437
  Cac:  CAC0427 CAC0665 CAC3671
  Cgl:  Cgl0704 Cgl1350 Cgl2407
  Mtu:  Rv1236 Rv2040c Rv2316 Rv2835c
  MtC:  MT1274 MT2100 MT2379 MT2901
  Mle:  ML1087 ML1426 ML1768
  Lla:  L128696
  Spy:  SPy0254 SPy1295 SPy1301
  Spn:  SP1682 SP1689 SP1896 SP2109
  Sau:  SA0208
  Lin:  lin0218 lin0760 lin0853 lin1842 lin2229 lin2971
  Bsu:  BS_amyD BS_araP BS_yesP BS_yurN BS_yvdH BS_yvfL
  Bha:  BH0902 BH1077 BH1118 BH1245 BH1865 BH1925 BH2020
        BH2225 BH2725 BH2925 BH3681 BH3689 BH3846
  Syn:  slr0530 slr1202
  Nos:  alr0738 alr0789 alr2532
  Eco:  malF ugpA ycjO
  EcZ:  ZmalF ZugpA ZycjO
  Ecs:  ECs1890 ECs4298 ECs5016
  Ype:  YPO0613 YPO0855 YPO1722 YPO1894 YPO2476 YPO3471 YPO3715
        YPO3795
  Sty:  STM3556 STM4228
  Vch:  VC1550 VCA0944
  Pae:  PA2339 PA3189
  Pmu:  PM1761
  Xfa:  XF2447
  Rso:  RSc1265 RSc2143 RSc3048
  Atu:  AGc1048 AGc2593 AGc4553 AGc4717 AGc531 AGc686 AGl1012
        AGl1220 AGl1295 AGl1775 AGl1909 AGl2943 AGl2963 AGl3068
        AGl3156 AGl3247 AGl3272 AGl3284 AGl3320 AGl3351 AGl3390
        AGl3415 AGl3422 AGl458 AGl623 AGl839 AGpA117 AGpA377
        AGpA586 AGpA678 AGpA78
  Sme:  SMa0710 SMa1339 SMa1363 SMa2307 SMb20232 SMb20326 SMb20417
        SMb20633 SMb20659 SMb20970 SMb21104 SMb21149 SMb21220 SMb21459
        SMb21594 SMb21603 SMb21653 SMc01497 SMc01627 SMc01978 SMc02472
        SMc02517 SMc02872 SMc03062 SMc04136 SMc04258 SMc04395
  Bme:  BMEI1715 BMEII0113 BMEII0482 BMEII0483 BMEII0591 BMEII0624 BMEII0753
        BMEII0943 BMEII0944
  Mlo:  mll0705 mll0853 mll1715 mll3316 mll3383 mll3502 mll3589
        mll4147 mll4925 mll5112 mll5301 mll7153 mll8487 mlr2245
        mlr2327 mlr3052 mlr3640 mlr4772 mlr4912 mlr6436 mlr6652
        mlr7001 mlr7093 mlr7226 mlr7264
  Tpa:  TP0075
  Mpu:  MYPU_0270 MYPU_1010 MYPU_4980 MYPU_6390_2
  Mpn:  MPN135
  Mge:  MG188
_______

[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I
  Afu:  AF1607
  Hbs:  VNG1868G
  Pya:  PAE2891
  Ape:  APE0943
  Tma:  TM1377
  Fnu:  FN1798
  Dra:  DR1303
  Cac:  CAC0839
  Lla:  L176724
  Spy:  SPy1103
  Spn:  SP1388
  Sau:  SA0951
  Lin:  lin0798
  Nos:  all5042
  Eco:  potB potH ydcU
  EcZ:  Z2277 ZpotB ZpotH
  Ecs:  ECs0936 ECs1570 ECs2046
  Ype:  YPO1333 YPO2031 YPO2842
  Sty:  STM0879 STM1225
  Vch:  VC1427
  Pae:  PA0205 PA0303 PA0325 PA0605 PA3608
  Hin:  HI1346
  Pmu:  PM0263
  Nme:  NMB0611
  NmA:  NMA0817
  Rso:  RSc1732
  Atu:  AGc1087 AGl1234 AGl3445 AGl602 AGl889 AGpA352 AGpA600
        AGpA616
  Sme:  SMa0394 SMa0800 SMa0952 SMa1753 SMa2205 SMb20283 SMb20382
        SMb21274 SMc00772 SMc01633 SMc01654 SMc01964
  Bme:  BMEI0413 BMEII0194 BMEII0921
  Mlo:  mll0234 mll1740 mll2888 mll2950 mll6253_1 mll7186 mll8443
        mlr2021 mlr3664 mlr4191 mlr5383 mlr6080_1 mlr6536 mlr6966
        mlr7380 mlr7544 mlr7677 mlr9015 mlr9379
  Ccr:  CC3136
  Tpa:  TP0653
  Bbu:  BB0641
  Uur:  UU108
  Mpu:  MYPU_4240
  Mpn:  MPN056
  Mge:  MG043
_______

[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II
  Afu:  AF1606
  Hbs:  VNG1867G
  Pya:  PAE2893
  Ape:  APE0941
  Tma:  TM1378
  Fnu:  FN1799
  Dra:  DR1304
  Cac:  CAC0838
  Lla:  L177493
  Spy:  SPy1104
  Spn:  SP1387
  Sau:  SA0952
  Lin:  lin0799
  Nos:  alr1334
  Eco:  potC potI ydcV
  EcZ:  Z2276 ZpotC ZpotI
  Ecs:  ECs0937 ECs1500 ECs2047
  Ype:  YPO1334 YPO2030 YPO2841
  Sty:  STM0426 STM0880 STM1223
  Vch:  VC1426
  Pae:  PA0204 PA0304 PA0324 PA0606 PA3253 PA3609
  Hin:  HI1345
  Pmu:  PM0262
  Nme:  NMB0612
  NmA:  NMA0818
  Rso:  RSc1731 RSc1793
  Cje:  Cj0731
  Atu:  AGc1089 AGc3893 AGl1232 AGl3448 AGl601 AGl888 AGpA189
        AGpA349 AGpA602 AGpA618
  Sme:  SMa0396 SMa0802 SMa0951 SMa1751 SMa2203 SMb20282 SMb20381
        SMb21275 SMc00773 SMc01607 SMc01634 SMc01655 SMc01963
  Bme:  BMEI0414 BMEII0195 BMEII0484 BMEII0920 BMEII1122
  Mlo:  mll0233 mll1739 mll2887 mll2949 mll3067 mll6253_2 mll7185
        mll8442 mlr2022 mlr3665 mlr4192 mlr5384 mlr6080_2 mlr6537
        mlr6967 mlr7381 mlr7545 mlr7678 mlr9016 mlr9382
  Ccr:  CC3135
  Tpa:  TP0654
  Bbu:  BB0640
  Uur:  UU109
  Mpu:  MYPU_4230
  Mpn:  MPN057
  Mge:  MG044
_______

[P] COG1178 ABC-type Fe3+ transport system, permease component
  Hbs:  VNG0923G VNG2396G
  Pho:  PH1352
  Pab:  PAB0543
  Pya:  PAE0062 PAE0329
  Ape:  APE1730
  Fnu:  FN0309 FN0377
  Dra:  DR2488
  Cgl:  Cgl0422
  Spn:  SP1824
  Bha:  BH0514
  Syn:  sll0238 slr0327
  Nos:  alr1383
  Eco:  afuB thiP
  EcZ:  ZafuB ZyabK
  Ecs:  ECs0071 ECs0414
  Ype:  YPO0521 YPO2959 YPO3049
  Sty:  STM0107
  Vch:  VC0609 VC2538 VCA0601 VCA0686
  Pae:  PA4688 PA5216
  Hin:  HI0098 HI0129 HI1020
  Pmu:  PM0050 PM0377 PM0956 PM1455
  Nme:  NMB0633 NMB2026
  NmA:  NMA0414 NMA0843
  Rso:  RSc2938
  Cje:  Cj0174c
  Atu:  AGc1092 AGc3651 AGc4917 AGc717 AGl194 AGl586
  Sme:  SMa0525 SMb20155 SMb20364 SMb21542 SMc00775 SMc03870 SMc04316
  Bme:  BMEI0284 BMEII0566 BMEII0585
  Mlo:  mll3625 mll3865 mlr3497
  Tpa:  TP0143
_______

[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
  Sce:  YHR003c YKL027w
  Spo:  SPAC1A6.10
  Fnu:  FN0725
  Cac:  CAC0908
  Sau:  SA1455
  Bsu:  BS_yrvM
  Bha:  BH1255
  Eco:  ygdL
  EcZ:  ZygdL
  Ecs:  ECs3672
  Ype:  YPO1026
  Sty:  STM2987
  Vch:  VC2311
  Pae:  PA1164
  Hin:  HI0118
  Pmu:  PM0927
  Xfa:  XF1545
  Nme:  NMB1501
  NmA:  NMA1704
  Rso:  RSc0774
  Hpy:  HP0755
  jHp:  jhp0692
  Cje:  Cj0294
_______

[O] COG1180 Pyruvate-formate lyase-activating enzyme
  Afu:  AF0117 AF1330 AF1450 AF2278
  Mac:  MA0071 MA1204_1 MA3448 MA3482 MA4534_1
  Mth:  MTH1395 MTH1586 MTH345 MTH976
  Mja:  MJ0808 MJ1227
  Mka:  MK0047 MK0187 MK0286 MK0952 MK1027
  Tac:  Ta0248
  Tvo:  TVN1352
  Pho:  PH0020 PH1391
  Pab:  PAB1859 PAB2338
  Pya:  PAE2451 PAE3184 PAE3672
  Sso:  SSO0653
  Ape:  APE1007 APE1865
  Aae:  aq_1861
  Tma:  TM1237 TM1552
  Fnu:  FN0261
  Cac:  CAC0981 CAC1421
  Mtu:  Rv3138
  MtC:  MT3225
  Lla:  L63811
  Spy:  SPy0379 SPy2055
  Spn:  SP0245 SP1976
  Sau:  SA0219
  Lin:  lin1444
  Eco:  pflA pflC ybiY yjjW
  EcZ:  ZpflA ZpflC ZybiY ZyjjW
  Ecs:  ECs0902 ECs0985 ECs4881 ECs5337
  Ype:  YPO1381
  Sty:  STM0844 STM0970 STM4115 STM4565
  Vch:  VC1869
  Pae:  PA1919
  Hin:  HI0179 HI0520
  Pmu:  PM0077
  Rso:  RSp0965
_______

[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes
  Mac:  MA4352_2
  Aae:  aq_521
  Tma:  TM0259
  Fnu:  FN1454
  Dra:  DR0362
  Cac:  CAC1540 CAC2895
  Cgl:  Cgl1289
  Mtu:  Rv2981c
  MtC:  MT3059
  Mle:  ML1678
  Lla:  L140690
  Spy:  SPy1421
  Spn:  SP1671
  Sau:  SA1887
  Lin:  lin0848 lin2913_2
  Bsu:  BS_ddlA
  Bha:  BH1621 BH3653_1 BH3654_1 BH3655_1
  Syn:  slr1874 slr2002_1
  Nos:  all0980 all3879_1 alr0573 alr1779
  Eco:  ddlA ddlB
  EcZ:  Z0477 ZddlB
  Ecs:  ECs0096 ECs0431
  Ype:  YPO0557
  Sty:  STM0130 STM0380
  Vch:  VCA0572
  Pae:  PA3460_2 PA4201 PA4410
  Hin:  HI1140
  Pmu:  PM0144 PM1048_2
  Xfa:  XF0799
  Nme:  NMB0424
  NmA:  NMA2060
  Rso:  RSc2842
  Hpy:  HP0738
  jHp:  jhp0675
  Cje:  Cj0798c
  Atu:  AGc3788
  Sme:  SMb20482_2 SMc01871
  Bme:  BMEI0582 BMEI0727
  Mlo:  mll1551 mll1812
  Ccr:  CC2543
  Rpr:  RP249
  Rco:  RC0333
  Ctr:  CT762_2
  Cpn:  CPn0905_2
  Tpa:  TP0670
  Bbu:  BB0200
_______

[I] COG1182 Acyl carrier protein phosphodiesterase
  Cac:  CAC0604 CAC3421
  Lla:  L115551 L186107
  Sau:  SA0204
  Lin:  lin0620 lin0779
  Bsu:  BS_yocJ BS_yvaB
  Bha:  BH1967 BH3860 BH4043
  Nos:  all2105
  Eco:  acpD
  EcZ:  ZacpD
  Ecs:  ECs2014
  Ype:  YPO2323
  Sty:  STM1642
  Pae:  PA0785 PA1962 PA3223
  Hin:  HI1366
  Rso:  RSp1258
  Atu:  AGc2230
  Sme:  SMc01329
  Mlo:  mlr2421
  Mpu:  MYPU_3120
  Mpn:  MPN479
  Mge:  MG333m
_______

[I] COG1183 Phosphatidylserine synthase
  Afu:  AF2044
  Hbs:  VNG0784G
  Mac:  MA0116
  Mth:  MTH1027
  Mja:  MJ1212
  Mka:  MK0161
  Sce:  YER026c
  Spo:  SPCC1442.12
  Fnu:  FN0991
  Cac:  CAC0676 CAC0798
  Mtu:  Rv0436c
  MtC:  MT0452
  Mle:  ML0310
  Bsu:  BS_pssA
  Bha:  BH1310
  Pae:  PA3857 PA4693
  Xfa:  XF0442
  Nme:  NMB1318
  NmA:  NMA1532
  Rso:  RSc2073
  Hpy:  HP1071
  jHp:  jhp0354
  Cje:  Cj1114c
  Atu:  AGc1962 AGc3299
  Sme:  SMc00247 SMc00552
  Bme:  BMEI1490 BMEII0695
  Mlo:  mll0506 mlr5886 mlr7822
  Rpr:  RP242
  Rco:  RC0326
  Ctr:  CT826
  Cpn:  CPn0983
  Bbu:  BB0249
_______

[J] COG1184 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
  Afu:  AF2037
  Hbs:  VNG1452G VNG1853G
  Mac:  MA0379
  Mja:  MJ0122
  Tac:  Ta0910
  Tvo:  TVN0949
  Pho:  PH0208 PH0440
  Pab:  PAB1306 PAB2402
  Pya:  PAE1244
  Ape:  APE1047
  Sce:  YGR083c_2 YKR026c YLR291c
  Spo:  SPAC21E11.06 SPAC343.14c SPCC11E10.07c
  Tma:  TM1440
_______

[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
  Sce:  YER013w_1
  Spo:  SPAC10F6.02c_1
  Aae:  aq_221
  Tma:  TM1345
  Fnu:  FN1708
  Dra:  DR2063
  Cac:  CAC1808
  Cgl:  Cgl1929
  Mtu:  Rv2783c
  MtC:  MT2853
  Mle:  ML0854
  Lla:  L0325
  Spy:  SPy1946
  Spn:  SP0588
  Sau:  SA1117
  Lin:  lin1368
  Bsu:  BS_pnpA
  Bha:  BH2407
  Syn:  sll1043
  Nos:  all4396
  Eco:  pnp
  EcZ:  Zpnp
  Ecs:  ECs4045
  Ype:  YPO3490
  Sty:  STM3282
  Buc:  BU373
  Vch:  VC0647
  Pae:  PA4740
  Hin:  HI0229
  Pmu:  PM1114
  Xfa:  XF0239
  Nme:  NMB0758
  NmA:  NMA0969
  Rso:  RSc2067
  Hpy:  HP1213
  jHp:  jhp1136
  Cje:  Cj1253
  Atu:  AGc124
  Sme:  SMc00324
  Bme:  BMEI1961
  Mlo:  mlr5562
  Ccr:  CC0034
  Rpr:  RP504
  Rco:  RC0663
  Ctr:  CT842
  Cpn:  CPn0999
  Tpa:  TP0886
  Bbu:  BB0805
_______

[J] COG1186 Protein chain release factor B
  Sce:  YLR281c YOL114c
  Spo:  SPAC589.11
  Aae:  aq_1840
  Tma:  TM1579
  Fnu:  FN1341
  Dra:  DR0173
  Cac:  CAC2845 CAC3384
  Cgl:  Cgl0778
  Mtu:  Rv3105c
  MtC:  MT3188
  Mle:  ML0667
  Lla:  L0374
  Spy:  SPy0643
  Sau:  SA0709
  Lin:  lin2653
  Bsu:  BS_prfB
  Bha:  BH3605
  Syn:  sll1865
  Nos:  all0273 alr4696
  Eco:  prfB prfH yaeJ
  EcZ:  ZprfB ZprfH ZyaeJ
  Ecs:  ECs0193 ECs0263 ECs3763
  Ype:  YPO0889 YPO1066
  Sty:  STM0240 STM0315 STM3041
  Buc:  BU436
  Vch:  VC0663
  Pae:  PA0868 PA5470
  Hin:  HI1212
  Pmu:  PM0190
  Xfa:  XF1111
  Nme:  NMB2138
  NmA:  NMA0224
  Rso:  RSc1030 RSp0699
  Hpy:  HP0171
  jHp:  jhp0157
  Cje:  Cj1455
  Atu:  AGc2479 AGc57
  Sme:  SMc01333 SMc02563
  Bme:  BMEI1054 BMEI2038
  Mlo:  mlr0216 mlr5097
  Ccr:  CC1214 CC1874
  Rpr:  RP274
  Rco:  RC0368
  Ctr:  CT459
  Cpn:  CPn0575a
  Tpa:  TP0576
  Bbu:  BB0074
_______

[J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases
  Aae:  aq_1464 aq_554
  Tma:  TM0264
  Fnu:  FN0717 FN0756
  Dra:  DR0896
  Cac:  CAC1851 CAC2676
  Cgl:  Cgl1392
  Mtu:  Rv1711
  MtC:  MT1751.1
  Mle:  ML1370
  Lla:  L107724 L109527 L189881
  Spy:  SPy0369 SPy1337 SPy1398
  Spn:  SP0280 SP0680 SP1874
  Sau:  SA1324 SA1574
  Lin:  lin2063 lin2436
  Bsu:  BS_ypuL BS_ytzF BS_ytzG
  Bha:  BH1576 BH3273
  Syn:  slr0361 slr0612
  Nos:  all3873 alr0545
  Eco:  rsuA yciL yjbC ymfC
  EcZ:  ZrsuA ZyciL ZyjbC ZymfC
  Ecs:  ECs1607 ECs1841 ECs3075 ECs5005
  Ype:  YPO1266 YPO1640 YPO2213
  Sty:  STM1237 STM1719 STM2222 STM4193
  Buc:  BU282
  Vch:  VC1140 VC1179 VC1635 VC2223
  Pae:  PA0733 PA1110 PA3179 PA3968
  Hin:  HI0694 HI1199 HI1243
  Pmu:  PM0003 PM0661 PM1605
  Xfa:  XF1200 XF2453
  Nme:  NMB0806 NMB1298 NMB1361 NMB1496
  NmA:  NMA1016 NMA1508 NMA1573
  Rso:  RSc0674 RSc1286 RSc1401_2
  Hpy:  HP1459
  jHp:  jhp1352
  Cje:  Cj1709c
  Atu:  AGc1238
  Sme:  SMb20024 SMc00904
  Bme:  BMEII1039
  Mlo:  mlr2177 mlr8253
  Ccr:  CC0230 CC0855 CC1838
  Rpr:  RP544
  Rco:  RC0807
  Ctr:  CT723
  Cpn:  CPn0864
  Tpa:  TP0459
  Bbu:  BB0129
  Mpu:  MYPU_3370
_______

[J] COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
  Tma:  TM0223
  Fnu:  FN0020
  Cac:  CAC3210
  Cgl:  Cgl2072
  Lla:  L1001
  Spy:  SPy0009
  Spn:  SP0007
  Sau:  SA0464
  Lin:  lin0248
  Bsu:  BS_yabO
  Bha:  BH0073
  Eco:  yrfH
  EcZ:  ZyrfH
  Ecs:  ECs4242
  Ype:  YPO0140
  Sty:  STM3497
  Vch:  VC2735
  Pae:  PA5195
  Hin:  HI0562
  Pmu:  PM1546
  Nme:  NMB1138 NMB1176
  NmA:  NMA1348
  Rso:  RSc2642
  Hpy:  HP1423
  jHp:  jhp1318
  Cje:  Cj0667
  Atu:  AGc4991
  Sme:  SMc03876
  Bme:  BMEI0277
  Mlo:  mlr3853
  Ccr:  CC0656
_______

[J] COG1189 Predicted rRNA methylase
  Afu:  AF2184
  Mac:  MA2004
  Aae:  aq_773
  Tma:  TM1576
  Fnu:  FN1206
  Cac:  CAC2076
  Cgl:  Cgl1378
  Mtu:  Rv1694
  MtC:  MT1733
  Mle:  ML1358
  Lla:  L81441
  Spy:  SPy1497
  Spn:  SP1204
  Lin:  lin1403
  Bsu:  BS_yqxC
  Bha:  BH2778
  Syn:  slr0950
  Nos:  all0906
  Hpy:  HP1086
  jHp:  jhp0339
  Cje:  Cj0588
  Atu:  AGc1334
  Sme:  SMc00973
  Bme:  BMEI1497
  Mlo:  mlr7477
  Ccr:  CC1324
  Rpr:  RP555
  Rco:  RC0822
  Bbu:  BB0506
  Uur:  UU436
  Mpu:  MYPU_1710
_______

[J] COG1190 Lysyl-tRNA synthetase (class II)
  Mac:  MA0760
  Pya:  PAE1840
  Sso:  SSO0090
  Sce:  YDR037w YNL073w
  Spo:  SPBC17G9.03c SPCC18.08
  Ecu:  ECU04g0580
  Aae:  aq_1202
  Tma:  TM1705
  Fnu:  FN0466
  Dra:  DR0372
  Cac:  CAC3197
  Cgl:  Cgl2631
  Mtu:  Rv1640c_2 Rv3598c
  MtC:  MT1678_2 MT3705
  Mle:  ML0233 ML1393_2
  Lla:  L0347 L129283_2
  Spy:  SPy0595
  Spn:  SP0713
  Sau:  SA0475
  Lin:  lin0260
  Bsu:  BS_lysS
  Bha:  BH0098
  Syn:  slr1550
  Nos:  all4071
  Eco:  lysS lysU
  EcZ:  ZlysS ZlysU
  Ecs:  ECs3762 ECs5111
  Ype:  YPO0888
  Sty:  STM3040
  Buc:  BU437
  Vch:  VC0664
  Pae:  PA3700
  Hin:  HI1211
  Pmu:  PM0189
  Xfa:  XF1112
  Nme:  NMB1425
  NmA:  NMA1638
  Rso:  RSc1028
  Hpy:  HP0182
  jHp:  jhp0170
  Cje:  Cj0401
  Atu:  AGl794
  Sme:  SMc03173
  Ctr:  CT781
  Cpn:  CPn0931
  Uur:  UU062
  Mpu:  MYPU_3900 MYPU_4020
  Mpn:  MPN277
  Mge:  MG136
_______

[K] COG1191 DNA-directed RNA polymerase specialized sigma subunit
  Aae:  aq_1218
  Tma:  TM0902
  Cac:  CAC1226 CAC1689 CAC1695 CAC1696 CAC1770 CAC2143 CAC2306
  Mtu:  Rv3286c
  MtC:  MT3385
  Sau:  SA1869
  Lin:  lin0894
  Bsu:  BS_sigB BS_sigD BS_sigE BS_sigF BS_sigG BS_spoIIIC BS_spoIVCB
        BS_ykoZ
  Bha:  BH0529 BH1285 BH1538 BH2431 BH2554 BH2556
  Syn:  slr1564
  Nos:  all3853 alr0277
  Eco:  fliA
  EcZ:  ZfliA
  Ecs:  ECs2661
  Ype:  YPO0745 YPO1843
  Sty:  STM1956
  Vch:  VC2066
  Pae:  PA1455
  Rso:  RSp1390
  Hpy:  HP1032
  jHp:  jhp0392
  Cje:  Cj0061c
  Ctr:  CT061
  Cpn:  CPn0362
  Tpa:  TP0709
_______

[D] COG1192 ATPases involved in chromosome partitioning
  Hbs:  VNG6010G VNG6034G VNG6086G VNG6123G VNG6153G VNG6225C VNG6337G
        VNG7008 VNG7029 VNG7065 VNG7087 VNG7144
  Mth:  MTH1456
  Mja:  MJECL24
  Mka:  MK0309 MK1262
  Tvo:  TVN1480
  Pho:  PH0768
  Pab:  PAB0852
  Pya:  PAE0153 PAE1775 PAE3244 PAE3393
  Sso:  SSO0034 SSO1294 SSO2331 SSO2332 SSO2336 SSO2475 SSO2492
  Aae:  aq_1404 aq_aa35
  Dra:  DR0013 DR1685 DR2040 DRA0001 DRB0001 DRB0031 DRC0025
  Cac:  CAC0037 CAC3730 CAP0177
  Cgl:  Cgl1387 Cgl3035
  Mtu:  Rv1708 Rv3213c Rv3918c
  MtC:  MT1749 MT3309 MT4037
  Mle:  ML1367 ML2707
  Lin:  lin2923 pli0069
  Bsu:  BS_soj
  Bha:  BH4058
  Syn:  slr0105 slr0110 slr0929 slr1597
  Nos:  all1075 all4764 alr1113 alr3222 alr7082 alr7581 alr8006
        alr8562 alr9026
  Eco:  yhjQ
  EcZ:  Z4950m
  Ecs:  ECs4414
  Ype:  YPCD1.13c YPMT1.68c
  Sty:  PSLT052 STM3620
  Vch:  VC2061 VC2773 VCA1115
  Pae:  PA1462 PA5028 PA5563
  Xfa:  XF1084 XF1785 XF2282 XFa0060
  Nme:  NMB0191
  NmA:  NMA0076
  Rso:  RSc2389 RSc2605 RSc3326 RSp0003
  Hpy:  HP1000 HP1139
  jHp:  jhp0935 jhp1067
  Cje:  Cj0100
  Atu:  AGc3875 AGc5130 AGl1843 AGpA1 AGpT18 AGpT93
  Sme:  SMa2395 SMb20046 SMb20598 SMc01579 SMc02800
  Bme:  BMEI0009 BMEII0093
  Mlo:  mll4479 mll9353 mll9654 mlr9294
  Ccr:  CC1537 CC2165 CC3753
  Rpr:  RP058 RP143
  Rco:  RC0086 RC0185
  Ctr:  CT582
  Cpn:  CPn0805
  Tpa:  TP0272
  Bbu:  BB0431 BBA20 BBB12 BBD21 BBE19 BBF13 BBF24
        BBG08 BBH28 BBI21 BBJ17 BBK21 BBL32 BBM32
        BBN32 BBO32 BBP32 BBQ08 BBQ40 BBR33 BBS35
        BBU05
  Mpn:  MPN688
  Mge:  MG470
_______

[L] COG1193 Mismatch repair ATPase (MutS family)
  Hbs:  VNG2270G
  Mac:  MA0080
  Mth:  MTH1762
  Pho:  PH0442
  Pab:  PAB1307
  Aae:  aq_1242
  Tma:  TM1278
  Fnu:  FN1581 FN1864
  Dra:  DR1976
  Cac:  CAC2340 CAP0099
  Lla:  L0293
  Spy:  SPy1837
  Spn:  SP0406
  Sau:  SA0991
  Lin:  lin1195
  Bsu:  BS_yshD
  Bha:  BH0376 BH3106
  Syn:  sll1772
  Nos:  all0049
  Hpy:  HP0621
  jHp:  jhp0565
  Cje:  Cj1052c
  Bbu:  BB0098
_______

[L] COG1194 A/G-specific DNA glycosylase
  Hbs:  VNG1520G
  Mth:  MTH496
  Pya:  PAE3199
  Ape:  APE0875
  Spo:  SPAC26A3.02
  Dra:  DR2285
  Cac:  CAC1499
  Cgl:  Cgl2617
  Mtu:  Rv3589
  MtC:  MT3695
  Mle:  ML1920
  Lla:  L0296
  Spy:  SPy1833
  Spn:  SP1228
  Sau:  SA1685
  Lin:  lin1797
  Bsu:  BS_yfhQ_1 BS_yfhQ_2
  Bha:  BH0931
  Eco:  mutY
  EcZ:  ZmutY
  Ecs:  ECs3837
  Ype:  YPO0952
  Sty:  STM3110
  Buc:  BU552
  Vch:  VC0452
  Pae:  PA5147
  Hin:  HI0759
  Pmu:  PM1319
  Xfa:  XF1909
  Nme:  NMB1396
  NmA:  NMA1614
  Rso:  RSc0401
  Hpy:  HP0142
  jHp:  jhp0130
  Cje:  Cj1620c
  Atu:  AGc1460
  Sme:  SMc00452
  Bme:  BMEI1442
  Mlo:  mll7523
  Ccr:  CC0377
  Ctr:  CT107
  Cpn:  CPn0402
  Tpa:  TP0343
_______

[L] COG1195 Recombinational DNA repair ATPase (RecF pathway)
  Pya:  PAE1060
  Fnu:  FN2128
  Dra:  DR1089
  Cac:  CAC0004
  Cgl:  Cgl0003
  Mtu:  Rv0003
  MtC:  MT0003
  Mle:  ML0003
  Lla:  L0261
  Spy:  SPy2204
  Spn:  SP2227
  Sau:  SA0004
  Lin:  lin0005
  Bsu:  BS_recF
  Bha:  BH0004
  Syn:  sll1277
  Nos:  all3374
  Eco:  recF
  EcZ:  ZrecF
  Ecs:  ECs4635
  Ype:  YPO4095
  Sty:  STM3836
  Vch:  VC0014
  Pae:  PA0003
  Hin:  HI0991
  Pmu:  PM1159
  Xfa:  XF0003
  Atu:  AGc109
  Sme:  SMc02863
  Bme:  BMEI1941
  Mlo:  mll5578
  Ccr:  CC0159
  Rpr:  RP029
  Rco:  RC0032
  Ctr:  CT074
  Tpa:  TP0003
_______

[D] COG1196 Chromosome segregation ATPases
  Afu:  AF1558
  Hbs:  VNG0342G
  Mac:  MA4334
  Mja:  MJ1643
  Tac:  Ta0787
  Tvo:  TVN0807
  Pho:  PH1798
  Pab:  PAB2109
  Sce:  YFL008w YFR031c YJL074c YLR086w YLR383w YOL034w
  Spo:  SPAC10F6.09c SPAC14C4.02c SPBC146.03c SPBC29A10.04 SPBP4H10.06c SPCC5E4.06
  Ecu:  ECU01g1160 ECU04g0930 ECU07g0390 ECU07g0680 ECU09g1910 ECU11g2000
  Aae:  aq_629
  Tma:  TM1182
  Fnu:  FN1129
  Dra:  DR1471
  Cac:  CAC1751
  Cgl:  Cgl2015
  Mtu:  Rv2922c
  MtC:  MT2990
  Mle:  ML1629
  Lla:  L10155 L12942
  Spy:  SPy0532
  Spn:  SP1247
  Sau:  SA1077
  Lin:  lin1918
  Bsu:  BS_smc
  Bha:  BH2487
  Syn:  sll1120
  Nos:  alr1128
  Pae:  PA1527
  Xfa:  XF2558
  Nme:  NMB0545
  NmA:  NMA0724
  Atu:  AGc1466
  Sme:  SMc00024
  Bme:  BMEI1439
  Mlo:  mlr7527
  Ccr:  CC0373
  Tpa:  TP0367
  Bbu:  BB0045
  Uur:  UU140
  Mpu:  MYPU_7140
  Mpn:  MPN426
  Mge:  MG298
_______

[LK] COG1197 Transcription-repair coupling factor (superfamily II helicase)
  Tma:  TM1450
  Fnu:  FN0019
  Dra:  DR1532
  Cac:  CAC3216
  Cgl:  Cgl0938
  Mtu:  Rv1020
  MtC:  MT1048
  Mle:  ML0252
  Lla:  L0263
  Spy:  SPy0008
  Spn:  SP0006
  Sau:  SA0461
  Lin:  lin0246
  Bsu:  BS_mfd
  Bha:  BH0069
  Syn:  sll0377
  Nos:  all5215
  Eco:  mfd
  EcZ:  Zmfd
  Ecs:  ECs1492
  Ype:  YPO1625
  Sty:  STM1216
  Buc:  BU294
  Vch:  VC1886
  Pae:  PA3002
  Hin:  HI1258
  Pmu:  PM1041
  Xfa:  XF0045
  Nme:  NMB1281
  NmA:  NMA1491
  Rso:  RSc1642
  Hpy:  HP1541
  jHp:  jhp1458
  Cje:  Cj1085c
  Atu:  AGc3270
  Sme:  SMc04450
  Bme:  BMEII0688
  Mlo:  mll0827
  Ccr:  CC1844
  Rpr:  RP598
  Rco:  RC0913
  Ctr:  CT748
  Cpn:  CPn0891
  Tpa:  TP0344
  Bbu:  BB0623
_______

[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase
  Aae:  aq_1761
  Tma:  TM0178
  Fnu:  FN1156
  Dra:  DR2606
  Cac:  CAC1721
  Cgl:  Cgl1564
  Mtu:  Rv1402
  MtC:  MT1446
  Mle:  ML0548
  Lla:  L0292
  Spy:  SPy1629
  Spn:  SP1736
  Sau:  SA1055
  Lin:  lin1938
  Bsu:  BS_priA
  Bha:  BH2509
  Syn:  sll0270
  Nos:  all4248
  Eco:  priA
  EcZ:  ZpriA
  Ecs:  ECs4862
  Ype:  YPO0110
  Sty:  STM4095
  Buc:  BU120
  Vch:  VC2678
  Pae:  PA5050
  Hin:  HI0339
  Pmu:  PM1137
  Xfa:  XF2689
  Nme:  NMB0551
  NmA:  NMA0731
  Rso:  RSc3302
  Hpy:  HP0387
  jHp:  jhp0994
  Cje:  Cj0684
  Atu:  AGc4763
  Sme:  SMc02496
  Bme:  BMEI0245 BMEI0246
  Mlo:  mll4071
  Ccr:  CC0346
  Rpr:  RP540
  Rco:  RC0800
  Ctr:  CT778
  Cpn:  CPn0924
  Tpa:  TP0230
  Bbu:  BB0014
_______

[KL] COG1199 Rad3-related DNA helicases
  Hbs:  VNG1383G VNG2441G VNG2476C
  Mac:  MA0335 MA2096
  Mth:  MTH1347
  Mja:  MJ0942
  Tac:  Ta0057m
  Tvo:  TVN0013
  Pho:  PH0697
  Pab:  PAB2385
  Pya:  PAE2991 PAE3526
  Sso:  SSO0313
  Ape:  APE0322
  Sce:  YER171w YPL008w
  Spo:  SPAC1D4.12 SPAC3G6.11
  Ecu:  ECU02g1090 ECU06g0200 ECU08g1120
  Aae:  aq_358
  Fnu:  FN0743
  Cac:  CAC1672
  Cgl:  Cgl2468
  Mtu:  Rv1329c
  MtC:  MT1371
  Lla:  L0284_2
  Spy:  SPy0649_2
  Spn:  SP0802_2
  Sau:  SA1288_2
  Lin:  lin0195 lin2013_2
  Bsu:  BS_dinG_2 BS_ypvA
  Bha:  BH1691_2 BH1792
  Syn:  slr1495
  Nos:  alr4075
  Eco:  dinG yoaA
  EcZ:  Z1020 Z2851
  Ecs:  ECs0877 ECs2517
  Ype:  YPO1206 YPO2071
  Sty:  STM0821 STM1821
  Vch:  VC1855 VC1990
  Pae:  PA1045 PA1866
  Hin:  HI0387
  Pmu:  PM0710
  Xfa:  XF0882
  Nme:  NMB0287
  NmA:  NMA2200
  Rso:  RSc1626
  Ccr:  CC2038
_______

[LK] COG1200 RecG-like helicase
  Aae:  aq_2053
  Tma:  TM0205
  Fnu:  FN1660
  Dra:  DR1916
  Cac:  CAC1736
  Cgl:  Cgl1294
  Mtu:  Rv2973c
  MtC:  MT3051
  Mle:  ML1671
  Lla:  L0262
  Spy:  SPy1785
  Spn:  SP1697
  Sau:  SA1070
  Lin:  lin1925
  Bsu:  BS_ylpB
  Bha:  BH2495
  Syn:  slr0020
  Nos:  all4789
  Eco:  recG
  EcZ:  ZrecG
  Ecs:  ECs4527
  Ype:  YPO0036
  Sty:  STM3744
  Vch:  VC2711
  Pae:  PA5345
  Hin:  HI1740
  Pmu:  PM0919
  Xfa:  XF0354
  Nme:  NMB1788
  NmA:  NMA0675
  Rso:  RSc2711
  Hpy:  HP1523
  jHp:  jhp1412
  Cje:  Cj0464
  Atu:  AGc3275
  Sme:  SMc00228
  Bme:  BMEII0686
  Mlo:  mlr0830
  Ccr:  CC1437
  Rpr:  RP593
  Rco:  RC0901
  Tpa:  TP0687
  Bbu:  BB0581
_______

[R] COG1201 Lhr-like helicases
  Afu:  AF1149 AF2177m
  Hbs:  VNG1251G
  Mac:  MA0762
  Mth:  MTH1802 MTH312
  Mja:  MJ0294
  Mka:  MK1035
  Tac:  Ta0587_1 Ta0838
  Tvo:  TVN0645_1 TVN0817
  Pho:  PH1110_1 PH1110_3 PH1329
  Pab:  PAB0744 PAB1817
  Pya:  PAE2130 PAE2362
  Sso:  SSO0112 SSO0394 SSO0965
  Ape:  APE2144 APE2188
  Cgl:  Cgl0823
  Mtu:  Rv3296
  MtC:  MT3395
  Nos:  alr3331
  Eco:  lhr
  EcZ:  Zlhr
  Ecs:  ECs2362
  Pae:  PA3272
  Rso:  RSc2599
  Atu:  AGc874
  Sme:  SMc02237
  Bme:  BMEII0462
  Mlo:  mlr5610
  Ccr:  CC2040
_______

[R] COG1202 Superfamily II helicase, archaea-specific
  Hbs:  VNG2173G
  Mac:  MA1411
  Mth:  MTH656
  Mja:  MJ1401
  Mka:  MK0835
  Pho:  PH0044
  Pab:  PAB2313
_______

[R] COG1203 Predicted helicases
  Afu:  AF0071 AF1874
  Mac:  MA3665
  Mth:  MTH1086
  Mja:  MJ0376 MJ0383
  Pho:  PH0176 PH0917 PH1246
  Pab:  PAB1689
  Pya:  PAE0068 PAE0208
  Sso:  SSO1270 SSO1402 SSO1440 SSO1999
  Ape:  APE1232
  Aae:  aq_371
  Tma:  TM1799
  Fnu:  FN1179
  Spy:  SPy1567
  Bha:  BH0336
  Eco:  ygcB
  EcZ:  ZygcB
  Ecs:  ECs3615
  Ype:  YPO2467
  Sty:  STM2944
  Pmu:  PM0312
_______

[R] COG1204 Superfamily II helicase
  Afu:  AF2245m
  Hbs:  VNG2213G VNG2368G
  Mac:  MA3203
  Mth:  MTH810
  Mja:  MJ1124_1 MJ1124_3
  Mka:  MK0111
  Tac:  Ta0835
  Tvo:  TVN0814
  Pho:  PH1280
  Pab:  PAB0592
  Pya:  PAE0894
  Sso:  SSO2462
  Ape:  APE0191
  Sce:  YER172c YGL251c YGR271w
  Spo:  SPAC9.03c SPBC13G1.10c
  Ecu:  ECU06g0920 ECU07g0830
  Aae:  aq_1328
  Eco:  yfjK
  Atu:  AGpT100
  Sme:  SMa2245
_______

[R] COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
  Afu:  AF2406
  Mac:  MA2672
  Mth:  MTH492
  Mja:  MJ1572.1 MJ1574
  Mka:  MK0244
  Pho:  PH1003
  Pab:  PAB1722
  Pya:  PAE2298
  Sso:  SSO0017
  Sce:  YDR291w
  Spo:  SPAC23A1.19c
  Dra:  DR0065 DRB0135_1
  Cgl:  Cgl0307 Cgl0710 Cgl0715
  Mtu:  Rv3649
  MtC:  MT3751
  Bsu:  BS_yprA
  Bha:  BH1764
  Nos:  alr7552
  EcZ:  Z5898 Z5901
  Ecs:  ECs5260 ECs5263
  Sme:  SMc03761
_______

[J] COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation
  Aae:  aq_691
  Tma:  TM0734
  Fnu:  FN1070
  Dra:  DR0209
  Lla:  L56416
  Spy:  SPy1173
  Spn:  SP0943
  Sau:  SA1094
  Lin:  lin1315
  Bsu:  BS_gid
  Bha:  BH2466
  Syn:  sll0204
  Nos:  alr4571
  Atu:  AGc3069
  Sme:  SMc02053
  Bme:  BMEI1073
  Mlo:  mlr1064
  Ccr:  CC2598
_______

[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
  Aae:  aq_607
  Tma:  TM1629
  Fnu:  FN1991
  Dra:  DR0808
  Cac:  CAC3222
  Cgl:  Cgl0919
  Mtu:  Rv1018c
  MtC:  MT1046
  Mle:  ML0249
  Lla:  L134450
  Spy:  SPy0443
  Spn:  SP0988
  Sau:  SA0457
  Lin:  lin0237
  Bsu:  BS_gcaD
  Bha:  BH0065
  Syn:  sll0899
  Nos:  alr3921
  Eco:  glmU
  EcZ:  ZglmU
  Ecs:  ECs4672
  Ype:  YPO4119
  Sty:  STM3862
  Buc:  BU027
  Vch:  VC2762
  Pae:  PA5552
  Hin:  HI0642
  Pmu:  PM1806
  Xfa:  XF1140
  Nme:  NMB0038
  NmA:  NMA0284
  Rso:  RSc0177
  Hpy:  HP0683
  jHp:  jhp0624
  Cje:  Cj0821
  Atu:  AGc3287
  Sme:  SMc00232
  Bme:  BMEII0684
  Mlo:  mll0836
  Ccr:  CC2304
  Rpr:  RP454
  Rco:  RC0680
_______

[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
  Afu:  AF0242
  Hbs:  VNG0008G VNG0009G VNG0390G
  Mac:  MA3022 MA3025 MA3140
  Mth:  MTH1523_1 MTH1589 MTH1759
  Mja:  MJ1101
  Mka:  MK0892 MK0917
  Tac:  Ta0335 Ta1486
  Tvo:  TVN0081 TVN0435
  Pho:  PH0380 PH1022 PH1697 PH1925
  Pab:  PAB0317 PAB0645 PAB1053 PAB1115
  Pya:  PAE0837 PAE2361 PAE2968 PAE3024 PAE3430 PAE3554
  Sso:  SSO0317 SSO0381 SSO0745 SSO0989 SSO2479
  Ape:  APE0255 APE1202 APE1208 APE2291
  Sce:  YDL055c YDR211w YOR260w
  Spo:  SPAC4D7.09 SPAC8C9.15c SPBC13G1.02 SPCC1906.01
  Ecu:  ECU05g1360 ECU10g0700 ECU11g0690
  Aae:  aq_718_1
  Dra:  DR0710
  Cac:  CAC2981_1 CAC3056
  Cgl:  Cgl0720
  Mtu:  Rv3264c
  MtC:  MT3364
  Mle:  ML0753
  Bsu:  BS_yfnH
  Bha:  BH1416 BH3324
  Syn:  sll1496_1 sll1558 slr0007 slr0983
  Nos:  alr2361_1 alr2825 alr3400
  Ype:  YPO3115
  Sty:  STM2092
  Pae:  PA0597
  Xfa:  XF0591
  Nme:  NMB1841
  NmA:  NMA0615
  Rso:  RSc0511
  Cje:  Cj1329_2 Cj1423c
  Atu:  AGc42 AGl170
  Sme:  SMb21058 SMb21059 SMb21416 SMc02758
  Bme:  BMEI2025 BMEII0827
  Mlo:  mll5085 mlr5884 mlr6764 mlr9119
  Ccr:  CC3536
_______

[M] COG1209 dTDP-glucose pyrophosphorylase
  Afu:  AF0325
  Hbs:  VNG0047Gm VNG0064G VNG1055G
  Mac:  MA2183 MA3777
  Mth:  MTH1791
  Tac:  Ta1074
  Tvo:  TVN0529 TVN0899
  Pho:  PH0413
  Pab:  PAB0784
  Sso:  SSO0831 SSO1782 SSO3219
  Ape:  APE1181
  Tma:  TM0862
  Dra:  DRA0031 DRA0042
  Cac:  CAC2333
  Cgl:  Cgl0331
  Mtu:  Rv0334
  MtC:  MT0348
  Mle:  ML2503
  Lla:  L197041
  Spy:  SPy0933
  Bsu:  BS_spsI
  Bha:  BH3363
  Syn:  sll0207
  Nos:  alr4491
  Eco:  rfbA rffH
  EcZ:  ZrffH
  Ecs:  ECs4722
  Ype:  YPO3861
  Sty:  STM2095 STM3923
  Pae:  PA5163
  Xfa:  XF0256
  Nme:  NMB0062 NMB0080
  NmA:  NMA0188 NMA0205
  Rso:  RSc0684
  Atu:  AGl532
  Sme:  SMb21324
  Mlo:  mlr7550
  Ccr:  CC1141
_______

[M] COG1210 UDP-glucose pyrophosphorylase
  Mac:  MA4459
  Mth:  MTH634
  Mja:  MJ1334
  Pab:  PAB0771
  Sso:  SSO0813
  Aae:  aq_1705
  Fnu:  FN1266
  Cac:  CAC2250 CAC2335
  Cgl:  Cgl0363 Cgl0857
  Mtu:  Rv0993
  MtC:  MT1022
  Mle:  ML0182
  Lla:  L177590
  Spy:  SPy0224 SPy2202
  Spn:  SP2092
  Sau:  SA2288
  Lin:  lin1070
  Bsu:  BS_ggaAa BS_gtaB BS_yngB BS_ytdA
  Bha:  BH2303 BH3652 BH3717
  Nos:  all3274
  Eco:  galF galU
  EcZ:  ZgalF ZgalU
  Ecs:  ECs1738 ECs2846
  Ype:  YPO1539 YPO1540
  Sty:  STM1752 STM2098
  Vch:  VC0395
  Pae:  PA2023
  Hin:  HI0812
  Pmu:  PM1289
  Xfa:  XF2432
  Nme:  NMB0638
  NmA:  NMA0848
  Rso:  RSc2237 RSp0006
  Hpy:  HP0646
  jHp:  jhp0591
  Cje:  Cj1536c
  Atu:  AGl1611 AGl2114
  Sme:  SMb20960 SMc04023
  Bme:  BMEII0023
  Mlo:  mll3025 mlr5275
  Ccr:  CC3637
  Bbu:  BB0207
  Mpn:  MPN667
  Mge:  MG453
_______

[I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase
  Pho:  PH0399
  Aae:  aq_1323
  Tma:  TM1393
  Fnu:  FN1580
  Dra:  DR2604
  Cac:  CAC3184
  Cgl:  Cgl2607
  Mtu:  Rv3582c
  MtC:  MT3688
  Mle:  ML0321
  Spn:  SP1271
  Sau:  SA0241 SA0245
  Lin:  lin0267 lin1071
  Bsu:  BS_yacM
  Bha:  BH0107
  Syn:  slr0951
  Nos:  all5167
  Eco:  ispD
  EcZ:  ZygbP
  Ecs:  ECs3601
  Ype:  YPO3361
  Sty:  STM2930
  Buc:  BU420
  Vch:  VC0528
  Pae:  PA3633
  Hin:  HI0672
  Pmu:  PM1608
  Xfa:  XF1293
  Nme:  NMB1513
  NmA:  NMA1713
  Rso:  RSc1643
  Hpy:  HP1020_1
  jHp:  jhp0404_1
  Cje:  Cj1607_1
  Atu:  AGc2659_1
  Sme:  SMc01040_1
  Bme:  BMEI0863_1
  Mlo:  mll0395_1
  Ccr:  CC1738_1
  Ctr:  CT462
  Cpn:  CPn0579
  Tpa:  TP0512_1
  Mpn:  MPN255
  Mge:  MG116
_______

[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase
  Aae:  aq_692
  Fnu:  FN0807
  Eco:  kdsB
  EcZ:  ZkdsB
  Ecs:  ECs1001
  Ype:  YPO1400
  Sty:  STM0988
  Vch:  VC1875
  Pae:  PA2979
  Hin:  HI0058
  Pmu:  PM0858
  Xfa:  XF2299
  Nme:  NMB0675
  NmA:  NMA0875
  Rso:  RSc2532
  Hpy:  HP0230
  jHp:  jhp0215
  Cje:  Cj0813
  Atu:  AGc152
  Sme:  SMc02898
  Bme:  BMEI1904
  Mlo:  mlr5497
  Ccr:  CC2934
  Rpr:  RP379
  Rco:  RC0524
  Ctr:  CT182
  Cpn:  CPn0235
_______

[M] COG1213 Predicted sugar nucleotidyltransferases
  Afu:  AF0263_1 AF1142
  Mth:  MTH369
  Pho:  PH1219_1
  Pab:  PAB2433_1
  Ape:  APE1514
  Aae:  aq_1367_1
  Fnu:  FN1670_1
  Pae:  PA1090
  Cje:  Cj1416c
  Ccr:  CC1152
_______

[O] COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone
  Aae:  aq_082
  Tma:  TM0874
  Fnu:  FN0928
  Dra:  DR0756
  Cac:  CAC2839
  Cgl:  Cgl0576
  Mtu:  Rv3421c
  MtC:  MT3530
  Mle:  ML0378_1
  Lla:  L91807
  Spy:  SPy1874
  Spn:  SP0127
  Sau:  SA1856
  Lin:  lin2183
  Bsu:  BS_ydiC
  Bha:  BH0546
  Syn:  sll1063
  Nos:  alr3138
  Eco:  yeaZ
  EcZ:  ZyeaZ
  Ecs:  ECs2516
  Ype:  YPO2072
  Sty:  STM1820
  Buc:  BU324
  Vch:  VC1989
  Pae:  PA3685
  Hin:  HI0388
  Pmu:  PM0709
  Xfa:  XF1533
  Nme:  NMB1871
  NmA:  NMA0585
  Rso:  RSc1367
  Hpy:  HP1051
  jHp:  jhp0374
  Cje:  Cj0133
  Atu:  AGc617
  Sme:  SMc01118
  Bme:  BMEI1979
  Mlo:  mlr5530
  Ccr:  CC0059
  Rpr:  RP551
  Rco:  RC0814
  Ctr:  CT343
  Cpn:  CPn0030
  Tpa:  TP0876
  Bbu:  BB0185
  Uur:  UU312
  Mpu:  MYPU_1190
  Mpn:  MPN291
  Mge:  MG208
_______

[M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis
  Afu:  AF1897 AF2115
  Mac:  MA2462
  Mth:  MTH547 MTH548_2
  Mka:  MK0490
  Tac:  Ta0484 Ta0565m Ta0873
  Tvo:  TVN0617 TVN0954
  Pho:  PH0456
  Pab:  PAB1246 PAB1314
  Pya:  PAE0419 PAE1839 PAE2355
  Sso:  SSO0114 SSO12256 SSO1299 SSO2209 SSO2389 SSO3002
  Sce:  YBR023c YBR038w YNL192w
  Spo:  SPAC13G6.12c SPBC1709.01
  Ecu:  ECU01g1390
  Aae:  aq_1407 aq_1684
  Cac:  CAC1485 CAC1561 CAC1691 CAC2523 CAC2578 CAC2589
  Cgl:  Cgl0129 Cgl1012
  Lla:  L80399 L95846 L98542
  Spy:  SPy2200
  Sau:  SA2459
  Lin:  lin0533
  Bsu:  BS_ydaM
  Bha:  BH2231
  Syn:  sll1377 slr0813
  Nos:  all4933 all5342 all5343 alr3757
  Eco:  yaiP ycdQ yhjO
  EcZ:  ZycdQ ZyhjOP
  Ecs:  ECs1268 ECs4413
  Ype:  YPO1953
  Sty:  STM3619
  Pae:  PA1163_2 PA3541
  Rso:  RSp0288
  Atu:  AGc3323 AGc847 AGl3012 AGl3021 AGl3500 AGpA132
  Sme:  SMa0866 SMb20391 SMb20460
  Bme:  BMEI1626 BMEII0728
  Mlo:  mlr5650 mlr6163 mlr6694 mlr7873
  Ccr:  CC1189
  Rco:  RC0971
_______

[R] COG1216 Predicted glycosyltransferases
  Afu:  AF0321 AF0322
  Mac:  MA2170 MA3758
  Mth:  MTH172 MTH343 MTH348
  Tvo:  TVN0869
  Pho:  PH0424
  Pab:  PAB0795
  Ape:  APE1184
  Dra:  DRA0038
  Cac:  CAC2171 CAC2172 CAC2312 CAC2320 CAC2321 CAC2327_1 CAC2347
        CAC3069
  Cgl:  Cgl0199 Cgl0327 Cgl2821 Cgl7019
  Mtu:  Rv1525 Rv3265c Rv3782 Rv3808c
  MtC:  MT1576 MT3365 MT3891 MT3915
  Mle:  ML0093 ML0113 ML0752
  Syn:  slr2126
  Nos:  all4424 alr4493
  Eco:  yefJm
  Sty:  STM0720 STM0724
  Pae:  PA1130
  Hin:  HI0869
  Xfa:  XF1637
  Rso:  RSc0687 RSc0688
  Atu:  AGl533 AGl538
  Sme:  SMb21313
  Mlo:  mll4800 mlr7339
  Ccr:  CC0465 CC2077 CC3632
_______

[T] COG1217 Predicted membrane GTPase involved in stress response
  Fnu:  FN0634
  Dra:  DR1198
  Cac:  CAC1684
  Cgl:  Cgl1074
  Mtu:  Rv1165
  MtC:  MT1202
  Mle:  ML1498
  Lla:  L0370
  Spy:  SPy1527
  Spn:  SP0681
  Sau:  SA0959
  Lin:  lin1055
  Bsu:  BS_ylaG
  Bha:  BH2632
  Syn:  slr1105
  Nos:  all4140
  Eco:  typA
  EcZ:  ZyihK
  Ecs:  ECs4793
  Ype:  YPO0026
  Sty:  STM4009
  Buc:  BU433
  Vch:  VC2744
  Pae:  PA5117
  Hin:  HI0864
  Pmu:  PM1173
  Xfa:  XF1213
  Nme:  NMB1199
  NmA:  NMA1370
  Rso:  RSc1296
  Hpy:  HP0480
  jHp:  jhp0432
  Cje:  Cj0039c
  Atu:  AGc4827
  Sme:  SMc03242
  Bme:  BMEII0419
  Mlo:  mll4112
  Ccr:  CC0741
  Rpr:  RP263
  Rco:  RC0349
_______

[P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
  Sce:  YOL064c
  Spo:  SPCC1753.04
  Aae:  aq_337
  Cgl:  Cgl0822
  Mtu:  Rv2131c
  MtC:  MT2189
  Mle:  ML1301
  Syn:  sll0895
  Nos:  alr4682
  Eco:  cysQ
  EcZ:  ZcysQ
  Ecs:  ECs5192
  Ype:  YPO3529
  Sty:  STM4404
  Buc:  BU561
  Vch:  VC2722
  Pae:  PA5175
  Hin:  HI0559
  Pmu:  PM1548
  Xfa:  XF0187
  Cje:  Cj1681c
  Atu:  AGc4406
  Sme:  SMb21225 SMc01952
  Bme:  BMEI1753
  Mlo:  mlr7577
  Ccr:  CC3469
  Rpr:  RP297
  Rco:  RC0400
  Ctr:  CT774
  Cpn:  CPn0920
_______

[O] COG1219 ATP-dependent protease Clp, ATPase subunit
  Sce:  YBR227c
  Aae:  aq_1337
  Tma:  TM0146
  Fnu:  FN2015
  Dra:  DR1973
  Cac:  CAC2639
  Cgl:  Cgl2336
  Mtu:  Rv2457c
  MtC:  MT2532
  Mle:  ML1477
  Lla:  L163602
  Spy:  SPy0885
  Spn:  SP1569
  Sau:  SA1498
  Lin:  lin1307
  Bsu:  BS_clpX
  Bha:  BH3052
  Syn:  sll0535
  Nos:  alr3684
  Eco:  clpX
  EcZ:  ZclpX
  Ecs:  ECs0492
  Ype:  YPO3156
  Sty:  STM0449
  Buc:  BU476
  Vch:  VC1921
  Pae:  PA1802
  Hin:  HI0715
  Pmu:  PM1977
  Xfa:  XF1188
  Nme:  NMB1372
  NmA:  NMA1585
  Rso:  RSc1712
  Hpy:  HP1374
  jHp:  jhp1288
  Cje:  Cj0275
  Atu:  AGc2327
  Sme:  SMc01904
  Bme:  BMEI0875
  Mlo:  mlr8474
  Ccr:  CC1961
  Rpr:  RP692
  Rco:  RC1068
  Ctr:  CT705
  Cpn:  CPn0846
  Tpa:  TP0508
  Bbu:  BB0612
_______

[O] COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit
  Aae:  aq_192
  Tma:  TM0522
  Sau:  SA1097
  Lin:  lin1318
  Bsu:  BS_clpY
  Bha:  BH2463
  Eco:  hslU
  EcZ:  ZhslU
  Ecs:  ECs4858
  Ype:  YPO0105
  Sty:  STM4091
  Buc:  BU579
  Vch:  VC2674
  Pae:  PA5054
  Hin:  HI0497
  Pmu:  PM1748
  Xfa:  XF1485
  Rso:  RSc0042
  Hpy:  HP0516
  jHp:  jhp0465
  Cje:  Cj0662c
  Atu:  AGc72
  Sme:  SMc02577
  Bme:  BMEI2048
  Mlo:  mll5004
  Ccr:  CC3728
  Rpr:  RP320
  Rco:  RC0434
  Bbu:  BB0295
_______

[KT] COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
  Tma:  TM1580
  Cac:  CAC0382_1
  Lin:  lin0778_1 lin1832_1
  Bsu:  BS_levR_1 BS_yplP
  Syn:  slr1529_2
  Nos:  all3558_2
  Eco:  prpR pspF
  EcZ:  ZprpR ZpspF
  Ecs:  ECs0384 ECs1880
  Ype:  YPO2352
  Sty:  STM0367 STM0571_1 STM1691 STM3773_1 STM4534_1
  Vch:  VC0665 VC1679 VCA0117
  Pae:  PA2354 PA2359 PA3932
  Rso:  RSp0228 RSp1079
_______

[O] COG1222 ATP-dependent 26S proteasome regulatory subunit
  Afu:  AF1976
  Hbs:  VNG0510G VNG2000G
  Mac:  MA4123 MA4268
  Mth:  MTH728
  Mja:  MJ1176
  Mka:  MK0878
  Pho:  PH0201
  Pab:  PAB2233
  Sso:  SSO0271
  Ape:  APE2012
  Sce:  YDL007w YDR394w YGL048c YKL145w YOR117w YOR259c
  Spo:  SPAC3A11.12c SPBC16C6.07c SPBC23G7.12c SPBC4.07c SPCC1682.16 SPCC576.10c
  Ecu:  ECU03g1330 ECU07g0190 ECU07g1640 ECU08g1970 ECU09g1840 ECU10g0130 ECU10g1420
_______

[R] COG1223 Predicted ATPase (AAA+ superfamily)
  Afu:  AF1285
  Mac:  MA3029
  Mth:  MTH1011
  Mja:  MJ1494
  Mka:  MK1368
_______

[K] COG1224 DNA helicase TIP49, TBP-interacting protein
  Afu:  AF1813
  Mka:  MK0007
  Pho:  PH1804
  Pab:  PAB2107
  Pya:  PAE1693
  Sso:  SSO2450
  Ape:  APE0326
  Sce:  YDR190c YPL235w
  Spo:  SPAPB8E5.09 SPBC83.08
  Ecu:  ECU09g1390 ECU11g1270
_______

[O] COG1225 Peroxiredoxin
  Hbs:  VNG1197G VNG1834G VNG2311H
  Mac:  MA0616 MA4068
  Tac:  Ta0357 Ta1368m
  Tvo:  TVN0286 TVN0419
  Pya:  PAE0877 PAE2732
  Sso:  SSO2071 SSO2255 SSO2613
  Ape:  APE0086 APE0291 APE2125
  Sce:  YIL010w
  Spo:  SPBC1773.02c
  Aae:  aq_458 aq_495
  Tma:  TM0386_1 TM0780
  Dra:  DR0846 DR1208 DR1209
  Cac:  CAC0327
  Cgl:  Cgl2438
  Mtu:  Rv1608c Rv2238c Rv2521
  MtC:  MT1643 MT2298 MT2597
  Mle:  ML0424
  Sau:  SA1680
  Bsu:  BS_ygaFm
  Bha:  BH0948
  Syn:  sll0221 sll1159 slr0242
  Nos:  all2375 all2556 alr2503 alr3183 alr4642
  Eco:  bcp
  EcZ:  Zbcp
  Ecs:  ECs3342
  Ype:  YPO3064
  Sty:  STM2491
  Vch:  VC2160
  Pae:  PA1008
  Hin:  HI0254
  Pmu:  PM1052
  Xfa:  XF0961
  Nme:  NMB0750
  NmA:  NMA0963
  Rso:  RSc1317
  Hpy:  HP0136
  jHp:  jhp0124
  Cje:  Cj0271
  Atu:  AGc3362 AGl2357
  Sme:  SMc00524
  Bme:  BMEI1049
  Mlo:  mll0004
  Ccr:  CC1673 CC1871
  Rco:  RC1090
_______

[P] COG1226 Kef-type K+ transport systems, predicted NAD-binding component
  Afu:  AF0218 AF0715 AF0717 AF1246 AF1673 AF2029_1
  Hbs:  VNG0615C VNG0650C_1 VNG0983C_1 VNG1732C_2 VNG1847G
  Mac:  MA1171_1 MA1527 MA1550 MA2034 MA2218 MA2447 MA2448
        MA3108_2 MA3981_2
  Mth:  MTH1258_1 MTH1520 MTH1778 MTH358_2 MTH505_2
  Mja:  MJ0138.1 MJ0139 MJ1357 MJ1633_1
  Mka:  MK0126_1 MK0606_1 MK1412_1 MK1549_1
  Tac:  Ta1433
  Tvo:  TVN0097 TVN0988
  Pho:  PH0279_1 PH1678
  Pab:  PAB0174_1 PAB0334
  Sso:  SSO1757
  Ape:  APE0955
  Sce:  YJL093c
  Aae:  aq_1863 aq_303
  Tma:  TM1057
  Dra:  DR0830 DR2336 DR2367_2
  Cac:  CAC1317
  Cgl:  Cgl0753
  Mtu:  Rv3200c
  MtC:  MT3294
  Lla:  L136943
  Lin:  lin2165
  Bsu:  BS_yugO_2
  Bha:  BH0947 BH1501 BH1971 BH1972 BH3340
  Syn:  sll0261 sll0536 sll0993 slr0498 slr1257_2 slr1664
  Nos:  all1079 all2911_2 all3534_2 all4633 alr0440 alr2046_2 alr5318
  Eco:  kch kefB_2 kefC_2 ybaL_2
  EcZ:  Zkch ZkefB_2 ZkefC_2 ZybaL_2
  Ecs:  ECs0050_2 ECs0531_2 ECs1750 ECs4201_2
  Ype:  YPO0191_2 YPO2675 YPO3094_2
  Sty:  STM0086_2 STM0492_2 STM1741 STM3457_2 STM4372
  Vch:  VC0992_2 VC2606_2 VCA0194
  Pae:  PA0742 PA1207_2 PA1496 PA5518_2
  Hin:  HI0911_2
  Xfa:  XF1426 XF2140_2
  Nme:  NMB0209_2
  NmA:  NMA0060_2
  Rso:  RSc0414_2 RSc3096_2
  Hpy:  HP0490
  jHp:  jhp0442
  Cje:  Cj1231_2
  Atu:  AGc1246_2 AGc3111_2
  Sme:  SMa0702 SMa1600_2 SMa2323 SMb20361 SMb21555_2 SMc00898_2
  Bme:  BMEI0679_2 BMEII1034_2
  Mlo:  mll0869 mll0907 mll3241_1 mll6635 mlr0783_2 mlr3234_2
  Ccr:  CC0204_2 CC1616 CC3496_2
  Rpr:  RP810_2
  Rco:  RC1252_2
  Uur:  UU573
  Mpu:  MYPU_4210
_______

[C] COG1227 Inorganic pyrophosphatase/exopolyphosphatase
  Afu:  AF0756
  Mja:  MJ0608
  Sce:  YHR201c
  Spo:  SPAC2F3.11
  Ecu:  ECU05g0460
  Tma:  TM0587_1 TM0587_3
  Fnu:  FN1824
  Dra:  DR2576
  Cac:  CAC2138
  Lla:  L62663
  Spy:  SPy0380
  Spn:  SP1534
  Sau:  SA1735
  Lin:  lin1486
  Bsu:  BS_yybQ
  Vch:  VC1687
_______

[Q] COG1228 Imidazolonepropionase and related amidohydrolases
  Afu:  AF0921
  Hbs:  VNG1211G
  Mth:  MTH1534
  Tac:  Ta0238
  Tvo:  TVN1357
  Pho:  PH0008 PH0812 PH0813
  Sso:  SSO1811 SSO2040 SSO2527
  Sce:  YJL213w
  Tma:  TM1723
  Fnu:  FN0740 FN1404
  Dra:  DRA0148
  Cac:  CAC1040 CAC3332
  Mtu:  Rv0074 Rv2915c
  MtC:  MT0080
  Spy:  SPy2081
  Sau:  SA2121
  Bsu:  BS_hutI
  Bha:  BH1984 BH2935 BH3008
  Ype:  YPO1972
  Sty:  STM0787
  Vch:  VC1205
  Pae:  PA5092
  Rso:  RSc2644
  Atu:  AGl1824
  Sme:  SMa1677 SMb21166
  Bme:  BMEII0368_1
  Mlo:  mlr8319 mlr9376
  Ccr:  CC0116_2 CC0300 CC0960 CC1972 CC1973 CC2672 CC3125
_______

[C] COG1229 Formylmethanofuran dehydrogenase subunit A
  Afu:  AF1930
  Mac:  MA0306 MA0833 MA4175
  Mth:  MTH1557
  Mja:  MJ1169
  Mka:  MK1529
_______

[P] COG1230 Co/Zn/Cd efflux system component
  Mac:  MA1117
  Pho:  PH0896
  Pya:  PAE2715
  Sso:  SSO2247
  Sce:  YDR205w YMR243c YOR316c
  Spo:  SPAC17D4.03c SPAC23C11.14
  Ecu:  ECU11g1510
  Aae:  aq_1073
  Tma:  TM0538
  Dra:  DR1102
  Cac:  CAC2540
  Cgl:  Cgl1251 Cgl2020
  Mle:  ML0283
  Lla:  L49325
  Spy:  SPy0845
  Spn:  SP1857
  Sau:  SA0163 SA1948
  Lin:  lin2720
  Bsu:  BS_czcD
  Nos:  all2845 all7610
  Eco:  ybgR
  EcZ:  ZybgR
  Ecs:  ECs0780
  Ype:  YPO1129
  Sty:  STM0758
  Pae:  PA0397 PA1297
  Pmu:  PM1337 PM1942
  Xfa:  XF0866
  Nme:  NMB1732
  NmA:  NMA1988
  Rso:  RSc2771 RSc2772
  Cje:  Cj1163c
  Atu:  AGc1625
  Sme:  SMc04167
  Bme:  BMEI1438
  Mlo:  mll2984 mlr2295
  Ccr:  CC0303
_______

[E] COG1231 Monoamine oxidase
  Dra:  DRA0274
  Cgl:  Cgl0224
  Mtu:  Rv3170
  MtC:  MT3259
  Bsu:  BS_yobN
  Syn:  slr0782
  Nos:  alr7169
  Pae:  PA0421
  Rso:  RSp0431
  Mlo:  mll3668
  Ccr:  CC1091 CC2793
_______

[H] COG1232 Protoporphyrinogen oxidase
  Afu:  AF1738
  Hbs:  VNG1795C
  Mac:  MA4081
  Pho:  PH0425
  Pya:  PAE0546
  Sce:  YER014w
  Spo:  SPAC1F5.07c
  Aae:  aq_2015
  Dra:  DR1130
  Cgl:  Cgl0431
  Mtu:  Rv2677c
  MtC:  MT2751
  Mle:  ML1044
  Sau:  SA1650
  Lin:  lin0883
  Bsu:  BS_hemY
  Bha:  BH1204
  Ype:  YPO3111
  Rso:  RSc0168
  Ccr:  CC1101
  Ctr:  CT745
  Cpn:  CPn0888
_______

[Q] COG1233 Phytoene dehydrogenase and related proteins
  Hbs:  VNG0542C VNG1684G VNG1755G
  Mac:  MA0127 MA1492 MA2968
  Mth:  MTH1807
  Mja:  MJ1488
  Sso:  SSO1188 SSO2422 SSO2907
  Ape:  APE1336m APE1820
  Dra:  DR0093 DR0810 DR0861 DR1724 DR2015 DR2250 DRA0363
  Cgl:  Cgl0476 Cgl0606 Cgl2377 Cgl2378
  Mtu:  Rv0897c Rv1432 Rv2997 Rv3829c
  MtC:  MT0921 MT1476 MT3075 MT3937
  Sau:  SA2348 SA2351
  Lin:  lin0999
  Bha:  BH0671 BH1848
  Syn:  sll0033 slr0088 slr1293
  Nos:  all3039 all3040 all3744 all5123 all7255 alr2064 alr4631
  Rso:  RSc1834
  Mlo:  mll5443 mlr3674 mlr3676 mlr5446
  Ccr:  CC3121
_______

[R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
  Afu:  AF0939 AF2155
  Hbs:  VNG1503C VNG2239C
  Mac:  MA2375 MA3031
  Mth:  MTH1831
  Mja:  MJ1502
  Mka:  MK1033
  Tac:  Ta1155
  Tvo:  TVN1230
  Pho:  PH1151
  Pab:  PAB0728
  Pya:  PAE3218 PAE3282
  Sso:  SSO0006 SSO1043
  Ape:  APE0636 APE1836
  Sce:  YKR079c
  Spo:  SPAC1D4.10 SPBC3D6.03c
  Ecu:  ECU06g0440
  Tma:  TM0864
  Dra:  DR0270
  Cac:  CAC0364 CAC1330 CAC1584 CAP0047
  Cgl:  Cgl2458
  Mtu:  Rv1339 Rv2407 Rv3796
  MtC:  MT1380 MT2479 MT3903
  Mle:  ML1173
  Lla:  L125485 L18686
  Spy:  SPy0208 SPy0924
  Spn:  SP0674
  Sau:  SA1335
  Lin:  lin0930 lin2084
  Bsu:  BS_yhfI BS_yqjK
  Bha:  BH1713 BH3002
  Syn:  sll0647 slr0050
  Nos:  alr5152
  Eco:  elaC
  EcZ:  ZelaC
  Ecs:  ECs3156
  Sty:  STM1109 STM2313
  Pmu:  PM0039
  Rso:  RSc2162 RSc2495
  Mlo:  mlr8305
  Ccr:  CC1176
  Ctr:  CT346
  Cpn:  CPn0025
  Tpa:  TP0819
  Bbu:  BB0755
_______

[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
  Afu:  AF0478
  Hbs:  VNG2060G
  Mac:  MA4065
  Mth:  MTH751
  Mja:  MJ1374
  Mka:  MK0284
  Tac:  Ta1474
  Tvo:  TVN0093
  Pho:  PH0260 PH1607 PH1945
  Pab:  PAB1219 PAB1991
  Spo:  SPCC777.06c
  Aae:  aq_1625
  Fnu:  FN0900
  Cac:  CAC3538
  Lla:  L582
  Spy:  SPy0530
  Spn:  SP1225
  Sau:  SA0021 SA1793
  Lin:  lin0319 lin1243 lin1754
  Bsu:  BS_yycJ
  Bha:  BH4023
  Syn:  sll1036
  Nos:  all3568 alr4847
  Eco:  phnP
  EcZ:  ZphnP
  Ecs:  ECs5075
  Ype:  YPO3465
  Pae:  PA1012 PA1986 PA3372
  Rso:  RSc1147
  Atu:  AGc2754 AGc4671
  Sme:  SMb20205 SMb21254 SMc01194
  Bme:  BMEI0985
  Mlo:  mll0416 mlr3257
  Ccr:  CC1821
  Rpr:  RP869
  Rco:  RC1342
  Ctr:  CT380 CT738
  Cpn:  CPn0479 CPn0879
  Tpa:  TP0489
  Bbu:  BB0533
_______

[J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing
  Afu:  AF0532 AF2361
  Hbs:  VNG2512G
  Mac:  MA2513 MA3206
  Mja:  MJ0047 MJ0162
  Tac:  Ta0333
  Tvo:  TVN0437
  Pho:  PH0724
  Pya:  PAE3309 PAE3418
  Sso:  SSO0188 SSO0386
  Ape:  APE0181 APE2295
  Sce:  YLR115w YLR277c_1 YMR137c
  Spo:  SPAC17G6.16c_1 SPAC22A12.01c SPBC1709.15c
  Ecu:  ECU05g0390 ECU10g0900 ECU10g1350
  Dra:  DRA0069
  Syn:  sll0514
  Nos:  all3220
  Vch:  VC0264
  Pae:  PA3614
  Rso:  RSc0201
  Atu:  AGc1534
  Sme:  SMa1131 SMc03176
  Mlo:  mll5484 mlr6574
  Ccr:  CC0811 CC3644
_______

[R] COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II
  Afu:  AF0719 AF2383
  Mac:  MA1946 MA1962 MA3419 MA4405
  Mth:  MTH1101
  Mja:  MJ0301 MJ0448
  Mka:  MK1079 MK1323 MK1574
  Pho:  PH0874 PH1079 PH1382
  Pab:  PAB0518 PAB1761
  Tma:  TM1679
  Cac:  CAC0535
  Sty:  STM2950
_______

[S] COG1238 Predicted membrane protein
  Mac:  MA3555
  Mja:  MJ0201 MJ0374_1
  Mka:  MK1194
  Aae:  aq_2066
  Eco:  yqaA
  EcZ:  Z3990
  Ecs:  ECs3551
  Ype:  YPO3302
  Sty:  STM2819
  Vch:  VC0553
  Pae:  PA2752 PA5517
  Hin:  HI0489 HI0703
  Pmu:  PM1055 PM1613
  Xfa:  XF0856
  Nme:  NMB0534
  NmA:  NMA0712
  Rso:  RSc0453
  Cje:  Cj0341c
  Atu:  AGc2265 AGl3254
  Sme:  SMa1028 SMa1032 SMa1643 SMb21580
  Bme:  BMEI0385
  Mlo:  mll3585 mlr3474
  Ccr:  CC2195
  Rpr:  RP436
  Rco:  RC0607
_______

[H] COG1239 Mg-chelatase subunit ChlI
  Afu:  AF1445
  Hbs:  VNG1565G_1
  Mac:  MA0877_1
  Mth:  MTH451_1 MTH556
  Mja:  MJ0911
  Mka:  MK0192_1
  Tac:  Ta0576_1
  Tvo:  TVN0630_1
  Dra:  DR2594
  Cgl:  Cgl1033 Cgl1951
  Mtu:  Rv0958 Rv2850c_1
  MtC:  MT0985 MT2916_1
  Syn:  slr1030 slr1777_1
  Nos:  all0152 all0278_1
  Pae:  PA2942
  Rso:  RSp0625_1
_______

[H] COG1240 Mg-chelatase subunit ChlD
  Hbs:  VNG1565G_2
  Mac:  MA0877_2
  Mth:  MTH451_2 MTH555
  Mja:  MJ0910
  Mka:  MK0192_2
  Tac:  Ta0576_2
  Tvo:  TVN0630_2
  Cgl:  Cgl1950
  Mtu:  Rv2850c_2
  MtC:  MT2916_2
  Syn:  slr1777_2
  Nos:  all0278_2
  Pae:  PA2941
  Rso:  RSp0625_2
_______

[L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family
  Afu:  AF0517
  Hbs:  VNG2181G
  Mac:  MA0681 MA3829 MA4403
  Mth:  MTH1770
  Mja:  MJ0363 MJ0961 MJ1489 MJECL13
  Mka:  MK0965 MK1120
  Tac:  Ta0799
  Tvo:  TVN1032
  Pho:  PH0606_1 PH0606_3 PH0606_5
  Pab:  PAB0384 PAB2373_1 PAB2373_3 PAB2373_5
  Pya:  PAE0901
  Sso:  SSO0774
  Ape:  APE0188
  Sce:  YBL023c YBR202w YEL032w YGL201c YLR274w YPR019w
  Spo:  SPAC1B2.05 SPAC3F10.01 SPBC211.04c SPBC25D12.03c SPBC4.04c SPCC1682.02c SPCC16A11.17
  Ecu:  ECU02g1150 ECU04g0850 ECU05g0780 ECU06g0340 ECU07g0490 ECU08g0290 ECU09g1360
        ECU11g0800
_______

[R] COG1242 Predicted Fe-S oxidoreductase
  Mja:  MJ0486
  Mka:  MK0044
  Aae:  aq_632
  Tma:  TM0515
  Fnu:  FN1142
  Cac:  CAC3238
  Lla:  L142355
  Spy:  SPy0376
  Sau:  SA1581
  Lin:  lin1770
  Bsu:  BS_ytqA
  Bha:  BH3284
  Eco:  yhcC
  EcZ:  ZyhcC
  Ecs:  ECs4090
  Ype:  YPO3556
  Sty:  STM3329
  Vch:  VC2371
_______

[KB] COG1243 Histone acetyltransferase
  Afu:  AF2402
  Hbs:  VNG1510C
  Mac:  MA0826
  Mth:  MTH817
  Mja:  MJ1136
  Mka:  MK1052
  Tac:  Ta1311
  Tvo:  TVN0498
  Pho:  PH1867
  Pab:  PAB1215
  Pya:  PAE0922
  Sso:  SSO0480
  Sce:  YPL086c
  Spo:  SPAC29A4.20
  Ecu:  ECU08g1090
  Tma:  TM1103
  Fnu:  FN0153
  Cac:  CAC1749
_______

[R] COG1244 Predicted Fe-S oxidoreductase
  Afu:  AF1012
  Hbs:  VNG1941C
  Mac:  MA4513
  Mth:  MTH1751
  Mja:  MJ0550
  Mka:  MK0340
  Tac:  Ta0528
  Tvo:  TVN1004
  Pho:  PH1888
  Pab:  PAB0194
  Cac:  CAP0173
_______

[R] COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog
  Afu:  AF0004
  Hbs:  VNG2612G
  Mac:  MA3204
  Mth:  MTH1695
  Mja:  MJ0719
  Mka:  MK0091
  Tac:  Ta1492
  Tvo:  TVN1498
  Pho:  PH0859
  Pab:  PAB0824
  Pya:  PAE2352
  Sso:  SSO0287
  Ape:  APE1119
  Sce:  YDR091c
  Spo:  SPBC14F5.06
  Ecu:  ECU11g1580
_______

[E] COG1246 N-acetylglutamate synthase and related acetyltransferases
  Hbs:  VNG0482H
  Mac:  MA0239 MA4339
  Aae:  aq_1359
  Dra:  DR0683
  Mtu:  Rv2747
  MtC:  MT2818
  Mle:  ML0978
  Bsu:  BS_ywlB
  Bha:  BH3772
  Eco:  argA_2
  EcZ:  ZargA_2
  Ecs:  ECs3675_2
  Ype:  YPO1022_2
  Sty:  STM2992_2
  Buc:  BU456_2
  Vch:  VC2316_2
  Pae:  PA5204_2
  Pmu:  PM0828_2
  Nme:  NMB1876_2
  NmA:  NMA0580_2
  Rso:  RSc1250_2 RSp0139
_______

[M] COG1247 Sortase and related acyltransferases
  Mac:  MA0775
  Pya:  PAE3246
  Ape:  APE1984
  Dra:  DR1182
  Cac:  CAC0858
  Cgl:  Cgl0974
  Lla:  L19745
  Spn:  SP0492
  Sau:  SA2317
  Lin:  lin1437
  Bsu:  BS_yfmK BS_ywnH
  Bha:  BH0433
  Syn:  sll1647
  Nos:  alr4468
  Eco:  yncA
  EcZ:  Z2271
  Ecs:  ECs2052
  Sty:  STM1590
  Vch:  VCA0387
  Pae:  PA4866
  Rso:  RSc3133 RSp0397
  Atu:  AGc1598 AGc1654
  Sme:  SMc01229 SMc03840
  Bme:  BMEI0379 BMEI1858
  Mlo:  mll4342
  Ccr:  CC0935
_______

[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
  Afu:  AF2220
  Hbs:  VNG0154G VNG2220G
  Mac:  MA1019 MA1652 MA4013
  Mth:  MTH1648
  Mja:  MJ0636
  Mka:  MK0849
  Tac:  Ta0208 Ta1341 Ta1435
  Tvo:  TVN0099 TVN0251 TVN1386
  Pya:  PAE2623 PAE2649
  Sso:  SSO1123 SSO1524 SSO1565 SSO2559 SSO2689
  Ape:  APE1458 APE1669
  Sce:  YFL018c YPL017c YPL091w
  Spo:  SPAC1002.09c SPBC17A3.07
  Aae:  aq_736
  Tma:  TM0381
  Fnu:  FN0820
  Dra:  DR2370 DR2526
  Cgl:  Cgl0362 Cgl0668 Cgl1957 Cgl2954
  Mtu:  Rv0462 Rv0794c Rv2713 Rv2855 Rv3303c
  MtC:  MT0478 MT0817_1 MT2786 MT2922 MT3402
  Mle:  ML2387
  Lla:  L0036 L0197 L122198
  Spy:  SPy0813 SPy1031_2
  Spn:  SP0784 SP1161 SP1588
  Sau:  SA0551 SA0946 SA1349
  Lin:  lin0906 lin1047 lin1408 lin1472
  Bsu:  BS_acoL BS_pdhD BS_yqiV
  Bha:  BH0216 BH0779 BH1825 BH2652 BH2764
  Syn:  sll0703 slr1096 slr1849
  Nos:  all4968 all5185 alr3937 alr4745
  Eco:  gor lpd udhA ykgC
  EcZ:  Zgor ZlpdA ZudhA ZykgC
  Ecs:  ECs0120 ECs0342 ECs4372 ECs4891
  Ype:  YPO3417 YPO3914 YPO3917 YPO3977
  Sty:  STM0154 STM0564 STM3597 STM4126
  Buc:  BU207
  Vch:  VC0151 VC0186 VC2412 VC2638
  Pae:  PA1587 PA2025 PA2250 PA2991 PA4829
  Hin:  HI0161 HI1231
  Pmu:  PM0893 PM1235
  Xfa:  XF0868_2 XF1548
  Nme:  NMB0947 NMB0957 NMB1344_2
  NmA:  NMA1142 NMA1151 NMA1556
  Rso:  RSc0014 RSc1271 RSc1603 RSp1380
  Atu:  AGc2644 AGc2967 AGc3055 AGc4772 AGpA803
  Sme:  SMb21143 SMc00154 SMc00300 SMc01035 SMc01717 SMc02487 SMc03204
  Bme:  BMEI0145 BMEI0857 BMEI0972 BMEII0744 BMEII0745
  Mlo:  mll0523 mll4296 mll4470 mll5241 mlr0388 mlr2769 mlr8366
  Ccr:  CC0342 CC1731 CC2302
  Rpr:  RP460 RP805
  Rco:  RC0693 RC1239
  Ctr:  CT557
  Cpn:  CPn0833
  Mpu:  MYPU_0210 MYPU_7610_2
  Mpn:  MPN390
  Mge:  MG271
_______

[I] COG1250 3-hydroxyacyl-CoA dehydrogenase
  Afu:  AF0017_1 AF0285_1 AF0434 AF1025 AF1122_1 AF1177 AF1190
        AF1206 AF2017 AF2273_1
  Hbs:  VNG0681G VNG1313G_1
  Tac:  Ta0291_1 Ta0476 Ta0947
  Tvo:  TVN0826 TVN1091 TVN1310_1
  Pya:  PAE1383_1
  Sso:  SSO0647 SSO2514_1 SSO2871 SSO2996
  Ape:  APE1484_1
  Fnu:  FN1019
  Dra:  DR1068 DR1487_2 DR2477_1 DRA0143
  Cac:  CAC2009 CAC2708
  Mtu:  Rv0468 Rv0860_2 Rv1715
  MtC:  MT0484 MT0883_2 MT1754
  Mle:  ML2161_2 ML2461
  Sau:  SA0224_1
  Bsu:  BS_mmgB BS_yusL_1
  Bha:  BH0204 BH1995 BH3488_1 BH3800
  Eco:  fadB_2 ydbU yfcX_2
  EcZ:  Z3604_2 ZfadB_2
  Ecs:  ECs3224_2 ECs4774_2
  Ype:  YPO2747_2 YPO3766_2
  Sty:  STM2388_2 STM3983_2
  Vch:  VC1047_2 VC2758_2
  Pae:  PA1628 PA1737_2 PA3014_2 PA3590 PA5188 PA5386
  Rso:  RSc0244 RSc0474_1 RSc1759_2 RSc2013
  Atu:  AGc888_2 AGl2460 AGpA493_1
  Sme:  SMb21632 SMc00727 SMc01638_1 SMc02227_2
  Bme:  BMEI0099 BMEII0215 BMEII0497_2 BMEII1020
  Mlo:  mll1034 mll4199_2 mlr3490 mlr5041 mlr5629_2 mlr6793
  Ccr:  CC0076_2 CC0715 CC1813_2 CC3189_2
  Rpr:  RP560_1
  Rco:  RC0841 RC0842
_______

[C] COG1251 NAD(P)H-nitrite reductase
  Mac:  MA0685 MA3165 MA3167
  Aae:  aq_206_1
  Cac:  CAC2448
  Mtu:  Rv0252
  MtC:  MT0266
  Sau:  SA2188
  Bsu:  BS_nasB BS_nasD
  Bha:  BH0613
  Eco:  nirB
  EcZ:  ZnirB
  Ecs:  ECs4216
  Ype:  YPO0161
  Sty:  STM3474
  Pae:  PA1779_2 PA1781
  Rso:  RSp1220 RSp1222
  Atu:  AGl1891
  Sme:  SMb20984
  Mlo:  mlr2862
  Ccr:  CC0615
_______

[C] COG1252 NADH dehydrogenase, FAD-containing subunit
  Hbs:  VNG0891G
  Sso:  SSO1010 SSO2960 SSO3148
  Sce:  YDL085w YML120c YMR145c
  Spo:  SPAC3A11.07 SPBC947.15c
  Dra:  DR0950
  Cgl:  Cgl1430
  Mtu:  Rv0392c Rv1812c Rv1854c
  MtC:  MT0403 MT1860 MT1902
  Mle:  ML2061
  Lla:  L39857 L41335
  Sau:  SA0799 SA0802
  Lin:  lin2488 lin2787
  Bsu:  BS_yjlD BS_yumB BS_yutJ
  Bha:  BH3407 BH3415_2
  Syn:  sll1484 slr0851 slr1591 slr1743
  Nos:  all1126 all1127 all1553 all2964 alr3307 alr4094 alr5211
  Eco:  ndh
  EcZ:  Zndh
  Ecs:  ECs1487
  Ype:  YPO1617
  Sty:  STM1211
  Vch:  VC1890
  Pae:  PA2691 PA4538
  Hin:  HI0747
  Rso:  RSc2229
  Atu:  AGc3667
  Sme:  SMb20861 SMc04452
  Bme:  BMEII0786
  Mlo:  mlr0365
_______

[R] COG1253 Hemolysins and related proteins containing CBS domains
  Hbs:  VNG0505C VNG2308G VNG6302C
  Mac:  MA1656
  Sce:  YOL060c_1
  Spo:  SPCC4B3.03c
  Aae:  aq_101 aq_2120
  Tma:  TM0845
  Fnu:  FN1486
  Dra:  DR2176 DRB0128 DRB0129
  Cac:  CAC0460 CAC1422
  Cgl:  Cgl1167 Cgl1168 Cgl1413 Cgl1414 Cgl2234
  Mtu:  Rv1841c Rv1842c Rv2366c
  MtC:  MT1889 MT1890 MT2435
  Lla:  L64811 L84992
  Spy:  SPy0378
  Spn:  SP1963
  Sau:  SA0657
  Lin:  lin2334 lin2498 lin2881
  Bsu:  BS_yhdP BS_yhdT BS_yqhB BS_yrkA BS_yugS
  Syn:  sll0260 sll1254
  Nos:  all5096 alr0309 alr5216
  Eco:  yegH_2 yoaE_2 ytfL
  EcZ:  ZyegH_2 ZyoaE_2 ZytfL
  Ecs:  ECs2525_2 ECs2868_2 ECs5196
  Ype:  YPO1527_2 YPO1759_2 YPO3526
  Sty:  STM1828_2 STM2119_2 STM4407
  Buc:  BU323_2
  Vch:  VC0271 VCA0837
  Pae:  PA1331_2 PA5362
  Hin:  HI0452
  Pmu:  PM1677
  Xfa:  XF1280
  Nme:  NMB1485_2
  NmA:  NMA1694_2
  Rso:  RSc2277 RSp1172_2
  Hpy:  HP1490
  jHp:  jhp1383
  Cje:  Cj0183
  Atu:  AGc627 AGl1024_2 AGl2203
  Sme:  SMc00240 SMc01112
  Bme:  BMEI0671_2 BMEI1973
  Mlo:  mlr2581 mlr5537
  Ccr:  CC0053 CC0364
  Rpr:  RP740
  Rco:  RC1141
  Ctr:  CT256 CT257 CT423
  Cpn:  CPn0394 CPn0395 CPn0510
  Tpa:  TP0027 TP0028 TP0649 TP0936
  Bbu:  BB0059 BB0202
  Uur:  UU072
  Mpu:  MYPU_5140
  Mpn:  MPN159
  Mge:  MG146
_______

[C] COG1254 Acylphosphatases
  Afu:  AF0818
  Mac:  MA3367
  Mja:  MJ0553 MJ0809 MJ1331 MJ1405
  Tac:  Ta0064m
  Tvo:  TVN0020
  Pho:  PH0305a
  Pab:  PAB7421
  Pya:  PAE0890 PAE1232 PAE2603_2
  Sso:  SSO0887
  Ape:  APE1591
  Tma:  TM1564
  Dra:  DR0929
  Cac:  CAC2830
  MtC:  MT2991
  Lla:  L196178
  Spy:  SPy0352
  Spn:  SP1974
  Sau:  SA1236
  Lin:  lin1418
  Bsu:  BS_yflL
  Bha:  BH3653_2 BH3654_2 BH3655_2
  Nos:  alr0877
  Eco:  yccX
  EcZ:  Z1320
  Ecs:  ECs1052
  Ype:  YPO1446
  Sty:  STM1083
  Vch:  VC1355
  Pae:  PA0954
  Pmu:  PM0396
  Rso:  RSc0219 RSc3370
  Sme:  SMb20590
  Mlo:  mll7735
  Bbu:  BBB01
_______

[S] COG1255 Uncharacterized protein conserved in archaea
  Afu:  AF0740a
  Hbs:  VNG2608a
  Mth:  MTH1000
  Mja:  MJ0688
  Pho:  PH0209
  Pab:  PAB2224
_______

[N] COG1256 Flagellar hook-associated protein
  Aae:  aq_1662
  Tma:  TM0083
  Cac:  CAC2212
  Lin:  lin0713
  Bsu:  BS_flgK
  Bha:  BH3621
  Eco:  flgK
  EcZ:  ZflgK
  Ecs:  ECs1460
  Ype:  YPO0732 YPO1808
  Sty:  STM1183
  Buc:  BU346
  Vch:  VC2191
  Pae:  PA1086
  Rso:  RSp0351
  Hpy:  HP1119
  jHp:  jhp1047
  Cje:  Cj1466
  Atu:  AGc1014
  Sme:  SMc03048
  Bme:  BMEII0160
  Mlo:  mlr2938
  Ccr:  CC0899
  Tpa:  TP0660
  Bbu:  BB0181
_______

[I] COG1257 Hydroxymethylglutaryl-CoA reductase
  Afu:  AF1736
  Hbs:  VNG1875G
  Mac:  MA3073
  Mth:  MTH562
  Mja:  MJ0705
  Mka:  MK0355
  Tac:  Ta0406m
  Tvo:  TVN1168
  Pho:  PH1805
  Pab:  PAB2106
  Pya:  PAE2182
  Sso:  SSO0531
  Ape:  APE1869
  Sce:  YLR450w YML075c
  Spo:  SPCC162.09c
  Ecu:  ECU10g1720
  Lla:  L10433
  Spy:  SPy0880
  Spn:  SP1726
  Sau:  SA2333
  Lin:  lin0821
  Vch:  VCA0723
  Bbu:  BB0685
_______

[J] COG1258 Predicted pseudouridylate synthase
  Afu:  AF1152
  Hbs:  VNG1982C
  Mac:  MA1447
  Mth:  MTH1322
  Mja:  MJ0041
  Mka:  MK1646
  Tac:  Ta1296
  Tvo:  TVN0311
  Pho:  PH0962
  Pab:  PAB2391
  Pya:  PAE3368
  Sso:  SSO0972
  Ape:  APE0546
  Ecu:  ECU08g1530
_______

[S] COG1259 Uncharacterized conserved protein
  Afu:  AF1107
  Hbs:  VNG2597C
  Mac:  MA0542
  Pya:  PAE3481
  Sso:  SSO0218
  Ape:  APE1848
  Aae:  aq_283
  Tma:  TM0160
  Cgl:  Cgl1408
  Mtu:  Rv1829
  MtC:  MT1877
  Mle:  ML2074
  Syn:  sll1142
  Nos:  alr5259
  Ctr:  CT212
  Cpn:  CPn0140
_______

[I] COG1260 Myo-inositol-1-phosphate synthase
  Afu:  AF1794
  Mac:  MA0075 MA2253
  Mth:  MTH1105
  Pho:  PH1605
  Pab:  PAB1989
  Pya:  PAE1761
  Sso:  SSO0330 SSO0886
  Ape:  APE1517
  Sce:  YJL153c
  Aae:  aq_1763
  Tma:  TM1419
  Cgl:  Cgl2940
  Mtu:  Rv0046c
  MtC:  MT0052
  Mle:  ML0396 ML2692
  Sme:  SMb20249
_______

[NO] COG1261 Flagellar basal body P-ring biosynthesis protein
  Aae:  aq_833
  Tma:  TM1541
  Eco:  flgA
  EcZ:  ZflgA
  Ecs:  ECs1450
  Ype:  YPO0721 YPO1798
  Sty:  STM1173
  Buc:  BU336
  Vch:  VC2203
  Pae:  PA3350
  Rso:  RSp0341
  Hpy:  HP1477
  jHp:  jhp1370
  Cje:  Cj0769c
  Atu:  AGc971
  Sme:  SMc03031
  Bme:  BMEII1085
  Mlo:  mlr2917
  Ccr:  CC2065
_______

[S] COG1262 Uncharacterized conserved protein
  Mac:  MA0649 MA1102 MA1951 MA3092 MA4278
  Spo:  SPBC1604.01_2
  Mtu:  Rv0712 Rv3703c
  MtC:  MT0739 MT3806
  Bsu:  BS_yfmG
  Bha:  BH0900
  Syn:  slr1303
  Nos:  all3226_2 all5016 alr1336_2 alr2711 alr3494 alr3495 alr5360
  Vch:  VCA1077_2
  Pae:  PA0071 PA2395
  Pmu:  PM1825
  Xfa:  XF0752_2
  Nme:  NMB1624
  NmA:  NMA1888
  Rso:  RSc0951 RSc1789 RSp1502
  Atu:  AGl972
  Sme:  SMa1247 SMa2159 SMb20334
  Bme:  BMEII0987
  Mlo:  mll5466
  Ccr:  CC1173
  Ctr:  CT145_2
  Cpn:  CPn0148_2
_______

[G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
  Fnu:  FN1547_1
  Cac:  CAC0423_2 CAC0532_1 CAC0570_1 CAC1353_1 CAC1407_2 CAC3425_1
  Cgl:  Cgl1324_2 Cgl2590_2 Cgl2650
  Lla:  L145238_2 L37906_2 L90678_2
  Spy:  SPy0572_2 SPy1815_2 SPy1986_1 SPy2097_2
  Spn:  SP0577_2 SP0758_1 SP1684_1 SP1722_2 SP1884_2
  Sau:  SA0183_1 SA0186_2 SA0233_1 SA0432_2 SA1547_1 SA2114_1 SA2167_2
        SA2326_1
  Lin:  lin0026_2 lin1223_2
  Bsu:  BS_bglP_2 BS_glvC_1 BS_ptsG_1 BS_sacP_2 BS_sacX_2 BS_treP_2 BS_ybbF_2
        BS_ybfS_1 BS_yflF_1
  Bha:  BH0296_2 BH0422_1 BH0595_2 BH0673_1 BH0844_1 BH1856_2 BH2216_2
        BH3574_2
  Eco:  ascF_2 bglF_2 glvCm_1 malX_1 nagE_1 ptsG_1 treB_2
        yfeV_2
  EcZ:  Z3694_2 Z5178_1 ZascF_2 ZmalX_1 ZnagE_1 ZptsG_1 ZtreB_2
  Ecs:  ECs0709_1 ECs1479_1 ECs2329_1 ECs3300_2 ECs3571_2 ECs4623_1 ECs5217_2
  Ype:  YPO1608_1 YPO2628_1 YPO3697_2
  Sty:  STM0685_1 STM1203_1 STM2570_2 STM2758_1
  Buc:  BU356_1
  Vch:  VC0207_2 VC0910_2 VC0995_1 VC2013_1 VCA0653_2
  Pae:  PA3761_1
  Pmu:  PM0876_1 PM1575_2 PM1752_1 PM1846_2
  Rso:  RSp1285_2
  Ccr:  CC0449_1 CC0538_1
  Bbu:  BB0116_1 BB0645_1 BBB29_1
  Mpu:  MYPU_0170_1 MYPU_3610_1 MYPU_3640_1
  Mpn:  MPN207_1
  Mge:  MG069_1
_______

[G] COG1264 Phosphotransferase system IIB components
  Fnu:  FN1547_2
  Cac:  CAC0423_1 CAC0532_2 CAC0570_2 CAC1353_2 CAC1407_1 CAC3425_2
  Cgl:  Cgl1324_1 Cgl2590_1 Cgl2651
  Lla:  L145238_1 L37906_1 L90678_1
  Spy:  SPy0572_1 SPy1815_1 SPy1986_2 SPy2097_1
  Spn:  SP0577_1 SP0758_2 SP1684_2 SP1722_1 SP1884_1
  Sau:  SA0183_2 SA0186_1 SA0233_2 SA0255_1 SA0432_1 SA1547_2 SA2114_2
        SA2167_1 SA2326_2
  Lin:  lin0026_1 lin1223_1
  Bsu:  BS_bglP_1 BS_glvC_2 BS_ptsG_2 BS_sacP_1 BS_sacX_1 BS_treP_1 BS_ybbF_1
        BS_ybfS_2 BS_yflF_2
  Bha:  BH0296_1 BH0422_2 BH0595_1 BH0673_2 BH0844_2 BH1856_1 BH2216_1
        BH3574_1
  Eco:  ascF_1 bglF_1 glvCm_2 malX_2 nagE_2 ptsG_2 treB_1
        yfeV_1
  EcZ:  Z3694_1 Z5178_2 ZascF_1 ZmalX_2 ZnagE_2 ZptsG_2 ZtreB_1
  Ecs:  ECs0709_2 ECs1479_2 ECs2329_2 ECs3300_1 ECs3571_1 ECs4623_2 ECs5217_1
  Ype:  YPO0851 YPO1608_2 YPO2628_2 YPO3697_1
  Sty:  STM0685_2 STM1203_2 STM2570_1 STM2758_2
  Buc:  BU356_2
  Vch:  VC0207_1 VC0910_1 VC0995_2 VC2013_2 VCA0653_1
  Pae:  PA3761_2
  Pmu:  PM0876_2 PM1575_1 PM1640_2 PM1752_2 PM1846_1
  Rso:  RSp1285_1
  Ccr:  CC0449_2 CC0538_2
  Bbu:  BB0116_2 BB0367 BB0645_2 BBB29_2
  Uur:  UU178
  Mpu:  MYPU_0170_2 MYPU_3610_2 MYPU_3640_2
  Mpn:  MPN207_2 MPN268
  Mge:  MG069_2 MG129
_______

[R] COG1266 Predicted metal-dependent membrane protease
  Hbs:  VNG0354C VNG1993H
  Mac:  MA1069 MA1162 MA2652 MA4466
  Mth:  MTH1189 MTH623 MTH633_2
  Pho:  PH1803
  Pab:  PAB0241 PAB0268 PAB0274
  Pya:  PAE0294 PAE0872 PAE0966 PAE1433 PAE1434 PAE1905 PAE2439
  Ape:  APE0004
  Aae:  aq_022
  Tma:  TM1098 TM1529
  Fnu:  FN0640
  Dra:  DR0857
  Cac:  CAC0077 CAC0420 CAC0483 CAC2478 CAC3028 CAP0055
  Cgl:  Cgl2838
  Mtu:  Rv0658c Rv0804 Rv1140 Rv1863c
  MtC:  MT0687 MT0824 MT1173 MT1912
  Lla:  L116216 L122569 L135900 L136552 L87100 L89118 L92204
  Spy:  SPy0742 SPy1384
  Spn:  SP0143 SP0144 SP0181 SP0288 SP0431 SP0545 SP0547
        SP0925 SP1240 SP1332 SP1346 SP2116
  Sau:  SA0885 SA1598 SA1838 SA2106
  Lin:  lin0997 lin2176 lin2232
  Bsu:  BS_ydiL BS_ypbD BS_yyaK
  Bha:  BH0475 BH0560 BH1479 BH1608
  Syn:  sll0360 sll0696 slr0959 slr1288
  Nos:  all3785 all4324 alr0787 alr0947 alr2141 alr7029
  EcZ:  Z1787
  Ecs:  ECs1085
  Ype:  YPO0983 YPO1140
  Sty:  STM2377
  Vch:  VC1074
  Pae:  PA2884 PA5132
  Rso:  RSc3402
  Mlo:  mlr4378
  Ccr:  CC0229 CC0679 CC2538 CC3458
  Ctr:  CT254
  Cpn:  CPn0400
  Tpa:  TP0335
  Bbu:  BB0592
_______

[I] COG1267 Phosphatidylglycerophosphatase A and related proteins
  Mac:  MA0940
  Mth:  MTH1111
  Mja:  MJ1330
  Mka:  MK1672_2
  Pho:  PH0374
  Pab:  PAB2319
  Pya:  PAE0371_2
  Ape:  APE2032_2
  Aae:  aq_314
  Fnu:  FN1930
  Spy:  SPy2045
  Lin:  lin2497
  Bsu:  BS_ypjQ BS_yutG
  Bha:  BH1441 BH3424
  Eco:  pgpA
  EcZ:  ZpgpA
  Ecs:  ECs0471
  Ype:  YPO3179
  Sty:  STM0420
  Vch:  VC2265
  Pae:  PA4050
  Hin:  HI1306
  Pmu:  PM0728
  Nme:  NMB0386
  NmA:  NMA2102
  Rso:  RSc2769
  Hpy:  HP0737
  jHp:  jhp0674
  Cje:  Cj1610
  Rpr:  RP750
  Rco:  RC1161
_______

[R] COG1268 Uncharacterized conserved protein
  Afu:  AF1169
  Hbs:  VNG2316C
  Mac:  MA4340
  Mth:  MTH905
  Pho:  PH0159
  Pab:  PAB2248
  Tma:  TM0799
  Fnu:  FN2003
  Dra:  DR2470
  Cac:  CAC0211 CAC1360 CAC3456
  Cgl:  Cgl1913
  Lla:  L1011 L24031
  Spy:  SPy0207
  Spn:  SP0783
  Sau:  SA2077
  Lin:  lin0607
  Bsu:  BS_yhfU BS_yuiG
  Bha:  BH3358
  Syn:  slr1365
  Nos:  alr4576
  Atu:  AGc1360
  Sme:  SMc00964
  Bme:  BMEI0319 BMEI1431
  Mlo:  mlr7429 mlr7548
  Rpr:  RP324
  Rco:  RC0780
  Ctr:  CT359
  Tpa:  TP0228
_______

[C] COG1269 Archaeal/vacuolar-type H+-ATPase subunit I
  Afu:  AF1159
  Hbs:  VNG2144G
  Mac:  MA4153
  Mth:  MTH960
  Mja:  MJ0222
  Mka:  MK1012
  Tac:  Ta0008
  Tvo:  TVN0056
  Pho:  PH1981
  Pab:  PAB1180
  Pya:  PAE1773
  Sso:  SSO0559
  Ape:  APE0673
  Sce:  YMR054w YOR270c
  Spo:  SPAC16E8.07c
  Ecu:  ECU09g1790
  Fnu:  FN1741
  Dra:  DR0695
  Spy:  SPy0148
  Spn:  SP1322
  Ctr:  CT305
  Cpn:  CPn0091
  Tpa:  TP0429 TP0533
  Bbu:  BB0091
_______

[H] COG1270 Cobalamin biosynthesis protein CobD/CbiB
  Afu:  AF1336
  Hbs:  VNG1578H
  Mac:  MA0941
  Mth:  MTH1409
  Mja:  MJ1314
  Mka:  MK1516
  Tac:  Ta0076
  Tvo:  TVN0030
  Pho:  PH0376
  Pab:  PAB0025
  Pya:  PAE0381
  Sso:  SSO3235
  Ape:  APE2039
  Fnu:  FN0975
  Dra:  DRB0010
  Cac:  CAC0582
  Mtu:  Rv2236c
  MtC:  MT2295
  Lin:  lin1155
  Bha:  BH1588
  Syn:  slr1925
  Nos:  alr2082
  Sty:  STM2034
  Vch:  VC2380
  Pae:  PA1275
  Rso:  RSc0938 RSc2392
  Atu:  AGc5095
  Sme:  SMc04279
  Bme:  BMEI0707
  Mlo:  mlr1304
_______

[C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1
  Afu:  AF2296 AF2297
  Hbs:  VNG6053G VNG6473G VNG7039 VNG7170
  Mac:  MA1006
  Tac:  Ta0992 Ta1484m
  Tvo:  TVN0083 TVN0732
  Aae:  aq_1357
  Cgl:  Cgl1125
  Mtu:  Rv1623c
  MtC:  MT1659
  Lla:  L107726
  Sau:  SA0937
  Lin:  lin2866
  Bsu:  BS_cydA BS_ythA
  Bha:  BH0878 BH3975
  Syn:  slr1379
  Nos:  all4024
  Eco:  appC cydA
  EcZ:  ZappC ZcydA
  Ecs:  ECs0768 ECs1134
  Ype:  YPO1117
  Sty:  STM0360 STM0740 STM1792
  Vch:  VC1571 VC1844 VCA0872
  Pae:  PA3930
  Hin:  HI1076
  Pmu:  PM0974
  Rso:  RSp1207 RSp1242
  Cje:  Cj0081
  Atu:  AGl1529
  Sme:  SMc02255
  Bme:  BMEII0760
  Mlo:  mlr4524
  Ccr:  CC0762
  Rpr:  RP216
  Rco:  RC0288
  Ctr:  CT013
  Cpn:  CPn0102
_______

[R] COG1272 Predicted membrane protein, hemolysin III homolog
  Sce:  YDR492w YLR023c YOL002c YOL101c
  Spo:  SPAC30D11.11 SPBC12C2.09c
  Ecu:  ECU06g1500
  Fnu:  FN1885
  Dra:  DR1880
  Cac:  CAC0882 CAC0947
  Cgl:  Cgl2533
  Mtu:  Rv1085c
  MtC:  MT1117
  Lla:  L97827
  Spy:  SPy1159
  Spn:  SP1466
  Sau:  SA1973
  Lin:  lin1978
  Bsu:  BS_yplQ
  Bha:  BH2865
  Eco:  yqfA
  EcZ:  Z4237
  Ecs:  ECs3771
  Ype:  YPO0900
  Sty:  STM3049
  Vch:  VC0040
  Pae:  PA4833
  Xfa:  XF0175
  Nme:  NMB1646
  NmA:  NMA1900
  Atu:  AGc1653
  Sme:  SMc00455
  Bme:  BMEI1877
  Mlo:  mlr3923
  Ccr:  CC3487
  Tpa:  TP1037
  Bbu:  BB0117
_______

[S] COG1273 Uncharacterized conserved protein
  Afu:  AF1726
  Mtu:  Rv0937c
  MtC:  MT0964
  Bsu:  BS_ykoV
  Bha:  BH2208
  Pae:  PA2150
  Atu:  AGl505 AGpA65 AGpA66
  Sme:  SMa0426 SMa1951 SMb20686 SMb21406 SMb21407
  Mlo:  mll2074 mll4607 mlr9623 mlr9624
_______

[C] COG1274 Phosphoenolpyruvate carboxykinase (GTP)
  Tac:  Ta0123
  Tvo:  TVN0200
  Pho:  PH0312
  Pab:  PAB1253
  Sso:  SSO2537
  Cgl:  Cgl2803
  Mtu:  Rv0211
  MtC:  MT0221
  Mle:  ML2624
  Rso:  RSc0017
  Ctr:  CT710
  Cpn:  CPn0851
  Tpa:  TP0122
_______

[P] COG1275 Tellurite resistance protein and related permeases
  Afu:  AF0347
  Mja:  MJ0576 MJ0762
  Tac:  Ta1371
  Pho:  PH0884
  Pab:  PAB2393
  Sce:  YPL092w
  Spo:  SPAPB8E5.03 SPBPB10D8.04c SPBPB10D8.05c SPBPB10D8.06c SPBPB10D8.07c SPCC794.06
  Cgl:  Cgl2804
  Mtu:  Rv1735c
  MtC:  MT1776
  Lla:  L181867
  Spy:  SPy0918
  Spn:  SP0410
  Sau:  SA1016
  Eco:  tehA
  EcZ:  ZtehA
  Ecs:  ECs2034
  Sty:  STM1609
  Vch:  VC2323 VCA0524
  Hin:  HI0511
  Pmu:  PM1587
  Nme:  NMB1603
_______

[P] COG1276 Putative copper export protein
  Aae:  aq_363
  Dra:  DRA0298
  Lin:  lin2168_2
  Bsu:  BS_ycnJ_2
  Bha:  BH2290
  Eco:  yebZ
  EcZ:  Z2888
  Ecs:  ECs2550
  Ype:  YPO1785
  Sty:  STM1874
  Rso:  RSp0659
  Sme:  SMa1198_2
  Mlo:  mll3323_2
_______

[R] COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
  Afu:  AF1137
  Hbs:  VNG2377G
  Mac:  MA0852 MA1538 MA1539 MA1544 MA1545 MA1546 MA1547
        MA4037 MA4359
  Tac:  Ta0087 Ta0734 Ta0856
  Tvo:  TVN0166 TVN0958
  Pho:  PH0865 PH1365 PH1369
  Pab:  PAB1669 PAB1844 PAB1848
  Sso:  SSO1318 SSO1936
  Ape:  APE0470
  Tma:  TM1029
  Dra:  DR1013 DR2315
  Cac:  CAC0139 CAC0140 CAC0146 CAC0862 CAC2041 CAC2042 CAC2733
        CAC3025 CAC3519
  Sau:  SA2303
  Lin:  lin0751 lin1678 lin2077
  Bsu:  BS_ycbO BS_ydbK BS_yhcI
  Bha:  BH0653 BH0817 BH3213
  Syn:  sll1107 slr0347
  Nos:  alr1620 alr2394
  Pae:  PA3395 PA3671 PA4038
  Rso:  RSp1372
  Sme:  SMa1185
  Bme:  BMEII0970
  Tpa:  TP0880
  Bbu:  BB0753
  Uur:  UU092 UU392
  Mpu:  MYPU_1970
  Mpn:  MPN333_1 MPN335_1
_______

[K] COG1278 Cold shock proteins
  Hbs:  VNG0101G VNG1836G
  Aae:  aq_1303a
  Tma:  TM1683 TM1874
  Fnu:  FN0528
  Dra:  DR0907
  Cac:  CAC0807 CAC2990
  Cgl:  Cgl0174 Cgl0308 Cgl0797
  Mtu:  Rv0871 Rv3648c
  MtC:  MT0893 MT3750.1
  Mle:  ML0198 ML2147
  Lla:  L117090 L172505
  Spy:  SPy2077
  Sau:  SA0747 SA1234 SA2494
  Lin:  lin1401 lin1992 lin2124
  Bsu:  BS_cspB BS_cspC BS_cspD
  Bha:  BH3610
  Eco:  cspA cspB cspC cspD cspE cspF cspG
        cspH cspI
  EcZ:  ZcspA ZcspC ZcspD ZcspE ZcspG ZcspH
  Ecs:  ECs0662 ECs0966 ECs1144 ECs1145 ECs2533 ECs4441
  Ype:  YPO1366 YPO1398 YPO1655 YPO1746 YPO2595 YPO2659 YPO3643
        YPO3644
  Sty:  STM0629 STM0943 STM1243 STM1837 STM1996 STM3649
  Buc:  BU322 BU489
  Vch:  VC1142 VCA0166 VCA0184 VCA0933
  Pae:  PA0456 PA0961 PA1159 PA1960_1 PA2622 PA3266
  Hin:  HI1434.1
  Pmu:  PM0481 PM0655
  Xfa:  XF2352 XF2622
  Nme:  NMB0838
  NmA:  NMA1047
  Rso:  RSc2466 RSc2702 RSc3156 RSp0002 RSp1053 RSp1054
  Atu:  AGc161 AGc3315 AGc4003 AGl1288 AGl3376 AGpA762 AGpA813
  Sme:  SMa0126 SMa0181 SMa0738 SMc00289 SMc01428 SMc01585 SMc04234
        SMc04318
  Bme:  BMEI0498 BMEI0518 BMEI0731 BMEI1510
  Mlo:  mlr0168 mlr2648 mlr6118 mlr8184 mlr9108 msl9578 msr2529
        msr2657 msr2658 msr6259 msr9313
  Ccr:  CC0665 CC1387 CC2623 CC2903
  Rpr:  RP670
  Rco:  RC1021
_______

[R] COG1279 Lysine efflux permease
  Fnu:  FN1861
  Cac:  CAC2593
  Cgl:  Cgl1233
  Mtu:  Rv0488 Rv1986
  MtC:  MT0507 MT2040
  Sau:  SA0753
  Bsu:  BS_yisU
  Bha:  BH0431
  Eco:  yggA
  EcZ:  ZyggA
  Ecs:  ECs3794
  Ype:  YPO0918
  Sty:  STM3066
  Vch:  VC0481
  Pae:  PA4365
  Pmu:  PM1618
  Rso:  RSc0385 RSc2024
  Hpy:  HP0718
  jHp:  jhp0656
  Atu:  AGc1690
  Bme:  BMEI1274
  Rco:  RC0717
_______

[E] COG1280 Putative threonine efflux protein
  Afu:  AF1703
  Mac:  MA0611 MA1855 MA2108
  Mth:  MTH1494
  Mka:  MK1358
  Tac:  Ta0875
  Tvo:  TVN0715
  Pya:  PAE1266 PAE2077
  Sso:  SSO0455
  Ape:  APE2379
  Tma:  TM0350
  Dra:  DR1999
  Cgl:  Cgl0146 Cgl2293 Cgl2603
  Bsu:  BS_ycgF BS_yrhP
  Bha:  BH0429 BH2170 BH2932 BH3495
  Syn:  slr1627
  Eco:  rhtB rhtC yahN yeaS yfiK
  EcZ:  ZyahN ZyeaS ZyfiK ZyigJ ZyigK
  Ecs:  ECs0382 ECs2507 ECs3444 ECs4753 ECs4754
  Ype:  YPO0181 YPO0483 YPO3831 YPO3832
  Sty:  STM0365 STM1270 STM2645 STM3959 STM3960
  Vch:  VC0136 VC0191 VC1421 VC1712 VC1939 VCA0355 VCA0846
        VCA1000
  Pae:  PA0417 PA1620 PA2306 PA2710 PA2916 PA2929 PA3665
        PA4507 PA4757 PA5249 PA5341
  Hin:  HI1307
  Pmu:  PM0727
  Xfa:  XF2730
  Rso:  RSc0073 RSc0231 RSc0418 RSc0814 RSc1520 RSc2088 RSp1025
        RSp1321 RSp1352
  Cje:  Cj1049c
  Atu:  AGc1583 AGc1604 AGc2164 AGc3421 AGc3837 AGc4773 AGc4838
        AGc546 AGl1188 AGl2738 AGpA516
  Sme:  SMb21507 SMc00044 SMc00422 SMc00423 SMc01425 SMc01851 SMc02484
        SMc02907 SMc02981 SMc03827 SMc03887 SMc04404
  Bme:  BMEI0143 BMEI1869 BMEII1057
  Mlo:  mll0653 mll1430 mll2564 mll3530 mll4109 mll4363 mll4618
        mll6377 mll7642 mll8240 mlr2506 mlr3188 mlr4987 mlr5029
        mlr6177 mlr7900 mlr8191
  Ccr:  CC0029 CC0126 CC0456 CC2013
_______

[O] COG1281 Disulfide bond chaperones of the HSP33 family
  Aae:  aq_2009
  Tma:  TM1394
  Fnu:  FN1610
  Dra:  DR0985
  Cac:  CAC2370
  Lla:  L17654
  Spy:  SPy0123
  Spn:  SP2188
  Sau:  SA0470
  Lin:  lin0254
  Bsu:  BS_yacC
  Bha:  BH0087
  Syn:  sll1988
  Nos:  all1588
  Eco:  yrfI
  EcZ:  ZyrfI
  Ecs:  ECs4243
  Ype:  YPO0139
  Sty:  STM3498
  Vch:  VC2736
  Pae:  PA5193
  Hin:  HI0810
  Pmu:  PM1547
  Xfa:  XF1713 XF1714
  Nme:  NMB2000
  NmA:  NMA0441
  Rso:  RSc1132
  Atu:  AGc757
  Sme:  SMc02136
  Bme:  BMEI1619
  Mlo:  mlr5648
  Ccr:  CC2241
  Mpu:  MYPU_3070
_______

[C] COG1282 NAD/NADP transhydrogenase beta subunit
  Mtu:  Rv0157
  MtC:  MT0165
  Mle:  ML2634
  Syn:  slr1434
  Nos:  all3408
  Eco:  pntB
  EcZ:  ZpntB
  Ecs:  ECs2308
  Ype:  YPO2302
  Sty:  STM1480
  Vch:  VCA0564
  Pae:  PA0196
  Hin:  HI1363
  Pmu:  PM0752
  Nme:  NMB0978
  NmA:  NMA1175
  Rso:  RSc2733 RSp0951 RSp0954
  Atu:  AGc4531
  Sme:  SMc03938
  Bme:  BMEII0325
  Mlo:  mlr5184
  Ccr:  CC3303
  Rpr:  RP074
  Rco:  RC0104
_______

[P] COG1283 Na+/phosphate symporter
  Fnu:  FN0276
  Cgl:  Cgl2687
  Spy:  SPy1695
  Spn:  SP0496
  Sau:  SA0100
  Lin:  lin0822 lin0823
  Bsu:  BS_yqeW
  Bha:  BH1353 BH1407
  Eco:  yjbB
  EcZ:  ZyjbB
  Ecs:  ECs4938
  Sty:  STM4189
  Vch:  VC0676
  Pae:  PA4822 PA5473
  Cje:  Cj0522 Cj0523
  Atu:  AGc4085 AGpTbx25
  Sme:  SMb20153 SMb21536 SMc00233
  Bme:  BMEI0528 BMEI0529
  Mlo:  mlr2470
  Tpa:  TP0771
  Mpu:  MYPU_3410
_______

[S] COG1284 Uncharacterized conserved protein
  Mka:  MK1587_2
  Tma:  TM0177
  Fnu:  FN0789
  Cac:  CAC0431 CAC0496 CAC0848 CAC1325
  Lla:  L14190 L148945 L20683 L21717 L22691
  Spy:  SPy2153 SPy2154 SPy2155 SPy2209
  Spn:  SP1111 SP2113
  Sau:  SA0601
  Lin:  lin1219 lin1422 lin2023 lin2365 lin2652
  Bsu:  BS_ydeO BS_yitE BS_yitT BS_ypjC BS_yqfU BS_yvjA BS_yxkD
  Bha:  BH1678 BH2916 BH2964 BH3604 BH3878
  Vch:  VC0940
  Atu:  AGc867 AGc869
  Sme:  SMc02240
  Bme:  BMEI1312
  Ctr:  CT221
  Cpn:  CPn0263
  Bbu:  BB0017
  Uur:  UU565
  Mpu:  MYPU_1090
  Mpn:  MPN630 MPN657
  Mge:  MG432 MG443
_______

[S] COG1285 Uncharacterized membrane protein
  Aae:  aq_447
  Fnu:  FN0215
  Dra:  DR0816
  Cac:  CAC3658
  Mtu:  Rv1811 Rv3008
  MtC:  MT1859 MT3088
  Lla:  L63770
  Spn:  SP1823
  Lin:  lin2751
  Bsu:  BS_sapB
  Bha:  BH0541 BH3225
  Syn:  slr0014
  Nos:  all3396
  Eco:  yhiD
  EcZ:  ZyhiD
  Ecs:  ECs4388
  Ype:  YPO1660 YPO2332
  Sty:  STM3764
  Pae:  PA2148 PA2558 PA4635
  Hin:  HI0647
  Pmu:  PM1753
  Rso:  RSc1461
  Atu:  AGl1431 AGpAbx97
  Sme:  SMc00799
  Bme:  BMEII0053
  Tpa:  TP0774
_______

[R] COG1286 Uncharacterized membrane protein, required for colicin V production
  Lla:  L93855
  Spy:  SPy1839
  Spn:  SP0405
  Sau:  SA0989
  Lin:  lin1193
  Bsu:  BS_yshB
  Bha:  BH3108
  Eco:  cvpA
  EcZ:  ZcvpA
  Ecs:  ECs3197
  Ype:  YPO2771
  Sty:  STM2363
  Vch:  VC1003
  Pae:  PA3109
  Hin:  HI1206
  Pmu:  PM0702
  Xfa:  XF1948
  Nme:  NMB0691
  NmA:  NMA0894
  Rso:  RSc1977
  Hpy:  HP0181
  jHp:  jhp0169
  Cje:  Cj0399
  Atu:  AGc1988
  Sme:  SMc00555
  Bme:  BMEI1487
  Mlo:  mll7834
  Ccr:  CC1659
  Rpr:  RP033
  Rco:  RC0044
  Tpa:  TP0522
  Bbu:  BB0766
_______

[R] COG1287 Uncharacterized membrane protein, required for N-linked glycosylation
  Afu:  AF0040 AF0329 AF0380
  Hbs:  VNG0005H VNG1068G
  Mac:  MA1172 MA3752 MA3753 MA3754
  Mth:  MTH1623 MTH1898 MTH1906 MTH420
  Mja:  MJ1525
  Tac:  Ta1136_1
  Tvo:  TVN1212_1
  Pho:  PH0242 PH1271
  Pab:  PAB0974 PAB1586 PAB2202
  Pya:  PAE3030
  Sso:  SSO1052
  Sce:  YGL022w
  Spo:  SPBC1271.02
  Cje:  Cj1126c
_______

[S] COG1288 Predicted membrane protein
  Fnu:  FN0023 FN0257 FN1409 FN1410 FN2106
  Spy:  SPy1543
  Spn:  SP2152
  Sau:  SA0065 SA1014
  Bsu:  BS_ycgA
  Bha:  BH2308
  Eco:  yfcC
  EcZ:  ZyfcC
  Ecs:  ECs3182
  Sty:  STM2339 STM4464
  Hin:  HI0594
  Ccr:  CC0578
  Bbu:  BB0843
_______

[S] COG1289 Predicted membrane protein
  Dra:  DR2205
  Sau:  SA2299
  Lin:  lin1024
  Bsu:  BS_yvaC
  Syn:  slr1298
  Eco:  yccS ydhK yeeA yhcP yhfK yjcQ
  EcZ:  Z1311 Z2660 ZyeeA ZyhcP ZyhfK ZyjcQ
  Ecs:  ECs1044 ECs2354 ECs2810 ECs4113 ECs4209 ECs5063
  Ype:  YPO0174 YPO0618 YPO1438 YPO3686
  Sty:  STM1073 STM1441 STM2060 STM3364 STM3467
  Vch:  VCA0718
  Pae:  PA0454 PA0875 PA1232 PA1270 PA2431 PA3305 PA3893
  Hin:  HI1680
  Pmu:  PM0392
  Xfa:  XF1978
  Nme:  NMB0050 NMB0188
  NmA:  NMA0079 NMA0220
  Rso:  RSc2889 RSp0134
  Cje:  Cj0557c
  Atu:  AGpA807
  Sme:  SMc00481
  Bme:  BMEI0240 BMEII0531
  Mlo:  mlr0902
_______

[C] COG1290 Cytochrome b subunit of the bc complex
  Hbs:  VNG0582C VNG0583G
  Tac:  Ta1222 Ta1228
  Tvo:  TVN0367 TVN0373
  Pya:  PAE1350
  Sso:  SSO2656 SSO2805 SSO2970
  Ape:  APE1725
  Sce:  Q0105 Q0120
  Aae:  aq_044
  Dra:  DR0436
  Cgl:  Cgl2141
  Mtu:  Rv2196
  MtC:  MT2252
  Mle:  ML0879
  Bsu:  BS_qcrB BS_qcrC_1
  Bha:  BH1673 BH1674_1
  Syn:  slr0342 slr0343
  Nos:  all0253 alr3421 alr3422
  Vch:  VC0574
  Pae:  PA4430
  Xfa:  XF0909
  Nme:  NMB2052
  NmA:  NMA0384
  Rso:  RSc2928
  Hpy:  HP1539
  jHp:  jhp1460
  Cje:  Cj1185c
  Atu:  AGc4073
  Sme:  SMc00188
  Bme:  BMEI0474
  Mlo:  mll2706 mlr0971
  Ccr:  CC0473
  Rpr:  RP271
  Rco:  RC0359
_______

[N] COG1291 Flagellar motor component
  Aae:  aq_1003
  Tma:  TM0676
  Cac:  CAC0304 CAC1846
  Lin:  lin0693
  Bsu:  BS_motA BS_ytxD
  Bha:  BH3240
  Eco:  motA
  EcZ:  ZmotA
  Ecs:  ECs2600
  Ype:  YPO0746 YPO1664
  Sty:  STM1923
  Vch:  VC0892
  Pae:  PA1460 PA4954
  Rso:  RSp1411
  Hpy:  HP0815
  jHp:  jhp0751
  Cje:  Cj0337c
  Atu:  AGc985
  Sme:  SMc03022
  Bme:  BMEII1109
  Mlo:  mll2905
  Ccr:  CC0750
  Tpa:  TP0725
  Bbu:  BB0281
_______

[M] COG1292 Choline-glycine betaine transporter
  Hbs:  VNG1077G
  Cgl:  Cgl0867 Cgl2259 Cgl2282
  Mtu:  Rv0917
  MtC:  MT0942
  Sau:  SA1183 SA1987 SA2408
  Lin:  lin2197
  Bsu:  BS_opuD
  Bha:  BH1457 BH2645 BH3895
  Eco:  betT caiT yeaV
  EcZ:  ZbetT ZcaiT ZyeaV
  Ecs:  ECs0043 ECs0360 ECs2510
  Ype:  YPO1168 YPO2494
  Sty:  STM0074
  Vch:  VC1279
  Pae:  PA3933 PA5291 PA5375
  Hin:  HI1706
  Pmu:  PM1791
  Nme:  NMB1277
  NmA:  NMA1483
  Sme:  SMb20333 SMc00279
  Tpa:  TP0106
_______

[K] COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP
  Afu:  AF2038
  Hbs:  VNG1508C
  Mac:  MA0651
  Mth:  MTH1907
  Mja:  MJ1625
  Mka:  MK0088
  Tac:  Ta1418m
  Tvo:  TVN1437
  Pho:  PH1465
  Pab:  PAB1903
  Pya:  PAE3259
  Sso:  SSO0195
  Ape:  APE1611
  Sce:  YPL009c_1
  Spo:  SPCC132.01c SPCC1322.17c
  Ecu:  ECU06g1390
  Tma:  TM0363
  Fnu:  FN0682
  Dra:  DR0559
  Cac:  CAC2111
  Lla:  L162597
  Spy:  SPy1013
  Spn:  SP0966
  Sau:  SA1051
  Lin:  lin1943
  Bsu:  BS_yloA
  Bha:  BH2516
  Syn:  slr0880
  Nos:  all4374
  Hpy:  HP1392
  jHp:  jhp1435
  Cje:  Cj1349c
  Bbu:  BB0347
_______

[C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2
  Hbs:  VNG6055G VNG6471G VNG7040 VNG7169
  Mac:  MA1007
  Aae:  aq_1358
  Cgl:  Cgl1124
  Mtu:  Rv1622c
  MtC:  MT1658
  Lla:  L109201
  Sau:  SA0938
  Lin:  lin2865
  Bsu:  BS_cydB BS_ythB
  Bha:  BH0877 BH3974
  Syn:  slr1380
  Nos:  all4023
  Eco:  appB cydB
  EcZ:  ZappB ZcydB
  Ecs:  ECs0769 ECs1135
  Ype:  YPO1118
  Sty:  STM0361 STM0741 STM1793
  Vch:  VC1570 VC1843 VCA0873
  Pae:  PA3929
  Hin:  HI1075
  Pmu:  PM0973
  Rso:  RSp1206 RSp1243
  Cje:  Cj0082
  Atu:  AGl1527
  Sme:  SMc02254
  Bme:  BMEII0759
  Mlo:  mlr4525
  Ccr:  CC0763
  Rpr:  RP217
  Rco:  RC0289
  Ctr:  CT014
  Cpn:  CPn0103
_______

[S] COG1295 Predicted membrane protein
  Mac:  MA2279
  Aae:  aq_453
  Fnu:  FN1154
  Dra:  DR2609
  Cac:  CAC0168 CAC0485
  Cgl:  Cgl0658 Cgl0927
  Mtu:  Rv2707 Rv3335c
  MtC:  MT2780 MT3439
  Mle:  ML0687 ML1017
  Lla:  L1778
  Spy:  SPy1353
  Spn:  SP0657
  Sau:  SA1699
  Lin:  lin1818
  Bsu:  BS_yfkH
  Bha:  BH3355
  Syn:  slr0119
  Nos:  all2070 alr3393
  Eco:  rbn yhjD
  EcZ:  Zrbn ZyhjD
  Ecs:  ECs4402 ECs4809
  Ype:  YPO0028 YPO3985
  Sty:  STM3608 STM4027
  Vch:  VC2742
  Pae:  PA0951 PA2751
  Hin:  HI0276
  Pmu:  PM1616
  Xfa:  XF0432
  Nme:  NMB0524
  NmA:  NMA0700
  Rso:  RSc1559 RSp1664
  Hpy:  HP1407
  jHp:  jhp1299
  Cje:  Cj1212c
  Atu:  AGl2474
  Sme:  SMb21356 SMb21363 SMc00734
  Bme:  BMEI0089
  Mlo:  mll2378 mll3481 mll8068 mll9669 mlr9690
  Ccr:  CC1840
  Rpr:  RP496
  Rco:  RC0670
  Ctr:  CT132
  Cpn:  CPn0188
  Mpu:  MYPU_2020
_______

[E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance)
  Afu:  AF1755
  Mac:  MA3437
  Fnu:  FN1039
  Dra:  DR0633
  Cgl:  Cgl0259 Cgl3022
  Lla:  L54719
  Spn:  SP0146
  Sau:  SA0010
  Lin:  lin1480
  Bsu:  BS_azlC
  Bha:  BH2910
  Eco:  ygaZ
  EcZ:  Z3983
  Ecs:  ECs3544
  Ype:  YPO3264
  Sty:  STM4042
  Vch:  VCA1002
  Pae:  PA2039
  Hin:  HI1738
  Pmu:  PM0422
  Nme:  NMB0892
  NmA:  NMA1111
  Rso:  RSc0513 RSc0568 RSp1376
  Hpy:  HP1331
  jHp:  jhp1251
  Atu:  AGc2001 AGc3745
  Sme:  SMc00559 SMc01882
  Bme:  BMEII0517
  Mlo:  mll1537 mll2427
_______

[S] COG1297 Predicted membrane protein
  Hbs:  VNG6268C
  Pho:  PH0361 PH1047
  Sce:  YGL114w
  Mtu:  Rv2395
  MtC:  MT2465
  Pae:  PA3934
  Hin:  HI0561
  Xfa:  XF2261
  Nme:  NMB0060
  NmA:  NMA0207
  Rso:  RSc3297
  Cje:  Cj0204
  Ccr:  CC2646
_______

[NU] COG1298 Flagellar biosynthesis pathway, component FlhA
  Aae:  aq_1212
  Tma:  TM0908
  Cac:  CAC2147
  Lin:  lin0688
  Bsu:  BS_flhA
  Bha:  BH2438
  Eco:  fhiA flhA
  EcZ:  ZfhiA ZflhA
  Ecs:  ECs0257 ECs2589
  Ype:  YPO1791
  Sty:  STM1913
  Buc:  BU241
  Vch:  VC2069
  Pae:  PA1452
  Rso:  RSp1393
  Hpy:  HP1041
  jHp:  jhp0383
  Cje:  Cj0882c
  Atu:  AGc1027
  Sme:  SMc03054
  Bme:  BMEII0166 BMEII0167
  Mlo:  mlr2957
  Ccr:  CC0910
  Ctr:  CT060
  Cpn:  CPn0363
  Tpa:  TP0714
  Bbu:  BB0271
_______

[G] COG1299 Phosphotransferase system, fructose-specific IIC component
  Fnu:  FN1441_3
  Dra:  DRB0073_2
  Cac:  CAC0234_2
  Cgl:  Cgl1891_3
  Lla:  L185031_3
  Spy:  SPy0146 SPy0855_3
  Spn:  SP0877_3 SP1617
  Sau:  SA0298 SA0655_3 SA2320 SA2434_2
  Lin:  lin0377_2 lin0423 lin0448 lin2240 lin2429_3
  Bsu:  BS_fruA_3 BS_yjdD_2
  Bha:  BH0828_3
  Eco:  fruA_3 frvB_2 frwC hrsA_3 ypdG
  EcZ:  Z3652 ZfruA_3 ZfrvB_2 ZfrwCm
  Ecs:  ECs3059_3 ECs3266 ECs4825_2 ECs4878
  Ype:  YPO0404 YPO1300_3
  Sty:  STM2204_3 STM3255_2 STM3858_2 STM4112
  Vch:  VC1821_1 VC1822_2 VC1826_3 VCA0516_2
  Pae:  PA3560_2
  Hin:  HI0446_3
  Rso:  RSc2863_2
  Bbu:  BB0408_3 BB0629_3
  Mpu:  MYPU_1290_3
  Mpn:  MPN078_3
  Mge:  MG062_3
_______

[S] COG1300 Uncharacterized membrane protein
  Afu:  AF0624
  Mac:  MA3688
  Mth:  MTH252
  Mja:  MJ0706 MJ0793
  Mka:  MK0438
  Pho:  PH0870 PH1620
  Pab:  PAB0377 PAB1265
  Ape:  APE2485
  Cac:  CAC2068
  Mtu:  Rv3694c
  MtC:  MT3796
  Sau:  SA0196
  Bsu:  BS_spoIIM
  Bha:  BH0733 BH1526
  Syn:  slr1478
  Nos:  alr1808
  Pae:  PA4319
  Mlo:  mll8331
  Ccr:  CC0568
_______

[C] COG1301 Na+/H+-dicarboxylate symporters
  Hbs:  VNG6308G
  Mac:  MA0491_1 MA2961
  Pho:  PH1295
  Pab:  PAB1799
  Ape:  APE2583
  Aae:  aq_1330
  Fnu:  FN0604 FN1148 FN2053
  Dra:  DR0656 DR2525
  Cac:  CAC1783
  Cgl:  Cgl2499 Cgl2541 Cgl2969
  Mtu:  Rv2443
  MtC:  MT2519
  Sau:  SA2172
  Bsu:  BS_gltP BS_gltT BS_ydbH
  Bha:  BH3227 BH3820
  Nos:  all0342
  Eco:  dctA gltP
  EcZ:  Z0888 ZdctA ZgltP
  Ecs:  ECs0758 ECs4408 ECs5059
  Ype:  YPO0254 YPO3992
  Sty:  STM3614 STM4283
  Vch:  VC1168 VCA0088
  Pae:  PA0119 PA1183 PA5479
  Xfa:  XF0656 XF0976 XF1937
  Rso:  RSc0330 RSc1957 RSc3169 RSc3275 RSp0995
  Cje:  Cj1192
  Atu:  AGc1476 AGl3041
  Sme:  SMb20611
  Mlo:  mll5840 mll7237
  Ccr:  CC0263 CC0628 CC1104
  Rpr:  RP176
  Rco:  RC0223 RC0275
  Ctr:  CT230 CT401
  Cpn:  CPn0289 CPn0528
  Tpa:  TP0555 TP0934
  Bbu:  BB0401
_______

[S] COG1302 Uncharacterized protein conserved in bacteria
  Tma:  TM1764 TM1771
  Fnu:  FN1619
  Dra:  DR0389 DR2068
  Cac:  CAC1734 CAC2085
  Lla:  L142733 L195257 L65637 L92295
  Spy:  SPy1260 SPy1262 SPy1820 SPy1886
  Spn:  SP0434 SP0442 SP1804
  Sau:  SA1068 SA1356 SA1984
  Lin:  lin1395 lin1929
  Bsu:  BS_yloU BS_yqhY
  Bha:  BH2499 BH2786
  Ctr:  CT790
  Cpn:  CPn0939
_______

[S] COG1303 Uncharacterized protein conserved in archaea
  Afu:  AF0751
  Hbs:  VNG0755C
  Mac:  MA3241
  Mth:  MTH1113
  Mja:  MJ1385
  Mka:  MK0803
  Tac:  Ta0931_1
  Tvo:  TVN1071_1
  Pho:  PH0461
  Pab:  PAB1040
  Sso:  SSO0267
  Ape:  APE2006
_______

[C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
  Afu:  AF0807 AF2287
  Hbs:  VNG6081G VNG6445G VNG7060 VNG7149
  Mac:  MA0604
  Mth:  MTH48
  Mja:  MJ0862
  Mka:  MK0776
  Tac:  Ta0102
  Tvo:  TVN0179
  Pho:  PH1202
  Pab:  PAB1662
  Pya:  PAE0801
  Sso:  SSO0063
  Ape:  APE1765
  Sce:  YML054c_2
  Spo:  SPAPB1A11.03
  Dra:  DR1031 DR1087
  Cgl:  Cgl2855
  Mtu:  Rv0694 Rv1872c
  MtC:  MT0721 MT1921
  Mle:  ML2046
  Lla:  L11083 L78730
  Spy:  SPy0414 SPy0879
  Spn:  SP0384 SP0715
  Sau:  SA2136
  Lin:  lin1420
  Bsu:  BS_ypgA
  Syn:  sll1556
  Nos:  all0170 all4591
  Eco:  lldD
  EcZ:  ZlldD
  Ecs:  ECs4483
  Ype:  YPO1569
  Sty:  STM1620 STM3694
  Vch:  VCA0984
  Pae:  PA2382 PA4771
  Hin:  HI1739.1
  Pmu:  PM0288
  Nme:  NMB1377
  NmA:  NMA1592
  Atu:  AGc4216 AGl1949 AGpA479
  Sme:  SMa0404 SMb20850 SMb20858 SMc01712 SMc01740
  Bme:  BMEII0377
  Mlo:  mll2703 mll4732 mll6909 mlr6371
  Ccr:  CC1151 CC1396
  Rpr:  RP452
  Rco:  RC0744
  Tpa:  TP0291
  Bbu:  BB0684
_______

[E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases
  Afu:  AF2357 AF2400_1
  Mac:  MA3270 MA3539
  Mth:  MTH357_3 MTH359_2 MTH412_2 MTH795_2 MTH845
  Mka:  MK0303 MK0623 MK0998 MK1350
  Pho:  PH0326_1
  Pab:  PAB1274_1 PAB2157
  Pya:  PAE2041
  Sso:  SSO1309 SSO2119
  Aae:  aq_1035 aq_1036 aq_1912
  Tma:  TM0007
  Dra:  DR0620_2 DR0843 DR1993
  Cac:  CAC2409
  Mtu:  Rv0790c Rv1673c Rv2409c Rv2566_1 Rv2569c
  MtC:  MT0815 MT1711 MT2482 MT2642_1 MT2645
  Mle:  ML0508 ML0607 ML2678_1
  Lin:  lin0469 lin2975
  Bsu:  BS_yebA
  Bha:  BH0606 BH0890
  Syn:  sll1049_2 sll1233 sll1608
  Nos:  alr0103 alr3376_2
  Pae:  PA1732 PA2044 PA2814 PA2873 PA4926
  Hin:  HI1048
  Pmu:  PM1211
  Xfa:  XF1451
  Rso:  RSc1123 RSc2697 RSp0111
  Atu:  AGc4251 AGl1957 AGl1961_1
  Sme:  SMa0025 SMb20888 SMc04058
  Mlo:  mll0715 mll2875 mll2877_1 mll4093 mll4861 mlr3933
  Ccr:  CC1600
_______

[S] COG1306 Uncharacterized conserved protein
  Fnu:  FN0456
  Tpa:  TP0083
  Bbu:  BB0165
_______

[S] COG1307 Uncharacterized protein conserved in bacteria
  Tma:  TM1468 TM1608
  Fnu:  FN1927_2
  Dra:  DR0063 DR0500 DR1554 DR1903 DR1986
  Cac:  CAC0701 CAC0948 CAC1624 CAC3284
  Cgl:  Cgl2298
  Mtu:  Rv2417c
  MtC:  MT2490
  Lla:  L123851 L174523_2 L4747 L98583
  Spy:  SPy0865 SPy1493 SPy1698 SPy1936
  Spn:  SP0742 SP1112 SP1557
  Sau:  SA0704 SA1258
  Lin:  lin0599_2 lin1977 lin2658
  Bsu:  BS_yitS BS_yviA
  Bha:  BH3627
  Pae:  PA0841
  Uur:  UU190 UU535
  Mpu:  MYPU_3590 MYPU_7660
  Mpn:  MPN472 MPN664
  Mge:  MG326 MG450
_______

[K] COG1308 Transcription factor homologous to NACalpha-BTF3
  Afu:  AF0215
  Hbs:  VNG0424C
  Mac:  MA0902
  Mth:  MTH177
  Mja:  MJ0280
  Mka:  MK0955
  Tac:  Ta1447
  Tvo:  TVN0118
  Pho:  PH1524
  Pab:  PAB0439
  Pya:  PAE3566
  Ape:  APE0198
  Sce:  YHR193c
  Spo:  SPBC25H2.05
  Ecu:  ECU02g1050
_______

[K] COG1309 Transcriptional regulator
  Afu:  AF1817
  Hbs:  VNG0726C VNG2675C
  Mac:  MA0178 MA0353 MA0354 MA0364 MA0368 MA1487 MA1771
        MA2493 MA2746 MA2761 MA2764 MA2766 MA2782 MA2902
        MA2948 MA2951 MA3586
  Mth:  MTH1063 MTH1787
  Pab:  PAB0976
  Sso:  SSO2506
  Aae:  aq_1058 aq_2179 aq_2185 aq_281 aq_321
  Tma:  TM0823 TM1030
  Fnu:  FN0473 FN0813 FN1004 FN1034 FN1803 FN1823
  Dra:  DR0074 DR0378 DR0720 DR0735 DR1003 DR1081 DR1379
        DR1384 DR1402 DR2148 DR2376 DR2396 DRA0142 DRA0308
        DRB0126
  Cac:  CAC0019 CAC0032 CAC0201 CAC0457 CAC0723 CAC0724 CAC0821
        CAC1070 CAC1071 CAC1536 CAC1668 CAC2471 CAC2605 CAC2768
        CAC2773 CAC3271 CAC3345 CAC3433 CAC3481 CAC3504 CAC3518
        CAC3606 CAC3687 CAP0028 CAP0046 CAP0079 CAP0087 CAP0100
        CAP0127
  Cgl:  Cgl0375 Cgl0840 Cgl0899 Cgl0937 Cgl1131 Cgl1267 Cgl1504
        Cgl1602 Cgl2053 Cgl2192 Cgl2330 Cgl2391 Cgl2439 Cgl2561
        Cgl2876 Cgl2995
  Mtu:  Rv0067c Rv0078 Rv0135c Rv0144 Rv0158 Rv0196 Rv0232
        Rv0238 Rv0273c Rv0275c Rv0302 Rv0328 Rv0330c Rv0452
        Rv0472c Rv0653c Rv0681 Rv0691c Rv0767c Rv0825c Rv1019
        Rv1167c Rv1219c Rv1255c Rv1353c Rv1474c Rv1534 Rv1556
        Rv1685c Rv1776c Rv1816 Rv1963c Rv2250c Rv2506 Rv2912c
        Rv3050c Rv3055 Rv3058c Rv3160c Rv3167c Rv3173c Rv3208
        Rv3249c Rv3295 Rv3405c Rv3557c Rv3574 Rv3830c Rv3855
  MtC:  MT0073 MT0084 MT0143 MT0152 MT0167 MT0206 MT0242
        MT0252 MT0286 MT0287 MT0315 MT0343 MT0345 MT0468
        MT0489 MT0682 MT0709 MT0719 MT0791 MT0847 MT1047
        MT1204 MT1257 MT1294 MT1396 MT1521 MT1585 MT1607
        MT1725 MT1826 MT1864 MT2014 MT2310 MT2581 MT2980
        MT3136 MT3141 MT3144 MT3249 MT3256 MT3262 MT3303
        MT3347 MT3394 MT3513 MT3661 MT3679 MT3938 MT3970
  Mle:  ML0064 ML0316 ML0717 ML0815 ML0949 ML1070 ML1733
        ML2457 ML2568 ML2677
  Lla:  L103086 L108801 L120589 L130713 L145301 L154512 L162229
        L191500 L199942 L34460 L45062 L49937 L53789
  Spy:  SPy0846 SPy1258 SPy1699 SPy2177
  Spn:  SP0743 SP1858 SP2234
  Sau:  SA2144 SA2165 SA2340 SA2358 SA2364 SA2379 SA2458
  Lin:  lin0482 lin0845 lin0861 lin0926 lin1827 lin2076 lin2193
        lin2279 lin2558 lin2734 lin2837 lin2947
  Bsu:  BS_lmrA BS_pksA BS_ycnC BS_ydeS BS_ydgC BS_yeeK BS_yerO
        BS_yfiR BS_yhgD BS_yobS BS_yrhI BS_ysiA BS_yttP BS_yuxN
        BS_yvaF BS_yvdT BS_yvkB BS_ywcC BS_yxaF BS_yxbF
  Bha:  BH0317 BH0353 BH0428 BH0580 BH0719 BH0987 BH1002
        BH1836 BH1887 BH1965 BH2103 BH2145 BH2721 BH2958
        BH3102 BH3207 BH3332 BH3394 BH3415_1 BH3733 BH3797
  Syn:  sll1286 sll1392 slr0895
  Nos:  all2813 all3728 all4279 all7523 alr0810 alr1721 alr1941
        alr1942 alr3646 alr4567 alr4992_1 alr5296 alr7526
  Eco:  acrR betI envR ttk uidR ybiH ycdC
        ycfQ ydhM yijC yjdC ytfA
  EcZ:  Z2510 Z2666 ZacrR ZbetI ZenvR Zttk ZuidR
        ZybiH ZycdC ZycfQ ZyijC ZyjdC
  Ecs:  ECs0359 ECs0517 ECs0874 ECs1259 ECs1489 ECs1862 ECs2326
        ECs2357 ECs4136 ECs4516 ECs4894 ECs5116 ECs5181
  Ype:  YPO0046 YPO0341 YPO1167 YPO2378 YPO3131 YPO3840 YPO3913
  Sty:  STM0477 STM0580 STM0819 STM1122 STM1213 STM1437 STM1575
        STM1674 STM3389 STM3732 STM4127 STM4322
  Vch:  VC0152 VC0166 VC0214 VC0333 VC1408 VC1741 VC1746
        VC1965 VC2489 VCA0586 VCA0767 VCA0917 VCA0999
  Pae:  PA0167 PA0243 PA0294 PA0367 PA0436 PA0475 PA0828
        PA0839 PA1226 PA1241 PA1283 PA1290 PA1315 PA1403
        PA1504 PA1539 PA1836 PA1864 PA2020 PA2196 PA2270
        PA2484 PA2766 PA2885 PA2931 PA2957 PA3006 PA3034
        PA3133 PA3574 PA3678 PA3721 PA3973 PA4596 PA4600
        PA4831 PA4890 PA4984 PA5059 PA5374
  Hin:  HI0570 HI0893 HI0955
  Pmu:  PM1135 PM1155 PM1345
  Xfa:  XF2085 XF2715
  Nme:  NMB0810 NMB1717
  NmA:  NMA1020 NMA1971
  Rso:  RSc0012 RSc0031 RSc0162 RSc0472 RSc0538 RSc0635 RSc0698
        RSc0820 RSc1007 RSc1201 RSc2086 RSc2213 RSc2560 RSc3207
        RSp0108 RSp0443 RSp0599 RSp0613 RSp0796 RSp0815 RSp0816
        RSp1121 RSp1164 RSp1395
  Cje:  Cj0368c
  Atu:  AGc1514 AGc1821 AGc2887 AGc2996 AGc3662 AGc3729 AGc3874
        AGc4219 AGc4325 AGc4609 AGc4617 AGc478 AGl1093 AGl1283
        AGl1301 AGl1315 AGl1690GM AGl2069 AGl32 AGl3219 AGl3469
        AGl578 AGl676 AGl784 AGpA416 AGpA419 AGpA421 AGpA422
        AGpA558 AGpA650 AGpA729
  Sme:  SMa0190 SMa0223 SMa1299 SMa1428 SMa1726 SMa1882 SMa1887
        SMa2008 SMa2381 SMa2387 SMb20033 SMb20337 SMb20347 SMb20367
        SMb20455 SMb20525 SMb21208 SMb21571 SMc00095 SMc01522 SMc01668
        SMc01715 SMc01819 SMc02261 SMc02844 SMc02866 SMc03169 SMc04134
        SMc04348
  Bme:  BMEI0604 BMEI0623 BMEI0891 BMEI1379 BMEI1631 BMEI1641 BMEI1642
        BMEII0804 BMEII1117
  Mlo:  mll1406 mll1598 mll1924 mll2260 mll2397 mll2454 mll3386
        mll3646 mll3671 mll3939 mll4816 mll5233 mll7613 mll7734
        mll8133 mll8203 mlr0230 mlr0237 mlr0535 mlr0908 mlr1472
        mlr1634 mlr1953 mlr2120 mlr2419 mlr2543 mlr2831 mlr2892
        mlr3102 mlr3373 mlr3465 mlr3838 mlr3851 mlr4117 mlr4593
        mlr4666 mlr4833 mlr5206 mlr5353 mlr5690 mlr7295 mlr7359
        mlr7466 mlr7883 mlr7895 mlr8177 mlr8196
  Ccr:  CC0334 CC0732 CC0733 CC0772 CC0809 CC0919 CC0992
        CC1177 CC1190 CC1345 CC1539 CC1664 CC1786 CC1855
        CC2080 CC2204 CC2339 CC2493 CC2608 CC2662 CC2794
        CC2876 CC2977 CC3118 CC3123 CC3192 CC3343 CC3716
  Uur:  UU290
_______

[R] COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily
  Afu:  AF2198
  Hbs:  VNG0778C VNG1818a
  Mac:  MA1736
  Mth:  MTH971
  Mka:  MK0214
  Tac:  Ta0623
  Tvo:  TVN1035
  Pho:  PH0451 PH1488
  Pab:  PAB1045 PAB1919
  Pya:  PAE2024
  Sso:  SSO0111
  Ape:  APE0681
  Sce:  YDL216c YFR004w YOR261c
  Spo:  SPAC1687.13c SPAC19B12.10 SPAC31G5.13 SPBC4C3.07 SPCC1682.10
  Ecu:  ECU04g0420 ECU11g0570
  Aae:  aq_1691
  Dra:  DR0402
  Mtu:  Rv1334
  MtC:  MT1376
  Syn:  sll0864
  Nos:  all2907
  EcZ:  Z0978_1 Z1377_1 Z1819_1 Z2143_1 Z2351_1 Z3081_1 Z3314_1
        Z6032_1
  Ecs:  ECs0840_1 ECs1117_1 ECs1558_1 ECs1646_1 ECs1986_1 ECs2163_1 ECs2237_1
        ECs2722_1 ECs2946_1
  Ype:  YPMT1.08c_1 YPO2123_1
  Sty:  STM0922_1 STM1046_1 STM2591_1
  Pae:  PA0639_1 PA2102
  Rso:  RSc1695_1
_______

[L] COG1311 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B
  Afu:  AF1790
  Hbs:  VNG2417G
  Mac:  MA0037
  Mth:  MTH1405
  Mja:  MJ0702
  Mka:  MK1583
  Tac:  Ta0222
  Tvo:  TVN1372
  Pho:  PH0123
  Pab:  PAB2266
  Sce:  YJR006w
  Spo:  SPAC27E2.05
  Ecu:  ECU09g0770
_______

[G] COG1312 D-mannonate dehydratase
  Tac:  Ta0753
  Tvo:  TVN0074
  Tma:  TM0069
  Cac:  CAC1332
  Lla:  L0020
  Bsu:  BS_yjmE
  Bha:  BH0706 BH1063
  Eco:  uxuA
  EcZ:  ZuxuA
  Ecs:  ECs5281
  Ype:  YPO1283
  Sty:  STM3135
  Hin:  HI0055
  Atu:  AGl2605 AGl3119 AGl515
  Sme:  SMb20446
  Bme:  BMEII0474
  Mlo:  mlr6866
_______

[R] COG1313 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins
  Afu:  AF1961
  Mac:  MA2410
  Mth:  MTH1069
  Mja:  MJ0674
  Mka:  MK0928
  Pho:  PH1113
  Pab:  PAB0742
  Pya:  PAE2191
  Ape:  APE1535
  Aae:  aq_729
  Tma:  TM0109 TM0924
  Cac:  CAC3242
_______

[U] COG1314 Preprotein translocase subunit SecG
  Aae:  aq_098
  Fnu:  FN0538
  Dra:  DR1825
  Cac:  CAC0714
  Cgl:  Cgl1546
  Mtu:  Rv1440
  MtC:  MT1485
  Mle:  ML0577
  Lla:  L0338
  Spy:  SPy0502
  Spn:  SP0974
  Sau:  SA0733
  Lin:  lin2545
  Bsu:  BS_yvaL
  Bha:  BH3555
  Syn:  ssr3307
  Nos:  asl4181
  Eco:  secG
  EcZ:  ZsecG
  Ecs:  ECs4054
  Ype:  YPO3499
  Sty:  STM3293
  Buc:  BU380
  Vch:  VC0640
  Pae:  PA4747
  Hin:  HI0445
  Pmu:  PM0208
  Xfa:  XF0304
  Nme:  NMB1888
  NmA:  NMA0569
  Rso:  RSc2063
  Hpy:  HP1255
  jHp:  jhp1176
  Cje:  Cj0235c
  Atu:  AGc2986
  Sme:  SMc01024
  Bme:  BMEI0847
  Mlo:  mll0609
  Ccr:  CC1719
  Rpr:  RP079
  Rco:  RC0109
  Ctr:  CT351a
  Cpn:  CPn1066
  Tpa:  TP0536
  Bbu:  BB0054
  Uur:  UU056
  Mpn:  MPN242
_______

[L] COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
  Tma:  TM0735
  Cac:  CAC2225
  Bha:  BH2430
  Vch:  VCA1085
  Tpa:  TP0710
  Bbu:  BB0267
_______

[K] COG1316 Transcriptional regulator
  Tma:  TM1866
  Dra:  DR1488 DR2581
  Cac:  CAC1264 CAC3046 CAC3063
  Cgl:  Cgl0718 Cgl2840
  Mtu:  Rv0822c Rv3267 Rv3484 Rv3840
  MtC:  MT0844 MT3367 MT3588 MT3948
  Mle:  ML0750 ML2247
  Lla:  L108747 L109013 L109379 L142310 L153822 L45616
  Spy:  SPy1350 SPy1733
  Spn:  SP0346 SP1368 SP1942
  Sau:  SA0908 SA1195 SA2103
  Lin:  lin0463 lin1025 lin2662
  Bsu:  BS_lytR BS_yvhJ BS_ywtF
  Bha:  BH3647 BH3670
  Syn:  sll1872 slr0883
  Nos:  all0187 alr2479
  Tpa:  TP0739
  Bbu:  BB0783
_______

[NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein
  Tma:  TM0219
  Cac:  CAC2160
  Bsu:  BS_fliH
  Bha:  BH2456
  Eco:  fliH
  EcZ:  ZfliH
  Ecs:  ECs2679
  Ype:  YPCD1.61 YPO0716 YPO1828
  Sty:  STM1971
  Buc:  BU075
  Vch:  VC2131
  Pae:  PA1103 PA1725
  Rso:  RSp0392 RSp0869
  Hpy:  HP0353
  jHp:  jhp0327
  Cje:  Cj0320
  Mlo:  mlr6341
  Ctr:  CT561
  Cpn:  CPn0826
  Tpa:  TP0401
  Bbu:  BB0289
_______

[K] COG1318 Predicted transcriptional regulators
  Afu:  AF0796
  Mja:  MJ1053
  Mka:  MK0231
  Pho:  PH0283
  Pab:  PAB2181
  Pya:  PAE3144
  Ape:  APE0469
  Aae:  aq_2056 aq_600
  Tma:  TM0369
_______

[C] COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
  Pya:  PAE1939 PAE2477_1
  Sso:  SSO2434 SSO2636
  Ape:  APE2219
  Dra:  DRA0232 DRA0236
  Mtu:  Rv0375c
  MtC:  MT0390
  Bsu:  BS_yurD
  Bha:  BH0747 BH1977_2
  Eco:  yagS ygeT ygfM
  EcZ:  Z4219 ZyagS ZygeT
  Ecs:  ECs0315 ECs3740 ECs3753
  Pae:  PA1932
  Rso:  RSc1467
  Atu:  AGpA735
  Sme:  SMa2041 SMa2351 SMb20130 SMb20396 SMb21338 SMb21557 SMc03103
  Mlo:  mll1127 mll2291 mll4881 mlr1700 mlr1926
  Tpa:  TP0081
  Bbu:  BB0556
_______

[P] COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit
  Hbs:  VNG0570Hm
  Mac:  MA4566
  Mth:  MTH1249
  Mja:  MJ0292
  Pho:  PH0944 PH1428 PH1455
  Pab:  PAB0486 PAB0803 PAB1398 PAB1885
  Tma:  TM1207
  Dra:  DR0886
  Cgl:  Cgl0265 Cgl2677
  Sau:  SA0584 SA0807
  Lin:  lin2483
  Bsu:  BS_yufB
  Bha:  BH1313
  Vch:  VCA0152
  Pae:  PA1059
  Atu:  AGc1668 AGc895
  Sme:  SMc00057 SMc03184
  Bme:  BMEII0765
  Rpr:  RP266
  Rco:  RC0354
_______

[K] COG1321 Mn-dependent transcriptional regulator
  Afu:  AF0245 AF1785 AF1984 AF2395
  Hbs:  VNG0530G VNG0536G VNG0835G VNG2579G
  Mac:  MA0022 MA3468 MA4338
  Mth:  MTH214_1 MTH936
  Mja:  MJ0568
  Mka:  MK0175
  Tac:  Ta0842 Ta0872
  Tvo:  TVN0938 TVN0945
  Pho:  PH1163
  Pab:  PAB0714
  Pya:  PAE0731
  Sso:  SSO0669 SSO2273 SSO3242
  Ape:  APE0142
  Tma:  TM0510 TM0602
  Dra:  DR2539
  Cac:  CAC1469 CAC2616
  Cgl:  Cgl0623 Cgl1874 Cgl2476
  Mtu:  Rv2711 Rv2788
  MtC:  MT2784 MT2858
  Mle:  ML1013
  Lla:  L84767
  Spy:  SPy0450
  Spn:  SP1638
  Sau:  SA0590
  Lin:  lin1991
  Bsu:  BS_yqhN
  Bha:  BH2807
  Eco:  ybiQ
  EcZ:  Z1039
  Ecs:  ECs0894
  Sty:  STM0835
  Xfa:  XF1013
  Mlo:  mll2499
  Ctr:  CT069_2
  Cpn:  CPn0347_2
  Tpa:  TP0167
_______

[S] COG1322 Uncharacterized protein conserved in bacteria
  Lla:  L185224
  Spy:  SPy0266
  Spn:  SP1981
  Eco:  yigN
  EcZ:  ZyigN
  Ecs:  ECs4762
  Ype:  YPO3782
  Sty:  STM3969
  Vch:  VC0082
  Pae:  PA1031
  Hin:  HI0500
  Pmu:  PM1267
  Xfa:  XF0413
  Nme:  NMB2050_2
  NmA:  NMA0386
  Rso:  RSc1035
  Atu:  AGc639
  Sme:  SMc01102
  Bme:  BMEII0263
  Mlo:  mlr4857
  Ccr:  CC0271
  Rpr:  RP690
  Rco:  RC1057
  Ctr:  CT825
  Cpn:  CPn0982
  Mpu:  MYPU_4640
_______

[R] COG1323 Predicted nucleotidyltransferase
  Mth:  MTH1126 MTH1749 MTH1750
  Mja:  MJ0951
  Mka:  MK0787
  Tma:  TM1513
  Fnu:  FN0732
  Cac:  CAC1741
  Lla:  L29477
  Spy:  SPy0314
  Spn:  SP1742
  Sau:  SA0974
  Lin:  lin2155
  Bsu:  BS_ylbM
  Bha:  BH2585
  Mpu:  MYPU_3090
_______

[P] COG1324 Uncharacterized protein involved in tolerance to divalent cations
  Afu:  AF1978
  Mac:  MA2450
  Mth:  MTH1509
  Mka:  MK1492
  Tac:  Ta0187
  Tvo:  TVN1397
  Pho:  PH0992
  Pab:  PAB1717
  Pya:  PAE2325
  Ape:  APE1668
  Ecu:  ECU04g1360
  Aae:  aq_1005
  Tma:  TM1056
  Dra:  DR2294
  Nos:  alr7093
  Eco:  cutA
  EcZ:  ZcutA
  Ecs:  ECs5118
  Ype:  YPO0346
  Sty:  STM4324
  Xfa:  XF0619
  Rso:  RSc2991
  Rpr:  RP177
  Rco:  RC0224
  Cpn:  CPn0907
_______

[J] COG1325 Predicted exosome subunit
  Afu:  AF2318
  Hbs:  VNG1287C
  Mac:  MA1783
  Mth:  MTH689
  Mja:  MJ0213
  Mka:  MK0388
  Pho:  PH1876
  Pab:  PAB1135
  Pya:  PAE1832 PAE2213
  Sso:  SSO0741
  Ape:  APE1451
_______

[R] COG1326 Uncharacterized archaeal Zn-finger protein
  Afu:  AF1966
  Hbs:  VNG0094C
  Mac:  MA0545 MA0546
  Mth:  MTH828
  Mja:  MJ0981
  Mka:  MK1656
  Pho:  PH0261
  Pab:  PAB0161
_______

[K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
  Tma:  TM1707
  Fnu:  FN1490
  Dra:  DR0087
  Cac:  CAC1698
  Cgl:  Cgl1882
  Mtu:  Rv2718c
  MtC:  MT2791
  Mle:  ML1005
  Lla:  L157023
  Spy:  SPy0338
  Spn:  SP1713
  Sau:  SA1509
  Lin:  lin1597
  Bsu:  BS_ytcG
  Bha:  BH3146
  Syn:  slr0780
  Eco:  ybaD
  EcZ:  ZybaD
  Ecs:  ECs0466
  Ype:  YPO3184
  Sty:  STM0415
  Vch:  VC2272
  Pae:  PA4057
  Hin:  HI0943
  Pmu:  PM0750
  Xfa:  XF0948
  Nme:  NMB1816
  NmA:  NMA0645
  Rso:  RSc0728
  Atu:  AGc2157
  Sme:  SMc01771
  Bme:  BMEI1190
  Mlo:  mlr8403
  Ccr:  CC1358
  Ctr:  CT406
  Cpn:  CPn0533
_______

[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase
  Mac:  MA0072
  Mth:  MTH1539
  Mja:  MJ0832_1 MJ0832_3 MJ0832_5
  Mka:  MK0901
  Pho:  PH0021
  Pab:  PAB2337
  Tma:  TM0385
  Fnu:  FN0311
  Cac:  CAC0480 CAC1209
  Lla:  L70400
  Spy:  SPy2110
  Spn:  SP0202
  Sau:  SA2410
  Lin:  lin0305
  Eco:  nrdD
  EcZ:  ZnrdD
  Ecs:  ECs5215
  Ype:  YPO3454
  Sty:  STM4452
  Vch:  VCA0511
  Pae:  PA1920
  Hin:  HI0075
  Pmu:  PM0940
  Rso:  RSp0963
_______

[K] COG1329 Transcriptional regulators, similar to M. xanthus CarD
  Dra:  DR2472
  Cgl:  Cgl2608
  Mtu:  Rv3583c
  MtC:  MT3689
  Mle:  ML0320
  Bsu:  BS_ydeB
  Bha:  BH1383 BH3935
  Atu:  AGc5013
  Sme:  SMc03874
  Bme:  BMEI0279
  Mlo:  mlr3857
  Ccr:  CC0653
  Rpr:  RP026
  Rco:  RC0030
  Tpa:  TP0511
  Bbu:  BB0355
_______

[L] COG1330 Exonuclease V gamma subunit
  Mtu:  Rv0631c
  MtC:  MT0659
  Eco:  recC
  EcZ:  ZrecC
  Ecs:  ECs3679
  Ype:  YPO1018
  Sty:  STM2996
  Buc:  BU453
  Vch:  VC2322
  Pae:  PA4285
  Hin:  HI0942
  Pmu:  PM0961
  Xfa:  XF0422
  Nme:  NMB1720
  NmA:  NMA1974
  Ctr:  CT640
  Cpn:  CPn0737
  Bbu:  BB0634
_______

[O] COG1331 Highly conserved protein containing a thioredoxin domain
  Afu:  AF1737
  Hbs:  VNG1303C VNG1905C
  Mac:  MA3726
  Mth:  MTH753 MTH754
  Tac:  Ta0991
  Tvo:  TVN0731
  Pya:  PAE2717
  Sso:  SSO2204
  Ape:  APE2533
  Aae:  aq_2146
  Dra:  DR0844
  Cac:  CAC3546
  Mtu:  Rv1084
  MtC:  MT1115
  Bsu:  BS_yyaL BS_yyaO
  Nos:  all1237
  Bme:  BMEI0004 BMEI0005
  Mlo:  mlr4484
  Ctr:  CT356
  Cpn:  CPn1057
_______

[L] COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Mac:  MA1935
  Mth:  MTH1078
  Mja:  MJ1667
  Tvo:  TVN0108
  Pho:  PH0167
  Tma:  TM1807
  Mtu:  Rv2819c
  MtC:  MT2886
_______

[O] COG1333 ResB protein required for cytochrome c biosynthesis
  Aae:  aq_2082
  Cgl:  Cgl0436
  Mtu:  Rv0528
  MtC:  MT0550
  Mle:  ML2410
  Bsu:  BS_resB
  Bha:  BH1578
  Syn:  slr2087
  Nos:  alr3123
  Nme:  NMB1804
  NmA:  NMA0659
  Rso:  RSc2986
_______

[N] COG1334 Uncharacterized flagellar protein FlaG
  Aae:  aq_2000
  Tma:  TM1124
  Cac:  CAC2208
  Bsu:  BS_yvyC
  Bha:  BH3615
  Vch:  VC2141
  Pae:  PA1093
  Hpy:  HP0751
  jHp:  jhp0688
  Cje:  Cj0547
_______

[Q] COG1335 Amidases related to nicotinamidase
  Afu:  AF2151 AF2335
  Hbs:  VNG1100C VNG2537G
  Mac:  MA2283 MA4411
  Mka:  MK0504
  Tac:  Ta0454 Ta0729 Ta0761 Ta1053
  Tvo:  TVN0543 TVN0771 TVN0853
  Pho:  PH0999
  Pab:  PAB1720
  Pya:  PAE3001
  Sso:  SSO1184 SSO2455
  Ape:  APE2350
  Sce:  YGL037c
  Spo:  SPBC557.06c
  Aae:  aq_994
  Tma:  TM0475
  Dra:  DR0947
  Cac:  CAC0779 CAC1778 CAC3465 CAP0030
  Cgl:  Cgl2436
  Mtu:  Rv2043c
  MtC:  MT2103
  Lla:  L125244 L169230 L67226 L8730
  Spy:  SPy1776
  Spn:  SP1583 SP1745
  Sau:  SA0181 SA1734 SA2438
  Lin:  lin0638 lin2716
  Bsu:  BS_yaaI BS_yddQ BS_yrdC BS_yueJ BS_ywoC
  Bha:  BH3777
  Nos:  all3748 alr2122 alr5162
  Eco:  pncA ycaC ycdL yecD
  EcZ:  Z1510 ZycaC ZydjB ZyecD
  Ecs:  ECs0982 ECs1257 ECs2475 ECs2577
  Ype:  YPO2160
  Sty:  STM0950 STM1293 STM1902 STM3761
  Vch:  VCA0712
  Pae:  PA1202 PA1677 PA2419 PA2698 PA3066 PA3288 PA3783
        PA3846 PA3953 PA4918 PA5507
  Xfa:  XF2274
  Nme:  NMB2157
  NmA:  NMA0244
  Rso:  RSc0242 RSc1760 RSc2596 RSp0438 RSp0661
  Cje:  Cj0119
  Atu:  AGc2481 AGc3739 AGc4541 AGc456 AGl1395GM AGl1749 AGpA348
        AGpA403
  Sme:  SMa0376 SMa1471 SMa1724 SMa1821 SMa2029 SMb20491 SMb21358
        SMb21405 SMc02275 SMc02355 SMc02412
  Bme:  BMEI0546
  Mlo:  mll2065 mll2765 mll4498 mll6720 mlr4169 mlr4509 mlr4882
        mlr6855 mlr7064 mlr7067 mlr9687
  Ccr:  CC1170 CC2795
  Tpa:  TP0696
  Bbu:  BBE22
_______

[L] COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Afu:  AF1863
  Mth:  MTH325
  Mka:  MK1296_1 MK1299
  Sso:  SSO1514 SSO1726 SSO1987
  Aae:  aq_381 aq_385
  Tma:  TM1792
  Bha:  BH0330
_______

[L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Mac:  MA1933
  Mth:  MTH1080
  Mja:  MJ1669
  Mka:  MK1316
  Tvo:  TVN0110
  Pho:  PH0165
  Pya:  PAE0114
  Sso:  SSO1425 SSO1426 SSO1430 SSO1432
  Tma:  TM1809
  Mtu:  Rv2821c
  MtC:  MT2888
  Nos:  all1474 all1475 all1478
_______

[NU] COG1338 Flagellar biosynthesis pathway, component FliP
  Aae:  aq_1920
  Tma:  TM0698
  Cac:  CAC2150
  Lin:  lin0684
  Bsu:  BS_fliP
  Bha:  BH2442
  Eco:  fliP
  EcZ:  ZfliP
  Ecs:  ECs2687
  Ype:  YPO0709 YPO1820
  Sty:  STM1979
  Buc:  BU082_2
  Vch:  VC2123
  Pae:  PA1446
  Rso:  RSp0375
  Hpy:  HP0684 HP0685
  jHp:  jhp0625
  Cje:  Cj0820c
  Atu:  AGc963
  Sme:  SMc03036
  Bme:  BMEII1080
  Mlo:  mlr2924
  Ccr:  CC0951
  Ctr:  CT562
  Cpn:  CPn0825
  Tpa:  TP0718
  Bbu:  BB0275
_______

[KH] COG1339 Transcriptional regulator of a riboflavin/FAD biosynthetic operon
  Afu:  AF2106
  Hbs:  VNG2126C
  Mac:  MA0547
  Mth:  MTH1500
  Mja:  MJ0056
  Mka:  MK1398
  Tac:  Ta1064
  Tvo:  TVN0519
  Pho:  PH0660
  Pab:  PAB0917
  Pya:  PAE2157
  Sso:  SSO0955
  Ape:  APE2112
_______

[S] COG1340 Uncharacterized archaeal coiled-coil protein
  Afu:  AF2031
  Hbs:  VNG0394C
  Mac:  MA0678 MA4428
  Mth:  MTH1626_2
  Mka:  MK0120
  Tac:  Ta1488
  Tvo:  TVN0079
  Pho:  PH0134
  Pab:  PAB0081
  Pya:  PAE1636
  Sso:  SSO0947
  Ape:  APE0790
_______

[R] COG1341 Predicted GTPase or GTP-binding protein
  Afu:  AF2049
  Mja:  MJ1315
  Mka:  MK0077
  Pho:  PH0197
  Pab:  PAB0124
  Pya:  PAE0841 PAE2242
  Sso:  SSO0779
  Ape:  APE0540 APE1649
  Sce:  YLL035w
  Spo:  SPCC830.03
_______

[R] COG1342 Predicted DNA-binding proteins
  Afu:  AF0666
  Mac:  MA0157_1 MA1017 MA4245
  Mth:  MTH1178
  Mja:  MJ1243
  Pho:  PH0803
  Pab:  PAB1543
  Cac:  CAC3166
  Vch:  VCA0091
_______

[L] COG1343 Uncharacterized protein predicted to be involved in DNA repair
  Afu:  AF1876 AF2434
  Mac:  MA3669
  Mth:  MTH1083
  Mja:  MJ0386
  Mka:  MK1310
  Tvo:  TVN0105
  Pya:  PAE0080 PAE0199
  Sso:  SSO1404
  Tma:  TM1796
  Fnu:  FN1176
  Mtu:  Rv2816c
  MtC:  MT2883
  Spy:  SPy1561
  Bha:  BH0342
  Nos:  asr0382 asr1570
_______

[N] COG1344 Flagellin and related hook-associated proteins
  Aae:  aq_1663 aq_1998
  Tma:  TM0082 TM0132 TM0758
  Cac:  CAC1555 CAC1634 CAC2167 CAC2203 CAC2211
  Lin:  lin0698 lin0714
  Bsu:  BS_flgL BS_hag BS_yvzB
  Bha:  BH1477 BH3616 BH3620
  Eco:  flgL fliC
  EcZ:  ZflgL ZfliC
  Ecs:  ECs1461 ECs2662
  Ype:  YPO0733 YPO0737 YPO0738 YPO0739 YPO1809 YPO1842
  Sty:  STM1184 STM1959 STM2771
  Vch:  VC2142 VC2143 VC2144 VC2187 VC2188 VC2190
  Pae:  PA1087 PA1092
  Rso:  RSp0352 RSp0382
  Hpy:  HP0115 HP0295 HP0601
  jHp:  jhp0107 jhp0280 jhp0548
  Cje:  Cj0720c Cj0887c Cj1338c Cj1339c
  Atu:  AGc1016 AGc958 AGc959 AGc961 AGc996
  Sme:  SMc03037 SMc03038 SMc03039 SMc03040 SMc03049
  Bme:  BMEII0150 BMEII0161
  Mlo:  mlr2925 mlr2927 mlr2939
  Ccr:  CC0792 CC0793 CC0794 CC0898 CC1460 CC1461 CC2976
  Tpa:  TP0659 TP0792 TP0868 TP0870
  Bbu:  BB0147 BB0182
_______

[N] COG1345 Flagellar capping protein
  Aae:  aq_2001
  Tma:  TM1123
  Cac:  CAC2205
  Lin:  lin0715
  Bsu:  BS_fliD
  Bha:  BH3614
  Eco:  fliD
  EcZ:  ZfliD
  Ecs:  ECs2663
  Ype:  YPO0740 YPO1841
  Sty:  STM1960
  Vch:  VC2140
  Pae:  PA1094
  Rso:  RSp0383
  Hpy:  HP0752
  jHp:  jhp0689
  Cje:  Cj0548
  Tpa:  TP0872
  Bbu:  BB0149
_______

[M] COG1346 Putative effector of murein hydrolase
  Mac:  MA3262
  Pho:  PH1802
  Pab:  PAB0240
  Fnu:  FN0468 FN1531
  Dra:  DR1449
  Cac:  CAC0611
  Lla:  L171802
  Sau:  SA0253 SA2328
  Bsu:  BS_ysbB BS_ywbG BS_yxaC_2
  Bha:  BH3268
  Eco:  yohK
  EcZ:  ZyohK
  Ecs:  ECs3034
  Ype:  YPO1513
  Sty:  STM2182 STM4272
  Vch:  VC1232 VC2100
  Pae:  PA3431 PA4013
  Hin:  HI1298
  Pmu:  PM0879
  Nme:  NMB2004
  NmA:  NMA0436
  Rso:  RSc2670
  Bme:  BMEI1596
_______

[C] COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD
  Ype:  YPO3237
  Vch:  VC2292
  Pae:  PA2996
  Hin:  HI0168
  Pmu:  PM1331
  Nme:  NMB0566
  NmA:  NMA0749
  Ctr:  CT280
  Cpn:  CPn0429
_______

[P] COG1348 Nitrogenase subunit NifH (ATPase)
  Mac:  MA1205 MA1213 MA1633 MA2032_1 MA3627 MA3895
  Mth:  MTH1560 MTH643
  Mja:  MJ0879
  Mka:  MK1416
  Fnu:  FN0303
  Cac:  CAC0253
  Syn:  slr0749
  Nos:  all1455 all5078 alr0874
  Sme:  SMa0825
  Mlo:  mlr5905
_______

[KG] COG1349 Transcriptional regulators of sugar metabolism
  Aae:  aq_2049
  Tma:  TM1069
  Fnu:  FN0228 FN1439
  Dra:  DRB0076
  Cac:  CAC0113 CAC0231 CAC1404 CAC1430 CAC2950 CAC2955 CAC2966
  Cgl:  Cgl0107 Cgl0112 Cgl1885 Cgl1889
  Lla:  L0031 L0152 L0153
  Spy:  SPy0853 SPy1712 SPy1924 SPy2054
  Spn:  SP0246 SP0875 SP1182 SP2168
  Sau:  SA0653 SA1998
  Lin:  lin0370 lin0379 lin0400 lin2212 lin2431 lin2465
  Bsu:  BS_fruR BS_glcR BS_iolR BS_ycnK BS_ytzE BS_yulB
  Bha:  BH0801 BH0826 BH0847 BH1553 BH2168
  Eco:  agaR deoR fucR gatR glpR sgcR srlR
        yciT ydjF ygbI yihW yjfQ
  EcZ:  Z2521 Z2808 ZagaR ZdeoR ZfucR ZgatR ZglpR
        ZsrlR ZyihW ZyjfQ
  Ecs:  ECs0920 ECs1857 ECs2479 ECs2893 ECs3563 ECs3665 ECs4009
        ECs4266 ECs4807 ECs5167
  Ype:  YPO0120 YPO0831 YPO1237 YPO1322 YPO1938 YPO3327
  Sty:  STM0164 STM0864 STM1382_1 STM1618 STM1704 STM2837 STM2919
        STM2979 STM3252 STM3262 STM3523 STM3547_1 STM3794 STM4025
        STM4381
  Vch:  VC0486 VC1553 VCA0247 VCA0940
  Pae:  PA1490 PA3583 PA5550
  Hin:  HI0094a HI0615 HI0619 HI1009
  Pmu:  PM0762 PM1344 PM1367 PM1439 PM1964
  Nme:  NMB1561
  NmA:  NMA1749
  Rso:  RSc3044
  Atu:  AGc4939 AGl1900 AGl2687 AGl88 AGpA346 AGpT255
  Sme:  SMb21299 SMb21533 SMc01615 SMc02323 SMc02521 SMc03890
  Bme:  BMEI1750 BMEII0426 BMEII0436 BMEII1093
  Mlo:  mll0711 mll1922 mll3414 mll3600 mll5707 mll7220 mlr5371
        mlr5891 mlr6641 mlr7274 mlr9266
_______

[R] COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB)
  Afu:  AF1240
  Mac:  MA3198
  Mth:  MTH1476
  Tac:  Ta0669
  Tvo:  TVN0931
  Pho:  PH1583
  Pab:  PAB1970
  Pya:  PAE0257 PAE2462
  Sso:  SSO0888 SSO1145
  Ape:  APE2316 APE2548
  Aae:  aq_1410
  Tma:  TM0539
_______

[F] COG1351 Predicted alternative thymidylate synthase
  Hbs:  VNG1325C
  Tac:  Ta1429m
  Tvo:  TVN1446
  Pho:  PH0762
  Pab:  PAB0861
  Pya:  PAE1837
  Sso:  SSO0321
  Ape:  APE2064
  Aae:  aq_640
  Tma:  TM0449
  Cac:  CAC3155
  Cgl:  Cgl1926
  Mtu:  Rv2754c
  MtC:  MT2824
  Mle:  ML1514
  Syn:  sll1635
  Nos:  alr0515
  Hpy:  HP1533
  jHp:  jhp1421
  Cje:  Cj0026c
  Rpr:  RP301
  Rco:  RC0405
  Ctr:  CT632
  Cpn:  CPn0746
  Tpa:  TP1007
  Bbu:  BBA76
_______

[NT] COG1352 Methylase of chemotaxis methyl-accepting proteins
  Afu:  AF1037
  Hbs:  VNG0966G
  Mac:  MA0013 MA1989_2 MA3063 MA3542_2
  Pho:  PH0481
  Pab:  PAB1329
  Tma:  TM0464
  Cac:  CAC0121 CAC2221
  Lin:  lin0691
  Bsu:  BS_cheR
  Bha:  BH1655
  Nos:  all1716_2 all1848
  Eco:  cheR
  EcZ:  ZcheR
  Ecs:  ECs2594
  Ype:  YPO1678
  Sty:  STM1918
  Vch:  VC1399 VC2201 VCA1091
  Pae:  PA0175 PA0412 PA3348 PA3706_1
  Rso:  RSp1405 RSp1647_1
  Cje:  Cj0923c
  Atu:  AGc914
  Sme:  SMa1552 SMb20515_2 SMc03009
  Mlo:  mll9515_1
  Ccr:  CC0435 CC0598 CC3472
  Tpa:  TP0364_2 TP0630
  Bbu:  BB0040 BB0414 BB0670_2
_______

[R] COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs)
  Afu:  AF1867
  Mac:  MA1929 MA1931
  Mth:  MTH1082
  Mja:  MJ1672
  Mka:  MK1297 MK1314
  Tvo:  TVN0112
  Pho:  PH0162
  Pya:  PAE0109
  Sso:  SSO1729 SSO1991
  Aae:  aq_387
  Tma:  TM1794 TM1811
  Mtu:  Rv2823c
  MtC:  MT2890
  Bha:  BH0328
_______

[S] COG1354 Uncharacterized conserved protein
  Afu:  AF1559
  Hbs:  VNG0340C
  Mac:  MA4333
  Mja:  MJ1134
  Tac:  Ta0786
  Tvo:  TVN0808
  Pho:  PH1797
  Pab:  PAB2110
  Aae:  aq_423 aq_aa10
  Tma:  TM0493
  Fnu:  FN0708
  Dra:  DR0557
  Cac:  CAC2061
  Cgl:  Cgl1388
  Mtu:  Rv1709
  MtC:  MT1750
  Mle:  ML1368
  Lla:  L108989
  Spy:  SPy0366
  Spn:  SP1876
  Sau:  SA1326
  Lin:  lin2065
  Bsu:  BS_ypuG
  Bha:  BH1560
  Syn:  slr1530
  Nos:  alr3399
  Pae:  PA3198
  Xfa:  XF2451
  Nme:  NMB1504
  NmA:  NMA1705
  Rso:  RSc2386
  Atu:  AGc3139
  Sme:  SMc02070
  Bme:  BMEI1086
  Mlo:  mll1088
  Ccr:  CC2005
  Tpa:  TP0691
  Uur:  UU345
  Mpu:  MYPU_1150
  Mpn:  MPN300_2
  Mge:  MG213_2
_______

[R] COG1355 Predicted dioxygenase
  Afu:  AF2310
  Mac:  MA0601
  Mth:  MTH45
  Mja:  MJ0403
  Mka:  MK0963
  Tac:  Ta0237
  Tvo:  TVN1358
  Pho:  PH1626
  Pab:  PAB0370
  Pya:  PAE0818
  Sso:  SSO0066
  Ape:  APE1771
  Sce:  YJR008w
  Spo:  SPAC4H3.04c
  Aae:  aq_1336 aq_890
  Tma:  TM0087
  Mlo:  mlr3304_1
_______

[S] COG1356 Uncharacterized protein conserved in archaea
  Hbs:  VNG1598a
  Mth:  MTH916
  Mja:  MJ0173
  Pho:  PH0763
  Pab:  PAB1517
_______

[S] COG1357 Uncharacterized low-complexity proteins
  Hbs:  VNG1732C_1
  Mac:  MA0507 MA1892 MA2354 MA3328
  Dra:  DR2633
  Cac:  CAC0073 CAC0783 CAC1308 CAC1657
  Cgl:  Cgl1395 Cgl1795_2 Cgl1839_2
  Mtu:  Rv3361c
  MtC:  MT3469
  Lla:  L160697
  Lin:  lin0069
  Bsu:  BS_yisX BS_yybG
  Bha:  BH3856
  Syn:  sll0183_1 sll0274 sll0301 sll0414 sll0577 sll1011_2 sll1350
        sll1446 slr0516 slr0719 slr0967 slr1152 slr1519 slr1697_2
        slr1819 slr1851
  Nos:  all0186 all0813 all0958 all1812 all2395 all3048_2 all3114
        all3256 all3305 all3306 all3332 all3740 all3869_1 all4152
        all4220 all4303 all8023_2 alr0433 alr0704 alr1142 alr1298
        alr1331_2 alr1579 alr1746 alr2741 alr2768_1 alr2949 alr3268_2
        alr4610 alr5209 alr7124 alr7125 alr7321 alr9014
  Eco:  yjbI_1 yjcF
  EcZ:  Z0521_1 Z1822_1 Z5935 ZyjbI_1 ZyjcF
  Ecs:  ECs0472_1 ECs1560_2 ECs5021_1 ECs5048 ECs5295
  Ype:  YPO0509 YPO0510
  Sty:  STM1088 STM2066_1 STM2780
  Pae:  PA1981 PA2461 PA4702
  Pmu:  PM0591
  Atu:  AGc1828 AGl2414
  Sme:  SMc04201
  Mlo:  mlr4046
  Ccr:  CC0350 CC0587 CC1890 CC1891 CC2259 CC2260
  Rpr:  RP563
  Rco:  RC0808 RC0850
  Tpa:  TP0405
_______

[J] COG1358 Ribosomal protein HS6-type (S12/L30/L7a)
  Afu:  AF0764
  Hbs:  VNG1157G
  Mac:  MA1521
  Mth:  MTH255
  Mja:  MJ1203
  Mka:  MK1598
  Tac:  Ta1116
  Tvo:  TVN0449
  Pho:  PH1496
  Pab:  PAB0460
  Pya:  PAE3347
  Sso:  SSO0091
  Ape:  APE1818
  Sce:  YDL208w YEL026w YHL033c YLL045c YOR369c
  Spo:  SPAC1782.10c SPAC607.03c SPBC1685.02c SPBC29A3.04 SPCC962.04
  Ecu:  ECU01g0920 ECU02g0750i ECU07g0460 ECU11g0940
  Tma:  TM0774
  Fnu:  FN2021_2
  Cac:  CAC1801 CAC3141
  Lla:  L175450
  Spy:  SPy1722
  Spn:  SP0555
  Sau:  SA0502 SA1111
  Lin:  lin1361
  Bsu:  BS_ybxF BS_ylxQ
  Bha:  BH0128 BH2414
_______

[S] COG1359 Uncharacterized conserved protein
  Hbs:  VNG6254C
  Mac:  MA0329
  Fnu:  FN1347
  Dra:  DR0492 DR2100
  Cac:  CAC3394
  Cgl:  Cgl0891 Cgl0892
  Mtu:  Rv0793 Rv1117 Rv2749
  MtC:  MT1149
  Lla:  L178303 L178621
  Spn:  SP0302
  Lin:  lin0150 lin1079 lin2723
  Bsu:  BS_ycnE BS_yjcS
  Syn:  sll1783
  Eco:  ygiN yneC
  EcZ:  Z2187 ZygiN
  Ecs:  ECs2125 ECs3911
  Ype:  YPO0407 YPO1588 YPO2589
  Sty:  STM3180 STM4079
  Vch:  VCA0636
  Pae:  PA0271 PA0709 PA2048 PA2198 PA3390 PA3566
  Pmu:  PM1279
  Nme:  NMB1575
  NmA:  NMA1764
  Rso:  RSc2595
  Atu:  AGc1346 AGl3301 AGl680
  Sme:  SMa0325 SMa0558 SMa1971 SMb21023 SMc01833
  Mlo:  mll2956 mlr2781
  Ccr:  CC0194 CC1971 CC2132
_______

[N] COG1360 Flagellar motor protein
  Aae:  aq_1001 aq_1002
  Tma:  TM0677
  Cac:  CAC0305 CAC1845
  Lin:  lin0694
  Bsu:  BS_motB BS_ytxE
  Bha:  BH3239
  Eco:  mbhA motB
  EcZ:  ZmbhA ZmotB
  Ecs:  ECs0256 ECs2599
  Ype:  YPO0514_2 YPO0747 YPO1665 YPO2723_2
  Sty:  STM0282_2 STM1922
  Vch:  VC0893 VC1763
  Pae:  PA0078_2 PA1461 PA4953
  Rso:  RSp1410 RSp1482
  Hpy:  HP0816
  jHp:  jhp0752
  Cje:  Cj0336c
  Atu:  AGc1002 AGl1060_2 AGl2177
  Sme:  SMc03042 SMc03992
  Bme:  BMEI0324 BMEII0154
  Mlo:  mlr2348_2 mlr2359_2 mlr2931 mlr3926
  Ccr:  CC1573
  Tpa:  TP0724
  Bbu:  BB0280
_______

[M] COG1361 S-layer domain
  Afu:  AF0214 AF1004 AF1019 AF1230 AF1231 AF1468 AF1818
  Hbs:  VNG0001H VNG1475C
  Mac:  MA0284 MA0285 MA1119 MA2273 MA2549 MA2838 MA3172
        MA3584 MA3958 MA3961
  Mja:  MJ0795 MJ1506 MJ1561
  Tac:  Ta1063
  Tvo:  TVN0518
  Pho:  PH0286
  Pab:  PAB1102
  Pya:  PAE3356
  Sso:  SSO0011 SSO0687 SSO1079
  Tma:  TM0838
_______

[E] COG1362 Aspartyl aminopeptidase
  Sce:  YHR113w YKL103c
  Spo:  SPAC4F10.02
  Tma:  TM0365
  Fnu:  FN0775
  Cac:  CAC0607 CAC1091
  Cgl:  Cgl1463
  Mtu:  Rv0800
  MtC:  MT0821
  Mle:  ML2213
  Pae:  PA3247
  Bbu:  BB0366 BB0627
_______

[G] COG1363 Cellulase M and related proteins
  Afu:  AF1795
  Hbs:  VNG1498G
  Mac:  MA3849
  Mth:  MTH437
  Mja:  MJ0555
  Mka:  MK0383
  Pho:  PH0519 PH0737 PH1527 PH1821
  Pab:  PAB0437 PAB0869 PAB2096 PAB2375
  Pya:  PAE1385 PAE1474
  Ape:  APE1335
  Tma:  TM1048 TM1049 TM1050
  Fnu:  FN0999
  Dra:  DR0229 DR0946
  Cac:  CAC0214 CAC0215 CAC0216 CAC0690
  Lla:  L193909
  Spy:  SPy0115
  Spn:  SP0627 SP1865
  Sau:  SA1198 SA1566 SA2244
  Lin:  lin0981 lin1180 lin1652
  Bsu:  BS_yhfE BS_ysdC BS_ytoP
  Bha:  BH3132 BH3257
  Nos:  all3633
  Eco:  frvX sgcX ypdE
  EcZ:  Z3649 ZfrvX
  Ecs:  ECs3264 ECs4824
  Sty:  STM1612
  Pae:  PA2172 PA3461
  Sme:  SMb20466
  Uur:  UU280
  Mpu:  MYPU_7300
_______

[E] COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)
  Afu:  AF1147
  Mac:  MA3564
  Mth:  MTH182
  Mja:  MJ0186
  Mka:  MK0865
  Sce:  YMR062c
  Spo:  SPBC1271.14
  Aae:  aq_970
  Tma:  TM1783
  Dra:  DR1704
  Cac:  CAC2391 CAC3020
  Cgl:  Cgl1362
  Mtu:  Rv1653
  MtC:  MT1691
  Mle:  ML1407
  Lla:  L0105
  Sau:  SA0177
  Lin:  lin1632
  Bsu:  BS_argJ
  Bha:  BH2899
  Syn:  sll1883
  Nos:  alr2073 alr4235
  Pae:  PA4402
  Nme:  NMB2005
  NmA:  NMA0435
  Rso:  RSc2833
  Atu:  AGl2624
  Sme:  SMc02450
  Bme:  BMEI0124
  Mlo:  mll3461
  Ccr:  CC3066
_______

[R] COG1365 Predicted ATPase (PP-loop superfamily)
  Mth:  MTH271
  Mja:  MJ1638
  Mka:  MK1505
  Pho:  PH1943
  Pab:  PAB1127
_______

[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
  Tma:  TM1081 TM1442
  Fnu:  FN1914
  Dra:  DRB0024_2 DRB0025
  Cac:  CAC2308
  Mtu:  Rv0516c Rv1364c_4 Rv1365c Rv1904 Rv2638 Rv3687c
  MtC:  MT0537 MT1410_4 MT1411 MT1955 MT2716 MT3789
  Sau:  SA1871
  Lin:  lin0204_2 lin0792_2 lin0888_2 lin0889 lin0892 lin1683_2 lin1956_2
  Bsu:  BS_ispU_2 BS_rsbR_2 BS_rsbS BS_rsbV BS_spoIIAA BS_yetI_2 BS_yezB
        BS_yojH_2 BS_yqhA_2 BS_ytvA_2
  Bha:  BH0523_2 BH0524 BH0527 BH1536
  Syn:  slr1856 slr1859 slr1912 ssr1600
  Nos:  all0648 all1087 all2283 all2285_1 all4160_1 alr3758 alr4329
        alr4800 asr1156
  Vch:  VCA1087 VCA1097
  Pae:  PA2797 PA3347 PA4452
  Atu:  AGc908 AGl60
  Sme:  SMc03005
  Ccr:  CC0431
  Ctr:  CT424 CT765
  Cpn:  CPn0511 CPn0909
  Tpa:  TP0220 TP0233 TP0540
_______

[L] COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Afu:  AF1868
  Aae:  aq_382
  Tma:  TM1795
  Bha:  BH0327
_______

[M] COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
  Tma:  TM1703
  Cac:  CAC0888 CAC1434 CAC2431 CAC2802
  Lla:  L13927
  Spy:  SPy0793 SPy0807
  Sau:  SA0674
  Lin:  lin0647 lin0927
  Bsu:  BS_yflE BS_yfnI BS_yqgS BS_yvgJ
  Eco:  mdoB
  EcZ:  ZmdoB
  Ecs:  ECs5319
  Sty:  STM4541
  Vch:  VCA0802
  Pae:  PA1115 PA1689
  Hin:  HI0275 HI1246
  Pmu:  PM1683
  Nme:  NMB1508
  NmA:  NMA0408 NMA1708
  Hpy:  HP0578
  jHp:  jhp0525
  Cje:  Cj1055c
  Atu:  AGc3053
  Sme:  SMc00195 SMc02270
  Mlo:  mll4258 mll7848
_______

[J] COG1369 RNase P/RNase MRP subunit POP5
  Afu:  AF0489
  Hbs:  VNG1279H
  Mac:  MA1781
  Mth:  MTH687
  Mja:  MJ0494
  Mka:  MK0386
  Pho:  PH1481
  Pab:  PAB0467
  Sso:  SSO0739
  Ape:  APE1161
  Sce:  YAL033w
  Spo:  SPCC830.09c
_______

[O] COG1370 Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit
  Afu:  AF0708
  Hbs:  VNG0421C
  Mac:  MA0121
  Mth:  MTH176_2
  Mja:  MJ0436_2
  Mka:  MK0956
  Tac:  Ta1493_2
  Tvo:  TVN1497_2
  Pho:  PH1116_2
  Pab:  PAB0740_2
  Pya:  PAE0786
  Sso:  SSO5542
  Ape:  APE2020
_______

[S] COG1371 Uncharacterized conserved protein
  Afu:  AF1495
  Hbs:  VNG1456H
  Mac:  MA0265
  Mth:  MTH1598
  Mja:  MJ0024
  Mka:  MK0228
  Tac:  Ta0680
  Tvo:  TVN0933
  Pho:  PH1536
  Pab:  PAB1946
  Pya:  PAE1678
  Sso:  SSO0690
  Ape:  APE0148
  Aae:  aq_2128
  Tma:  TM1083
  Mtu:  Rv2630
  MtC:  MT2705
_______

[L] COG1372 Intein/homing endonuclease
  Mja:  MJ0043_2 MJ0262_2 MJ0542_2 MJ0682_2 MJ0781_2 MJ0782_2 MJ0832_2
        MJ0832_4 MJ0885_2 MJ0885_4 MJ1042_2 MJ1043_2 MJ1054_2 MJ1124_2
        MJ1420_2 MJ1422_2 MJ1422_4 MJ1422_6 MJ1512_2
  Mka:  MK0006_2 MK0310 MK0486_2 MK0679_2 MK1637 MK1638 MK1673_2
        MK1682_2
  Tac:  Ta0004_2
  Tvo:  TVN0052_2
  Pho:  PH0112_2 PH0121_2 PH0263_2 PH0363_2 PH0452_2 PH0606_2 PH0606_4
        PH0650_2 PH0800_2 PH1095_2 PH1110_2 PH1602_2 PH1947_2 PH1975_2
  Pab:  PAB0068_2 PAB0068_4 PAB0383_2 PAB0755_2 PAB1057_2 PAB1057_4 PAB1057_6
        PAB1313_2 PAB1457_2 PAB1899_2 PAB2373_2 PAB2373_4 PAB2378_2 PAB2404_2
  Ape:  APE0745_2
  Sce:  YDL185w_2 YDL227c
  Aae:  aq_1505_2
  Dra:  DR2374_2
  Mtu:  Rv0058_2 Rv1461_2 Rv2737c_2
  MtC:  MT0064_2 MT1508_2 MT2806_2
  Mle:  ML0006_2 ML0593_2 ML0987_2
  Bsu:  BS_yosO_2
  Syn:  sll1360_2 sll2005_2 slr0833_2
  Nos:  all0578_2 all4035
_______

[R] COG1373 Predicted ATPase (AAA+ superfamily)
  Mac:  MA1581 MA1941 MA2427 MA3153 MA3577
  Mja:  MJ1544 MJ1637
  Tac:  Ta0724
  Pho:  PH0567 PH0691 PH0837 PH0922
  Pab:  PAB0083 PAB0600 PAB0633 PAB1355 PAB1420 PAB1562
  Pya:  PAE0172 PAE1267 PAE2503
  Sso:  SSO1155 SSO1289 SSO1418 SSO1468 SSO1562 SSO1563 SSO1963
  Tma:  TM0616 TM1265
  Fnu:  FN0672 FN1101 FN1382 FN1715
  Mtu:  Rv0597c Rv2008c Rv3179
  MtC:  MT0627 MT2064 MT3270 MT3393
  Spn:  SP0298
  Lin:  lin0154
  Hin:  HI1038
  Hpy:  HP1321
  jHp:  jhp1241
  Cje:  Cj1533c
  Mlo:  mlr9349
  Rco:  RC1031 RC1190 RC1191 RC1192 RC1193
_______

[J] COG1374 Protein involved in ribosomal biogenesis, contains PUA domain
  Afu:  AF0058
  Mja:  MJ1410
  Mka:  MK0608
  Pho:  PH0281
  Pab:  PAB0176
  Ape:  APE0516
  Sce:  YPL211w
  Spo:  SPCC320.11c
  Ecu:  ECU10g0670
_______

[S] COG1376 Uncharacterized protein conserved in bacteria
  Tma:  TM1686
  Cac:  CAC0011 CAC0747 CAC1822_2 CAC2416_1 CAC2631
  Cgl:  Cgl0544 Cgl2423
  Mtu:  Rv0116c Rv0192 Rv0483 Rv1433 Rv2518c
  MtC:  MT0125 MT0202 MT0501 MT1477 MT2594
  Mle:  ML0426 ML0569 ML2446 ML2664
  Bsu:  BS_yciB BS_ykuD BS_yqjB
  Bha:  BH0811 BH1465
  Syn:  sll0670 slr0769
  Nos:  all3278 all4768 all4770
  Eco:  erfK ybiS ycfS ynhG
  EcZ:  ZerfK ZybiS ZycfS ZynhG
  Ecs:  ECs0896 ECs1491 ECs2385 ECs2785
  Sty:  STM0837 STM1215 STM1375 STM2015
  Vch:  VCA0058
  Pae:  PA0732 PA2854
  Nme:  NMB0471
  NmA:  NMA2014
  Rso:  RSc0095
  Atu:  AGc1197 AGc1541 AGc1542 AGc2380_1 AGc3870_2 AGc4244 AGc80
        AGl2979 AGpA272
  Sme:  SMb21516 SMb21573_2 SMc00039 SMc00924 SMc00925 SMc01200 SMc01374_1
        SMc01575_2 SMc02582 SMc02636 SMc04338
  Bme:  BMEI0196_2 BMEI0848 BMEI1369 BMEI1809 BMEI1893 BMEII1059
  Mlo:  mll0608 mll1184 mll1519 mll3427_2 mll3651 mll5027 mll6473
        mll6923 mll7632 mll9547 mll9583_2 mlr1998 mlr2376 mlr5313
_______

[NU] COG1377 Flagellar biosynthesis pathway, component FlhB
  Aae:  aq_2014
  Tma:  TM0909
  Cac:  CAC2148_2
  Lin:  lin0687
  Bsu:  BS_flhB
  Bha:  BH2439
  Eco:  flhB
  EcZ:  Z4185 ZflhB
  Ecs:  ECs2590 ECs3721
  Ype:  YPO0706 YPO1790
  Sty:  STM1914 STM2887
  Buc:  BU240
  Vch:  VC2120
  Pae:  PA1449
  Rso:  RSp0864 RSp1394
  Hpy:  HP0770
  jHp:  jhp0707
  Cje:  Cj0335
  Atu:  AGc991
  Sme:  SMc03018
  Bme:  BMEII1114
  Mlo:  mll2899
  Ccr:  CC1077
  Ctr:  CT091
  Cpn:  CPn0322
  Tpa:  TP0715
  Bbu:  BB0272
_______

[K] COG1378 Predicted transcriptional regulators
  Afu:  AF0026 AF0213 AF1009 AF1232
  Hbs:  VNG1451C VNG1886C VNG1903Cm
  Mac:  MA0287 MA0359 MA1835 MA2057 MA2207 MA2212 MA3151
        MA4622
  Mth:  MTH1454
  Mja:  MJ1623_2
  Mka:  MK0253
  Tac:  Ta0134 Ta0685 Ta0890 Ta1324
  Tvo:  TVN0213 TVN0972 TVN1149
  Pho:  PH0751 PH0799 PH1034
  Pab:  PAB0838
  Pya:  PAE2282
  Sso:  SSO0426 SSO2073
  Ape:  APE0025 APE0153
  Dra:  DR0005
  Bsu:  BS_yrhO
_______

[S] COG1379 Uncharacterized conserved protein
  Mac:  MA0641
  Mth:  MTH1305
  Mja:  MJ0043_1 MJ0043_3
  Mka:  MK0424
  Pho:  PH1535
  Pab:  PAB0431
  Bsu:  BS_yqxK
  Bha:  BH1525
_______

[R] COG1380 Putative effector of murein hydrolase LrgA
  Mac:  MA3263
  Pho:  PH1801
  Pab:  PAB0239
  Fnu:  FN0467 FN1532
  Dra:  DR1450
  Cac:  CAC0612
  Lla:  L172519
  Sau:  SA0252 SA2329
  Bsu:  BS_ysbA BS_ywbH BS_yxaC_1
  Bha:  BH3269
  Eco:  yohJ
  EcZ:  ZyohJ
  Ecs:  ECs3033
  Ype:  YPO1514
  Sty:  STM2181 STM4271
  Vch:  VC1233 VC2101
  Pae:  PA3432 PA4014
  Hin:  HI1297
  Pmu:  PM0880
  Nme:  NMB2003
  NmA:  NMA0437
  Rso:  RSc2669
  Bme:  BMEI1597
_______

[L] COG1381 Recombinational DNA repair protein (RecF pathway)
  Fnu:  FN1492
  Dra:  DR0819
  Cac:  CAC1309
  Cgl:  Cgl2232
  Mtu:  Rv2362c
  MtC:  MT2431
  Mle:  ML0633
  Lla:  L1006
  Spy:  SPy0021
  Spn:  SP0036
  Sau:  SA1395
  Lin:  lin1497
  Bsu:  BS_yqxN
  Bha:  BH1369
  Syn:  slr0181
  Nos:  alr4175
  Eco:  recO
  EcZ:  ZrecO
  Ecs:  ECs3431
  Ype:  YPO2720
  Sty:  STM2579
  Vch:  VC2459
  Pae:  PA0772
  Hin:  HI0332
  Pmu:  PM1867
  Xfa:  XF2248
  Nme:  NMB0447
  NmA:  NMA2038
  Rso:  RSc1065
  Atu:  AGc1915
  Sme:  SMc02635
  Bme:  BMEI1285
  Mlo:  mlr7769
  Ccr:  CC1564
  Rpr:  RP548m
  Rco:  RC0812
  Ctr:  CT470
  Cpn:  CPn0589
  Tpa:  TP0636
  Uur:  UU492
  Mpu:  MYPU_1590
_______

[O] COG1382 Prefoldin, chaperonin cofactor
  Afu:  AF1150
  Hbs:  VNG0234C
  Mac:  MA3850
  Mth:  MTH678
  Mja:  MJ0987
  Mka:  MK0375
  Tac:  Ta1137
  Tvo:  TVN1213
  Pho:  PH0532
  Pab:  PAB1364
  Pya:  PAE2199
  Sso:  SSO0730
  Ape:  APE1440
  Sce:  YLR200w YNL153c
  Spo:  SPAC227.05 SPAC3A11.13
_______

[J] COG1383 Ribosomal protein S17E
  Afu:  AF0911
  Hbs:  VNG1433G
  Mac:  MA4472
  Mth:  MTH803
  Mja:  MJ0245
  Mka:  MK1608
  Tac:  Ta0589
  Tvo:  TVN0647
  Pho:  PH1316a
  Pab:  PAB7207
  Pya:  PAE0804
  Sso:  SSO5561
  Ape:  APES067
  Sce:  YDR447c YML024w
  Spo:  SPBC839.05c SPCC24B10.09
  Ecu:  ECU02g0770
_______

[J] COG1384 Lysyl-tRNA synthetase (class I)
  Afu:  AF1216
  Hbs:  VNG2017G
  Mac:  MA0534
  Mth:  MTH1542
  Mja:  MJ0539
  Mka:  MK0986
  Tac:  Ta1163
  Tvo:  TVN1219
  Pho:  PH0224
  Pab:  PAB0139
  Ape:  APE0161
  Bme:  BMEII0500
  Mlo:  mll5634
  Ccr:  CC0084
  Rpr:  RP371
  Rco:  RC0505
  Tpa:  TP0644
  Bbu:  BB0659
_______

[S] COG1385 Uncharacterized protein conserved in bacteria
  Aae:  aq_165
  Tma:  TM1380
  Fnu:  FN1215
  Dra:  DR1520
  Cac:  CAC1285
  Cgl:  Cgl2237
  Mtu:  Rv2372c
  MtC:  MT2441
  Mle:  ML0626
  Lla:  L105256
  Spy:  SPy1987
  Spn:  SP1781
  Sau:  SA1406
  Lin:  lin1507
  Bsu:  BS_yqeU
  Bha:  BH1350
  Syn:  slr0722
  Nos:  alr1349
  Eco:  yggJ
  EcZ:  ZyggJ
  Ecs:  ECs3822
  Ype:  YPO0934
  Sty:  STM3094
  Buc:  BU410
  Vch:  VC0469
  Pae:  PA0419 PA5071
  Hin:  HI0303
  Pmu:  PM1868
  Xfa:  XF0190
  Nme:  NMB1925
  NmA:  NMA0528
  Rso:  RSc2763
  Hpy:  HP0374
  jHp:  jhp1007
  Cje:  Cj0156c
  Atu:  AGc1169
  Sme:  SMc00826
  Bme:  BMEII0529
  Mlo:  mll6903
  Ccr:  CC3415
  Rpr:  RP168
  Rco:  RC0210
  Tpa:  TP0032 TP0276
  Bbu:  BB0062 BB0358
  Uur:  UU301
  Mpu:  MYPU_5420
_______

[K] COG1386 Predicted transcriptional regulator containing the HTH domain
  Afu:  AF1580
  Mac:  MA4332_1
  Tac:  Ta0596
  Tvo:  TVN0624
  Pho:  PH1891
  Pab:  PAB2162
  Tma:  TM0494
  Fnu:  FN0757
  Dra:  DR1861
  Cac:  CAC2060
  Cgl:  Cgl1391
  Mtu:  Rv1710
  MtC:  MT1751
  Mle:  ML1369
  Lla:  L108430
  Spy:  SPy0367
  Spn:  SP1875
  Sau:  SA1325
  Lin:  lin2064
  Bsu:  BS_ypuH
  Bha:  BH1561
  Syn:  slr1577
  Nos:  all5166
  Pae:  PA3197
  Xfa:  XF2452_1
  Nme:  NMB0739_2
  NmA:  NMA0951
  Rso:  RSc1285
  Atu:  AGc3137
  Sme:  SMc02069
  Bme:  BMEI1085
  Mlo:  mll1087 mll9345 mll9646 mlr6199 mlr9362 msr6263
  Ccr:  CC2004
  Tpa:  TP0458
  Uur:  UU346
  Mpu:  MYPU_1160
  Mpn:  MPN301
  Mge:  MG214
_______

[ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family
  Afu:  AF1233 AF1550
  Mac:  MA0727_2 MA1289 MA1291
  Mth:  MTH550_2 MTH576
  Mja:  MJ1295
  Mka:  MK0169 MK1681
  Tac:  Ta0758_2
  Tvo:  TVN0856_2
  Pho:  PH1316
  Pab:  PAB0560
  Sce:  YFR025c
  Spo:  SPCC1672.01
  Aae:  aq_1422_2
  Tma:  TM0804
  Fnu:  FN0428
  Dra:  DR0467_2 DR0470
  Cac:  CAC0509 CAC2727
  Mtu:  Rv3856c
  MtC:  MT3971
  Lla:  L37351
  Sau:  SA0990_2
  Lin:  lin0579 lin1194_2
  Bsu:  BS_yshC_2 BS_ytvP
  Bha:  BH3107_2 BH3206
  Eco:  ycdX
  EcZ:  ZycdX
  Ecs:  ECs1411
  Ype:  YPO2037
  Sty:  STM1136
  Vch:  VCA0894
  Sme:  SMb21226
_______

[M] COG1388 FOG: LysM repeat
  Aae:  aq_652_1
  Dra:  DR0910 DR1325_1 DR1749_1
  Cac:  CAC1232_1 CAC2903
  Cgl:  Cgl1707
  Mtu:  Rv1288_1
  MtC:  MT1326_1
  Lla:  L127411_2 L137446_2 L68758_2
  Sau:  SA0423_1 SA0620_1 SA0710_1
  Lin:  lin0591_1 lin0591_3 lin0879_2 lin1341 lin1703 lin2666_1 lin2838_2
  Bsu:  BS_lytE_1 BS_xlyA_2 BS_yhdD_1 BS_ykvP_2 BS_yneA BS_yocH_1 BS_yojL_1
        BS_yrbA
  Bha:  BH0693 BH1221_1 BH1803_1 BH2879_1
  Ype:  YPO0370_2
  Vch:  VC0344_2
  Pae:  PA4947_2
  Hin:  HI0066_2
  Pmu:  PM0903_2
  Ctr:  CT601 CT759
  Cpn:  CPn0780 CPn0902
  Bbu:  BB0625_1
_______

[L] COG1389 DNA topoisomerase VI, subunit B
  Afu:  AF0652
  Hbs:  VNG0885G
  Mac:  MA1587
  Mth:  MTH1007
  Mja:  MJ1028
  Mka:  MK0921
  Pho:  PH1564
  Pab:  PAB0407
  Pya:  PAE2217
  Sso:  SSO0968
  Ape:  APE0706
_______

[C] COG1390 Archaeal/vacuolar-type H+-ATPase subunit E
  Afu:  AF1163
  Hbs:  VNG2142G
  Mac:  MA4155
  Mth:  MTH958
  Mja:  MJ0220
  Mka:  MK1014
  Tac:  Ta0001
  Tvo:  TVN0049
  Pho:  PH1978
  Pab:  PAB1182
  Pya:  PAE0662
  Ape:  APE0409
  Sce:  YOR332w
  Spo:  SPAC11E3.07
  Ecu:  ECU05g0405
  Fnu:  FN1739
  Dra:  DR0697
  Ctr:  CT310
  Cpn:  CPn0086
  Tpa:  TP0424
  Bbu:  BB0096
_______

[OT] COG1391 Glutamine synthetase adenylyltransferase
  Aae:  aq_1774
  Cgl:  Cgl2179
  Mtu:  Rv2221c
  MtC:  MT2279
  Mle:  ML1630
  Eco:  glnE
  EcZ:  ZglnE
  Ecs:  ECs3936
  Ype:  YPO0653
  Sty:  STM3201
  Vch:  VC2438
  Pae:  PA5014
  Hin:  HI0069
  Pmu:  PM0375
  Nme:  NMB0224
  NmA:  NMA0035
  Rso:  RSc2656
  Atu:  AGc1798
  Sme:  SMc02368
  Bme:  BMEI1327
  Mlo:  mlr7698
  Ccr:  CC2753
_______

[P] COG1392 Phosphate transport regulator (distant homolog of PhoU)
  Afu:  AF1799 AF2149
  Mac:  MA2934
  Mth:  MTH1689
  Mja:  MJ0629
  Pho:  PH0637 PH1389
  Pab:  PAB0513 PAB0929
  Sso:  SSO2460
  Tma:  TM0260 TM0914
  Dra:  DR0924
  Cac:  CAC3094
  Sau:  SA0618
  Lin:  lin2350
  Bsu:  BS_ykaA
  Vch:  VC2441
  Pae:  PA5208
  Hin:  HI1603
  Pmu:  PM0250
  Rso:  RSc1312
  Atu:  AGl497
  Sme:  SMc02862
  Mlo:  mlr8369 msr8368
  Ctr:  CT691
  Cpn:  CPn0681
_______

[P] COG1393 Arsenate reductase and related proteins, glutaredoxin family
  Fnu:  FN0052
  Dra:  DR0136
  Cac:  CAC0417
  Cgl:  Cgl1070
  Mle:  ML0247
  Lla:  L132585 L145757 L158193 L196017 L72684 L73853 L862989
  Spy:  SPy0410 SPy0891 SPy1249 SPy2115
  Spn:  SP0189 SP1334 SP1348 SP1405 SP1462
  Sau:  SA0759 SA0856
  Lin:  lin2295 lin2520
  Bsu:  BS_yjbD BS_yqgZ BS_yusI
  Bha:  BH2861 BH3485
  Nos:  all0195
  Eco:  arsC yffB yfgD yfjU
  EcZ:  Z3758 ZarsC ZyffB
  Ecs:  ECs3333 ECs3357 ECs4375
  Ype:  YPO3052 YPO3070
  Sty:  STM2482 STM2495
  Vch:  VC2150 VC2165
  Pae:  PA0950 PA3664
  Hin:  HI0103 HI0236
  Pmu:  PM1023 PM1130 PM1944
  Xfa:  XF0115
  Nme:  NMB0005 NMB1239
  NmA:  NMA0252 NMA1408
  Rso:  RSc1391 RSc3271
  Cje:  Cj0717
  Atu:  AGc2748 AGc473
  Sme:  SMc00386 SMc02649
  Bme:  BMEI0992 BMEI1557
  Mlo:  mll2167 mlr7393
  Ccr:  CC1503 CC1642
  Uur:  UU176
  Mpn:  MPN266
  Mge:  MG127
_______

[C] COG1394 Archaeal/vacuolar-type H+-ATPase subunit D
  Afu:  AF1168
  Hbs:  VNG2135G
  Mac:  MA4160
  Mth:  MTH953
  Mja:  MJ0615
  Mka:  MK1674
  Tac:  Ta0006
  Tvo:  TVN0054
  Pho:  PH1972
  Pab:  PAB2379
  Pya:  PAE0758
  Sso:  SSO0566
  Ape:  APE0402
  Sce:  YEL051w
  Spo:  SPCC965.03
  Ecu:  ECU10g0140
  Fnu:  FN1733
  Dra:  DR0702
  Spy:  SPy0157
  Spn:  SP1315
  Ctr:  CT306
  Cpn:  CPn0090
  Tpa:  TP0428 TP0527
  Bbu:  BB0092
_______

[K] COG1395 Predicted transcriptional regulator
  Afu:  AF1787
  Hbs:  VNG2112C
  Mac:  MA3524
  Mth:  MTH967
  Mja:  MJ1164
  Mka:  MK1005
  Tac:  Ta1363
  Tvo:  TVN0291
  Pho:  PH1808
  Pab:  PAB2104
  Pya:  PAE1627
  Sso:  SSO0942
  Ape:  APE0778
_______

[K] COG1396 Predicted transcriptional regulators
  Mac:  MA1424 MA2914
  Mth:  MTH659 MTH700
  Pya:  PAE3208
  Aae:  aq_1018
  Tma:  TM0656 TM1330
  Fnu:  FN0555 FN1928 FN1997 FN2065 FN2076
  Dra:  DR1029m DR2574 DRA0128
  Cac:  CAC0186_1 CAC0324_1 CAC0465 CAC0549 CAC0841 CAC0957_1 CAC0958_1
        CAC1043_1 CAC1214_1 CAC1559 CAC1578 CAC1843 CAC1867 CAC1946
        CAC1947 CAC2055 CAC2490_1 CAC3247 CAC3472_1 CAC3639 CAC3645
        CAC3646 CAC3695 CAP0040_1 CAP0149_1
  Cgl:  Cgl0365_1 Cgl0484 Cgl0665 Cgl0678_1 Cgl1206 Cgl1319 Cgl1771
        Cgl1917 Cgl2718 Cgl2728 Cgl2857
  Mtu:  Rv0023_1 Rv0465c_1 Rv0474 Rv1129c_1 Rv1956 Rv2017_1 Rv2021c
        Rv2515c_1 Rv2745c Rv3183
  MtC:  MT0026_1 MT0481_1 MT0491 MT1161_1 MT2005 MT2073_1 MT2077
        MT2591_1 MT2816 MT3275
  Lla:  L0250_1 L102100_1 L10283 L105494 L116756 L12334 L126656
        L135065 L135296 L162840 L17640 L179789 L19959 L38687
        L41422 L43680 L48903 L53055 L53427 L61369 L69000
        L7043 L70850 L77381 L80045
  Spy:  SPy0037 SPy0496 SPy0533 SPy0657_1 SPy0658 SPy0939_1 SPy1088
        SPy1198_1 SPy1485 SPy1486_1 SPy1834 SPy1861 SPy2042 SPy2125_1
        SPy2126
  Spn:  SP0141 SP0163 SP0584 SP1050 SP1057 SP1115 SP1130
        SP1144 SP1809_1 SP1936 SP1946 SP1989 SP2090
  Sau:  SA0142_1 SA0949 SA1804 SA1805_1 SA1833 SA2495 SAP028
        SAS010
  Lin:  lin0073 lin0161 lin0350 lin0351 lin0663 lin0796 lin0864
        lin1230 lin1234 lin1235 lin1761 lin1762 lin2191 lin2421
        lin2422 lin2428 lin2541 lin2605 lin2607 lin2924 pli0006
  Bsu:  BS_ansR BS_sinR BS_slr BS_xre BS_yazB BS_ydcN BS_yobD
        BS_yonR BS_yopO BS_yqaE BS_yqaF BS_yvaN BS_yvaO BS_yvzC
  Bha:  BH0096 BH0345 BH0346 BH0944 BH1288 BH1443 BH1444
        BH1814_1 BH2125 BH2909 BH3548 BH3549
  Nos:  all0603 all1670 all2512_3 all2962 all7501 alr1392 alr1976
        asl0125 asl7034 asr2041
  Eco:  dicA hipB nadR_1 ycjC ydcN ygiT
  EcZ:  Z1333 Z1447_1 Z1932 Z2045 Z2400 Z2969 Z5888
        Z5987 Z6073 ZnadR_1 ZycjC ZydcN
  Ecs:  ECs1069 ECs1664 ECs1765 ECs1876 ECs1941 ECs2037 ECs2279
        ECs2620 ECs5252 ECs5344 ECs5348_1
  Ype:  YPO0444_1 YPO0881 YPO0883 YPO2273 YPO2320 YPO3485 YPO3612
        YPO4028 YPPCP1.08c
  Sty:  STM0898A STM1012 STM1605 STM1664 STM2195 STM2628 STM2748
        STM4042A STM4580_1
  Vch:  VC0176 VC0814 VC1455 VC1464 VC1803 VC1968 VCA0279
        VCA0958_1
  Pae:  PA0048 PA0225 PA0535 PA1263 PA1359 PA1879 PA1884
        PA2251 PA2312 PA2780 PA3055 PA3056 PA3260 PA4499
        PA4987 PA5301
  Hin:  HI0659 HI0666.1 HI1458m
  Pmu:  PM1387_1
  Xfa:  XF0298 XF0496_1 XF0534 XF0914 XF1720 XF1996 XF2491
        XFa0001
  Nme:  NMB0121 NMB1007 NMB1204 NMB2012_1
  NmA:  NMA0153 NMA1225 NMA1282 NMA1375 NMA1838
  Rso:  RSc1097 RSc1159 RSc1447 RSc1907 RSc2610 RSc2661 RSc3132
        RSc3149 RSc3278 RSp0801 RSp0962 RSp1252 RSp1320 RSp1351
  Atu:  AGc1081_1 AGc1347 AGc18 AGc3371 AGc418 AGc630 AGc784_1
        AGl1270 AGl1677 AGl2480_1 AGl2513 AGl2985 AGpT183
  Sme:  SMa0594 SMa1076 SMb20754_1 SMb20935 SMb21035 SMb21117 SMb21187_2
        SMc00089 SMc00351 SMc00377 SMc00769_1 SMc01110 SMc01269 SMc01646
        SMc02184 SMc02620 SMc02783 SMc04387
  Bme:  BMEI0410_1 BMEI0802_1 BMEI1226_1 BMEI1657 BMEI1680 BMEI1971 BMEI2050
        BMEII0372
  Mlo:  mll1444 mll1636 mll2068 mll2952 mll5804 mll6996 mll7326
        mll7669 mll7704 mll9232 mll9244 mll9374_1 mlr1218 mlr1279
        mlr2113 mlr2136_1 mlr2155 mlr4157 mlr4548 mlr4574 mlr4587
        mlr5544 mlr6265 mlr6529_1 mlr6668 mlr7385 mlr8432 msl5762
        msl6954 msr0960 msr6106 msr6108
  Ccr:  CC0051 CC1006 CC1763_1 CC1994 CC2076 CC2251 CC2330
        CC2673 CC2705 CC2706 CC2736 CC2771 CC3164 CC3497
  Rpr:  RP497 RP766
  Rco:  RC0496 RC0668 RC1195
  Tpa:  TP0461
_______

[O] COG1397 ADP-ribosylglycohydrolase
  Afu:  AF1724
  Mac:  MA4144
  Mja:  MJ1187
  Aae:  aq_534
  Dra:  DR1958
  Cac:  CAC0339
  Spn:  SP1044
  Nos:  alr1337 alr3188
  Eco:  yegU
  EcZ:  Z3262
  Ecs:  ECs2902
  Sty:  STM2143 STM4067
  Mlo:  mll1744
_______

[I] COG1398 Fatty-acid desaturase
  Sce:  YGL055w_1
  Spo:  SPCC1281.06c_1
  Syn:  sll0541
  Nos:  all1599 all4991
  Pae:  PA0286
  Rso:  RSc2450 RSp0792
  Rpr:  RP038_1
  Rco:  RC0062_1
_______

[R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein
  Aae:  aq_1103
  Tma:  TM0151
  Dra:  DR2570
  Cac:  CAC1744
  Cgl:  Cgl2023
  Mtu:  Rv2926c
  MtC:  MT2996
  Mle:  ML1660
  Lla:  L39365
  Spy:  SPy0334
  Spn:  SP1280
  Sau:  SA0975
  Lin:  lin2154
  Bsu:  BS_ylbN
  Bha:  BH2584
  Syn:  slr0816
  Nos:  alr3417
  Eco:  yceD
  EcZ:  ZyceD
  Ecs:  ECs1466
  Ype:  YPO1594
  Sty:  STM1190
  Vch:  VC2026
  Pae:  PA2971
  Hin:  HI0159
  Pmu:  PM1911
  Xfa:  XF1815
  Nme:  NMB1910
  NmA:  NMA0545
  Rso:  RSc1047
_______

[U] COG1400 Signal recognition particle 19 kDa protein
  Afu:  AF1258
  Hbs:  VNG1367G
  Mac:  MA0292
  Mth:  MTH165
  Mja:  MJ1034
  Mka:  MK1551
  Tac:  Ta1039
  Tvo:  TVN0556
  Pho:  PHS054
  Pab:  PAB2061
  Pya:  PAE3332
  Sso:  SSO0165
  Ape:  APE0772
  Sce:  YML105c
  Spo:  SPCC126.15c
  Ecu:  ECU08g0800
_______

[V] COG1401 GTPase subunit of restriction endonuclease
  Mac:  MA2119
  Mth:  MTH501
  Pho:  PH0873
  Pya:  PAE3687
  Sso:  SSO1328
  Aae:  aq_647
  Dra:  DRA0266 DRB0143
  Spn:  SP1251
  Bsu:  BS_ydiS
  Syn:  sll0709
  Eco:  mcrB
  Ype:  YPO0387
  Hpy:  HP0452_2
  jHp:  jhp0164
  Cje:  Cj0139
_______

[R] COG1402 Uncharacterized protein, putative amidase
  Hbs:  VNG0124C VNG1769Cm
  Mth:  MTH651
  Mja:  MJ0116
  Mka:  MK0183
  Pya:  PAE2983
  Sso:  SSO2832
  Ape:  APE0954
  Tma:  TM0413
  Mtu:  Rv0695
  MtC:  MT0722
  Lin:  lin2796
  Bha:  BH0226
  Syn:  sll0596 slr0596
  Nos:  all4283 alr1374
  Atu:  AGl731
  Sme:  SMc02977
  Bme:  BMEII0309
  Mlo:  mlr1298 mlr3472 mlr8484
  Ccr:  CC3578
_______

[V] COG1403 Restriction endonuclease
  Hbs:  VNG6364H
  Dra:  DR1312 DR2409 DR2483 DRA0057_3 DRA0131_2
  Cac:  CAC1897
  Mtu:  Rv2469c
  MtC:  MT2545
  Mle:  ML1254
  Lla:  L39564 L51784 L63293
  Spy:  SPy1468
  Sau:  SA1779
  Lin:  lin2581
  Bsu:  BS_yisB
  Syn:  sll1193 sll2007 slr0393 slr2080
  Nos:  all2419 all2457 all5206_2 all7277 all7624 all8564 alr0856
        alr3486 alr7075 alr7241_2 alr7242_2 alr7308_2 alr8560_2 asl0629
        asr1453
  Eco:  mcrA
  EcZ:  Z1356 Z1800 Z1852 Z6047
  Ecs:  ECs1540 ECs1595 ECs1789 ECs1968 ECs2254
  Vch:  VCA0307
  Xfa:  XF1912
  Rso:  RSc1680 RSp1603
  Atu:  AGl2586
  Sme:  SMc00737
  Bme:  BMEI0383
  Mlo:  mll1793 mll3477 mll7975
  Ccr:  CC1868 CC2200
_______

[O] COG1404 Subtilisin-like serine proteases
  Afu:  AF1652_1 AF1653
  Hbs:  VNG1951G VNG2573G
  Mac:  MA2017 MA2309_1 MA4234
  Pya:  PAE0712 PAE1982 PAE1983
  Ape:  APE0263 APE0607 APE1213
  Sce:  YCR045c YEL060c YNL238w_1 YOR003w
  Spo:  SPAC1006.01 SPAC22E12.09c_1 SPAC4A8.04 SPAP8A3.12c
  Ecu:  ECU01g1130 ECU03g1180
  Aae:  aq_1950 aq_aa18
  Fnu:  FN1426_1 FN1950_1 FN2100
  Dra:  DR0812 DR1459 DR1536 DR1937 DR2322 DR2325 DRA0064
        DRA0283 DRA0341 DRB0069
  Cac:  CAC0742_2 CAC3245 CAC3549
  Cgl:  Cgl0559 Cgl1166_2
  Mtu:  Rv0291 Rv1796 Rv3449 Rv3883c Rv3886c
  MtC:  MT0304 MT1845 MT3555 MT3998
  Mle:  ML0041 ML1538 ML2528
  Spy:  SPy0416 SPy2010
  Spn:  SP0641
  Bsu:  BS_aprE BS_aprX BS_bpr_1 BS_epr BS_ispA BS_vpr BS_wprA
  Bha:  BH0684 BH0696 BH0831 BH0855 BH1491 BH1930 BH2080
        BH2183 BH3763
  Syn:  slr0459 slr0535
  Nos:  all0364_1 all0781 alr0996 alr1381_1 alr1615_2 alr3543 alr4870_1
  Sty:  STM3595_2
  Vch:  VC0157
  Pae:  PA1242 PA3535_1
  Xfa:  XF0267_1 XF1026_1 XF1851_2
  Nme:  NMB1969_1
  NmA:  NMA0478_1
  Rso:  RSc0131_2 RSc2653 RSc2654 RSc3101 RSp0603
  Cje:  Cj1365c_1
  Atu:  AGl612_2
  Sme:  SMa0142 SMa1903
  Mlo:  mll5116 mlr2725
  Uur:  UU441
  Mpu:  MYPU_6550
_______

[K] COG1405 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB
  Afu:  AF1299
  Hbs:  VNG0254G VNG0315G VNG0734G VNG0869G VNG1390H VNG2184G VNG6351G
        VNG6389G
  Mac:  MA0610
  Mth:  MTH885
  Mja:  MJ0782_1 MJ0782_3
  Mka:  MK0619 MK0858
  Tac:  Ta0940 Ta0945 Ta1020
  Tvo:  TVN0570 TVN1083 TVN1089
  Pho:  PH0864 PH1482
  Pab:  PAB1912
  Pya:  PAE1645 PAE2120 PAE3329
  Sso:  SSO0280 SSO0446 SSO0946
  Ape:  APE0508 APE0787 APE2443
  Sce:  YGR246c YPR086w
  Spo:  SPAC16E8.16 SPBC13E7.10c
  Ecu:  ECU05g0500 ECU06g1100i
_______

[N] COG1406 Predicted inhibitor of MCP methylation, homolog of CheC
  Tma:  TM1618
  Cac:  CAC0586
  Bha:  BH1088
  Vch:  VC0377
  Tpa:  TP0365
  Bbu:  BB0671
_______

[R] COG1407 Predicted ICC-like phosphoesterases
  Afu:  AF1155 AF1193
  Hbs:  VNG0543H VNG1252G
  Mac:  MA0757
  Mth:  MTH1803
  Mja:  MJ0037
  Mka:  MK1388
  Tac:  Ta0537m
  Tvo:  TVN0591
  Pho:  PH0641 PH1310
  Pab:  PAB0562 PAB0926
  Pya:  PAE2243
  Sso:  SSO0952
  Ape:  APE1861
  Atu:  AGc876
  Sme:  SMc02236
  Bme:  BMEII0463
  Mlo:  mlr5611
  Ccr:  CC2041
_______

[R] COG1408 Predicted phosphohydrolases
  Mac:  MA3647
  Mth:  MTH1179
  Pya:  PAE3211
  Aae:  aq_1054
  Dra:  DR2345
  Cac:  CAC2775 CAC3027
  Cgl:  Cgl0277
  Mtu:  Rv3683
  MtC:  MT3785
  Mle:  ML2309
  Lla:  L42411 L56236
  Lin:  lin0757 lin2211
  Bsu:  BS_ykoQ BS_ykuE BS_ypbG
  Bha:  BH1618
  Nos:  all0250 all0251
  Eco:  yaeI
  Rso:  RSc0007
  Hpy:  HP1044
  jHp:  jhp0380
  Cje:  Cj0846
  Sme:  SMc03964
  Mlo:  mll3894
  Ctr:  CT461
  Cpn:  CPn0578
_______

[R] COG1409 Predicted phosphohydrolases
  Afu:  AF2430_1
  Mac:  MA1686 MA4564
  Mth:  MTH1722 MTH178
  Mka:  MK0292 MK1431
  Pho:  PH0104
  Pab:  PAB0011 PAB2278
  Pya:  PAE0055_1
  Ape:  APE0966
  Sce:  YLR361c YOR137c
  Spo:  SPCC1020.05
  Aae:  aq_684
  Cac:  CAC0205 CAC1961 CAC2806
  Cgl:  Cgl1935 Cgl2853 Cgl2858 Cgl3004
  Mtu:  Rv0805 Rv2577 Rv2795c
  MtC:  MT0825 MT2654 MT2864
  Mle:  ML1548 ML2210
  Lla:  L197075
  Sau:  SA2225
  Lin:  lin2791
  Bsu:  BS_yotB BS_yvnB
  Syn:  sll0222 slr1895
  Nos:  all1686 all2852 alr1903_3 alr5338
  Eco:  icc
  EcZ:  Zicc
  Ecs:  ECs3920
  Ype:  YPO0666
  Sty:  STM3183
  Vch:  VC2433
  Pae:  PA4969
  Hin:  HI0399
  Pmu:  PM1019
  Rso:  RSc1795 RSp0534 RSp1652
  Atu:  AGc1602 AGc4081 AGc4113 AGc691 AGl1025 AGl909_1
  Sme:  SMb20152 SMc02179 SMc02712
  Bme:  BMEI0452 BMEII0111
  Mlo:  mll1717 mll2796 mll3631 mll8078 mll9148 mll9676
  Ccr:  CC1158 CC3556
  Ctr:  CT754
  Cpn:  CPn0897
_______

[E] COG1410 Methionine synthase I, cobalamin-binding domain
  Tma:  TM0268_2
  Dra:  DR0966_2
  Cac:  CAC0578_2
  Cgl:  Cgl1471_2
  Mtu:  Rv2124c_2
  MtC:  MT2183_2
  Mle:  ML1307_2
  Bha:  BH1630_2
  Syn:  slr0212_2
  Nos:  alr0308_2
  Eco:  metH_2
  EcZ:  ZmetH_2
  Ecs:  ECs4937_2
  Ype:  YPO3722_2
  Sty:  STM4188_2
  Vch:  VC0390_2
  Pae:  PA1843_2
  Hin:  HI1042
  Xfa:  XF1522_2
  Rso:  RSc0294
  Atu:  AGc3907_2
  Sme:  SMc03112_2 SMc04342
  Bme:  BMEI1759_2
  Mlo:  mll6206 mlr1243 msl6205
  Ccr:  CC2137
_______

[R] COG1411 Uncharacterized protein related to proFAR isomerase (HisA)
  Afu:  AF0713
  Mac:  MA4435
  Mth:  MTH669
  Mja:  MJ0703
  Mka:  MK0492_1
_______

[R] COG1412 Uncharacterized proteins of PilT N-term./Vapc superfamily
  Afu:  AF0591
  Hbs:  VNG2054H
  Mac:  MA3691
  Mth:  MTH262
  Mja:  MJ1320
  Mka:  MK1448
  Tac:  Ta0763
  Tvo:  TVN0851
  Pho:  PH1710
  Pab:  PAB2042
  Pya:  PAE3561
  Sso:  SSO0414
  Ape:  APE2365
  Sce:  YDR339c YOR004w
  Spo:  SPBC32H8.04c SPCC18.12c
  Ecu:  ECU04g0590 ECU05g0560
_______

[C] COG1413 FOG: HEAT repeat
  Hbs:  VNG0782H VNG0963G
  Mac:  MA1839_2 MA2540 MA2807 MA3275 MA3560_1 MA3599 MA4317
        MA4596
  Mth:  MTH1378 MTH1715 MTH1806 MTH187
  Sce:  YJR070c
  Spo:  SPAC30C2.02
  Ecu:  ECU06g1490
  Sau:  SA1262_2
  Bsu:  BS_ypgR_2
  Bha:  BH1718_2 BH2232
  Syn:  sll0068_2 sll1051 sll1663 slr1098 slr1687 slr1878
  Nos:  all0605 all0993_1 all2129_2 all3465_2 all3549 all3892_2 alr0526
        alr0527 alr0532 alr0533 alr0616 alr1903_2 alr2986 alr3814
        alr4537 alr8532
  Eco:  yibA
  EcZ:  ZyibA
  Pae:  PA2293
  Mlo:  mlr6693 mlr9194
  Ctr:  CT350 CT384
  Cpn:  CPn0021 CPn0487
  Tpa:  TP0882
  Bbu:  BB0811
_______

[K] COG1414 Transcriptional regulator
  Hbs:  VNG6318G
  Aae:  aq_1510 aq_764
  Tma:  TM0065
  Dra:  DR1156 DR1217 DRA0152
  Cgl:  Cgl0540 Cgl1283 Cgl2340 Cgl2587 Cgl2966 Cgl2999
  Mtu:  Rv1719 Rv1773c Rv2989
  MtC:  MT1758 MT1823 MT3067
  Bsu:  BS_ycsO
  Bha:  BH1819 BH2137 BH3725
  Eco:  iclR kdgR mhpR yagI ybbU yfaX yiaJ
        yjhI
  EcZ:  Z2874 Z3506 ZiclR ZmhpR ZybbU
  Ecs:  ECs0401 ECs0567 ECs2537 ECs3136 ECs4936
  Ype:  YPO1714
  Sty:  STM0516 STM1842 STM2292 STM3098 STM3533 STM3667 STM4187
  Vch:  VCA0029
  Pae:  PA0155 PA0236 PA1015 PA1630 PA2010 PA3174 PA3508
        PA4157 PA4341
  Hin:  HI1032
  Pmu:  PM1257
  Rso:  RSc0300 RSc0302 RSc0757 RSc1610 RSc2255 RSc3411 RSp0704
  Cje:  Cj0480c
  Atu:  AGc1276 AGl119 AGl3107 AGl554 AGl644 AGl810 AGpA196
        AGpA685_1
  Sme:  SMa0717_1 SMb20387 SMb20586 SMb20682 SMb21102 SMb21140 SMc00263
        SMc00879
  Bme:  BMEI0387 BMEI1717 BMEII0127 BMEII0219 BMEII0299 BMEII0642 BMEII1022
  Mlo:  mll0250 mll3795 mll9009 mlr4184 mlr7155 mlr8761
  Ccr:  CC1811
_______

[S] COG1415 Uncharacterized conserved protein
  Afu:  AF1496
  Mth:  MTH448 MTH449
  Mka:  MK0401
  Tac:  Ta1095
  Tvo:  TVN0480
  Pho:  PH0745
  Pab:  PAB1513
  Pya:  PAE0766
  Sso:  SSO2459
  Ape:  APE1824
  Sme:  SMb21455
  Mlo:  mlr6856
_______

[S] COG1416 Uncharacterized conserved protein
  Afu:  AF0913
  Hbs:  VNG1790H
  Mth:  MTH1491
  Tac:  Ta1009
  Tvo:  TVN0240 TVN0580
  Aae:  aq_1119
  Dra:  DR0054
  Rso:  RSc3257
  Mlo:  mlr2777
_______

[S] COG1417 Uncharacterized conserved protein
  Afu:  AF0079 AF0119 AF0121m AF0178 AF0664 AF1527
  Mth:  MTH952
  Mja:  MJ0614
  Mka:  MK1675
_______

[R] COG1418 Predicted HD superfamily hydrolase
  Afu:  AF0994 AF1224
  Hbs:  VNG0534C
  Mac:  MA1277 MA4682
  Mth:  MTH1668
  Mja:  MJ0778
  Mka:  MK0254 MK0494 MK1470
  Tac:  Ta0931_2
  Tvo:  TVN1071_2
  Pho:  PH1934
  Pab:  PAB1118
  Aae:  aq_1732
  Tma:  TM1857
  Fnu:  FN1913
  Dra:  DR2462
  Cac:  CAC1667 CAC1816 CAC2925
  Lla:  L1008 L150593 L179243
  Spy:  SPy0357 SPy1633
  Spn:  SP1739
  Sau:  SA1129 SA1892
  Lin:  lin1436 lin1889
  Bsu:  BS_ymdA BS_ypgQ BS_yueE
  Bha:  BH2378 BH2835 BH2866
  Eco:  yedJ
  EcZ:  ZyedJ
  Ecs:  ECs2700
  Sty:  STM1993
  Hpy:  HP0760
  jHp:  jhp0697
  Cje:  Cj1209
  Atu:  AGc1925
  Sme:  SMc02632
  Tpa:  TP1018
  Bbu:  BB0504
  Uur:  UU085
  Mpn:  MPN269
  Mge:  MG130
_______

[N] COG1419 Flagellar GTP-binding protein
  Aae:  aq_1214
  Tma:  TM0907
  Cac:  CAC2146
  Lin:  lin0689
  Bsu:  BS_flhF
  Bha:  BH2437
  Vch:  VC2068
  Pae:  PA1453
  Rso:  RSp1392
  Hpy:  HP1035
  jHp:  jhp0389
  Cje:  Cj0064c
  Tpa:  TP0713
  Bbu:  BB0270
_______

[K] COG1420 Transcriptional regulator of heat shock gene
  Tma:  TM0851
  Fnu:  FN0113
  Cac:  CAC1280
  Cgl:  Cgl2239
  Mtu:  Rv2374c
  MtC:  MT2443
  Mle:  ML0624
  Lla:  L0212
  Spy:  SPy1763
  Spn:  SP0515
  Sau:  SA1411
  Lin:  lin1512
  Bsu:  BS_hrcA
  Bha:  BH1344
  Syn:  sll1670
  Nos:  alr4044
  Xfa:  XF2342
  Rso:  RSc2649
  Hpy:  HP0111
  jHp:  jhp0103
  Cje:  Cj0757
  Atu:  AGc572
  Sme:  SMc01143
  Bme:  BMEI1776
  Mlo:  mll4621
  Ccr:  CC0153
  Ctr:  CT394
  Cpn:  CPn0501
  Uur:  UU421
  Mpu:  MYPU_1420
  Mpn:  MPN124
  Mge:  MG205
_______

[L] COG1421 Uncharacterized protein predicted to be involved in DNA repair
  Mth:  MTH1081
  Mja:  MJ1670
  Mka:  MK1315
  Tvo:  TVN0111
  Pho:  PH0164
  Tma:  TM1810
_______

[S] COG1422 Predicted membrane protein
  Afu:  AF1901
  Hbs:  VNG0834C VNG1726G
  Mac:  MA1103
  Mth:  MTH28
  Mja:  MJ0480
  Mka:  MK0024
  Tac:  Ta1246
  Tvo:  TVN0350
  Pho:  PH1752
  Pab:  PAB2141
_______

[L] COG1423 ATP-dependent DNA ligase, homolog of eukaryotic ligase III
  Afu:  AF0849
  Mac:  MA4653
  Mth:  MTH1221
  Mja:  MJ0414
  Mka:  MK0528
  Pho:  PH0498
  Pab:  PAB1020
  Ape:  APE1567
  Aae:  aq_1106
_______

[H] COG1424 Pimeloyl-CoA synthetase
  Mja:  MJ1297
  Aae:  aq_1659
  Sau:  SA2211
  Bsu:  BS_bioW
_______

[S] COG1426 Uncharacterized protein conserved in bacteria
  Tma:  TM1864
  Lla:  L30285
  Spy:  SPy2197
  Spn:  SP2223
  Sau:  SA1125
  Lin:  lin1432
  Bsu:  BS_ymfM
  Bha:  BH2388
  Nos:  all3872 alr1052
  Eco:  yfgA
  EcZ:  ZyfgA
  Ecs:  ECs3378
  Ype:  YPO2880
  Sty:  STM2524
  Vch:  VC0758
  Pae:  PA3804
  Hin:  HI0367
  Pmu:  PM2009
  Xfa:  XF0461
  Rso:  RSc1214
  Rpr:  RP757
  Rco:  RC1173
  Ctr:  CT009
  Cpn:  CPn1069
  Tpa:  TP0334
  Bbu:  BB0345
_______

[R] COG1427 Predicted periplasmic solute-binding protein
  Afu:  AF0389
  Tac:  Ta0218
  Tvo:  TVN1376
  Pya:  PAE1166
  Ape:  APE0254
  Aae:  aq_1070
  Dra:  DR0370
  Bha:  BH1652
  Hpy:  HP0778
  jHp:  jhp0715
  Cje:  Cj1285c
  Ctr:  CT427
  Cpn:  CPn0514
_______

[F] COG1428 Deoxynucleoside kinases
  Dra:  DR0298 DR0299
  Lla:  L169971 L93481
  Spy:  SPy0121
  Sau:  SA0514 SA0515
  Lin:  lin1817
  Bsu:  BS_yaaF BS_yaaG
  Rso:  RSc2629
  Bbu:  BB0239
  Uur:  UU086
  Mpu:  MYPU_5520
  Mpn:  MPN386
  Mge:  MG268
_______

[H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases
  Hbs:  VNG1566G
  Mac:  MA0346 MA0348 MA0383 MA0384 MA0385 MA0386 MA0872
        MA0882 MA4295 MA4424 MA4643
  Mth:  MTH1363 MTH237 MTH317 MTH318 MTH351 MTH456 MTH514
        MTH515 MTH673 MTH714_2 MTH928
  Mja:  MJ0908 MJ1441
  Mka:  MK0134 MK0509 MK0663 MK0664 MK1041 MK1351 MK1405
        MK1534
  Mtu:  Rv2062c
  MtC:  MT2121
  Syn:  sll1890 slr1055 slr1211
  Nos:  all4365 alr1689 alr4733
  Pae:  PA1923 PA2944
  Rso:  RSp0626
  Atu:  AGc5085
  Sme:  SMc04303
  Bme:  BMEI0695
  Mlo:  mlr1377
_______

[S] COG1430 Uncharacterized conserved protein
  Hbs:  VNG0121H
  Mth:  MTH1377
  Mja:  MJ1496
  Mka:  MK1506
  Pho:  PH1112
  Pab:  PAB0743
  Pya:  PAE2955
  Tma:  TM1668
  Syn:  slr1236
  Nos:  all4749 alr7201 alr7529
  Xfa:  XF1495
  Rso:  RSc2494
  Atu:  AGc3316
  Sme:  SMc00288
  Bme:  BMEI0732
  Mlo:  mlr0169
  Ccr:  CC1388
  Tpa:  TP0087
  Bbu:  BB0663
_______

[J] COG1431 Uncharacterized protein containing piwi/argonaute domain
  Afu:  AF1318
  Mja:  MJ1321
  Mka:  MK1311
  Aae:  aq_1447
_______

[S] COG1432 Uncharacterized conserved protein
  Afu:  AF1062
  Hbs:  VNG0419C VNG1608C
  Mac:  MA3857
  Mth:  MTH1064 MTH1913
  Mja:  MJ0482
  Mka:  MK0763
  Pho:  PH0073 PH0074
  Pab:  PAB0042 PAB0043
  Aae:  aq_200 aq_430
  Dra:  DR1578 DR1997m
  Cgl:  Cgl2883_1
  Syn:  slr0650 slr0755 slr1870
  Nos:  all0232 all4729 alr4839
  Vch:  VC1811
  Pae:  PA3951
  NmA:  NMA2192
  Hpy:  HP0878 HP0879 HP1145 HP1146 HP1334
  jHp:  jhp0812 jhp1073
  Cje:  Cj0189c
  Atu:  AGc1890
  Sme:  SMa1264 SMc02407
  Bme:  BMEI1298
  Mlo:  mll7752
  Ccr:  CC1550
  Tpa:  TP0894
_______

[S] COG1433 Uncharacterized conserved protein
  Afu:  AF0668 AF2377 AF2378 AF2388_2
  Mac:  MA2085_2 MA4243 MA4244
  Mth:  MTH1172_2 MTH1175 MTH1177
  Mja:  MJ0327 MJ0580
  Mka:  MK1241
  Tac:  Ta1041m Ta1370
  Tvo:  TVN0554
  Pho:  PH0822 PH0880 PH1227 PH1383
  Pab:  PAB0517 PAB1692
  Pya:  PAE1034 PAE1037
  Tma:  TM1290 TM1816
  Cac:  CAC3167
  Vch:  VC1323
_______

[S] COG1434 Uncharacterized conserved protein
  Aae:  aq_1986
  Tma:  TM1674
  Dra:  DR0210
  Cac:  CAC0352 CAC0441
  Cgl:  Cgl0695 Cgl2222 Cgl2946
  Lla:  L169301 L17153 L171552
  Sau:  SA2148
  Lin:  lin1003 lin2536
  Syn:  sll1606
  Nos:  all0244 all1816 all7174 alr1740 alr2467 alr5243
  Eco:  ycbC ydcF
  EcZ:  ZycbC ZydcF
  Ecs:  ECs1003 ECs2020
  Ype:  YPO2511_2
  Sty:  STM0098 STM0990 STM1640
  Vch:  VC1698 VC1718 VCA0595
  Pae:  PA2066 PA3985
  Hin:  HI1701
  Pmu:  PM0506
  Xfa:  XF2101
  Nme:  NMB0004
  NmA:  NMA0251
  Rso:  RSc0146 RSc1968 RSc2460
  Atu:  AGl144 AGl2436
  Sme:  SMc00331 SMc00715
  Bme:  BMEI0074 BMEI0810 BMEI1842 BMEI2016 BMEII0841
  Mlo:  mll0674 mlr3524
  Ccr:  CC2218
  Rpr:  RP875
  Rco:  RC1356
_______

[F] COG1435 Thymidine kinase
  Hbs:  VNG1515G
  Tac:  Ta1214
  Pya:  PAE2453
  Ecu:  ECU01g0740i
  Tma:  TM0401
  Dra:  DR1984
  Cac:  CAC2887
  Lla:  L184871
  Spy:  SPy1140
  Spn:  SP1018
  Sau:  SA1921
  Lin:  lin2688
  Bsu:  BS_tdk
  Bha:  BH3779
  Eco:  tdk
  EcZ:  Ztdk
  Ecs:  ECs1740
  Ype:  YPO2176
  Sty:  STM1750
  Vch:  VC1167
  Hin:  HI0529
  Pmu:  PM1236
  Atu:  AGc4147
  Sme:  SMc02736
  Mlo:  mlr2747
  Bbu:  BB0791
  Uur:  UU594
  Mpu:  MYPU_1450
  Mpn:  MPN044
  Mge:  MG034
_______

[C] COG1436 Archaeal/vacuolar-type H+-ATPase subunit F
  Afu:  AF1165
  Hbs:  VNG2140G
  Mac:  MA4157
  Mth:  MTH956
  Mja:  MJ0218
  Mka:  MK1016
  Tac:  Ta0003
  Tvo:  TVN0051
  Pho:  PH1976
  Pab:  PAB1184
  Pya:  PAE0661
  Sso:  SSO0560
  Ape:  APE0410
  Sce:  YGR020c
  Spo:  SPBC3B9.18c
  Ecu:  ECU03g0305
  Fnu:  FN1737
  Dra:  DR0699
  Spn:  SP1318
  Tpa:  TP0531
_______

[F] COG1437 Adenylate cyclase, class 2 (thermophilic)
  Afu:  AF1988
  Hbs:  VNG1296C
  Mac:  MA4044
  Mth:  MTH1629
  Mja:  MJ0240
  Mka:  MK0871
  Pho:  PH1012 PH1819
  Pab:  PAB0653 PAB2098
  Pya:  PAE0832
  Sso:  SSO0253
  Ape:  APE1761
  Cac:  CAC0650
  Ype:  YPO1178
  Rso:  RSc1389
  Bbu:  BB0723
_______

[K] COG1438 Arginine repressor
  Tma:  TM0371
  Dra:  DR0742
  Cac:  CAC2074
  Cgl:  Cgl1366
  Mtu:  Rv1657
  MtC:  MT1695
  Mle:  ML1411
  Lla:  L0110 L82250
  Spy:  SPy1496 SPy1549 SPy2150
  Spn:  SP0893 SP1203 SP2077
  Sau:  SA1351 SA2429
  Lin:  lin1404
  Bsu:  BS_ahrC
  Bha:  BH2777
  Eco:  argR
  EcZ:  ZargR
  Ecs:  ECs4110
  Ype:  YPO3517
  Sty:  STM3360 STM4463
  Vch:  VC0431
  Hin:  HI1209
  Pmu:  PM0549
  Cpn:  CPn0193
_______

[R] COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module
  Afu:  AF0385
  Hbs:  VNG1994C
  Mac:  MA0920
  Mth:  MTH1862
  Mja:  MJ1474
  Mka:  MK0744
  Tac:  Ta0041
  Tvo:  TVN0120
  Pho:  PH0709
  Pab:  PAB0882
  Pya:  PAE0626
  Sso:  SSO2218
  Ape:  APE1102
  Sce:  YOR056c
  Spo:  SPAC1486.09
  Ecu:  ECU09g0370
_______

[G] COG1440 Phosphotransferase system cellobiose-specific component IIB
  Cac:  CAC0384
  Lla:  L18872
  Spy:  SPy1324 SPy2051
  Spn:  SP0249 SP0305 SP2023
  Lin:  lin0327 lin0393 lin0873 lin0914 lin1080 lin1831 lin2458
        lin2472 lin2831 lin2905
  Bsu:  BS_licB BS_ydhM
  Bha:  BH0909 BH3921
  Eco:  celA
  EcZ:  ZcelA
  Ecs:  ECs2444
  Ype:  YPO2678
  Sty:  STM1312
  Vch:  VC1281
  Bbu:  BBB06
_______

[H] COG1441 O-succinylbenzoate synthase
  Eco:  menC
  EcZ:  ZmenC
  Ecs:  ECs3149
  Ype:  YPO2524
  Sty:  STM2306
  Vch:  VC1972
  Hin:  HI0969
  Pmu:  PM1094
_______

[M] COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
  Spn:  SP1765 SP1766 SP1767 SP1770 SP1771_2
  Bsu:  BS_gspA
  Eco:  rfaI rfaJ
  EcZ:  ZwaaI ZwaaJ
  Ecs:  ECs4502 ECs4504
  Sty:  STM3717 STM3718
  Hin:  HI0258
  Pmu:  PM1139
  Hpy:  HP0159 HP1105 HP1416 HP1578
  jHp:  jhp0147 jhp0194 jhp0820 jhp1031 jhp1032 jhp1311
  Sme:  SMb21068
  Rpr:  RP476
  Rco:  RC0720 RC0721
_______

[I] COG1443 Isopentenyldiphosphate isomerase
  Hbs:  VNG1818G
  Sce:  YPL117c
  Spo:  SPBC106.15
  Ecu:  ECU02g0230
  Cgl:  Cgl2252
  Mtu:  Rv1745c
  MtC:  MT1787
  Eco:  idi
  EcZ:  Z4227
  Ecs:  ECs3761
  Sty:  STM3039
_______

[R] COG1444 Predicted P-loop ATPase fused to an acetyltransferase
  Afu:  AF1522
  Hbs:  VNG1156G
  Mka:  MK0146
  Pho:  PH0788
  Pab:  PAB2428
  Pya:  PAE1371
  Sso:  SSO0391 SSO3214
  Ape:  APE1543 APE2392
  Sce:  YNL132w
  Spo:  SPAC20G8.09c
  Ecu:  ECU10g0280
  Eco:  ypfI
  EcZ:  ZypfI
  Ecs:  ECs3336
  Ype:  YPO3056
  Sty:  STM2485
  Vch:  VCA1112
  Hin:  HI1254 HI1255 HI1256
  Pmu:  PM1043
_______

[G] COG1445 Phosphotransferase system fructose-specific component IIB
  Fnu:  FN1441_2
  Dra:  DRB0073_1
  Cac:  CAC0234_1
  Cgl:  Cgl1891_2
  Lla:  L185031_2
  Spy:  SPy0855_2
  Spn:  SP0877_2 SP1618
  Sau:  SA0655_2 SA2434_1
  Lin:  lin0377_1 lin0422 lin2241 lin2429_2
  Bsu:  BS_fruA_2 BS_yjdD_1
  Bha:  BH0828_2
  Eco:  fruA_2 frvB_1 frwB frwD hrsA_2 ypdH
  EcZ:  Z3653 ZfruA_2 ZfrvB_1 ZfrwB ZfrwD
  Ecs:  ECs3059_2 ECs3267 ECs4825_1 ECs4879 ECs4882
  Ype:  YPO0402 YPO0403 YPO1300_2
  Sty:  STM2204_2 STM3255_1 STM3858_1 STM4113 STM4116
  Vch:  VC1821_2 VC1822_3 VC1823 VC1826_2 VCA0516_1
  Pae:  PA3560_1
  Hin:  HI0446_2
  Pmu:  PM1795_2
  Rso:  RSc2863_1
  Bbu:  BB0408_2 BB0629_2
  Mpu:  MYPU_1290_2
  Mpn:  MPN078_2
  Mge:  MG062_2
_______

[E] COG1446 Asparaginase
  Hbs:  VNG1872C
  Tac:  Ta0338
  Tvo:  TVN0432
  Pho:  PH0232
  Pab:  PAB0145
  Pya:  PAE3083
  Sso:  SSO2350
  Spo:  SPAC823.09c
  Syn:  sll0422
  Nos:  all3922
  Eco:  ybiK
  EcZ:  Z1051m
  Ecs:  ECs0906 ECs0907
  Sty:  STM0847
  Vch:  VC2603
  Rso:  RSc1378
  Atu:  AGl3520
  Ccr:  CC0097 CC0576 CC2359
_______

[G] COG1447 Phosphotransferase system cellobiose-specific component IIA
  Cac:  CAC0383 CAC2965
  Lla:  L19292
  Spy:  SPy1323 SPy1918 SPy2052
  Spn:  SP0248 SP0308 SP0476 SP1186 SP2024
  Sau:  SA1993
  Lin:  lin0329 lin0872 lin0917 lin1830 lin2360 lin2457 lin2833
        lin2908
  Bsu:  BS_licA BS_ydhN
  Bha:  BH0910 BH3920
  Eco:  celC
  EcZ:  ZcelC
  Ecs:  ECs2442
  Ype:  YPO2680
  Sty:  STM1314
  Vch:  VC1283
  Bbu:  BBB05
_______

[E] COG1448 Aspartate/tyrosine/aromatic aminotransferase
  Sce:  YKL106w YLR027c
  Spo:  SPAC10F6.13c SPBC725.01
  Fnu:  FN0334
  Eco:  aspC tyrB
  EcZ:  ZaspC ZtyrB
  Ecs:  ECs1011 ECs5036
  Ype:  YPO0322 YPO1410
  Sty:  STM0998 STM4248
  Vch:  VC1293 VCA0513
  Pae:  PA0870 PA3139
  Hin:  HI1617
  Pmu:  PM0621
  Xfa:  XF0036
  Nme:  NMB0540 NMB1678
  NmA:  NMA0719 NMA1937
  Rso:  RSc1010
  Sme:  SMc00387
  Mlo:  mll0405
  Ctr:  CT637
  Cpn:  CPn0740
_______

[G] COG1449 Alpha-amylase/alpha-mannosidase
  Mac:  MA4052 MA4053
  Mja:  MJ1611
  Tac:  Ta0129_1 Ta0339m
  Tvo:  TVN0431
  Pho:  PH0193
  Pab:  PAB0118 PAB0122_1
  Pya:  PAE1048 PAE3428 PAE3454_1
  Sso:  SSO0988 SSO1172
  Aae:  aq_720
  Syn:  slr0337
  Nos:  alr0627 alr1310
  Tpa:  TP0147
_______

[NU] COG1450 Type II secretory pathway, component PulD
  Aae:  aq_1288
  Fnu:  FN2086
  Eco:  gspD
  EcZ:  Z4197 ZescC
  Ecs:  ECs3733 ECs4575
  Ype:  YPCD1.52 YPO0257 YPO0816 YPO2280
  Sty:  STM1394 STM2898
  Vch:  VC0402
  Pae:  PA0685 PA1382 PA1716 PA1868 PA3105
  Xfa:  XF1527
  Rso:  RSc3114 RSp0874
  Cje:  Cj1474c
  Mlo:  mll6338 mll6829
  Ccr:  CC0173
  Ctr:  CT572 CT674
  Cpn:  CPn0702 CPn0815
_______

[R] COG1451 Predicted metal-dependent hydrolase
  Afu:  AF1707
  Hbs:  VNG0110C
  Mac:  MA2993 MA3501
  Mth:  MTH939
  Mja:  MJ0123 MJ1213
  Pho:  PH0712
  Pab:  PAB1496 PAB3079
  Aae:  aq_aa15
  Fnu:  FN0946
  Dra:  DR2490
  Cac:  CAC0328
  Cgl:  Cgl0757
  Eco:  ygjP
  EcZ:  ZygjP
  Ecs:  ECs3967
  Ype:  YPO0586
  Sty:  STM3221
  Vch:  VC1615
  Pae:  PA0560
  Xfa:  XF0294 XF0567
  Nme:  NMB0226 NMB2035
  NmA:  NMA0032 NMA0403
  Rso:  RSc0521
  Hpy:  HP0806 HP1401
  jHp:  jhp0742 jhp1425
  Cje:  Cj0620
  Atu:  AGc25
  Sme:  SMc02768
  Bme:  BMEI2015 BMEII0448
  Mlo:  mlr5068
  Ccr:  CC0251
  Rco:  RC0404
  Uur:  UU323
  Mpu:  MYPU_3260
_______

[M] COG1452 Organic solvent tolerance protein OstA
  Aae:  aq_967
  Eco:  imp
  EcZ:  Zimp
  Ecs:  ECs0059
  Ype:  YPO0495
  Sty:  STM0093
  Vch:  VC0446
  Pae:  PA0595
  Hin:  HI0730
  Pmu:  PM1600
  Xfa:  XF0837
  Nme:  NMB0280
  NmA:  NMA2207
  Rso:  RSc0515
  Hpy:  HP1215 HP1216
  jHp:  jhp1138
  Cje:  Cj1252
  Atu:  AGc2049
  Sme:  SMc00582
  Bme:  BMEI1264
  Mlo:  mll7864
  Ccr:  CC1689
  Rpr:  RP674
  Rco:  RC1024
  Tpa:  TP0515
  Bbu:  BB0838
_______

[R] COG1453 Predicted oxidoreductases of the aldo/keto reductase family
  Mac:  MA0404 MA0422 MA0427 MA2058 MA2291 MA2292 MA2756
        MA3683
  Mth:  MTH907
  Tma:  TM1183
  Cac:  CAC0765 CAC0767
  Syn:  sll0867 slr1520
  Nos:  alr2759 alr5260
_______

[C] COG1454 Alcohol dehydrogenase, class IV
  Afu:  AF0024 AF0339 AF2019
  Hbs:  VNG2171G
  Mac:  MA2630
  Mth:  MTH984
  Tac:  Ta0832m
  Tvo:  TVN0396 TVN1284
  Pho:  PH0743
  Pab:  PAB1511
  Sso:  SSO2490
  Ape:  APE1963
  Sce:  YGL256w
  Spo:  SPAC5H10.06c
  Aae:  aq_1145
  Tma:  TM0111 TM0920
  Fnu:  FN0092
  Cac:  CAC1574 CAP0035_2 CAP0059 CAP0162_2
  Cgl:  Cgl1133 Cgl2997
  Lla:  L13145_2
  Spn:  SP2026_2 SP2157
  Sau:  SA0143_2
  Lin:  lin1130 lin1135 lin1675_2
  Bsu:  BS_gbsB
  Bha:  BH0534
  Eco:  adhE_2 eutG fucO yiaY
  EcZ:  ZadhE_2 ZeutG ZfucO ZyiaY
  Ecs:  ECs1741_2 ECs3315 ECs3659 ECs4466
  Ype:  YPO0327 YPO2180_2
  Sty:  STM1749_2 STM2052 STM2461 STM2973 STM4044
  Vch:  VC0250 VC1147 VC2033_2
  Pae:  PA1146 PA1991 PA5186
  Pmu:  PM1453_2
  Rso:  RSc1771 RSp0986
  Atu:  AGc3879 AGc4594 AGl1250 AGpA105 AGpA199
  Sme:  SMa0263 SMb20147 SMc01582
  Bme:  BMEII0553
  Mlo:  mll3070 mll5720
_______

[G] COG1455 Phosphotransferase system cellobiose-specific component IIC
  Cac:  CAC0386 CAC2964
  Lla:  L177520 L20847 L31294
  Spy:  SPy1917 SPy2050
  Spn:  SP0250 SP0310 SP0474 SP0478 SP1185 SP2022
  Sau:  SA1992
  Lin:  lin0033 lin0326 lin0392 lin0874 lin0900 lin0915 lin2459
        lin2832 lin2856 lin2906
  Bsu:  BS_licC BS_ydhO BS_ywbA
  Bha:  BH0911 BH3919
  Eco:  celB
  EcZ:  ZcelB
  Ecs:  ECs2443
  Ype:  YPO2679
  Sty:  STM1313
  Vch:  VC1211_1 VC1282
  Bbu:  BBB04
_______

[C] COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)
  Afu:  AF0376
  Mac:  MA1011 MA3865
  Mth:  MTH1713
  Mja:  MJ0112
  Mka:  MK0723
_______

[F] COG1457 Purine-cytosine permease and related proteins
  Tac:  Ta0597 Ta1213
  Tvo:  TVN0623
  Pho:  PH1159
  Pab:  PAB1643
  Sso:  SSO1665
  Sce:  YER056c YER060w YER060w-a YGL186c
  Lin:  lin0473
  Bsu:  BS_yxlA
  Bha:  BH1882
  Eco:  codB
  EcZ:  ZcodB
  Ecs:  ECs0389
  Sty:  STM3333
  Pae:  PA0438 PA1419 PA2073 PA5099
  Pmu:  PM0564
  Nme:  NMB2067
  NmA:  NMA0365
_______

[R] COG1458 Predicted DNA-binding protein containing PIN domain
  Afu:  AF1936
  Mac:  MA0963
  Mth:  MTH243
  Mja:  MJ0950
  Mka:  MK1237
  Pho:  PH1839
  Pab:  PAB0263
  Ape:  APE1564
  Aae:  aq_880
_______

[NU] COG1459 Type II secretory pathway, component PulF
  Aae:  aq_1285 aq_747
  Tma:  TM0094
  Fnu:  FN2094
  Dra:  DR1863
  Cac:  CAC2104
  Lla:  L0314
  Spy:  SPy0102
  Spn:  SP2052
  Sau:  SA1373
  Lin:  lin1383
  Bsu:  BS_comGB
  Bha:  BH2831
  Syn:  slr0162 slr0163
  Nos:  all2442
  Eco:  hofC hofF
  EcZ:  ZhofC
  Ecs:  ECs0110
  Ype:  YPO3427
  Sty:  STM0142
  Vch:  VC0406 VC0836 VC2425 VC2731
  Pae:  PA0687 PA2676 PA3102 PA4527
  Hin:  HI0297
  Pmu:  PM0086
  Xfa:  XF1518 XF2538
  Nme:  NMB0333
  NmA:  NMA2155
  Rso:  RSc2309 RSc2826 RSc3116 RSp0149 RSp0467
  Mlo:  mlr6821
  Ccr:  CC0175
  Ctr:  CT570
  Cpn:  CPn0817
_______

[S] COG1460 Uncharacterized protein conserved in archaea
  Afu:  AF1530
  Hbs:  VNG1169C
  Mac:  MA1444
  Mth:  MTH1324
  Mja:  MJ0039
  Mka:  MK1659
  Tac:  Ta1298
  Tvo:  TVN0313
  Pho:  PH1127
  Pab:  PAB0732
  Sso:  SSO0751
  Ape:  APE0549
_______

[R] COG1461 Predicted kinase related to dihydroxyacetone kinase
  Tma:  TM1772
  Fnu:  FN1927_1
  Dra:  DR0390
  Cac:  CAC1735
  Cgl:  Cgl1293
  Mtu:  Rv2974c Rv2975c
  MtC:  MT3052 MT3052.1
  Lla:  L174523_1 L193593
  Spy:  SPy1885
  Spn:  SP0443
  Sau:  SA1069
  Lin:  lin0599_1 lin1928
  Bsu:  BS_yloV
  Bha:  BH2498
  Uur:  UU207
  Mpu:  MYPU_1610
  Mpn:  MPN547
  Mge:  MG369
_______

[M] COG1462 Uncharacterized protein involved in formation of curli polymers
  Aae:  aq_1148
  Dra:  DR1733
  Syn:  sll1835
  Nos:  alr3345
  Eco:  csgG
  EcZ:  ZcsgG
  Ecs:  ECs1414
  Ype:  YPO2972
  Sty:  STM1139
  Pae:  PA0045
  Nme:  NMB1126 NMB1164
  NmA:  NMA1335
  Rso:  RSp0673
  Ccr:  CC1695 CC2629
_______

[Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component
  Aae:  aq_1533 aq_494
  Mtu:  Rv0169 Rv0170 Rv0171 Rv0172 Rv0173 Rv0174 Rv0589
        Rv0590 Rv0591 Rv0592 Rv0593 Rv0594 Rv1966 Rv1967
        Rv1968 Rv1969 Rv1970 Rv1971 Rv3494c Rv3495c Rv3496c
        Rv3497c Rv3498c Rv3499c
  MtC:  MT0178 MT0179 MT0180 MT0181 MT0182 MT0183 MT0618
        MT0619 MT0621 MT0622 MT0623 MT0624 MT2018 MT2019
        MT2020 MT2021 MT2022 MT2023 MT3598 MT3599 MT3600
        MT3601 MT3602 MT3603
  Mle:  ML2589 ML2590 ML2591 ML2592 ML2593 ML2594
  Syn:  sll0751 sll0752 sll1002
  Nos:  alr0181
  Eco:  yrbD
  EcZ:  ZyrbD
  Ecs:  ECs4072
  Ype:  YPO3573
  Sty:  STM3311
  Vch:  VC2518
  Pae:  PA3213 PA4454
  Hin:  HI1085
  Pmu:  PM0176
  Xfa:  XF0419 XF1301
  Nme:  NMB1964
  NmA:  NMA0487
  Rso:  RSc0315 RSc2960
  Hpy:  HP1464
  jHp:  jhp1357
  Cje:  Cj1648
  Atu:  AGc3032
  Sme:  SMc00176
  Bme:  BMEI0963
  Mlo:  mll0798
  Ccr:  CC2320 CC3694
  Rpr:  RP724
  Rco:  RC1106
_______

[P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen
  Fnu:  FN0658
  Dra:  DR1358 DR1359
  Cac:  CAC0986
  Cgl:  Cgl0619
  Lla:  L117444 L118475 L119452 L120334
  Spy:  SPy0319
  Spn:  SP0149
  Sau:  SA0422 SA0771
  Lin:  lin0313 lin2512
  Bsu:  BS_yhcJ BS_yusA
  Bha:  BH3479
  Eco:  nlpA yaeC
  EcZ:  ZnlpA ZyaeC
  Ecs:  ECs0199 ECs4595
  Ype:  YPO1071 YPO1317
  Sty:  STM0245 STM0510
  Vch:  VC0905
  Pae:  PA2349 PA3931 PA5505
  Hin:  HI0620
  Pmu:  PM1730
  Xfa:  XF0873
  Nme:  NMB1946
  NmA:  NMA0506
  Rso:  RSc0922 RSc3386
  Hpy:  HP1564
  jHp:  jhp1472
  Cje:  Cj0770c Cj0771c Cj0772c Cj1200
  Atu:  AGl761
  Sme:  SMc03157
  Bme:  BMEI1954 BMEII0338
  Mlo:  mll4794
  Ccr:  CC2664
  Cpn:  CPn0278
  Tpa:  TP0821
_______

[E] COG1465 Predicted alternative 3-dehydroquinate synthase
  Afu:  AF0229
  Hbs:  VNG0310C
  Mac:  MA4592
  Mth:  MTH580
  Mja:  MJ1249
  Mka:  MK1408
  Aae:  aq_1922
_______

[L] COG1466 DNA polymerase III, delta subunit
  Aae:  aq_1104
  Tma:  TM0181
  Dra:  DR1244
  Cac:  CAC1273
  Cgl:  Cgl2295
  Mtu:  Rv2413c
  MtC:  MT2486
  Mle:  ML0603
  Lla:  L102491
  Spy:  SPy1407
  Spn:  SP0765
  Sau:  SA1415
  Lin:  lin1516
  Bsu:  BS_yqeN
  Bha:  BH1337
  Syn:  sll0544
  Nos:  alr3444 alr7574
  Eco:  holA
  EcZ:  ZholA
  Ecs:  ECs0678
  Ype:  YPO2608
  Sty:  STM0646
  Buc:  BU445
  Vch:  VC0953
  Pae:  PA3989
  Hin:  HI0923
  Pmu:  PM1216
  Xfa:  XF2178
  Nme:  NMB0708
  NmA:  NMA0913
  Rso:  RSc2742
  Hpy:  HP1247
  jHp:  jhp1168
  Cje:  Cj0630c
  Atu:  AGc4988
  Sme:  SMc02802
  Bme:  BMEI0011
  Mlo:  mlr4475
  Ccr:  CC3751
  Rpr:  RP189
  Rco:  RC0238
  Ctr:  CT047
  Cpn:  CPn0383
  Tpa:  TP0588
  Bbu:  BB0455
  Uur:  UU328
  Mpu:  MYPU_4620
  Mpn:  MPN450
  Mge:  MG315
_______

[L] COG1467 Eukaryotic-type DNA primase, catalytic (small) subunit
  Afu:  AF0742 AF2298
  Hbs:  VNG1470G
  Mac:  MA0648
  Mth:  MTH585
  Mja:  MJ0839
  Mka:  MK0586
  Tac:  Ta0975m
  Tvo:  TVN1121
  Pho:  PH0195
  Pab:  PAB2236
  Pya:  PAE3036
  Sso:  SSO1048
  Ape:  APE0438
  Sce:  YIR008c
  Spo:  SPAC6B12.10c
  Ecu:  ECU08g0630
_______

[L] COG1468 RecB family exonuclease
  Afu:  AF1877 AF2436
  Mac:  MA3671
  Mth:  MTH1085 MTH1233
  Mja:  MJ0377
  Pho:  PH0175 PH1747 PHS033
  Pab:  PAB2143
  Pya:  PAE0079 PAE0198 PAE1763
  Sso:  SSO0001 SSO1392 SSO1449
  Ape:  APE1239
  Aae:  aq_370
  Tma:  TM1798
  Fnu:  FN1178
  Spy:  SPy1563
  Bha:  BH0340
  Nos:  alr1567
_______

[S] COG1469 Uncharacterized conserved protein
  Afu:  AF1179
  Hbs:  VNG1901C
  Mac:  MA4517
  Mth:  MTH1196
  Mja:  MJ0775
  Mka:  MK0485
  Tac:  Ta1138
  Tvo:  TVN1214
  Pho:  PH1783
  Pab:  PAB0223
  Ape:  APE2308
  Tma:  TM0039
  Sau:  SA0524
  Bsu:  BS_yciA
  Bha:  BH0998
  Pae:  PA5539
  Xfa:  XF2096
  Nme:  NMB0803
  NmA:  NMA1013
  Rso:  RSc2220
_______

[S] COG1470 Predicted membrane protein
  Afu:  AF1138
  Mac:  MA1537 MA4361
  Pho:  PH1368
  Pab:  PAB2446
  Bha:  BH3215
_______

[J] COG1471 Ribosomal protein S4E
  Afu:  AF1913
  Hbs:  VNG1703G
  Mac:  MA1084
  Mth:  MTH15
  Mja:  MJ0468
  Mka:  MK1220
  Tac:  Ta1259
  Tvo:  TVN0337
  Pho:  PH1766
  Pab:  PAB2397
  Pya:  PAE3313
  Sso:  SSO0705
  Ape:  APE0356
  Sce:  YHR203c YJR145c
  Spo:  SPAC959.07 SPBC19F8.08 SPBC21B10.10
  Ecu:  ECU08g0870
_______

[G] COG1472 Beta-glucosidase-related glycosidases
  Sso:  SSO3032
  Spo:  SPBC1683.04
  Tma:  TM0025 TM0076 TM0809
  Dra:  DR1333
  Cac:  CAC0182 CAC1075
  Cgl:  Cgl0317 Cgl0318 Cgl2792
  Mtu:  Rv0186 Rv0237
  MtC:  MT0195 MT0251
  Mle:  ML2569
  Lla:  L100350
  Lin:  lin1840
  Bsu:  BS_ybbD
  Bha:  BH0675 BH1908
  Syn:  sll1538
  Nos:  all1831
  Eco:  bglX ycfO
  EcZ:  ZbglX ZycfO
  Ecs:  ECs1485 ECs3019
  Ype:  YPO0616 YPO1615 YPO2803
  Sty:  STM1209 STM2166
  Vch:  VC0692
  Pae:  PA1726 PA3005
  Hin:  HI0959
  Pmu:  PM0071
  Xfa:  XF0439 XF0845 XF2355
  Nme:  NMB0530
  NmA:  NMA0708
  Rso:  RSc0769 RSc1068
  Atu:  AGc3141
  Sme:  SMc02071
  Bme:  BMEI1087
  Mlo:  mll1089 mll9166
  Ccr:  CC0797 CC0968 CC1105 CC1756 CC2006 CC2052 CC3054
  Rpr:  RP706
  Rco:  RC1086
  Bbu:  BB0002 BB0620
_______

[R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase
  Hbs:  VNG0437C
  Mac:  MA1192
  Tac:  Ta0235
  Tvo:  TVN0740 TVN1360
  Pho:  PH0722 PH1043
  Pab:  PAB0873
  Sso:  SSO1355 SSO1952
  Tma:  TM1516
  Fnu:  FN0590 FN0703 FN1063 FN1186
  Dra:  DR0339 DR1711
  Cac:  CAC0295 CAC0921 CAC1014
  Cgl:  Cgl0102 Cgl0667 Cgl2031 Cgl2860
  Mtu:  Rv3305c Rv3306c
  MtC:  MT3404 MT3405
  Lla:  L182020 L80177
  Spn:  SP2096
  Sau:  SA0098 SA0507 SA1230 SA1935 SA2120
  Lin:  lin0542 lin1011 lin2950 lin2952
  Bsu:  BS_amhX BS_hipO BS_yhaA BS_ykuR BS_yxeP
  Bha:  BH1613 BH2668
  Syn:  sll0100 slr1653
  Nos:  all2102 alr4934
  Eco:  abgB ydaJ
  EcZ:  Z2427 Z5522 ZydaJ
  Ecs:  ECs1921 ECs1922 ECs4892
  Pae:  PA2922 PA4344
  Hin:  HI0584
  Pmu:  PM1300
  Rso:  RSc2511 RSc2871
  Cje:  Cj0605 Cj0985c
  Atu:  AGc4953 AGl2386 AGl2766 AGl2806 AGl2896 AGl3029 AGl849
        AGl879
  Sme:  SMb21279 SMc00682 SMc02024 SMc02256
  Bme:  BMEI0033 BMEI0034
  Mlo:  mll7671 mlr2296 mlr3583 mlr7940 mlr9207
  Ccr:  CC1556 CC2456 CC2809
_______

[LO] COG1474 Cdc6-related protein, AAA superfamily ATPase
  Afu:  AF0244 AF0695
  Hbs:  VNG0045C VNG1224G VNG2271G VNG2411G VNG6091G VNG6150G VNG6164G
        VNG6187G VNG6272G VNG6363G VNG7070 VNG7138 VNG7139
  Mac:  MA0001 MA0085
  Mth:  MTH1412 MTH1599
  Tac:  Ta0451m Ta0636
  Tvo:  TVN0696 TVN0758 TVN1044 TVN1466 TVN1477
  Pho:  PH0124
  Pab:  PAB2265
  Pya:  PAE0737
  Sso:  SSO0257 SSO0771 SSO2184
  Ape:  APE0152 APE0475
  Sce:  YJL194w YLR442c_2 YML065w_2
  Spo:  SPBC14C8.07c SPBC29A10.15
  Ecu:  ECU03g1030 ECU09g0220
_______

[K] COG1475 Predicted transcriptional regulators
  Afu:  AF1259_2
  Hbs:  VNG0651G_2
  Mth:  MTH1282_2
  Mja:  MJ0188_2
  Pho:  PH0530 PH1311
  Pab:  PAB1362
  Pya:  PAE0369_2
  Sso:  SSO0115
  Ape:  APE0702
  Aae:  aq_324 aq_499
  Dra:  DR0012 DRA0002 DRB0002 DRB0030
  Cac:  CAC3729 CAC3731
  Cgl:  Cgl3034
  Mtu:  Rv3917c
  MtC:  MT4036
  Mle:  ML2706
  Lla:  L0210 L152305 L69383
  Spy:  SPy0190 SPy0679_1 SPy2217
  Spn:  SP2240
  Sau:  SA0120 SA0348 SA2498
  Lin:  lin1262_1 lin1346 lin1737_1 lin2922 lin2926
  Bsu:  BS_spo0J BS_yyaA
  Bha:  BH3535_1 BH4057 BH4059
  Nos:  alr5348_1 alr7083 alr7582 alr8007 alr9027
  Eco:  ybdM ynaK
  EcZ:  Z1204 Z1644 ZybdM
  Ecs:  ECs0640 ECs1387
  Ype:  YPCD1.12c YPMT1.28c YPMT1.29c YPMT1.59c YPMT1.67c
  Sty:  PSLT053 PSLT068 STM0604
  Vch:  VC2772 VCA1114
  Pae:  PA2126 PA5562
  Xfa:  XF0061 XF2281 XFa0059
  Nme:  NMB1944
  NmA:  NMA0508
  Rso:  RSc0844_1 RSc0845_1 RSc2617 RSc3325 RSp0004 RSp0413 RSp0570_1
        RSp1617
  Hpy:  HP1138
  jHp:  jhp1066
  Cje:  Cj0101
  Atu:  AGc5128 AGl1845 AGpA3 AGpA52_1 AGpA53 AGpT191 AGpT94
  Sme:  SMa2147 SMa2393 SMb20045 SMb20599 SMc02801
  Bme:  BMEI0010 BMEII0092
  Mlo:  mll4477 mll9312 mll9352 mll9653 mlr0109 mlr6157 mlr9703
  Ccr:  CC3752
  Rpr:  RP059
  Rco:  RC0087
  Ctr:  CT688
  Cpn:  CPn0684
  Tpa:  TP0271
  Bbu:  BB0434 BB0731
_______

[K] COG1476 Predicted transcriptional regulators
  Afu:  AF1627 AF1793
  Hbs:  VNG0471C VNG6009H VNG7007
  Mac:  MA3984 MA4668
  Mth:  MTH1328
  Mja:  MJ0272
  Pab:  PAB7155
  Dra:  DR2259 DR2454
  Cac:  CAC1463 CAC1869 CAC2473 CAC2495 CAC3324
  Lla:  L126409 L6724
  Spy:  SPy1386 SPy1934
  Spn:  SP0333 SP1131 SP1423 SP2119
  Sau:  SA0337 SA1665
  Lin:  lin0437
  Bsu:  BS_yhzAs
  Bha:  BH0364 BH0460
  Nos:  all5131_1
  Pae:  PA4077
  Ccr:  CC2232
_______

[H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis
  Mac:  MA0657
  Aae:  aq_1258
  Tma:  TM1553
  Fnu:  FN2031
  Dra:  DR1794
  Cac:  CAC2761 CAC2766
  Lla:  L124107 L171943
  Spy:  SPy1138
  Spn:  SP1470
  Lin:  lin2785
  Eco:  apbE
  EcZ:  ZyojL
  Ecs:  ECs3103
  Ype:  YPO3234
  Sty:  STM2266
  Vch:  VC2289
  Pae:  PA2993
  Hin:  HI0172
  Pmu:  PM1334
  Xfa:  XF0594
  Nme:  NMB0563
  NmA:  NMA0746 NMA1962
  Rso:  RSc0611 RSp1366
  Sme:  SMa1188
  Bme:  BMEII0967 BMEII1010
  Mlo:  mll6620
  Ccr:  CC3062
  Ctr:  CT077
  Cpn:  CPn0336
  Tpa:  TP0796
_______

[S] COG1478 Uncharacterized conserved protein
  Afu:  AF2256
  Hbs:  VNG2586C
  Mac:  MA0135 MA3512
  Mth:  MTH1019
  Mja:  MJ0768
  Mka:  MK0971
  Mtu:  Rv3262_1
  MtC:  MT3361_1
  Mle:  ML0758_1
  Spy:  SPy0536
  Ctr:  CT611
  Cpn:  CPn0760
_______

[S] COG1479 Uncharacterized conserved protein
  Hbs:  VNG1585Cm
  Mac:  MA2417_1
  Mja:  MJ0686_1
  Pho:  PH0009
  Tma:  TM0991_1
  Fnu:  FN0677
  Cac:  CAC1168
  Cgl:  Cgl0713 Cgl1252_1
  Lin:  lin0337 lin0833
  Nos:  all3615_1 all4179 all8551 alr1266 alr4229 alr5156 alr5159
  EcZ:  Z5943m_1 Z5949 Z5950
  Ecs:  ECs5304 ECs5305_1 ECs5309 ECs5310
  Ype:  YPO3437
  Vch:  VC1766 VC1767 VCA0199
  Pmu:  PM0594 PM0595
  NmA:  NMA2230
  Hpy:  HP0186 HP0187 HP0188 HP0426 HP0513_1 HP0629 HP0937
        HP0938 HP1396 HP1397 HP1409
  jHp:  jhp0174 jhp0462_1 jhp0572 jhp0872 jhp0873 jhp0955 jhp0957
        jhp1301 jhp1302 jhp1430 jhp1431
  Cje:  Cj0008
  Uur:  UU090 UU527
  Mpu:  MYPU_1870
_______

[R] COG1480 Predicted membrane-associated HD superfamily hydrolase
  Tma:  TM1508
  Fnu:  FN0745
  Cac:  CAC1292
  Lin:  lin1503
  Bsu:  BS_yqfF
  Bha:  BH1362
  Syn:  slr0104
  Nos:  alr2784
  Cpn:  CPn0048
  Tpa:  TP0651
_______

[S] COG1481 Uncharacterized protein conserved in bacteria
  Tma:  TM1708
  Fnu:  FN0706
  Cac:  CAC0513
  Cgl:  Cgl1551
  Mtu:  Rv1423
  MtC:  MT1466
  Mle:  ML0565
  Lla:  L190464
  Spy:  SPy0654
  Spn:  SP1564
  Sau:  SA0722
  Lin:  lin2615
  Bsu:  BS_yvcL
  Bha:  BH3567
  Uur:  UU073
  Mpu:  MYPU_2260
  Mpn:  MPN241
  Mge:  MG103
_______

[G] COG1482 Phosphomannose isomerase
  Afu:  AF0035
  Sce:  YER003c
  Spo:  SPBC2G2.16
  Tma:  TM0736
  Dra:  DRA0048
  Cac:  CAC2918
  Cgl:  Cgl0726
  Mtu:  Rv3255c
  MtC:  MT3353
  Mle:  ML0765
  Lla:  L179409
  Spy:  SPy1810
  Spn:  SP0736
  Sau:  SA1945 SA2435
  Lin:  lin2215
  Bsu:  BS_pmi BS_ydhS BS_yjdE
  Bha:  BH3916
  Eco:  manA
  EcZ:  ZmanA
  Ecs:  ECs2319
  Ype:  YPO2263
  Sty:  STM1467
  Vch:  VC0269 VC1827
  Pmu:  PM0829
  Bbu:  BB0407
  Mpu:  MYPU_7250
_______

[R] COG1483 Predicted ATPase (AAA+ superfamily)
  Afu:  AF2338 AF2339 AF2340
  Mka:  MK1260
  Pho:  PH0902
  Pab:  PAB0589
  Ape:  APE0415
  Tma:  TM0988
  Sme:  SMc02155
_______

[L] COG1484 DNA replication protein
  Mac:  MA0004 MA1049 MA1533 MA1578 MA1883 MA2028 MA2079
        MA2090 MA2201 MA2578 MA2739 MA2821 MA3123 MA3327
        MA3353 MA3433 MA3505 MA3760 MA4133 MA4529
  Aae:  aq_910
  Cac:  CAC1933 CAC3588
  Mtu:  Rv2944 Rv3427c Rv3638
  MtC:  MT3016 MT3740
  Lla:  L0281 L0311 L0312
  Spy:  SPy0340
  Spn:  SP1137 SP1711
  Sau:  SA1507 SA2013
  Lin:  lin1245 lin1595 lin1752 pli0001
  Bsu:  BS_dnaI BS_xkdC BS_yqaM
  Bha:  BH3144 BH3541 BH3966 BH3999 BH4000
  Eco:  dnaC ydaV
  EcZ:  Z1338 Z2396 Z6069 ZdnaC
  Ecs:  ECs1074 ECs1945 ECs2275 ECs5321
  Ype:  YPCD1.02 YPCD1.96c YPMT1.02 YPMT1.57c YPO0030 YPO0096 YPO0172
        YPO0248 YPO0385 YPO0527 YPO0566 YPO0638 YPO0779 YPO0825
        YPO0923 YPO1014 YPO1085 YPO1131 YPO1339 YPO1426 YPO1519
        YPO1622 YPO1691 YPO1730 YPO1751 YPO1901 YPO1969 YPO2025
        YPO2086 YPO2177 YPO2364 YPO2397 YPO2517 YPO2642 YPO2722
        YPO2809 YPO2931 YPO3208 YPO3252 YPO3283 YPO3435 YPO3543
        YPO3592 YPO3700 YPO3755 YPO3773 YPO4009 YPPCP1.02
  Sty:  STM1015 STM2625 STM4543
  Buc:  BU021
  Rso:  RSc0248 RSc2334 RSp0452 RSp0953
  Atu:  AGl50
  Sme:  SMa0776 SMa1073 SMc03281
  Mlo:  mll6046 mll6090 mll6223 mll6227 mll6232 mlr6037
  Uur:  UU307
_______

[R] COG1485 Predicted ATPase
  Sce:  YEL052w
  Spo:  SPBC115.02c
  Dra:  DR0759
  Mtu:  Rv2670c
  MtC:  MT2744
  Eco:  yhcM
  EcZ:  ZyhcM
  Ecs:  ECs4105
  Ype:  YPO3564
  Sty:  STM3346
  Vch:  VC0568
  Pae:  PA2353 PA4438 PA4539
  Xfa:  XF1828
  Nme:  NMB1306
  NmA:  NMA1520
  Rso:  RSc1272
  Atu:  AGc4785
  Sme:  SMc02478
  Bme:  BMEI0136
  Mlo:  mll4310
  Ccr:  CC3531
  Rpr:  RP212
  Rco:  RC0282
_______

[G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
  Tma:  TM0434 TM0752 TM1068 TM1281 TM1834
  Cac:  CAC0533 CAC3426
  Lin:  lin0526 lin0540 lin2454
  Bsu:  BS_glvA BS_licH BS_lplD BS_melA
  Bha:  BH0183 BH0912 BH2228
  Eco:  celF glvG melA
  EcZ:  Z5177 ZcelF ZmelA
  Ecs:  ECs2440 ECs4622 ECs5101
  Ype:  YPO0166
  Sty:  STM1316 STM4298
  Vch:  VC1284
  Atu:  AGl436 AGl446
  Sme:  SMb21463 SMb21643 SMb21648
  Mlo:  mlr6443 mlr6450
_______

[R] COG1487 Predicted nucleic acid-binding protein, contains PIN domain
  Afu:  AF0610m AF0618 AF1479 AF1690 AF1996
  Mac:  MA0982 MA1515
  Mja:  MJ0914 MJ1121
  Pho:  PH0500 PH0708 PHS031a
  Pab:  PAB1019 PAB1585 PAB1741 PAB2079
  Pya:  PAE0033
  Sso:  SSO1975 SSO2096 SSO6663
  Dra:  DR0419 DR1530 DR2102
  Mtu:  Rv0229c Rv0301 Rv0595c Rv0627 Rv0665 Rv1114 Rv1397c
        Rv1561 Rv1953 Rv2010 Rv2527 Rv2546 Rv2548 Rv2757c
  MtC:  MT0239 MT0314 MT0625 MT0693 MT1144 MT1441 MT1612
        MT2003 MT2065 MT2602 MT2622 MT2624 MT2827
  Syn:  sll0690 ssl2923
  Nos:  all1495 all2196 alr3479 alr4601 alr8026 asl3128
  Sty:  PSLT106 STM3033
  Hin:  HI0322 HI0947
  Xfa:  XF0291 XF1589
  Rso:  RSc0871
  Atu:  AGl3577 AGpA21
  Sme:  SMa0453 SMa0981 SMa2231 SMb21510 SMb21511 SMb21651 SMc00687
        SMc01521 SMc02657 SMc04881
  Mlo:  mll1670 mll3899 mll5078 mlr5903
  Ccr:  CC0031
  Rco:  RC0379 RC1318
_______

[H] COG1488 Nicotinic acid phosphoribosyltransferase
  Afu:  AF0821
  Hbs:  VNG2541Cm
  Mac:  MA2533
  Mka:  MK1400
  Tac:  Ta1145
  Tvo:  TVN1243
  Pho:  PH1868
  Pab:  PAB1131
  Pya:  PAE2990
  Sso:  SSO0354
  Ape:  APE1273
  Sce:  YOR209c
  Spo:  SPAC1486.06
  Aae:  aq_1056
  Tma:  TM0474
  Fnu:  FN0348
  Dra:  DR0294 DRA0272
  Cac:  CAC1002 CAC1780
  Cgl:  Cgl2467
  Mtu:  Rv0573c Rv1330c
  MtC:  MT0601 MT1372
  Lla:  L107468
  Spy:  SPy1653
  Spn:  SP1421
  Sau:  SA1729
  Lin:  lin1077
  Bsu:  BS_yueK
  Bha:  BH3249
  Syn:  slr0788
  Nos:  alr2482
  Eco:  pncB
  EcZ:  ZpncB
  Ecs:  ECs1014
  Ype:  YPO1413
  Sty:  STM1004
  Buc:  BU361
  Vch:  VCA0098
  Pae:  PA4376 PA4919
  Pmu:  PM0999
  Xfa:  XF1097
  Nme:  NMB1505
  NmA:  NMA1706
  Rso:  RSc1031 RSp0836
  Cje:  Cj0230c
  Atu:  AGc367
  Sme:  SMc02276
  Bme:  BMEI1836
  Mlo:  mll4892
  Tpa:  TP0628
  Bbu:  BB0635
  Uur:  UU276
  Mpu:  MYPU_4830
  Mpn:  MPN047
  Mge:  MG037
_______

[R] COG1489 DNA-binding protein, stimulates sugar fermentation
  Afu:  AF1516
  Mth:  MTH1521
  Tac:  Ta0795
  Tvo:  TVN0704
  Pya:  PAE3378
  Sso:  SSO2571
  Ape:  APE0454
  Aae:  aq_057
  Tma:  TM0565
  Cac:  CAC0144
  Bha:  BH1042
  Syn:  sll2014
  Nos:  alr3085
  Eco:  sfsA
  EcZ:  ZsfsA
  Ecs:  ECs0150
  Ype:  YPO3396
  Sty:  STM0187
  Vch:  VC0597
  Pae:  PA4721
  Hin:  HI1611
  Pmu:  PM0754
  Atu:  AGc2956
  Sme:  SMc00297
  Bme:  BMEI0720
  Ccr:  CC2675
_______

[J] COG1490 D-Tyr-tRNAtyr deacylase
  Sce:  YDL219w
  Spo:  SPAC8C9.05
  Aae:  aq_428
  Tma:  TM0730
  Fnu:  FN0349
  Dra:  DR0890
  Cac:  CAC2273
  Cgl:  Cgl1872
  Mtu:  Rv1897c
  MtC:  MT1948
  Lla:  L110564
  Spy:  SPy1980
  Spn:  SP1644
  Sau:  SA1459
  Lin:  lin1557
  Bsu:  BS_yrvI
  Bha:  BH1243
  Eco:  dtd
  EcZ:  ZyihZ
  Ecs:  ECs4810
  Ype:  YPO0029
  Sty:  STM4028
  Vch:  VC2741
  Pae:  PA5079
  Hin:  HI0670
  Pmu:  PM1615
  Nme:  NMB0347
  NmA:  NMA2140
  Rso:  RSc0497
_______

[J] COG1491 Predicted RNA-binding protein
  Afu:  AF1531
  Hbs:  VNG1168C
  Mac:  MA1442
  Mth:  MTH1325
  Mja:  MJ0038
  Mka:  MK1658
  Tac:  Ta1299
  Tvo:  TVN0314
  Pho:  PH1822
  Pab:  PAB0252
  Pya:  PAE3336
  Sso:  SSO0750
  Ape:  APE0550
_______

[H] COG1492 Cobyric acid synthase
  Afu:  AF1338
  Hbs:  VNG1576G
  Mac:  MA3250
  Mth:  MTH1497 MTH787
  Mja:  MJ0138 MJ0484
  Mka:  MK1414
  Tac:  Ta0075
  Tvo:  TVN0031
  Sso:  SSO3233
  Fnu:  FN0977 FN2070
  Dra:  DRB0012
  Cac:  CAC1374
  Mtu:  Rv0255c
  MtC:  MT0268
  Lin:  lin1171
  Bha:  BH1591
  Syn:  slr0618
  Nos:  alr2377
  Sty:  STM2019
  Vch:  VCA0727
  Pae:  PA1277
  Rso:  RSc2390
  Atu:  AGc5093
  Sme:  SMc04309
  Bme:  BMEI0690
  Mlo:  mll1198
  Ccr:  CC1751 CC2694
_______

[T] COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism
  Mka:  MK1512
  Fnu:  FN1012
  Cac:  CAC1089
  Lla:  L4822
  Spy:  SPy0584
  Spn:  SP1413
  Sau:  SA0715
  Lin:  lin2626
  Bsu:  BS_yvoB
  Bha:  BH3590
  Xfa:  XF1406
  Nme:  NMB0737
  NmA:  NMA0947
  Rso:  RSc0405
  Atu:  AGc51
  Sme:  SMc02752
  Bme:  BMEI2034
  Mlo:  mll5093
  Ccr:  CC0239
  Tpa:  TP0591
  Uur:  UU076
  Mpu:  MYPU_7110
  Mpn:  MPN223
  Mge:  MG085
_______

[G] COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins
  Mac:  MA1152
  Fnu:  FN1159
  Dra:  DR2013
  Cac:  CAC1088
  Cgl:  Cgl0990
  Mtu:  Rv1099c
  MtC:  MT1131
  Mle:  ML1946
  Bsu:  BS_ywjI
  Bha:  BH3431 BH3783
  Syn:  slr2094
  Nos:  alr1041
  Eco:  glpX yggF
  EcZ:  ZglpX ZyggF
  Ecs:  ECs3806 ECs4850
  Sty:  STM4085
  Vch:  VC2688
  Hin:  HI0667
  Pmu:  PM1482
  Bme:  BMEI0726
  Mlo:  mll0929
  Ccr:  CC1384
_______

[O] COG1495 Disulfide bond formation protein DsbB
  Dra:  DR0754
  Bsu:  BS_yolK BS_yvgU
  Bha:  BH1941
  Eco:  dsbB
  EcZ:  ZdsbB
  Ecs:  ECs1680
  Ype:  YPO2141
  Sty:  STM1807 STM1864 STM3194
  Vch:  VC1902
  Pae:  PA0538 PA5256
  Hin:  HI0428
  Pmu:  PM0046
  Xfa:  XF0340
  Nme:  NMB1649
  NmA:  NMA1903
  Rso:  RSc1373 RSp0199
  Hpy:  HP0595_1
  jHp:  jhp0542_1
  Cje:  Cj0017c_1 Cj0865
  Atu:  AGl2587
  Sme:  SMc00738
  Bme:  BMEI0384 BMEII0891
  Mlo:  mlr3476
  Ccr:  CC2196
  Rpr:  RP370
  Rco:  RC0504
  Ctr:  CT176
  Cpn:  CPn0227
_______

[S] COG1496 Uncharacterized conserved protein
  Aae:  aq_167
  Fnu:  FN1561
  Dra:  DR1966
  Cac:  CAC1699
  Cgl:  Cgl2104
  Mtu:  Rv2149c
  MtC:  MT2208
  Mle:  ML0918
  Sau:  SA1030
  Bsu:  BS_ylmD
  Bha:  BH2551
  Syn:  slr1573
  Nos:  all5255
  Eco:  yfiH
  EcZ:  ZyfiH
  Ecs:  ECs3456
  Ype:  YPO1747 YPO3276
  Sty:  STM2661
  Vch:  VC0710
  Pae:  PA1469 PA4543
  Hin:  HI0175
  Pmu:  PM1718
  Xfa:  XF0940
  Nme:  NMB0706
  NmA:  NMA0911
  Rso:  RSc1629
  Cje:  Cj1217c
  Atu:  AGc4025
  Sme:  SMc02683
  Bme:  BMEI0486
  Mlo:  mlr2681
  Ccr:  CC0490
  Rpr:  RP494
  Rco:  RC0672
  Ctr:  CT056
  Cpn:  CPn0374
  Bbu:  BB0467
_______

[K] COG1497 Predicted transcriptional regulator
  Afu:  AF0998
  Hbs:  VNG1548C
  Mac:  MA3015
  Mth:  MTH163
  Mja:  MJ0558
  Mka:  MK1501
  Tac:  Ta1197
  Tvo:  TVN0406
_______

[J] COG1498 Protein implicated in ribosomal biogenesis, Nop56p homolog
  Afu:  AF2088
  Hbs:  VNG1174G
  Mac:  MA0340
  Mth:  MTH1214
  Mja:  MJ0694
  Mka:  MK0559
  Tac:  Ta1243m
  Tvo:  TVN0353
  Pho:  PH0053
  Pab:  PAB2305
  Pya:  PAE3232
  Sso:  SSO0939
  Ape:  APE2199
  Sce:  YGR091w YLR197w YOR310c
  Spo:  SPAC23G3.06 SPBC119.13c SPBC646.10c
  Ecu:  ECU04g0820 ECU09g1600
_______

[J] COG1499 NMD protein affecting ribosome stability and mRNA decay
  Afu:  AF1972
  Hbs:  VNG2474C
  Mac:  MA3869
  Mth:  MTH1768
  Mja:  MJ1650
  Mka:  MK0517
  Tac:  Ta0988
  Tvo:  TVN0478
  Pho:  PH0990
  Pab:  PAB1716
  Pya:  PAE1653
  Sso:  SSO2383
  Ape:  APE0748 APE2334
  Sce:  YHR170w
  Spo:  SPAC16C9.03
  Ecu:  ECU09g1380
_______

[J] COG1500 Predicted exosome subunit
  Afu:  AF0491
  Hbs:  VNG1276C
  Mac:  MA1778
  Mth:  MTH685
  Mja:  MJ0592
  Mka:  MK0384
  Tac:  Ta1291m
  Tvo:  TVN0305
  Pho:  PH1552
  Pab:  PAB0418
  Pya:  PAE2209
  Sso:  SSO0737
  Ape:  APE1167
  Sce:  YLR022c
  Spo:  SPAC4F8.03
  Ecu:  ECU08g1610
_______

[G] COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases
  Tac:  Ta0298
  Tvo:  TVN1302
  Pya:  PAE1968
  Sso:  SSO3022 SSO3051
  Sce:  YBR229c
  Spo:  SPAC1002.03c SPAC30D11.01c SPAPB24D3.10c
  Tma:  TM0308
  Cac:  CAC1085 CAC2252 CAC2891
  Lla:  L129481
  Spn:  SP0312
  Lin:  lin0221 lin0222 lin2538 lin2540
  Bha:  BH0704 BH1905 BH2055
  Nos:  alr4773 alr5331
  Eco:  yicI yihQ
  EcZ:  ZyicI ZyihQ
  Ecs:  ECs4532 ECs4800
  Ype:  YPO0848
  Sty:  STM0041 STM3749 STM4019
  Rso:  RSc1081
  Atu:  AGl3064
  Ccr:  CC0789
_______

[I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
  Afu:  AF1180
  Tac:  Ta0742
  Tvo:  TVN0813
  Pya:  PAE1226
  Sce:  YCL004w YKR031c
  Spo:  SPAC2F7.16c SPBP18G5.02
  Ecu:  ECU11g0850 ECU11g1180
  Tma:  TM0652
  Fnu:  FN0923
  Cac:  CAC1364 CAC1658 CAC3316
  Cgl:  Cgl2685
  Lla:  L186875 L187016
  Spy:  SPy1212
  Spn:  SP0199
  Sau:  SA1155 SA1891
  Lin:  lin0008 lin2646
  Bsu:  BS_ywiE BS_ywjE BS_ywnE
  Bha:  BH2858 BH3803
  Syn:  slr0197_1
  Nos:  all3087_1 alr4223
  Eco:  cls pssA ybhO ymdC
  EcZ:  Zcls ZpssA ZybhO ZymdC
  Ecs:  ECs0867 ECs1424 ECs1749 ECs3452
  Ype:  YPMT1.73 YPO2188 YPO3273
  Sty:  PSLT002 STM0812 STM1148 STM1739 STM2652
  Buc:  BU273
  Vch:  VC0315 VC1670
  Pae:  PA2155 PA3487 PA3727 PA4339 PA5089 PA5310 PA5394
  Hin:  HI0425
  Pmu:  PM1586 PM1856
  Xfa:  XF1087 XF1209
  Nme:  NMB1434
  NmA:  NMA1646
  Rso:  RSc0470 RSc2452 RSc3378 RSp0630 RSp1211 RSp1528
  Hpy:  HP0190 HP0323
  jHp:  jhp0176 jhp0306
  Atu:  AGc3007 AGc4515
  Sme:  SMa2012 SMb20094 SMc02076 SMc04448
  Bme:  BMEII0239
  Mlo:  mlr2852 mlr3991 mlr6311 mlr8077 mlr9675
  Ccr:  CC0522
  Rpr:  RP819
  Rco:  RC1270
  Ctr:  CT084 CT154 CT155 CT157 CT158 CT284
  Cpn:  CPn0329 CPn0435
  Uur:  UU588
  Mpu:  MYPU_6650
_______

[J] COG1503 Peptide chain release factor 1 (eRF1)
  Afu:  AF1220
  Hbs:  VNG1842H VNG2131G
  Mac:  MA0042 MA1008 MA1281
  Mth:  MTH878
  Mja:  MJ0829
  Mka:  MK0759
  Tac:  Ta0534
  Tvo:  TVN0588
  Pho:  PH1584
  Pab:  PAB0396
  Pya:  PAE2906
  Sso:  SSO2339
  Ape:  APE1988
  Sce:  YBR143c
  Spo:  SPAC1834.01
  Ecu:  ECU05g0360
  Aae:  aq_199
_______

[S] COG1504 Uncharacterized conserved protein
  Afu:  AF0029
  Mac:  MA1826 MA3447
  Mth:  MTH938
  Mka:  MK1686
  Pho:  PH1505
  Pab:  PAB1927
_______

[E] COG1505 Serine proteases of the peptidase family S9A
  Pho:  PH1262
  Pab:  PAB0762
  Dra:  DR2503
  Cgl:  Cgl0339
  Mtu:  Rv0457c
  MtC:  MT0473
  Nos:  all2533
  Nme:  NMB1877
  NmA:  NMA0579
  Mlo:  mll1209
  Ccr:  CC3687 CC3688
  Rpr:  RP174
  Rco:  RC0215 RC0216 RC0217 RC0218
_______

[E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
  Hbs:  VNG0409C VNG2302G
  Tac:  Ta0664
  Tvo:  TVN0890 TVN0912
  Pho:  PH0594 PH0863
  Pab:  PAB1300 PAB1418
  Pya:  PAE1002 PAE1189 PAE3573
  Sso:  SSO1419 SSO1433 SSO2141 SSO2693
  Ape:  APE1547 APE1832 APE2290 APE2441
  Sce:  YHR028c YOR219c
  Spo:  SPAC14C4.15c SPACUNK4.08 SPBC1711.12
  Fnu:  FN1128
  Dra:  DR0165
  Sau:  SA1611
  Bsu:  BS_ytmA BS_yuxL
  Bha:  BH3306
  Syn:  slr0825
  Pae:  PA1990
  Xfa:  XF0015 XF2260 XF2551
  Atu:  AGc1456 AGc1537 AGpA205 AGpA267
  Ccr:  CC1048 CC1986 CC2154 CC2671 CC2710 CC3246 CC3723
  Rco:  RC0603
_______

[S] COG1507 Uncharacterized conserved protein
  Aae:  aq_1574
  Tma:  TM1078
  Cgl:  Cgl0951
  Mtu:  Rv1025
  MtC:  MT1053
  Mle:  ML0257
_______

[K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
  Aae:  aq_599
  Cac:  CAC0707
  Lin:  lin2555
  Bsu:  BS_sigL
  Bha:  BH3563
  Eco:  rpoN
  EcZ:  ZrpoN
  Ecs:  ECs4081
  Ype:  YPO3582
  Sty:  STM3320
  Vch:  VC2529
  Pae:  PA4462
  Xfa:  XF1408
  Nme:  NMB0217
  NmA:  NMA0049
  Rso:  RSc0408 RSp1671
  Hpy:  HP0714
  jHp:  jhp0652
  Cje:  Cj0670
  Atu:  AGc581
  Sme:  SMc01139
  Bme:  BMEI1789
  Mlo:  mll3196 mll5872
  Ccr:  CC3599
  Ctr:  CT609
  Cpn:  CPn0771
  Tpa:  TP0111
  Bbu:  BB0450
_______

[E] COG1509 Lysine 2,3-aminomutase
  Mac:  MA3979
  Mja:  MJ0634
  Aae:  aq_1632 aq_454
  Tma:  TM0121
  Fnu:  FN1866
  Dra:  DRA0027
  Bsu:  BS_yodO
  Bha:  BH2255 BH2943
  Eco:  yjeK
  EcZ:  ZyjeK
  Ecs:  ECs5127
  Ype:  YPO0353
  Sty:  STM4333
  Vch:  VC2661
  Hin:  HI0329
  Pmu:  PM0099
  Xfa:  XF2474
  Atu:  AGc4629
  Sme:  SMc00355
  Mlo:  mll1971 mlr5971
  Ccr:  CC0716
  Tpa:  TP0121
_______

[K] COG1510 Predicted transcriptional regulators
  Mja:  MJ1563
  Pho:  PH0289 PH0825
  Pab:  PAB1243
  Sau:  SA2407
  Bsu:  BS_yuaC BS_yvaV BS_yvbF
  Rso:  RSp1241
  Atu:  AGl1535
  Bme:  BMEII0763
_______

[S] COG1511 Predicted membrane protein
  Mth:  MTH1858
  Dra:  DR0075
  Cac:  CAC0020_2 CAC2582 CAC2583 CAC3589 CAC3696
  Cgl:  Cgl0271 Cgl1600
  Mtu:  Rv0180c
  MtC:  MT0189
  Mle:  ML2600
  Lla:  L103741 L118462
  Spy:  SPy2176
  Spn:  SP2233
  Sau:  SA0272 SA2164 SA2436
  Lin:  lin0050 lin0653 lin2460
  Bsu:  BS_yhgE BS_yueB
  Bha:  BH0721 BH0971 BH2146
_______

[R] COG1512 Beta-propeller domains of methanol dehydrogenase type
  Tma:  TM0962
  Lla:  L188985
  Bsu:  BS_ydjH
  Bha:  BH1807
  Syn:  sll1390
  Nos:  alr4100
  Eco:  ygcG
  EcZ:  Z4091 Z4092 Z4093
  Ecs:  ECs3635 ECs3637 ECs3638
  Pae:  PA0536 PA1450 PA1451
  Pmu:  PM0783
  Rso:  RSc0663
  Bme:  BMEI0229
  Mlo:  mll4127 mll4128
  Ccr:  CC3456
  Tpa:  TP0561
_______

[P] COG1513 Cyanate lyase
  Aae:  aq_212
  Syn:  slr0899
  Nos:  all1291
  Eco:  cynS
  EcZ:  ZcynS
  Ecs:  ECs0393
  Pae:  PA2052
  Rso:  RSp1630
_______

[J] COG1514 2'-5' RNA ligase
  Afu:  AF2157
  Mac:  MA0656
  Mth:  MTH583
  Mja:  MJ1568
  Mka:  MK1367
  Tac:  Ta0020
  Tvo:  TVN0066
  Pho:  PH0099
  Pab:  PAB0062
  Pya:  PAE3326
  Sso:  SSO1040
  Ape:  APE1792
  Aae:  aq_768
  Tma:  TM1860
  Dra:  DR2339
  Cac:  CAC1603
  Cgl:  Cgl2272
  Sau:  SA0873
  Bsu:  BS_yjcG BS_ytlP
  Bha:  BH1439 BH3270
  Nos:  alr1166
  Eco:  ligT
  EcZ:  ZyadP
  Ecs:  ECs0151
  Ype:  YPO3395
  Sty:  STM0188
  Pae:  PA2861
  Rso:  RSc1443 RSc2364
  Atu:  AGc477 AGc4856
  Sme:  SMc03835
  Bme:  BMEI1862
  Mlo:  mlr4348
  Ccr:  CC1641 CC3661
_______

[L] COG1515 Deoxyinosine 3'endonuclease (endonuclease V)
  Afu:  AF0129
  Hbs:  VNG0363G
  Mka:  MK1435
  Tac:  Ta0460_2
  Tvo:  TVN0781_2
  Pho:  PH0661
  Pab:  PAB0916
  Pya:  PAE0684
  Sso:  SSO2454
  Ape:  APE0506
  Spo:  SPAC1F12.06c
  Aae:  aq_548
  Tma:  TM1865
  Dra:  DR2162
  Cac:  CAC0363
  Bsu:  BS_ywqL
  Nos:  all4085
  Eco:  nfi
  EcZ:  Znfi
  Ecs:  ECs4921
  Ype:  YPO3733
  Sty:  STM4168
  Xfa:  XF1892
_______

[NUO] COG1516 Flagellin-specific chaperone FliS
  Aae:  aq_2002
  Tma:  TM1179
  Cac:  CAC2206
  Lin:  lin0716
  Bsu:  BS_fliS
  Bha:  BH1476 BH3613
  Eco:  fliS
  EcZ:  ZfliS
  Ecs:  ECs2664
  Ype:  YPO0741 YPO1840
  Sty:  STM1961
  Vch:  VC2138
  Pae:  PA1095
  Rso:  RSp0384
  Hpy:  HP0753
  jHp:  jhp0690
  Cje:  Cj0549
  Tpa:  TP0943
  Bbu:  BB0550
_______

[L] COG1517 Uncharacterized protein predicted to be involved in DNA repair
  Mja:  MJ1666
  Tvo:  TVN0114 TVN0275
  Pho:  PH0168
  Pya:  PAE0117 PAE0119 PAE0121
  Sso:  SSO1389 SSO1711 SSO1787 SSO1788
  Aae:  aq_378
_______

[L] COG1518 Uncharacterized protein predicted to be involved in DNA repair
  Afu:  AF1878 AF2435
  Mac:  MA3670
  Mth:  MTH1084
  Mja:  MJ0378
  Mka:  MK1312
  Tac:  Ta1335
  Tvo:  TVN0106
  Pho:  PH0173 PH1245
  Pya:  PAE0081 PAE0200
  Sso:  SSO1405 SSO1450
  Ape:  APE1240
  Aae:  aq_369
  Tma:  TM1797
  Fnu:  FN1177
  Mtu:  Rv2817c
  MtC:  MT2884
  Spy:  SPy1047 SPy1562
  Lin:  lin2743
  Bha:  BH0341
  Nos:  alr0381 alr1468_2 alr1568
  Eco:  ygbT
  EcZ:  Z4064
  Ecs:  ECs3609
  Ype:  YPO2468
  Sty:  STM2938
  Pmu:  PM0311 PM1126
  NmA:  NMA0630
  Cje:  Cj1522c
_______

[M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase
  Aae:  aq_326
  Fnu:  FN1606_1
  Eco:  kdtA
  EcZ:  ZkdtA
  Ecs:  ECs4508
  Ype:  YPO0055
  Sty:  STM3724
  Vch:  VC0233
  Pae:  PA4988
  Hin:  HI0652
  Pmu:  PM1305
  Xfa:  XF0105
  Nme:  NMB0014
  NmA:  NMA0261
  Rso:  RSc0693
  Hpy:  HP0957
  jHp:  jhp0891
  Cje:  Cj0707
  Atu:  AGc1254
  Sme:  SMc00894
  Bme:  BMEII1029
  Mlo:  mlr8269
  Ccr:  CC0302
  Rpr:  RP089
  Rco:  RC0118
  Ctr:  CT208
  Cpn:  CPn0154
_______

[S] COG1520 FOG: WD40-like repeat
  Afu:  AF1399
  Hbs:  VNG6189H VNG6297C
  Mac:  MA0850_3 MA1762_2 MA3698_2 MA3698_4 MA3699_2 MA4284_1 MA4284_3
        MA4285_1 MA4287_1 MA4287_3 MA4287_5 MA4290 MA4291_2 MA4291_5
        MA4294 MA4297_1 MA4297_3 MA4299_2 MA4301_1 MA4301_3 MA4302
        MA4305_3 MA4305_6 MA4309_3 MA4310 MA4312_2 MA4312_5 MA4314
        MA4315_3 MA4316 MA4589_2
  Mth:  MTH1485
  Mja:  MJECL22 MJECL23
  Pho:  PH0333
  Pab:  PAB1279
  Tma:  TM1573 TM1575
  Dra:  DR0503 DR0766 DR1769 DR2108_2 DR2518_2 DRC0015
  Mtu:  Rv3035
  MtC:  MT3120
  Mle:  ML1720
  Bsu:  BS_yxaK BS_yxaL
  Eco:  yfgL
  EcZ:  Z3775
  Ecs:  ECs3374
  Ype:  YPO2876
  Sty:  STM2520
  Vch:  VC0762
  Pae:  PA3800
  Xfa:  XF0464 XF2259
  Rso:  RSc1218
  Ccr:  CC1653
  Rpr:  RP232
  Rco:  RC0314
  Bbu:  BB0743
_______

[K] COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor
  Aae:  aq_1924
  Tma:  TM0883
  Fnu:  FN0761
  Dra:  DR0461
  Cac:  CAC3200
  Mtu:  Rv3600c
  MtC:  MT3706
  Mle:  ML0232
  Lin:  lin0253
  Bsu:  BS_yacB
  Bha:  BH0086
  Syn:  slr0812
  Nos:  alr3896
  Pae:  PA4279
  Xfa:  XF1795
  Nme:  NMB2075_2
  NmA:  NMA0357_2
  Rso:  RSc0311
  Hpy:  HP0862
  jHp:  jhp0796
  Cje:  Cj0394c
  Ccr:  CC1935
  Tpa:  TP0431
  Bbu:  BB0527
  Mpu:  MYPU_4730
_______

[K] COG1522 Transcriptional regulators
  Afu:  AF0363 AF0439 AF0474 AF0584 AF0651 AF1121 AF1148
        AF1404 AF1448 AF1593m AF1594m AF1622 AF1723 AF1743
  Hbs:  VNG1071G VNG1123Gm VNG1179C VNG1237C VNG1285G_1 VNG1351G VNG1377G
        VNG1776G VNG1816G VNG1911G VNG1922G VNG2094G
  Mac:  MA0574 MA0575 MA0924 MA1414 MA1588
  Mth:  MTH1193
  Mja:  MJ0151 MJ0723
  Mka:  MK0482_2
  Tac:  Ta0257 Ta0608 Ta0981 Ta1218
  Tvo:  TVN0295 TVN0377 TVN0658 TVN1127 TVN1196 TVN1337
  Pho:  PH0045 PH0061 PH0140 PH0199 PH1013 PH1045 PH1055
        PH1519 PH1592 PH1692 PH1916 PH1919 PHS023 PHS045
  Pab:  PAB0125 PAB0322 PAB0392 PAB0652 PAB1110 PAB1236 PAB1938
        PAB2257 PAB2299 PAB2312 PAB7115 PAB7359
  Pya:  PAE0581 PAE1507 PAE1592 PAE3327 PAE3469 PAE3471
  Sso:  SSO0157 SSO0245 SSO0606 SSO0944 SSO10340 SSO1664 SSO1876
        SSO2131 SSO2347 SSO2581 SSO2652 SSO5522
  Ape:  APE0659a APE0784 APE1460a APE1497 APE1799a APE2565
  Dra:  DR0200 DR1894 DR2287
  Cac:  CAC0977 CAC1467 CAC2793 CAC2794
  Cgl:  Cgl0258 Cgl2604
  Mtu:  Rv2324 Rv2779c Rv3291c
  MtC:  MT2386 MT2849 MT3390
  Bsu:  BS_azlB BS_lrpA BS_lrpB BS_lrpC BS_yezC BS_yugG BS_ywrC
  Bha:  BH0212 BH0423 BH0868 BH3351 BH3641 BH3877
  Eco:  asnC lrp ybaO
  EcZ:  ZasnC Zlrp ZybaO
  Ecs:  ECs0501 ECs0974 ECs4685
  Ype:  YPO0002 YPO1375 YPO1651 YPO3146
  Sty:  STM0459 STM0959 STM1001 STM3876
  Vch:  VC0071 VC1062 VC1713 VC1904 VCA1068
  Pae:  PA0512 PA0513 PA0514 PA0515 PA2028 PA2082 PA2246
        PA2577 PA3965 PA4508 PA4784 PA5308
  Hin:  HI0224 HI0563 HI1596
  Pmu:  PM0254 PM1573
  Nme:  NMB0573 NMB1650
  NmA:  NMA0756 NMA1905
  Rso:  RSc0128 RSc0761 RSc0927 RSc2318 RSc2320 RSc2801 RSc3102
        RSc3354 RSp0482 RSp0645 RSp1317 RSp1348 RSp1377
  Atu:  AGc1339 AGc1730 AGc3460 AGc3968 AGc4633 AGl132 AGl1389
        AGl1547 AGl1694 AGl2051 AGl238 AGl2709 AGl2816
  Sme:  SMa0535 SMa1867 SMb20021 SMb20425 SMb21493 SMc00131 SMc00278
        SMc00425 SMc00678 SMc00681 SMc01168 SMc01223 SMc01403 SMc02235
        SMc02504 SMc03092 SMc03210
  Bme:  BMEI0357 BMEI0447 BMEI0510 BMEI1098 BMEI1845 BMEII0346 BMEII0375
        BMEII0395 BMEII0518 BMEII0563
  Mlo:  mll0557 mll1492 mll3910 mll4468 mll4830 mll5346 mll7129
        mll7935 mll9224 mll9538 mlr0363 mlr1161 mlr1619 mlr1825
        mlr2198 mlr2428 mlr2554 mlr6100 mlr6779 mlr7030 mlr7283
        mlr8310 msl0718
  Ccr:  CC0424 CC0580 CC0805 CC2535 CC2887 CC3169 CC3177
        CC3573
_______

[G] COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases
  Mac:  MA2000
  Sso:  SSO2094
  Tma:  TM1845
  Fnu:  FN0799
  Dra:  DR0264 DR0405
  Cac:  CAC2679
  Cgl:  Cgl2054
  Mtu:  Rv1564c
  MtC:  MT1615
  Spy:  SPy1972
  Spn:  SP0268 SP1118
  Bsu:  BS_amyX
  Bha:  BH3264 BH3697
  Syn:  slr0237 slr1857
  Eco:  glgX
  EcZ:  ZglgX
  Ecs:  ECs4276
  Ype:  YPO3941
  Sty:  STM1558 STM3537
  Vch:  VCA1029
  Pae:  PA2160
  Hin:  HI1358
  Pmu:  PM0542
  Rso:  RSp0238
  Atu:  AGl1566
  Sme:  SMb21446 SMc03926
  Mlo:  mlr7591
  Ctr:  CT042
  Cpn:  CPn0388
  Mpu:  MYPU_6440
_______

[R] COG1524 Uncharacterized proteins of the AP superfamily
  Afu:  AF0247
  Tac:  Ta1349
  Tvo:  TVN0258
  Pho:  PH1114
  Pab:  PAB2429
  Sso:  SSO2423
  Sce:  YCR026c_2 YEL016c YJL062w YKL165c YLL031c
  Spo:  SPAC13G6.03 SPBC27B12.06 SPBC725.05c SPBC839.08c
  Ecu:  ECU07g0310
  Tma:  TM0626 TM1581
  Cac:  CAC0477
  Cgl:  Cgl2398
  Lin:  lin1457
  Bha:  BH1564 BH1955
  Nos:  all0415
  Pae:  PA3251
  Xfa:  XF2599
  Cje:  Cj0729
  Sme:  SMb21538
  Mlo:  mll5120 mll5889 mlr9275
  Ccr:  CC1277 CC2461
_______

[L] COG1525 Micrococcal nuclease (thermonuclease) homologs
  Hbs:  VNG1794C
  Mth:  MTH494
  Mja:  MJ1439
  Mka:  MK1164
  Pho:  PH1212
  Pab:  PAB0704
  Sce:  YGL085w
  Spo:  SPBC19F8.04c SPCC645.08c
  Aae:  aq_710
  Cgl:  Cgl1803
  Sau:  SA0746 SA1160
  Bsu:  BS_yhcR_2 BS_yncB BS_yokF
  Nos:  all0265 all2317 all2918 alr7333 alr7342 alr7381 asr7380
  Pae:  PA5048
  Hin:  HI1296
  Pmu:  PM0881
  Nme:  NMB1510
  NmA:  NMA1710
  Cje:  Cj0979c
  Atu:  AGc2185 AGc3462 AGl1503 AGpT225
  Sme:  SMb20951 SMb21662 SMc02222 SMc04211 SMc04359
  Bme:  BMEI1096 BMEII0499
  Mlo:  mll0560 mll8119 mlr0479_1 mlr5633 mlr9236_2 msl9404
  Mpu:  MYPU_0250 MYPU_1390
  Mpn:  MPN133
  Mge:  MG186
_______

[C] COG1526 Uncharacterized protein required for formate dehydrogenase activity
  Afu:  AF0372
  Mac:  MA0220
  Mth:  MTH1547
  Mja:  MJ0295
  Tac:  Ta0423
  Tvo:  TVN0245
  Pya:  PAE2664
  Sso:  SSO2821
  Cgl:  Cgl0514
  Mtu:  Rv2899c
  MtC:  MT2967
  Sau:  SA2075
  Lin:  lin2729
  Bsu:  BS_narQ
  Bha:  BH2527
  Eco:  fdhD
  EcZ:  ZfdhD
  Ecs:  ECs4821
  Ype:  YPO4060
  Sty:  STM4038
  Vch:  VC1519
  Pae:  PA5180
  Hin:  HI0005
  Pmu:  PM0410
  Rso:  RSc2367 RSp1050
  Cje:  Cj1508c
  Atu:  AGc4748
  Sme:  SMc03085
  Bme:  BMEII0588
  Mlo:  mll5395
  Ccr:  CC1242
_______

[C] COG1527 Archaeal/vacuolar-type H+-ATPase subunit C
  Afu:  AF1164
  Hbs:  VNG2141G
  Mac:  MA4156
  Mth:  MTH957
  Mja:  MJ0219
  Mka:  MK1015
  Tac:  Ta0002
  Tvo:  TVN0050
  Pho:  PH1977
  Pab:  PAB1183
  Pya:  PAE0753
  Sce:  YLR447c
  Spo:  SPAC17A2.03c
  Ecu:  ECU08g1520
  Fnu:  FN1738
  Dra:  DR0698
  Spy:  SPy0151
  Spn:  SP1319
_______

[P] COG1528 Ferritin-like protein
  Afu:  AF0834
  Mac:  MA0161
  Mth:  MTH158
  Ecu:  ECU06g1380
  Tma:  TM1128
  Cac:  CAC0845
  Cgl:  Cgl2474
  Mtu:  Rv3841
  MtC:  MT3949
  Sau:  SA1709
  Bha:  BH1124
  Eco:  ftn ftnB
  EcZ:  Zftn ZyecI
  Ecs:  ECs2610 ECs2613
  Ype:  YPO1783
  Sty:  STM1932 STM1935
  Vch:  VC0078
  Hin:  HI1384 HI1385
  Pmu:  PM0666 PM0667
  Hpy:  HP0653
  jHp:  jhp0598
  Cje:  Cj0612c
  Uur:  UU427
_______

[C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
  Pya:  PAE1935 PAE2478
  Sso:  SSO1209 SSO2091 SSO2150 SSO2639 SSO2760 SSO2942 SSO3009
        SSO3239
  Ape:  APE0708 APE2216
  Aae:  aq_227
  Dra:  DRA0231 DRA0237
  Mtu:  Rv0373c
  MtC:  MT0388
  Bsu:  BS_yurC
  Bha:  BH0748 BH1977_1
  Eco:  yagR ygeS ygfN_2
  EcZ:  Z4205 Z4220_2 ZyagR
  Ecs:  ECs0314 ECs3739 ECs3754_2
  Pae:  PA1601 PA1880 PA1933 PA2378 PA4621
  Rso:  RSc0627 RSc1468 RSc1889 RSp0325
  Atu:  AGpA739
  Sme:  SMa1488 SMa2037 SMa2353 SMb20132 SMb20342 SMb20395 SMb20404
        SMb21339 SMb21340 SMb21556 SMc03102
  Mlo:  mll1128 mll2287 mll3836 mll4880 mlr1703m mlr1927 mlr7702
  Ccr:  CC0021 CC2269
  Tpa:  TP0079
_______

[J] COG1530 Ribonucleases G and E
  Hbs:  VNG2627C
  Mka:  MK0499
  Pho:  PH0117
  Pab:  PAB0071
  Pya:  PAE0030
  Sso:  SSO1093
  Ape:  APE2336
  Aae:  aq_1275
  Tma:  TM1606
  Fnu:  FN0154
  Cac:  CAC1256
  Cgl:  Cgl2313
  Mtu:  Rv2444c
  MtC:  MT2520
  Mle:  ML1468
  Lin:  lin1578
  Bha:  BH3014
  Syn:  slr1129
  Nos:  alr4331
  Eco:  cafA rne
  EcZ:  ZcafA Zrne
  Ecs:  ECs1462 ECs4119
  Ype:  YPO1590 YPO3669
  Sty:  STM1185 STM3370
  Buc:  BU347
  Vch:  VC0419 VC2030
  Pae:  PA2976 PA4477
  Hin:  HI0413 HI1353
  Pmu:  PM0342 PM0991
  Xfa:  XF1125 XF2607
  Nme:  NMB0196 NMB1791
  NmA:  NMA0071 NMA0672
  Rso:  RSc1040 RSc2197
  Atu:  AGc2469
  Sme:  SMc01336
  Bme:  BMEI1057
  Mlo:  mll0212
  Ccr:  CC1877 CC2341
  Rpr:  RP256
  Rco:  RC0342
  Ctr:  CT808
  Cpn:  CPn0959
_______

[S] COG1531 Uncharacterized protein conserved in archaea
  Afu:  AF0420
  Mth:  MTH1281
  Mja:  MJ1316
  Mka:  MK0350
  Pab:  PAB3259
  Pya:  PAE2518
  Sso:  SSO2687
  Ape:  APE0939
_______

[R] COG1532 Predicted RNA-binding protein
  Afu:  AF1733
  Mth:  MTH1128
  Mja:  MJ1551
  Mka:  MK0734
_______

[L] COG1533 DNA repair photolyase
  Afu:  AF0902 AF1583 AF1589
  Mac:  MA0795
  Mja:  MJ0683
  Mka:  MK1651
  Tac:  Ta1381
  Pho:  PH1468
  Pab:  PAB0414 PAB0476
  Pya:  PAE1082 PAE2153 PAE2508
  Sso:  SSO2744
  Ape:  APE0932 APE1326 APE2577
  Tma:  TM0117
  Fnu:  FN0898_2
  Cac:  CAC0699 CAC2900 CAC3492
  Mtu:  Rv2578c
  MtC:  MT2655
  Bsu:  BS_splB
  Bha:  BH2218 BH2808
  Syn:  slr0285
  Pae:  PA0069
  Rso:  RSc0928
  Atu:  AGc1309
  Sme:  SMc00866
  Bme:  BMEI1541
  Mlo:  mll7417
  Ccr:  CC1330
  Rco:  RC0470
_______

[J] COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein
  Afu:  AF2070
  Hbs:  VNG0601H
  Mac:  MA0192
  Mth:  MTH1617
  Mja:  MJ0652
  Mka:  MK1621
  Pho:  PH1323
  Pab:  PAB1812
  Sso:  SSO10051
  Ape:  APE1091
  Fnu:  FN1209
  Cac:  CAC1261
  Lla:  L26054
  Spy:  SPy0307
  Spn:  SP1748
  Sau:  SA1423
  Lin:  lin1524
  Bsu:  BS_yqeI
  Bha:  BH1325
  Eco:  yhbY
  EcZ:  ZyhbY
  Ecs:  ECs4059
  Ype:  YPO3504
  Sty:  STM3298
  Vch:  VC0635
  Pae:  PA4753
  Hin:  HI1333
  Pmu:  PM0713
  Xfa:  XF0095
  Nme:  NMB0800
  NmA:  NMA1009
  Rso:  RSc1524
_______

[Q] COG1535 Isochorismate hydrolase
  Tma:  TM0133
  Bsu:  BS_dhbB_1
  Eco:  entB_1
  EcZ:  ZentB_1
  Ecs:  ECs0634_1
  Sty:  STM0597_1
  Vch:  VC0771_1
  Pae:  PA1902 PA4213
  Bme:  BMEII0079_1
_______

[N] COG1536 Flagellar motor switch protein
  Aae:  aq_653
  Tma:  TM0220
  Cac:  CAC2161
  Lin:  lin0722
  Bsu:  BS_fliG
  Bha:  BH2457
  Eco:  fliG
  EcZ:  ZfliG
  Ecs:  ECs2678
  Ype:  YPO0715 YPO1829
  Sty:  STM1970
  Buc:  BU074
  Vch:  VC2132
  Pae:  PA1102
  Rso:  RSp0391
  Hpy:  HP0352
  jHp:  jhp0326
  Cje:  Cj0319
  Atu:  AGc989
  Sme:  SMc03019
  Bme:  BMEII1113
  Mlo:  mll2901
  Ccr:  CC0906
  Ctr:  CT719
  Cpn:  CPn0860
  Tpa:  TP0026 TP0400
  Bbu:  BB0221 BB0290
_______

[R] COG1537 Predicted RNA-binding proteins
  Afu:  AF0837
  Hbs:  VNG1506G
  Mac:  MA0652
  Mth:  MTH1642
  Mja:  MJ0174
  Mka:  MK0038
  Tac:  Ta1098
  Tvo:  TVN0463
  Pho:  PH1479
  Pab:  PAB0468
  Pya:  PAE3287
  Sso:  SSO0083
  Ape:  APE1800
  Sce:  YCL001w-a YCL001w-b YNL001w
  Spo:  SPCC18B5.06
  Ecu:  ECU03g1380
_______

[MU] COG1538 Outer membrane protein
  Aae:  aq_1059 aq_1093 aq_1133 aq_1332 aq_699
  Fnu:  FN0517 FN1273
  Syn:  slr1270
  Nos:  alr2887_2
  Eco:  tolC yjcP ylcB yohG yohH
  EcZ:  Z0608 Z2504 Z2506 ZtolC ZyjcP ZylcB ZyohG
  Ecs:  ECs0540 ECs0610 ECs1865 ECs3025 ECs3923 ECs5062
  Ype:  YPO0617 YPO0663 YPO3481
  Sty:  STM0350 STM2172 STM2690 STM3186 STM4259
  Vch:  VC1409 VC1565 VC1606 VC1621 VC2436
  Pae:  PA0427 PA1238 PA1248 PA1875 PA2391 PA2495 PA2522
        PA2525 PA2837 PA3404 PA3521 PA3894 PA4144 PA4208
        PA4592 PA4597 PA4974 PA5158
  Hin:  HI1340_3 HI1462
  Pmu:  PM0527 PM1980
  Xfa:  XF2586
  Nme:  NMB1714 NMB1737
  NmA:  NMA1968 NMA1994
  Rso:  RSc0009 RSc0166 RSc0695 RSc1294 RSc1854 RSc3202 RSc3208
        RSp0290 RSp0311 RSp0442 RSp0491 RSp0528 RSp0669 RSp0817
        RSp1039 RSp1114 RSp1181 RSp1200 RSp1456 RSp1462 RSp1599
  Hpy:  HP0605 HP1489
  jHp:  jhp0552 jhp1382
  Cje:  Cj0365c Cj0608 Cj1031
  Atu:  AGc4622 AGl1720
  Sme:  SMa1037 SMc02082 SMc02281
  Bme:  BMEI1029
  Mlo:  mll1107
  Ccr:  CC0806 CC1015 CC1318 CC1785 CC2388 CC2721 CC3195
  Rpr:  RP224
  Rco:  RC0306 RC0572 RC0573
_______

[H] COG1539 Dihydroneopterin aldolase
  Sce:  YNL256w_1
  Spo:  SPBC1734.03_1
  Fnu:  FN0072_1
  Dra:  DR0169
  Cac:  CAC2927_1
  Cgl:  Cgl2637
  Mtu:  Rv3607c
  MtC:  MT3712.1
  Mle:  ML0225
  Lla:  L165490
  Spy:  SPy1099
  Spn:  SP0292_1
  Sau:  SA0473
  Lin:  lin0257
  Bsu:  BS_folA
  Bha:  BH0094
  Syn:  slr1626
  Nos:  alr3512
  Eco:  folB folX
  EcZ:  ZfolX ZygiG
  Ecs:  ECs3187 ECs3941
  Ype:  YPO0648
  Sty:  STM3206
  Vch:  VC0524
  Pae:  PA0582 PA3439
  Hin:  HI0265
  Pmu:  PM1697
  Xfa:  XF0436
  Nme:  NMB1063
  NmA:  NMA1262
  Rso:  RSc0157 RSc1105 RSp0050
  Hpy:  HP1510
  jHp:  jhp1403
  Cje:  Cj0356c
  Atu:  AGc2498
  Sme:  SMc00463
  Bme:  BMEI0955
  Mlo:  mll0787
  Ccr:  CC0416
  Ctr:  CT614
  Cpn:  CPn0757
_______

[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B
  Pho:  PH0986
  Pab:  PAB2445
  Fnu:  FN0439
  Dra:  DRA0284
  Cgl:  Cgl0977
  Mle:  ML0333
  Sau:  SA1433
  Bsu:  BS_ycsF
  Bha:  BH1821
  Eco:  ybgL
  EcZ:  ZybgL
  Ecs:  ECs0738
  Ype:  YPO2700
  Sty:  STM0714
  Vch:  VCA0776
  Pae:  PA0492 PA2112 PA4511
  Hin:  HI1729m
  Nme:  NMB0228
  NmA:  NMA0030
  Rso:  RSc2169 RSp0936
  Cje:  Cj1541
  Atu:  AGl1172 AGl1871
_______

[H] COG1541 Coenzyme F390 synthetase
  Afu:  AF1070 AF1671 AF2013
  Mac:  MA1063 MA1725 MA2244 MA3853 MA4074
  Mth:  MTH1528 MTH161 MTH1855
  Sso:  SSO10784 SSO1595 SSO2627
  Fnu:  FN1849
  Dra:  DRA0256
  Bha:  BH0195
  Nos:  all2410
  Eco:  paaK
  Ype:  YPO1981
  Vch:  VC0924
  Xfa:  XF1916
  Rso:  RSc2875
_______

[S] COG1542 Uncharacterized conserved protein
  Mja:  MJ1355
  Mka:  MK0041
  Aae:  aq_752
  Tma:  TM1014
_______

[S] COG1543 Uncharacterized conserved protein
  Pho:  PH0368 PH1386
  Pab:  PAB1857
  Cac:  CAC2414
  Mtu:  Rv3031
  MtC:  MT3115
  Mle:  ML1714
  Bha:  BH1415_1
  Syn:  sll0735
  Nos:  alr2450
  Tpa:  TP0358
_______

[J] COG1544 Ribosome-associated protein Y (PSrp-1)
  Aae:  aq_1603
  Tma:  TM1607
  Fnu:  FN0461
  Dra:  DR1082
  Cac:  CAC2847
  Cgl:  Cgl0734
  Mtu:  Rv3241c
  MtC:  MT3339
  Mle:  ML0778
  Lla:  L32389
  Spy:  SPy1613
  Spn:  SP2206
  Sau:  SA0707
  Lin:  lin2655
  Bsu:  BS_yvyD
  Bha:  BH3608
  Syn:  sll0947
  Nos:  all3184
  Eco:  yfiA yhbH
  EcZ:  ZyfiA ZyhbH
  Ecs:  ECs3460 ECs4082
  Ype:  YPO3279
  Sty:  STM2665 STM3321
  Vch:  VC0706 VC2530
  Pae:  PA4463
  Hin:  HI0257
  Pmu:  PM0092
  Xfa:  XF1407
  Rso:  RSc0407
  Atu:  AGc579
  Sme:  SMc01140
  Bme:  BMEI1787
  Mlo:  mll3195
  Ccr:  CC3597
  Rpr:  RP517
  Rco:  RC0634
  Cpn:  CPn0587
  Bbu:  BB0449
_______

[R] COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon
  Afu:  AF0019 AF0033_2 AF0132 AF0135 AF0203 AF0284 AF0437
        AF0965 AF0966 AF1292 AF2417
  Hbs:  VNG0676C VNG0932C
  Mac:  MA4043
  Mth:  MTH1398
  Mja:  MJ1552
  Mka:  MK1377
  Tac:  Ta0031 Ta0352 Ta1457
  Tvo:  TVN0068 TVN0132 TVN1259
  Pho:  PH0675
  Pab:  PAB0908
  Pya:  PAE1375 PAE2184 PAE2472 PAE2489 PAE2490
  Sso:  SSO0532 SSO2063 SSO2064 SSO2509 SSO2626 SSO2872 SSO3112
  Ape:  APE0930 APE1871 APE2389 APE2390
  Mtu:  Rv1628c Rv3521 Rv3542c
  MtC:  MT1664 MT3622 MT3646
  Ccr:  CC1431_2
_______

[R] COG1546 Uncharacterized protein (competence- and mitomycin-induced)
  Hbs:  VNG0368C
  Aae:  aq_1996
  Tma:  TM0703_2
  Fnu:  FN1929_2
  Dra:  DR2338_2
  Cac:  CAC3586_2
  Cgl:  Cgl1918
  Mtu:  Rv1901_2
  MtC:  MT1952_2
  Mle:  ML2015_2
  Spy:  SPy2117_2
  Spn:  SP1941_2
  Lin:  lin1434_2
  Bsu:  BS_cinA_2
  Bha:  BH2385_2
  Syn:  slr0427_2
  Nos:  alr4808_2
  Eco:  ydeJ ygaD
  EcZ:  ZydeJ ZygaD
  Ecs:  ECs2146 ECs3557
  Ype:  YPO3308
  Sty:  STM1514 STM2830
  Vch:  VC0542
  Pae:  PA2141 PA3618
  Xfa:  XF0086
  Nme:  NMB0043
  NmA:  NMA0289
  Rso:  RSc2770
  Hpy:  HP0952
  jHp:  jhp0886
  Cje:  Cj1062_2
  Atu:  AGc2658
  Sme:  SMc01039
  Bme:  BMEI0862
  Mlo:  mll0394
  Ccr:  CC1737 CC2099
  Uur:  UU083
  Mpu:  MYPU_3270
  Mpn:  MPN254
  Mge:  MG115
_______

[S] COG1547 Uncharacterized conserved protein
  Hbs:  VNG1402H
  Tac:  Ta1375
  Tvo:  TVN1421
  Pya:  PAE2960
  Sso:  SSO0652
  Ape:  APE1690
  Aae:  aq_591
  Dra:  DR0943
  Sau:  SA1327
  Bsu:  BS_ypuF
  Bha:  BH1559
  Syn:  slr1636
  Nos:  alr4066
_______

[KG] COG1548 Predicted transcriptional regulator/sugar kinase
  Afu:  AF0479
  Mac:  MA1474
  Mth:  MTH834
  Mja:  MJ0840
  Mka:  MK0113
_______

[J] COG1549 Queuine tRNA-ribosyltransferases, contain PUA domain
  Afu:  AF0587
  Hbs:  VNG1957G
  Mac:  MA0927 MA4632
  Mth:  MTH1665
  Mja:  MJ1022
  Mka:  MK1084
  Tac:  Ta0924
  Tvo:  TVN1069
  Pho:  PH0135
  Pab:  PAB0082
  Sso:  SSO2201
_______

[S] COG1550 Uncharacterized protein conserved in bacteria
  Tma:  TM1649
  Dra:  DR1478
  Cac:  CAC0740
  Mtu:  Rv2117
  MtC:  MT2177
  Mle:  ML1314
  Lin:  lin1363
  Bsu:  BS_ylxP
  Bha:  BH2412
_______

[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)
  Tma:  TM0251
  Cac:  CAC2209
  Bsu:  BS_csrA
  Bha:  BH3617
  Eco:  csrA
  EcZ:  ZcsrA
  Ecs:  ECs3553
  Ype:  YPO3304
  Sty:  STM2826
  Buc:  BU404
  Vch:  VC0548
  Pae:  PA0905
  Hin:  HI0813
  Pmu:  PM1288
  Xfa:  XF0125
  Hpy:  HP1442
  jHp:  jhp1335
  Cje:  Cj1103
  Tpa:  TP0657
  Bbu:  BB0184
_______

[J] COG1552 Ribosomal protein L40E
  Afu:  AF1430
  Hbs:  VNG2076G
  Mac:  MA3970
  Mth:  MTH553
  Mja:  MJ0707
  Mka:  MK0641
  Tac:  Ta1317a
  Tvo:  TVN0267
  Pho:  PHS037
  Pab:  PAB7211
  Pya:  PAE3255
  Sso:  SSO5336
  Ape:  APES002
  Sce:  YIL148w_2 YKR094c_2
  Spo:  SPAC11G7.04_2 SPAC1805.12c_2
  Ecu:  ECU07g1380_2
_______

[P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction
  Mac:  MA3926
  Mth:  MTH1357
  Mja:  MJ0989
  Mka:  MK0008
  Tma:  TM0981
  Eco:  ychN yheN
  EcZ:  ZychN ZyheN
  Ecs:  ECs1724 ECs4196
  Ype:  YPO0197 YPO3130
  Sty:  STM1769 STM3451
  Buc:  BU532
  Vch:  VC0356
  Pae:  PA2605
  Hin:  HI0576
  Pmu:  PM0515 PM1351
_______

[G] COG1554 Trehalose and maltose hydrolases (possible phosphorylases)
  Pho:  PH0746
  Sce:  YPR026w
  Cac:  CAC2685
  Mtu:  Rv2006_3 Rv3401
  MtC:  MT2062_3 MT3509
  Mle:  ML0392
  Lla:  L128690 L39593
  Lin:  lin2226 lin2966
  Bsu:  BS_yvdK
  Nos:  all1058_1 all4989
  Eco:  ycjT
  EcZ:  ZycjT
  Ecs:  ECs1895
  Nme:  NMB0390
  NmA:  NMA2094 NMA2098
  Mpu:  MYPU_6340
_______

[L] COG1555 DNA uptake protein and related DNA-binding proteins
  Mac:  MA2307
  Tma:  TM1052
  Fnu:  FN1611
  Dra:  DR1855
  Cac:  CAC1268
  Cgl:  Cgl2297
  Mtu:  Rv2415c
  MtC:  MT2488
  Lla:  L0316
  Spy:  SPy1409
  Spn:  SP0954
  Sau:  SA1418
  Lin:  lin0944_2 lin1519
  Bsu:  BS_comEA
  Bha:  BH1333
  Syn:  sll1386 slr0197_2
  Nos:  all2976 all3087_2
  Eco:  ybaV
  EcZ:  ZybaV
  Ecs:  ECs0496
  Ype:  YPO3152
  Sty:  STM0453
  Vch:  VC1917
  Pae:  PA3140
  Hin:  HI1008
  Pmu:  PM1665
  Xfa:  XF0593
  Nme:  NMB0057 NMB0299 NMB1657 NMB2017
  NmA:  NMA0211 NMA0423 NMA1915 NMA2187
  Rso:  RSc0916
  Cje:  Cj0011c
_______

[S] COG1556 Uncharacterized conserved protein
  Afu:  AF0810
  Hbs:  VNG6381H
  Fnu:  FN1539
  Dra:  DR1909
  Lla:  L176579
  Bsu:  BS_yvbY
  Bha:  BH1834
  Eco:  ykgG
  EcZ:  ZykgG
  Ecs:  ECs0346
  Pmu:  PM1855
  Nme:  NMB1437
  NmA:  NMA1649
  Rso:  RSc1032
  Hpy:  HP0137
  jHp:  jhp0125
  Cje:  Cj0073c
_______

[N] COG1558 Flagellar basal body rod protein
  Aae:  aq_1183
  Tma:  TM1365
  Cac:  CAC2164
  Lin:  lin0719
  Bsu:  BS_flgC
  Bha:  BH2460
  Eco:  flgC
  EcZ:  ZflgC
  Ecs:  ECs1452
  Ype:  YPO0723 YPO1800
  Sty:  STM1175
  Buc:  BU338
  Vch:  VC2199
  Pae:  PA1078
  Rso:  RSp0343
  Hpy:  HP1558
  jHp:  jhp1466
  Cje:  Cj0527c
  Atu:  AGc975
  Sme:  SMc03028
  Bme:  BMEII1088
  Mlo:  mlr2912
  Ccr:  CC0954
  Tpa:  TP0397
  Bbu:  BB0293
_______

[R] COG1559 Predicted periplasmic solute-binding protein
  Aae:  aq_775
  Fnu:  FN1976
  Dra:  DR2552
  Cac:  CAC1685
  Cgl:  Cgl1592
  Mtu:  Rv2553c
  MtC:  MT2630
  Mle:  ML0514
  Lla:  L24228
  Spy:  SPy0348
  Spn:  SP1518
  Lin:  lin1534
  Bsu:  BS_yrrL
  Bha:  BH1271
  Eco:  yceG
  EcZ:  ZyceG
  Ecs:  ECs1475
  Ype:  YPO1604
  Sty:  STM1199
  Vch:  VC2017
  Pae:  PA2963
  Hin:  HI0457
  Pmu:  PM1672
  Xfa:  XF0675
  Nme:  NMB0669
  NmA:  NMA0868
  Rso:  RSc1783
  Hpy:  HP0587
  jHp:  jhp0535
  Cje:  Cj0529c
  Atu:  AGc2034
  Sme:  SMc00575
  Bme:  BMEI1471
  Mlo:  mlr7854
  Ccr:  CC1679
  Rpr:  RP322
  Rco:  RC0442
  Tpa:  TP0491
  Bbu:  BB0709
_______

[M] COG1560 Lauroyl/myristoyl acyltransferase
  Fnu:  FN1016
  Cgl:  Cgl1628
  Mtu:  Rv2611c
  MtC:  MT2686
  Mle:  ML0453
  Eco:  ddg htrB msbB
  EcZ:  Z1690 Zddg ZmsbB
  Ecs:  ECs1432 ECs2565 ECs3258
  Ype:  YPO2063 YPO3632
  Sty:  STM1155 STM1889 STM2401
  Vch:  VC0212 VC0213 VC1577
  Pae:  PA0011 PA3242
  Hin:  HI0199 HI1527
  Pmu:  PM0362 PM0885
  Xfa:  XF0104 XF1348
  Nme:  NMB1418 NMB1801
  NmA:  NMA0662 NMA1630
  Rso:  RSc0135 RSc0136
  Hpy:  HP0280
  jHp:  jhp0265
  Cje:  Cj1134
  Atu:  AGc2930
  Sme:  SMc04268
  Bme:  BMEI1115
  Mlo:  mlr1179
  Ccr:  CC2250
  Rpr:  RP718
  Rco:  RC1091
  Ctr:  CT010
  Cpn:  CPn0098
_______

[S] COG1561 Uncharacterized stress-induced protein
  Aae:  aq_770 aq_771
  Tma:  TM1691
  Fnu:  FN2034
  Cac:  CAC1716
  Lin:  lin1942
  Bsu:  BS_yloC
  Bha:  BH2514
  Eco:  yicC
  EcZ:  ZyicC
  Ecs:  ECs4519
  Ype:  YPO0043
  Sty:  STM3735
  Vch:  VC0209
  Pae:  PA5335
  Hin:  HI0467
  Pmu:  PM1875
  Xfa:  XF1504
  Nme:  NMB0711
  NmA:  NMA0916
  Rso:  RSc2156
  Atu:  AGc2036
  Sme:  SMc00576
  Bme:  BMEI1470
  Mlo:  mlr7856
  Ccr:  CC1680
  Bbu:  BB0818
_______

[I] COG1562 Phytoene/squalene synthetase
  Hbs:  VNG0680G VNG1458G VNG1680G
  Mth:  MTH1808
  Sso:  SSO2905
  Sce:  YHR190w
  Spo:  SPBC646.05c
  Dra:  DR0862
  Cgl:  Cgl0607 Cgl2379
  Mtu:  Rv3397c
  MtC:  MT3505
  Sau:  SA2349
  Bsu:  BS_yisP
  Syn:  sll0513 slr1255
  Nos:  alr1805 alr1833
  Xfa:  XF2469
  Nme:  NMB1130 NMB1168 NMB1521
  NmA:  NMA1339 NMA1721
  Rso:  RSc1652
  Atu:  AGc2873
  Sme:  SMc02055
  Bme:  BMEI1074
  Mlo:  mll1068
  Ccr:  CC1987
_______

[P] COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter
  Mth:  MTH1248
  Mja:  MJ0437
  Pho:  PHS039
  Tma:  TM1109_1 TM1208
  Syn:  slr2011
  Nos:  all1838
  Rpr:  RP267_1
  Rco:  RC0355_1
_______

[H] COG1564 Thiamine pyrophosphokinase
  Sce:  YOR143c
  Spo:  SPAC6F12.05c_2
  Tma:  TM0888
  Fnu:  FN0890
  Dra:  DR0552
  Cac:  CAC1731
  Lla:  L76216
  Spy:  SPy0265
  Spn:  SP1982
  Sau:  SA1066
  Lin:  lin1931
  Bsu:  BS_yloS
  Hpy:  HP1291
  jHp:  jhp1211
  Atu:  AGc4926
  Sme:  SMc03867
  Bme:  BMEI0286
  Mlo:  mlr3869
  Tpa:  TP0518
_______

[S] COG1565 Uncharacterized conserved protein
  Aae:  aq_622
  Syn:  slr0351
  Nos:  alr3357
  Xfa:  XF1458
  Nme:  NMB0409
  NmA:  NMA2076
  Rso:  RSc0155
  Hpy:  HP0812
  jHp:  jhp0748
  Cje:  Cj1236
  Atu:  AGc4024
  Sme:  SMc02682
  Bme:  BMEI0487
  Mlo:  mlr2680
  Ccr:  CC0491
  Rpr:  RP045
  Rco:  RC0071
_______

[V] COG1566 Multidrug resistance efflux pump
  Aae:  aq_1060
  Sau:  SA2143
  Bsu:  BS_yhbJ
  Eco:  emrA emrK ydhJ yhcQ yiaV yibH yjcR
  EcZ:  Z2659 ZemrA ZemrK ZyhcQ ZyiaV ZyibH ZyjcR
  Ecs:  ECs2353 ECs3247 ECs3547 ECs4114 ECs4462 ECs4473 ECs5064
  Ype:  YPO0619 YPO3267 YPO3685
  Sty:  STM1442 STM2814 STM3365
  Vch:  VC1410 VCA0047
  Pae:  PA1231 PA1237 PA2430 PA2836 PA3136 PA3304 PA3360
        PA3892 PA5159
  Hin:  HI0898
  Nme:  NMB0318
  NmA:  NMA2169
  Rso:  RSc1293 RSc1853 RSc2726 RSp0440
  Atu:  AGc2013 AGl783 AGpA806
  Sme:  SMa0669 SMb20699 SMc00564 SMc03168
  Bme:  BMEI0926 BMEII0533 BMEII0793 BMEII1118
  Mlo:  mll0995 mll2590 mlr4818 mlr8231
  Ccr:  CC3714
  Rpr:  RP243
  Rco:  RC0327
_______

[L] COG1567 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Mac:  MA1934
  Mth:  MTH1079
  Mja:  MJ1668
  Tvo:  TVN0109
  Pho:  PH0166
  Tma:  TM1808
  Mtu:  Rv2820c
  MtC:  MT2887
_______

[R] COG1568 Predicted methyltransferases
  Afu:  AF1611
  Mja:  MJ0675 MJ1273
  Pho:  PH0728
  Pab:  PAB0872
  Aae:  aq_1754
_______

[R] COG1569 Predicted nucleic acid-binding protein, contains PIN domain
  Afu:  AF0296
  Mja:  MJ1680
  Pho:  PH0146 PH0469
  Pab:  PAB2325
  Syn:  sll1912 slr1327
  Nos:  all2421 alr4952
  Xfa:  XFa0022
_______

[L] COG1570 Exonuclease VII, large subunit
  Tma:  TM1768
  Fnu:  FN1066
  Dra:  DR0186
  Cac:  CAC2082
  Cgl:  Cgl0996
  Mtu:  Rv1108c
  MtC:  MT1139
  Mle:  ML1940
  Lla:  L0254
  Spy:  SPy1500
  Spn:  SP1207
  Sau:  SA1354
  Lin:  lin1398
  Bsu:  BS_yqiB
  Bha:  BH2783
  Nos:  all1774
  Eco:  xseA
  EcZ:  ZxseA
  Ecs:  ECs3371
  Ype:  YPO2872
  Sty:  STM2512
  Vch:  VC0766
  Pae:  PA3777
  Hin:  HI0397
  Pmu:  PM0168
  Xfa:  XF0755
  Nme:  NMB1363
  NmA:  NMA1575
  Rso:  RSc2527
  Hpy:  HP0259 HP0981
  jHp:  jhp0243
  Cje:  Cj0325
  Atu:  AGc461
  Sme:  SMc00378
  Bme:  BMEII0527
  Mlo:  mll6896
  Ccr:  CC2246
  Rpr:  RP675
  Rco:  RC1026
  Ctr:  CT329
  Cpn:  CPn1062
_______

[R] COG1571 Predicted DNA-binding protein containing a Zn-ribbon domain
  Afu:  AF2259
  Hbs:  VNG2110C
  Mac:  MA1981 MA3525
  Mth:  MTH1391 MTH966
  Mja:  MJ0921 MJ1095
  Mka:  MK0351 MK1003
  Tac:  Ta0545
  Tvo:  TVN0599
  Pho:  PH1812
  Pab:  PAB0247
  Pya:  PAE0933
  Sso:  SSO0258
  Ape:  APE0656
_______

[S] COG1572 Uncharacterized conserved protein
  Afu:  AF1942m AF1946_1
  Mac:  MA0813_1 MA1750 MA1760
  Mth:  MTH714_1
  Pho:  PH0954_1
  Pab:  PAB1790_2
  Nos:  alr1615_1
_______

[L] COG1573 Uracil-DNA glycosylase
  Afu:  AF2277
  Hbs:  VNG0707C VNG1228C VNG2082G
  Mac:  MA2265 MA3593
  Tac:  Ta0477
  Tvo:  TVN0827
  Pho:  PH1472
  Pab:  PAB0474
  Pya:  PAE0651 PAE1327
  Sso:  SSO2275 SSO2733
  Ape:  APE0427
  Aae:  aq_1693
  Tma:  TM0511
  Fnu:  FN0901 FN1259
  Dra:  DR1751
  Cac:  CAC0219 CAC2997
  Mtu:  Rv1259
  MtC:  MT1297.1
  Mle:  ML1105
  Lla:  L68066
  Spy:  SPy0472
  Spn:  SP0624
  Syn:  sll1217
  Nos:  alr3018
  Vch:  VC0266
  Hin:  HI0220.2
  Nme:  NMB1873
  NmA:  NMA0583
  Rso:  RSc1329 RSc1369
  Hpy:  HP0650
  jHp:  jhp0595
  Cje:  Cj0963
  Atu:  AGc1810 AGc3461 AGc3961
  Sme:  SMb21448 SMc02375 SMc04210
  Bme:  BMEI1097 BMEI1299 BMEI1321
  Mlo:  mll0558 mll5147 mll7705 mll7751
  Ccr:  CC1333 CC1549 CC2084 CC2333
  Rpr:  RP845
  Rco:  RC1309
  Tpa:  TP0229
_______

[R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold
  Hbs:  VNG1880C
  Mac:  MA0761 MA2953
  Tac:  Ta0662m
  Tvo:  TVN0914
  Pho:  PH1139
  Pab:  PAB1657
  Ape:  APE2161
  Aae:  aq_1412
  Tma:  TM0330
  Fnu:  FN0648 FN0649
  Dra:  DR2540
  Mtu:  Rv0552 Rv2052c
  MtC:  MT0578 MT2112
  Lin:  lin2448
  Bsu:  BS_ytcJ
  Bha:  BH3200
  Sty:  STM1472
  Pae:  PA2448 PA2699
  Rso:  RSc0239 RSp1459
  Atu:  AGl1745
  Sme:  SMa0101 SMa0380 SMa1819
  Bme:  BMEII0123 BMEII0247
  Mlo:  mll2891
  Ccr:  CC0658
_______

[H] COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase
  Hbs:  VNG1075G
  Tma:  TM1528
  Fnu:  FN1542
  Cgl:  Cgl0443
  Mtu:  Rv0534c
  MtC:  MT0558
  Mle:  ML2406
  Lla:  L112353 L171002 L187450
  Sau:  SA0894
  Lin:  lin1785 lin2784
  Bsu:  BS_ywaB
  Syn:  slr1518
  Nos:  alr0033
  Eco:  menA
  EcZ:  ZmenA
  Ecs:  ECs4857
  Ype:  YPO0104
  Sty:  STM4090
  Vch:  VC2673
  Hin:  HI0509
  Pmu:  PM1169
_______

[S] COG1576 Uncharacterized conserved protein
  Tma:  TM0844
  Fnu:  FN0463
  Dra:  DR0619
  Cac:  CAC3536
  Lla:  L185851
  Spy:  SPy2215
  Spn:  SP2238
  Sau:  SA0023
  Lin:  lin0321
  Bsu:  BS_yydA
  Bha:  BH4007
  Eco:  ybeA
  EcZ:  ZybeA
  Ecs:  ECs0674
  Ype:  YPO2605
  Sty:  STM0641
  Vch:  VC0951
  Pae:  PA4004
  Hin:  HI0033
  Pmu:  PM1923
  Xfa:  XF0338
  Nme:  NMB2022
  NmA:  NMA0418
  Rso:  RSc2195
  Hpy:  HP0949
  jHp:  jhp0883
  Cje:  Cj0126c
  Atu:  AGc5037
  Sme:  SMc03781
  Bme:  BMEI0211
  Mlo:  mll4004
  Ccr:  CC3433
  Uur:  UU180
  Mpu:  MYPU_2540
_______

[I] COG1577 Mevalonate kinase
  Afu:  AF2289
  Hbs:  VNG1145G
  Mac:  MA0602
  Mth:  MTH46
  Mja:  MJ1087
  Mka:  MK0993
  Pho:  PH1625
  Pab:  PAB0372
  Pya:  PAE3108
  Sso:  SSO0383
  Ape:  APE2439
  Sce:  YMR208w
  Spo:  SPAC13G6.11c
  Ecu:  ECU09g1780
  Lla:  L10014 L7866
  Spy:  SPy0876 SPy0878
  Spn:  SP0381 SP0383
  Sau:  SA0547 SA0549
  Lin:  lin0010 lin0012
  Bbu:  BB0688
_______

[S] COG1578 Uncharacterized conserved protein
  Afu:  AF1104
  Mac:  MA3360
  Mth:  MTH1744
  Mja:  MJ0202
  Mka:  MK0812
  Pho:  PH1575
  Pab:  PAB1965
  Pya:  PAE3323
  Aae:  aq_893
  Tma:  TM0176
_______

[R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding
  Aae:  aq_1223
  Dra:  DR0291
  Cac:  CAC1304
  Cgl:  Cgl2187
  Mtu:  Rv2229c
  Mle:  ML1638
  Hpy:  HP0958
  jHp:  jhp0892
  Cje:  Cj0706
  Ctr:  CT398
  Cpn:  CPn0525
  Tpa:  TP0494
  Bbu:  BB0713
_______

[N] COG1580 Flagellar basal body-associated protein
  Aae:  aq_1860
  Tma:  TM0678
  Cac:  CAC2152
  Bsu:  BS_fliL
  Bha:  BH2447
  Eco:  fliL
  EcZ:  ZfliL
  Ecs:  ECs2683
  Ype:  YPO1824
  Sty:  STM1975
  Vch:  VC0097 VC2127
  Pae:  PA1442 PA5233
  Rso:  RSp0379
  Hpy:  HP0809
  jHp:  jhp0745
  Cje:  Cj1408
  Tpa:  TP0378 TP0722
  Bbu:  BB0279
_______

[K] COG1581 Archaeal DNA-binding protein
  Afu:  AF1067 AF1956
  Mth:  MTH1483
  Mja:  MJ0212
  Mka:  MK0715 MK1089
  Tac:  Ta0912
  Tvo:  TVN1058
  Pho:  PHS053
  Pab:  PAB7094
  Pya:  PAE2226
  Sso:  SSO0962 SSO6877
  Ape:  APE1823 APES060
_______

[N] COG1582 Uncharacterized protein, possibly involved in motility
  Tma:  TM0675
  Cac:  CAC2153
  Bsu:  BS_flgEa
  Bha:  BH2448
  Tpa:  TP0726
  Bbu:  BB0282
_______

[L] COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Afu:  AF0072
  Mac:  MA3672
  Mth:  MTH1091
  Mja:  MJ0375 MJ1234
  Tvo:  TVN0113
  Pho:  PH0161 PH0350 PH1252
  Pab:  PAB1064 PAB1613
  Aae:  aq_173 aq_383
  Tma:  TM1814
_______

[S] COG1584 Predicted membrane protein
  Mac:  MA0103 MA4008 MA4393
  Mth:  MTH215
  Tac:  Ta0420
  Tvo:  TVN1151
  Sso:  SSO2864
  Sce:  YCR010c YDR384c YNR002c
  Spo:  SPAC5D6.09c
  Eco:  yaaH
  EcZ:  ZyaaH
  Ecs:  ECs0010
  Ype:  YPO0467
  Sty:  STM0009
  Vch:  VC0770
  Pmu:  PM1452
_______

[OU] COG1585 Membrane protein implicated in regulation of membrane protease activity
  Hbs:  VNG0322H
  Mth:  MTH693
  Mja:  MJ0826
  Mka:  MK0848
  Pho:  PH0471
  Pab:  PAB0371 PAB1325
  Pya:  PAE0840 PAE1105
  Sso:  SSO2193
  Ape:  APE2356
  Tma:  TM0865
  Fnu:  FN1548
  Dra:  DR2142
  Cac:  CAC1051
  Cgl:  Cgl1497
  Mtu:  Rv1487
  MtC:  MT1533.1
  Mle:  ML1803
  Syn:  slr0935
  Nos:  alr2471
  Eco:  ybbJ
  EcZ:  ZybbJ
  Ecs:  ECs0551
  Ype:  YPO3084
  Sty:  STM0500
  Vch:  VC0975
  Pae:  PA5211
  Pmu:  PM0888
  Xfa:  XF0184
  Atu:  AGl2125
  Sme:  SMc04021
  Bme:  BMEII0020
  Mlo:  mlr3022
  Ccr:  CC3374
_______

[E] COG1586 S-adenosylmethionine decarboxylase
  Afu:  AF1610
  Mja:  MJ0315
  Tac:  Ta1196
  Tvo:  TVN0405
  Pho:  PH1992
  Pab:  PAB1162
  Pya:  PAE1490 PAE1749
  Sso:  SSO0536 SSO0585
  Ape:  APE0079 APE0639
  Aae:  aq_254
  Tma:  TM0655
  Cac:  CAC2601
  Bsu:  BS_ytcF
  Bha:  BH1097 BH3148
  Eco:  speD
  EcZ:  ZspeD
  Ecs:  ECs0124
  Ype:  YPO3412
  Sty:  STM0165
  Buc:  BU208
  Pae:  PA0654 PA4773
  Xfa:  XF1539
  Rso:  RSp1293
_______

[H] COG1587 Uroporphyrinogen-III synthase
  Afu:  AF0116
  Hbs:  VNG2332G
  Mac:  MA3034
  Mth:  MTH166
  Mja:  MJ0994
  Mka:  MK1550
  Tac:  Ta0573
  Tvo:  TVN0633
  Pya:  PAE0589 PAE2594
  Sso:  SSO0184
  Sce:  YOR278w
  Spo:  SPAC31G5.08
  Aae:  aq_1771
  Fnu:  FN0644_2
  Dra:  DR0786 DRA0011_2
  Cac:  CAC0098_2
  Cgl:  Cgl0424_2
  Mtu:  Rv0260c_1 Rv0511_2
  MtC:  MT0273_1 MT0532_2
  Mle:  ML2420_2
  Sau:  SA1493
  Lin:  lin1164_2 lin1590
  Bsu:  BS_hemD BS_nasF_2 BS_yjjA
  Bha:  BH1495_2 BH2162 BH3045
  Syn:  sll0166_2
  Nos:  all0287 alr3450_2
  Eco:  hemD
  EcZ:  ZhemD
  Ecs:  ECs4734
  Ype:  YPO3850
  Sty:  STM3937
  Vch:  VC0119
  Pae:  PA5259
  Pmu:  PM1813
  Xfa:  XF1799
  Nme:  NMB0777
  NmA:  NMA0988
  Rso:  RSc2356_1
  Hpy:  HP1224
  jHp:  jhp1145
  Cje:  Cj1080c
  Atu:  AGc4810
  Sme:  SMc03232
  Bme:  BMEI0177
  Mlo:  mll4221
  Ctr:  CT433
  Cpn:  CPn0522
_______

[J] COG1588 RNase P/RNase MRP subunit p29
  Afu:  AF1917
  Hbs:  VNG1699C
  Mac:  MA1080
  Mth:  MTH11
  Mja:  MJ0464
  Mka:  MK0846 MK1216
  Tac:  Ta1263a
  Tvo:  TVN0333
  Pho:  PH1771
  Pab:  PAB2126
  Ape:  APE0362
_______

[M] COG1589 Cell division septal protein
  Dra:  DR0629
  Cac:  CAC2125
  Cgl:  Cgl2106
  Mtu:  Rv2151c
  MtC:  MT2210
  Mle:  ML0916
  Lla:  L0209
  Spy:  SPy1523
  Spn:  SP0690
  Sau:  SA1027
  Lin:  lin2140
  Bsu:  BS_divIB
  Bha:  BH2563
  Syn:  sll1632
  Nos:  alr3857
  Eco:  ftsQ
  EcZ:  ZftsQ
  Ecs:  ECs0097
  Ype:  YPO0558
  Sty:  STM0131
  Vch:  VC2399
  Pae:  PA4409
  Hin:  HI1141
  Pmu:  PM0145
  Xfa:  XF0800
  Nme:  NMB0425
  NmA:  NMA2059
  Rso:  RSc2841
  Atu:  AGc3786
  Sme:  SMc01872
  Bme:  BMEI0583
  Mlo:  mll1550
  Ccr:  CC2542
  Rpr:  RP250
  Rco:  RC0334
  Tpa:  TP0388
  Bbu:  BB0301
_______

[S] COG1590 Uncharacterized conserved protein
  Afu:  AF2059
  Mja:  MJ1510
  Mka:  MK0048
  Pho:  PH1069 PH1887
  Pab:  PAB0615 PAB2159
  Pya:  PAE2913
  Sso:  SSO0622
  Ape:  APE0816
  Sce:  YGL050w
  Spo:  SPAC25B8.15c
_______

[L] COG1591 Holliday junction resolvase - archaeal type
  Afu:  AF1965
  Hbs:  VNG2252G
  Mth:  MTH1270
  Mja:  MJ0497
  Mka:  MK0102
  Pho:  PH1328
  Pab:  PAB0552
  Pya:  PAE2162
  Sso:  SSO0575 SSO1176
  Ape:  APE0461
_______

[C] COG1592 Rubrerythrin
  Afu:  AF0342 AF0831 AF0832 AF1640 AF2312
  Mac:  MA0639 MA0684 MA1157 MA1659_2
  Mth:  MTH1351 MTH1578_2 MTH756 MTH822
  Mja:  MJ0734 MJ0746
  Mka:  MK0532 MK1249
  Pab:  PAB0598
  Sso:  SSO2642
  Tma:  TM0657
  Fnu:  FN0455
  Cac:  CAC2575 CAC3018 CAC3597 CAC3598
  Bsu:  BS_yotD
  Nos:  alr1174
  Cje:  Cj0012c
_______

[G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
  Tma:  TM0324
  Fnu:  FN0939 FN1256 FN1473_2
  Cgl:  Cgl2266 Cgl2287
  Bha:  BH0703 BH2671 BH3391
  Eco:  yiaN
  Ype:  YPO1577
  Sty:  STM3171 STM3672 STM4052
  Vch:  VC1777 VC1927
  Pae:  PA0886 PA3781 PA5169
  Hin:  HI0050m HI0147_2 HI1029
  Pmu:  PM0273 PM1253 PM1527 PM1642 PM1653 PM1708_2
  Atu:  AGc4974 AGl113_2 AGl3113_2 AGl3123 AGl3309 AGl3348
  Sme:  SMa0151 SMa0250 SMb20035 SMb20297 SMb20321 SMb20372 SMb20444
        SMb20979 SMb21351 SMb21436 SMc00266_2 SMc00273
  Ccr:  CC1448
  Tpa:  TP0958
_______

[K] COG1594 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS
  Afu:  AF1235
  Hbs:  VNG0426G VNG1743C
  Mac:  MA0112
  Mth:  MTH1314
  Mja:  MJ1148
  Tac:  Ta1006
  Tvo:  TVN0742
  Pho:  PH0664
  Pab:  PAB1464
  Pya:  PAE3040 PAE3480
  Sso:  SSO0291 SSO0605 SSO9221
  Ape:  APE0442 APES041
  Sce:  YDR045c YGL043w YGL070c YJR063w
  Spo:  SPAC20H4.03c SPAC22A12.05 SPAPYUG7.04c SPCC1259.03
  Ecu:  ECU03g0490 ECU04g0180 ECU08g1330 ECU11g1400
_______

[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
  Tma:  TM0534 TM1598
  Fnu:  FN0479 FN1518
  Dra:  DR0180 DR0804
  Cac:  CAC1509 CAC1766 CAC3152 CAC3267 CAP0167
  Cgl:  Cgl0255 Cgl0584 Cgl0743 Cgl1096 Cgl3029
  Mtu:  Rv0182c Rv0445c Rv0735 Rv1189 Rv1221 Rv2069 Rv3223c
        Rv3328c Rv3414c Rv3911
  MtC:  MT0191 MT0461 MT0759 MT1226 MT1259 MT2129 MT3320
        MT3431 MT3523 MT4030
  Mle:  ML1076 ML1448
  Lla:  L0142
  Sau:  SA0492 SA1595
  Lin:  lin0275 lin0443 lin2397
  Bsu:  BS_sigH BS_sigV BS_sigW BS_sigX BS_sigY BS_sigZ BS_xpf
        BS_yhdM BS_ylaC
  Bha:  BH0115 BH0263 BH0620 BH0672 BH1615 BH2026 BH3117
        BH3216 BH3223 BH3362 BH3632 BH3882
  Syn:  sll0687 sll0856 slr1545
  Nos:  all2193 alr3280
  Eco:  fecI rpoE
  EcZ:  ZrpoE
  Ecs:  ECs3439
  Ype:  YPO2711
  Sty:  STM2640
  Vch:  VC1045 VC2302 VC2467
  Pae:  PA0149 PA0472 PA0675 PA0762 PA1300 PA1363 PA1776
        PA1912 PA2050 PA2093 PA2387 PA2426 PA2468 PA2896
        PA3285 PA3410 PA3899 PA4896
  Hin:  HI0628 HI1459
  Pmu:  PM0209 PM1789
  Xfa:  XF2239
  Nme:  NMB2144
  NmA:  NMA0230
  Rso:  RSc0034 RSc1055 RSc2078 RSc2361 RSc2918 RSc2983 RSp0415
        RSp0849 RSp1651
  Atu:  AGc2739 AGc3605 AGc3679 AGc4121 AGc838 AGl1384_1 AGl1386
        AGl2290 AGl2869 AGl3451 AGpA407 AGpA442 AGpA720
  Sme:  SMa0143 SMb20030 SMb20531 SMb20592 SMb21484 SMc00794_1 SMc01419
        SMc01504_1 SMc01506 SMc02713 SMc04051 SMc04203
  Bme:  BMEI0371 BMEI0372_1 BMEII0072_1
  Mlo:  mll1224 mll1867 mll2270 mll3493 mll3697 mll4824 mll5118
        mll5456 mll6869 mll8140 mlr0407 mlr1481 mlr2184 mlr3807
        mlr7773 mlr8088
  Ccr:  CC0561 CC0648 CC0981 CC1129 CC1646 CC1649 CC2707
        CC2751 CC2883 CC3253 CC3266 CC3310 CC3475 CC3477_1
  Tpa:  TP0092
_______

[M] COG1596 Periplasmic protein involved in polysaccharide export
  Aae:  aq_504 aq_505
  Tma:  TM0638
  Syn:  sll1581
  Nos:  all0495 all4388 alr2294
  Eco:  wza yccZ
  EcZ:  Zwza ZyccZ
  Ecs:  ECs1139 ECs2867
  Sty:  STM2118
  Vch:  VC0936
  Pae:  PA2234
  Pmu:  PM0778 PM1016
  Xfa:  XF2370
  Nme:  NMB0071
  NmA:  NMA0198
  Rso:  RSp1020
  Cje:  Cj1444c
  Atu:  AGc2283 AGl1067 AGl177_1 AGl2992_1 AGl3092
  Sme:  SMa0364_1 SMb20945_1 SMb21073_1 SMb21245_1 SMc01794 SMc02274
  Bme:  BMEI1175 BMEII0851_1
  Mlo:  mll5251_1 mll8437 mlr6769_1
  Ccr:  CC0169 CC2432
_______

[IR] COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
  Tac:  Ta1460
  Sce:  YLR260w YOR171c
  Spo:  SPAC4A8.07c
  Tma:  TM0358
  Dra:  DR1363 DR1560 DR2234
  Cac:  CAC0679
  Cgl:  Cgl2524
  Mtu:  Rv2252 Rv3218
  MtC:  MT3314
  Lla:  L178172 L26628 L39484
  Spy:  SPy0752 SPy1158
  Spn:  SP1045
  Sau:  SA0681 SA1714
  Lin:  lin0768 lin1865 lin2702
  Bsu:  BS_bmrU BS_yerQ BS_ytlR
  Bha:  BH0676 BH1774 BH1953
  Syn:  sll0036_2
  Nos:  all1876 alr2881
  Eco:  yegS
  EcZ:  Z3252
  Ecs:  ECs2892
  Ype:  YPO2856
  Sty:  STM2140
  Pae:  PA3023
  Atu:  AGc1840
  Sme:  SMc02382
  Mlo:  mll2607 mll8080 mll9677 mlr3686
  Ccr:  CC3555
_______

[S] COG1598 Uncharacterized conserved protein
  Afu:  AF1072
  Hbs:  VNG0037H
  Mac:  MA0764 MA1600 MA2134 MA2136 MA2367 MA3422 MA3423
        MA3425 MA4125
  Mth:  MTH321
  Tac:  Ta0767
  Tma:  TM1313 TM1321
  Spn:  SP1786
  Syn:  slr1999_2 ssl0259 ssl0350 ssl0738 ssr0336 ssr1258 ssr1765
        ssr2067
  Nos:  asl1825 asl2437 asl2713 asl4361 asr4594
  Eco:  ydcQ
  EcZ:  Z2281
  Ecs:  ECs2042
  Ype:  YPO1817 YPO2973 YPO3369
  NmA:  NMA1215
  jHp:  jhp0960
  Sme:  SMc02313 SMc04269
  Mlo:  mlr2150
  Ccr:  CC2869 CC3185
  Rco:  RC1071_1
_______

[L] COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
  Afu:  AF0382 AF0780
  Hbs:  VNG0133G VNG1255C VNG2160C VNG6403H VNG7134
  Mac:  MA0590 MA3019 MA4645
  Mth:  MTH1384 MTH1385
  Mja:  MJ1159
  Mka:  MK1441
  Tac:  Ta0387 Ta1149
  Tvo:  TVN1185 TVN1236
  Pho:  PH1893
  Pab:  PAB2163
  Sso:  SSO2364
  Ape:  APE1323
  Sce:  YAR007c
  Spo:  SPBC660.13c
  Ecu:  ECU01g0880 ECU10g0600
_______

[C] COG1600 Uncharacterized Fe-S protein
  Afu:  AF2409
  Mac:  MA0331 MA0667 MA1708 MA2755 MA3660 MA4249 MA4319
  Mth:  MTH221
  Dra:  DR1453
  Cac:  CAP0077
  Spy:  SPy0642
  Sau:  SA1673
  Lin:  lin0933
  Bsu:  BS_yhbA
  Bha:  BH1020
  Syn:  sll1348
  Nos:  alr4943
  Eco:  yjeS
  EcZ:  ZyjeS
  Ecs:  ECs5143
  Ype:  YPO0367
  Sty:  STM4355
  Vch:  VC0342
  Pae:  PA4950
  Rso:  RSc2541
  Atu:  AGc502
  Sme:  SMc00406
  Bme:  BMEII0255
  Mlo:  mlr4636
  Ccr:  CC3638
_______

[J] COG1601 Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain
  Afu:  AF2326
  Hbs:  VNG1262G
  Mac:  MA0182_1
  Mth:  MTH1769
  Mja:  MJ0097
  Mka:  MK0967
  Tac:  Ta0605_1
  Tvo:  TVN0655_1
  Pho:  PH0605
  Pab:  PAB0959
  Pya:  PAE1373
  Sso:  SSO2381
  Ape:  APE1533
  Sce:  YPL237w YPR041w
  Spo:  SPAC2F7.05c SPAC6B12.17c
  Ecu:  ECU06g0210 ECU07g1330
_______

[S] COG1602 Uncharacterized conserved protein
  Afu:  AF1346m AF1347m AF1590
  Hbs:  VNG0351C
  Mac:  MA4061
  Mth:  MTH718 MTH720
  Mka:  MK0040
  Tac:  Ta1380
  Tvo:  TVN0302
  Pho:  PH1856
  Pab:  PAB2062
  Pya:  PAE1269 PAE2419
  Sso:  SSO0872 SSO2743
  Ape:  APE1998
_______

[J] COG1603 RNase P/RNase MRP subunit p30
  Afu:  AF2317
  Hbs:  VNG1281H
  Mac:  MA1782
  Mth:  MTH688
  Mja:  MJ1139
  Mka:  MK0387
  Pho:  PH1877
  Pab:  PAB1136
  Sso:  SSO0740
  Ape:  APE1450
  Sce:  YHR062c
  Spo:  SPAC3A12.04c
_______

[L] COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Afu:  AF1861
  Mka:  MK1296_2
  Sso:  SSO1510 SSO1990
  Aae:  aq_380
  Tma:  TM1791
  Bha:  BH0332
_______

[E] COG1605 Chorismate mutase
  Afu:  AF0227_2
  Hbs:  VNG1244C
  Mac:  MA1377
  Mth:  MTH804
  Mja:  MJ0246
  Mka:  MK1609
  Tac:  Ta0245m
  Tvo:  TVN1349
  Pya:  PAE1960_2
  Sso:  SSO0302_1
  Ape:  APE0563a
  Sce:  YPR060c
  Spo:  SPAC16E8.04c
  Aae:  aq_951_1
  Tma:  TM0155_1
  Fnu:  FN0044
  Dra:  DR1001_1
  Cac:  CAC0897_1
  Cgl:  Cgl0830
  Mtu:  Rv0948c Rv1885c
  MtC:  MT0975 MT1933
  Mle:  ML0151
  Lla:  L64445
  Spy:  SPy0722
  Spn:  SP1296
  Sau:  SA1558_1
  Lin:  lin1641_1
  Bsu:  BS_aroA_1
  Bha:  BH3242_1
  Eco:  pheA_1 tyrA_1
  EcZ:  ZpheA_1 ZtyrA_1
  Ecs:  ECs3462_1 ECs3463_1
  Ype:  YPO1353 YPO3285_1
  Sty:  STM1269 STM2667_1 STM2669_1
  Buc:  BU392_1
  Vch:  VC0696_1 VC0705_1
  Pae:  PA3166_1 PA4230 PA5184
  Hin:  HI1145_1 HI1290_1
  Pmu:  PM0150_1 PM0664_1
  Xfa:  XF1141 XF2325_1
  Nme:  NMB0446_1
  NmA:  NMA2039_1
  Rso:  RSc0904_1 RSp0197
  Hpy:  HP0291
  jHp:  jhp0276
  Cje:  Cj0316_1
  Atu:  AGc4890A
  Sme:  SMc02253 SMc03858
  Bme:  BMEI0226
  Mlo:  mlr4380
  Ccr:  CC1116 CC2222
_______

[R] COG1606 ATP-utilizing enzymes of the PP-loop superfamily
  Afu:  AF0559 AF1556
  Mac:  MA0240
  Mth:  MTH990
  Mja:  MJ0830
  Mka:  MK0071
  Tma:  TM0966 TM1075
  Cac:  CAC0775
  Syn:  slr1717
  Nos:  alr1286
_______

[I] COG1607 Acyl-CoA hydrolase
  Hbs:  VNG0873G VNG2426G
  Tac:  Ta0599
  Tvo:  TVN0637
  Pya:  PAE3404
  Sso:  SSO2287
  Ape:  APE0342
  Dra:  DR0279 DRB0106
  Cgl:  Cgl2532
  Sau:  SA1694
  Lin:  lin2060
  Bsu:  BS_ykhA
  Bha:  BH0798 BH2302
  Eco:  yciA
  EcZ:  ZyciA
  Ecs:  ECs1753
  Ype:  YPO2195
  Sty:  STM1736
  Buc:  BU274
  Vch:  VC1701 VCA0941
  Pae:  PA0449 PA2693 PA3741 PA5371 PA5519
  Hin:  HI0827
  Pmu:  PM0328
  Nme:  NMB0925 NMB1482
  NmA:  NMA1121 NMA1691
  Rso:  RSc0477 RSp0203
  Hpy:  HP0891
  jHp:  jhp0824
  Cje:  Cj0915
  Atu:  AGc3625 AGl1969 AGl2016
  Sme:  SMb21634 SMc04228
  Bme:  BMEI0503
  Mlo:  mll2602
  Ccr:  CC0190
  Ctr:  CT535
  Cpn:  CPn0654
_______

[R] COG1608 Predicted archaeal kinase
  Afu:  AF2288
  Hbs:  VNG1148G
  Mac:  MA0603
  Mth:  MTH47
  Mja:  MJ0044
  Mka:  MK0777
  Tac:  Ta0103
  Tvo:  TVN0180
  Pho:  PH1623
  Pab:  PAB0373
  Pya:  PAE1012
  Sso:  SSO0064
  Ape:  APE1768
_______

[K] COG1609 Transcriptional regulators
  Tma:  TM0275 TM0299 TM0949 TM1200 TM1218 TM1856
  Fnu:  FN1471
  Dra:  DR1884 DR2501
  Cac:  CAC0360 CAC0393 CAC0693 CAC0856 CAC1340 CAC2962 CAC3037
        CAC3553
  Cgl:  Cgl0170 Cgl0179 Cgl1222 Cgl1332 Cgl1996 Cgl2058 Cgl2431
        Cgl2432 Cgl2576
  Mtu:  Rv3575c
  MtC:  MT3680
  Lla:  L01009 L0143 L0144 L0145 L0146 L0147 L0225
  Spy:  SPy0514 SPy0627 SPy1293 SPy1297 SPy1535 SPy1602 SPy1817
  Spn:  SP0330 SP1725 SP1799 SP1821 SP1854 SP1999 SP2112
  Sau:  SA0261 SA1339 SA1557 SA1847
  Lin:  lin0030 lin0539 lin0764 lin0851 lin1640 lin1838 lin2102
        lin2233 lin2880 lin2974
  Bsu:  BS_araR BS_ccpA BS_degA BS_kdgR BS_lacR BS_msmR BS_rbsR
        BS_yhjM BS_yjmH BS_ykvZ BS_yvdE BS_yyaG
  Bha:  BH0901 BH1250 BH1516 BH1855 BH1875 BH1928 BH2018
        BH2219 BH2227 BH2313 BH2923 BH3230 BH3241 BH3692
        BH3727
  Eco:  ascG cytR ebgR fruR galR galS gntR
        idnR lacI malI purR rbsR treR xylR_1
        ycjW
  EcZ:  Z3626 ZascG ZcytR ZebgR ZfruR ZgalR ZgalS
        ZgntR ZlacI ZmalI ZpurR ZrbsR ZtreR ZxylR_1
        ZycjW
  Ecs:  ECs0084 ECs0398 ECs1899 ECs2328 ECs2367 ECs3043 ECs3244
        ECs3570 ECs3694 ECs3957 ECs4287 ECs4452_1 ECs4695 ECs4861
        ECs5218
  Ype:  YPO0108 YPO0165 YPO0543 YPO0611 YPO0758 YPO0795 YPO0846
        YPO0849 YPO1642 YPO2283 YPO2387 YPO2478 YPO2498 YPO2537
        YPO2568 YPO3698 YPO3955 YPO4034_1
  Sty:  STM0118 STM1430 STM1555 STM2191 STM2345 STM3011 STM3012
        STM3543 STM3633 STM3662_1 STM3696 STM3886 STM4094 STM4455
        STM4481
  Vch:  VC0289 VC0909 VC1286 VC1557 VC1721 VC2337 VC2677
        VCA0132 VCA0519 VCA0654 VCA0673
  Pae:  PA1949 PA2259 PA2320 PA3563
  Hin:  HI0506 HI0821 HI1106_1 HI1635
  Pmu:  PM0151 PM0547 PM0791 PM0868 PM1037 PM1847
  Xfa:  XF1463
  Rso:  RSc1014 RSc1790 RSc2860 RSp1286 RSp1616 RSp1637
  Atu:  AGc1043 AGc2807 AGl1004 AGl1215 AGl1316 AGl273 AGl2970
        AGl3298 AGl3403 AGl3490 AGl391 AGl625 AGl726 AGl892
        AGl987 AGpA111 AGpA13 AGpA336 AGpA567
  Sme:  SMa0078 SMb20014 SMb20154 SMb20230 SMb20290 SMb20324 SMb20366
        SMb20483 SMb20537 SMb20667 SMb20674 SMb20717 SMb20967 SMb20977
        SMb21272 SMb21346 SMb21372 SMb21598 SMb21650 SMb21706 SMc02975
        SMc03060 SMc04260 SMc04401
  Bme:  BMEI0019 BMEI1744 BMEII0312 BMEII0946 BMEII0985
  Mlo:  mll1683 mll2094 mll4964 mll7541 mll8376 mlr1005 mlr1020
        mlr1512 mlr2242 mlr3045 mlr3320 mlr5115 mlr5161 mlr7217
        mlr8213
  Ccr:  CC0513 CC0516 CC0573 CC0969 CC1137 CC1489 CC1627
        CC1753 CC2053 CC2284 CC2316 CC2355 CC3065
  Mpu:  MYPU_6220
_______

[S] COG1610 Uncharacterized conserved protein
  Sce:  YOR215c
  Tma:  TM0690
  Cac:  CAC1289
  Cgl:  Cgl0278
  Mtu:  Rv3688c
  MtC:  MT3790
  Lin:  lin1505
  Bsu:  BS_yqeY
  Bha:  BH1355
  Vch:  VC0519
  Pae:  PA0578
  Xfa:  XF0433
  Nme:  NMB1951
  NmA:  NMA0501
  Rso:  RSc2217
  Cje:  Cj0573
  Atu:  AGc3935
  Sme:  SMc01568
  Bme:  BMEI0527
  Mlo:  mll2487
_______

[R] COG1611 Predicted Rossmann fold nucleotide-binding protein
  Afu:  AF1126
  Mac:  MA2509
  Mka:  MK1390
  Tac:  Ta0501
  Tvo:  TVN0785
  Pho:  PH0255
  Pab:  PAB2196
  Pya:  PAE0967
  Sso:  SSO1261
  Sce:  YJL055w
  Aae:  aq_134 aq_1884
  Tma:  TM1055
  Fnu:  FN0535
  Dra:  DR0471
  Cgl:  Cgl1086 Cgl2328
  Mtu:  Rv1205 Rv2491
  MtC:  MT1243 MT2566
  Mle:  ML1061
  Lla:  L92927
  Sau:  SA0635
  Bsu:  BS_yvdD
  Bha:  BH2746 BH3084
  Nos:  alr0053
  Eco:  ygdH
  EcZ:  ZygdH
  Ecs:  ECs3655
  Ype:  YPO1033
  Sty:  STM2969
  Vch:  VC0899
  Pae:  PA3615 PA4115 PA4923
  Pmu:  PM0475
  Xfa:  XF0472
  Nme:  NMB0283
  NmA:  NMA2204
  Rso:  RSc2087 RSc2231
  Cje:  Cj0054c
  Atu:  AGc1969 AGc649
  Sme:  SMc01731 SMc02544
  Bme:  BMEI1495 BMEII0271
  Mlo:  mll4842 mll7812
  Ccr:  CC0810 CC1313_2
  Ctr:  CT387_2
  Cpn:  CPn0490_2
_______

[O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly
  Hbs:  VNG0666G_1 VNG1623G
  Ape:  APE1694
  Sce:  YER141w
  Spo:  SPAC22E12.10c_1
  Aae:  aq_153
  Dra:  DR2617
  Cgl:  Cgl1532
  Mtu:  Rv1456c
  MtC:  MT1503
  Mle:  ML0587
  Sau:  SA0964
  Lin:  lin2164
  Bsu:  BS_ctaA
  Bha:  BH2617
  Syn:  sll1898
  Nos:  all0949
  Pae:  PA0112
  Xfa:  XF1359
  Rso:  RSc0371
  Atu:  AGc2290
  Sme:  SMc01800
  Bme:  BMEI1172
  Mlo:  mlr8450
  Ccr:  CC1374
  Rpr:  RP257
  Rco:  RC0343
_______

[P] COG1613 ABC-type sulfate transport system, periplasmic component
  Mtu:  Rv2400c
  MtC:  MT2471
  Mle:  ML0615
  Bha:  BH3127
  Syn:  slr1452
  Nos:  all0322
  Eco:  sbp
  EcZ:  Zsbp
  Ecs:  ECs4842
  Ype:  YPO0079
  Sty:  STM4063
  Pae:  PA0283 PA1493
  Xfa:  XF1344
  Nme:  NMB1017
  NmA:  NMA1243
  Rso:  RSc1336
  Atu:  AGc1501
  Sme:  SMa2069 SMb21133
  Bme:  BMEI1841
  Mlo:  mlr1666
  Ccr:  CC0286
_______

[C] COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit
  Afu:  AF0379
  Mac:  MA1014 MA3862
  Mth:  MTH1710
  Mja:  MJ0152_2 MJ0156
  Mka:  MK0720
_______

[S] COG1615 Uncharacterized conserved protein
  Afu:  AF1421
  Cac:  CAC0010
  Cgl:  Cgl0762
  Mtu:  Rv0064 Rv3193c
  MtC:  MT0070 MT3285
  Mle:  ML0644
  Syn:  sll1060
  Nos:  alr1036 alr1037
_______

[S] COG1617 Uncharacterized conserved protein
  Afu:  AF0519
  Mac:  MA1150
  Mth:  MTH722
  Mja:  MJ0187
  Mka:  MK0270
  Pho:  PH0770
  Pab:  PAB1522
_______

[F] COG1618 Predicted nucleotide kinase
  Afu:  AF0814
  Mac:  MA3402
  Mth:  MTH1068
  Mja:  MJ1559
  Mka:  MK0827
  Tac:  Ta0998
  Tvo:  TVN0737
  Pho:  PH0792
  Pab:  PAB1537
  Pya:  PAE3292
  Sso:  SSO2171
  Ape:  APE0781
  Aae:  aq_1292
  Tma:  TM0036
_______

[V] COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
  Tac:  Ta0234
  Tvo:  TVN1361
  Fnu:  FN0108
  Dra:  DR2000
  Cac:  CAC0293 CAC1419
  Lla:  L152002
  Spn:  SP0182
  Lin:  lin0027 lin1679
  Bsu:  BS_ykfA BS_yocD
  Bha:  BH0726
  Syn:  slr1534
  Nos:  alr2723 alr3273
  Eco:  ldcA
  EcZ:  Z1955
  Ecs:  ECs1688
  Sty:  STM1800
  Vch:  VCA0337 VCA0439
  Pae:  PA5198
  Nme:  NMB1620
  NmA:  NMA1819
  Rso:  RSc1452
  Rpr:  RP402
  Rco:  RC0549 RC0705
  Tpa:  TP0688
  Mpu:  MYPU_0940
_______

[C] COG1620 L-lactate permease
  Afu:  AF0806
  Hbs:  VNG6383G
  Mka:  MK1652
  Sso:  SSO2126
  Dra:  DR1906
  Sau:  SA0106 SA2156
  Bsu:  BS_lctP BS_yvfH
  Bha:  BH0219 BH1831 BH3936
  Eco:  lldP yghK
  EcZ:  ZlldP
  Ecs:  ECs4481
  Sty:  STM3692
  Vch:  VCA0983
  Pae:  PA4770
  Hin:  HI1218
  Pmu:  PM1852
  Nme:  NMB0543 NMB1712
  NmA:  NMA0722 NMA1966
  Rso:  RSc0981
  Hpy:  HP0140 HP0141
  jHp:  jhp0128 jhp0129
  Cje:  Cj0076c
  Bme:  BMEI1232 BMEI1233
  Bbu:  BB0604
_______

[G] COG1621 Beta-fructosidases (levanase/invertase)
  Sce:  YIL162w
  Spo:  SPAC8E11.01c SPCC191.11
  Tma:  TM1414
  Cac:  CAC0425 CAC1462 CAC1773
  Cgl:  Cgl1092 Cgl2591
  Spy:  SPy1816
  Spn:  SP1724 SP1795
  Sau:  SA1846
  Bsu:  BS_sacA BS_sacC BS_yveB
  Bha:  BH1858
  EcZ:  Z3625
  Ecs:  ECs3243
  Vch:  VCA0655
  Pmu:  PM1848
  Rso:  RSp1284
  Atu:  AGc1721
_______

[C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2
  Afu:  AF0142 AF0144
  Hbs:  VNG0665G VNG2195G
  Pya:  PAE1338 PAE1355
  Sso:  SSO2658 SSO2969
  Ape:  APE0792 APE1720
  Sce:  Q0250
  Aae:  aq_2190 aq_2191a
  Dra:  DR2619
  Cgl:  Cgl2147
  Mtu:  Rv2200c
  MtC:  MT2256
  Mle:  ML0875
  Sau:  SA0913
  Lin:  lin0013
  Bsu:  BS_ctaC_1 BS_qoxA
  Bha:  BH0740 BH2064 BH2615_1
  Syn:  sll0813 slr1136
  Nos:  alr0950 alr2514 alr2731
  Eco:  cyoA
  EcZ:  ZcyoA
  Ecs:  ECs0486
  Ype:  YPO3164
  Sty:  STM0443
  Buc:  BU472
  Pae:  PA0105_1 PA1317
  Xfa:  XF1390
  Rso:  RSc0362_1 RSc1858 RSc2917 RSp1564_1 RSp1653
  Atu:  AGc1397 AGc230
  Sme:  SMb21368_1 SMb21487 SMc00009 SMc01982
  Bme:  BMEI1466 BMEI1901
  Mlo:  mll9631_1 mlr1039 mlr6846 mlr7490
  Ccr:  CC1773 CC3407
  Rpr:  RP406
  Rco:  RC0555
_______

[R] COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain)
  Tma:  TM0200
  Fnu:  FN0158
  Cac:  CAC3187
  Cgl:  Cgl2613
  Mtu:  Rv3586
  MtC:  MT3692
  Bsu:  BS_yacK
  Bha:  BH0105
_______

[S] COG1624 Uncharacterized conserved protein
  Afu:  AF1759
  Hbs:  VNG1389C
  Mac:  MA0655
  Mja:  MJ1002
  Mka:  MK1507
  Pho:  PH1015
  Pab:  PAB1730
  Aae:  aq_1467
  Dra:  DR0007
  Cac:  CAC3079
  Lla:  L33187
  Spy:  SPy1036
  Spn:  SP1561
  Sau:  SA1967
  Lin:  lin2225
  Bsu:  BS_ybbP BS_yojJ
  Bha:  BH0265
  Syn:  sll0505
  Nos:  all2996
  Ctr:  CT012
  Cpn:  CPn0101
  Tpa:  TP0826
  Bbu:  BB0008
  Mpu:  MYPU_4070
  Mpn:  MPN244
  Mge:  MG105
_______

[C] COG1625 Fe-S oxidoreductase, related to NifB/MoaA family
  Mac:  MA4551
  Mth:  MTH1170
  Mja:  MJ0841
  Mka:  MK0243 MK0650 MK1488
  Pho:  PH1166
  Pab:  PAB0712
  Dra:  DR2521
  Cac:  CAC1710
  Syn:  slr2030
  Nos:  all1211
_______

[G] COG1626 Neutral trehalase
  Sce:  YBR001c YDR001c
  Spo:  SPBC660.07
  Ecu:  ECU02g1370
  Nos:  all0166
  Eco:  treA treF
  EcZ:  ZtreA ZtreF
  Ecs:  ECs1701 ECs4399
  Sty:  STM1796 STM3603
  Pae:  PA2416
  Rso:  RSp0277
  Tpa:  TP0931
  Bbu:  BB0381
_______

[S] COG1627 Uncharacterized protein conserved in archaea
  Mth:  MTH1028
  Mja:  MJ0835
  Mka:  MK0160
  Pho:  PH0648
  Pab:  PAB1455
_______

[S] COG1628 Uncharacterized conserved protein
  Afu:  AF1433
  Hbs:  VNG2081a
  Mac:  MA4269
  Mth:  MTH1316
  Mja:  MJ1150
  Mka:  MK0057
  Tac:  Ta0042
  Tvo:  TVN0037
  Pho:  PH0071
  Pab:  PAB2291
  Pya:  PAE0952
  Sso:  SSO0256
  Ape:  APE0476
  Dra:  DRA0167
_______

[P] COG1629 Outer membrane receptor proteins, mostly Fe transport
  Aae:  aq_529
  Fnu:  FN0499 FN0768 FN0831 FN0886 FN1971
  Syn:  sll1206 sll1406 sll1409 slr1490
  Nos:  all1101 all2148 all2158 all2236 all2578_1 all2610 all2619
        all2620 all2674 all3310 all4026 all4924 alr0397 alr1031_1
        alr2153 alr2175 alr2179 alr2185 alr2209 alr2211 alr2581
        alr2588 alr2592 alr2596 alr2626 alr3242 alr4028 alr4029
  Eco:  b1995_1 b1998 fhuA yncD
  EcZ:  Z2268 Z3159 Z4386 ZchuA ZfhuA ZprrA
  Ecs:  ECs0154 ECs1693 ECs2055 ECs2792 ECs3917 ECs4380
  Ype:  YPO0164 YPO0283 YPO0956 YPO0994 YPO1011 YPO1753 YPO1906
        YPO3923
  Sty:  STM0191 STM0364 STM1587
  Vch:  VC0200 VC2211 VCA0064 VCA0576 VCA0625
  Pae:  PA0151 PA0192 PA0434 PA0470 PA0781 PA1302 PA1365
        PA1613 PA1910 PA2057 PA2070 PA2089 PA2289 PA2335
        PA2466 PA2590 PA2911 PA3408 PA3790 PA4156 PA4675
        PA4710 PA4837 PA4897
  Hin:  HI0113 HI0262 HI0635 HI0661 HI0712 HI0994 HI1217
        HI1466m HI1565m
  Pmu:  PM0040 PM0300 PM0336 PM0337 PM0576 PM0741 PM0745
        PM1081 PM1282 PM1428 PM1622
  Xfa:  XF0339 XF0384 XF0550 XF1496 XF2134 XF2137 XF2237
        XF2713
  Nme:  NMB0293 NMB0461 NMB0964 NMB1497 NMB1540 NMB1668 NMB1988
  NmA:  NMA0453 NMA0474 NMA1161 NMA1558 NMA1700 NMA1739 NMA2024
        NMA2193
  Rso:  RSc0595 RSc0800 RSc1807 RSc2729 RSc2920 RSc2922 RSp0100
        RSp0244 RSp0414 RSp0416 RSp0811 RSp0878 RSp1062 RSp1271
  Hpy:  HP0876 HP0915 HP0916 HP1511 HP1512
  jHp:  jhp0810 jhp0851 jhp1404 jhp1405
  Cje:  Cj0178 Cj1614
  Atu:  AGc4156 AGc718 AGl1661 AGl2303 AGl2875 AGl930 AGpA446
  Sme:  SMa1747 SMa2414 SMc01611 SMc01657 SMc02726 SMc02890 SMc04205
  Bme:  BMEII0105 BMEII0297
  Mlo:  mlr1155
  Ccr:  CC0171 CC0185 CC0210 CC0214 CC0224 CC0335 CC0442
        CC0446 CC0454 CC0539 CC0562 CC0563 CC0571 CC0579
        CC0663 CC0722 CC0815 CC0970 CC0983 CC0991 CC0995
        CC0999 CC1093 CC1099 CC1113 CC1131 CC1136 CC1138
        CC1142 CC1145 CC1517 CC1623 CC1666 CC1754 CC1778
        CC1781 CC1791 CC1809 CC1970 CC2027 CC2149 CC2194
        CC2287 CC2398 CC2660 CC2709 CC2804 CC2819 CC2820
        CC2832 CC2924 CC2928 CC3001 CC3013 CC3127 CC3146
        CC3147 CC3161 CC3194 CC3336 CC3436 CC3461 CC3500
_______

[S] COG1630 Uncharacterized protein conserved in archaea
  Afu:  AF1033
  Mth:  MTH306
  Mja:  MJ1262 MJECL07
  Tac:  Ta0160
  Tvo:  TVN0230
  Pho:  PH0928
  Pab:  PAB0813
  Sso:  SSO2248
  Ape:  APE0109
_______

[J] COG1631 Ribosomal protein L44E
  Afu:  AF1333
  Hbs:  VNG0551G
  Mac:  MA0646
  Mth:  MTH1310
  Mja:  MJ0249
  Mka:  MK0417
  Tac:  Ta1205
  Tvo:  TVN0414
  Pho:  PH1940
  Pab:  PAB1221
  Pya:  PAE3034
  Sso:  SSO7111
  Ape:  APES016
  Sce:  YHR141c YNL162w
  Spo:  SPAC15E1.03
  Ecu:  ECU10g1300
_______

[J] COG1632 Ribosomal protein L15E
  Afu:  AF2319
  Hbs:  VNG0177G
  Mac:  MA1784
  Mth:  MTH690
  Mja:  MJ0983
  Mka:  MK0389
  Tac:  Ta1286m
  Tvo:  TVN0535
  Pho:  PH0978
  Pab:  PAB0575
  Pya:  PAE1639_2 PAE1833
  Sso:  SSO0742
  Ape:  APE1452
  Sce:  YLR029c YMR121c
  Spo:  SPAC1783.08c SPCC576.11
  Ecu:  ECU11g1380i
_______

[S] COG1633 Uncharacterized conserved protein
  Mac:  MA3429 MA3742
  Mth:  MTH1824
  Pho:  PH0568 PH1057 PH1734
  Pab:  PAB0624 PAB1671_1 PAB1727 PAB1750 PAB2074
  Sso:  SSO2749
  Aae:  aq_331
  Tma:  TM0009 TM0095 TM1526
  Cac:  CAC1633 CAC3002
  Bsu:  BS_yhjR
  Bha:  BH1034
  Atu:  AGc430
  Sme:  SMa1178 SMc00359
  Bme:  BMEI0354
  Mlo:  mlr4601
_______

[R] COG1634 Uncharacterized Rossmann fold enzyme
  Afu:  AF0878
  Hbs:  VNG1343C
  Mac:  MA2430
  Mth:  MTH1600
  Mja:  MJ1634
  Mka:  MK1076
  Tac:  Ta1431
  Tvo:  TVN1449
  Pho:  PH1244
  Pab:  PAB1706
  Pya:  PAE2328
  Sso:  SSO2408
  Ape:  APE2323
_______

[H] COG1635 Flavoprotein involved in thiazole biosynthesis
  Afu:  AF0702
  Hbs:  VNG2604Gm
  Mac:  MA2851
  Mth:  MTH1620
  Mja:  MJ0601
  Mka:  MK0430
  Pho:  PH1357
  Pab:  PAB0536
  Pya:  PAE0175
  Sso:  SSO0436
  Ape:  APE2149
  Sce:  YGR144w
  Spo:  SPBC26H8.01
  Tma:  TM0787
_______

[S] COG1636 Uncharacterized protein conserved in bacteria
  Aae:  aq_701
  Tma:  TM0731
  Fnu:  FN0521
  Cac:  CAC1577
  Lla:  L6208
  Spy:  SPy0233
  Sau:  SA2377
  Hin:  HI0882
  Pmu:  PM0345
  Xfa:  XF2273
  Nme:  NMB1039
  NmA:  NMA1447
  Hpy:  HP0100
  jHp:  jhp0092
  Cje:  Cj0272
  Rpr:  RP851
  Rco:  RC1320
_______

[L] COG1637 Predicted nuclease of the RecB family
  Hbs:  VNG0171C VNG1986C
  Mth:  MTH1816
  Mja:  MJ0225
  Mka:  MK0507
  Pho:  PH0128
  Pab:  PAB2263
  Pya:  PAE1797
  Sso:  SSO2208
  Ape:  APE0957
  Cgl:  Cgl1188
  Mtu:  Rv1321
  MtC:  MT1363
  Mle:  ML1155
  Nos:  alr7357
_______

[G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
  Tma:  TM0322
  Fnu:  FN1258 FN1472
  Cgl:  Cgl2289
  Bsu:  BS_ydbE
  Bha:  BH0701 BH2673 BH2750 BH3390
  Syn:  sll1314
  Eco:  yiaO
  Ype:  YPO1579
  Sty:  STM3169 STM3673 STM4054
  Vch:  VC1779 VC1929
  Pae:  PA0884 PA3779 PA4616 PA5167
  Hin:  HI0052 HI0146 HI1028
  Pmu:  PM0275 PM1252 PM1525 PM1644 PM1651 PM1709
  Rso:  RSc2166 RSc2510
  Atu:  AGc4976 AGl115 AGl3114 AGl3125 AGl3305 AGl3344
  Sme:  SMa0157 SMa0252 SMb20036 SMb20295 SMb20320 SMb20374 SMb20442
        SMb20981 SMb21353 SMb21438 SMc00265 SMc00271
  Mlo:  mll9374_2
  Ccr:  CC1446
  Tpa:  TP0957
_______

[T] COG1639 Predicted signal transduction protein
  Tma:  TM0854
  Vch:  VC1081_2 VC1152 VCA0034
  Pae:  PA0267_2 PA0356 PA0758 PA5346_2
  Cje:  Cj0248
  Tpa:  TP0073
_______

[G] COG1640 4-alpha-glucanotransferase
  Pya:  PAE1209
  Aae:  aq_723
  Fnu:  FN0858
  Dra:  DR1637
  Cgl:  Cgl2245
  Mtu:  Rv1781c
  MtC:  MT1831
  Lla:  L93919 L94405
  Spy:  SPy1292
  Spn:  SP2107
  Syn:  sll1676
  Nos:  alr3871
  Eco:  malQ
  EcZ:  ZmalQ
  Ecs:  ECs4258
  Ype:  YPO0126
  Sty:  STM3513
  Vch:  VCA0014
  Pae:  PA2163
  Hin:  HI1356
  Pmu:  PM0540
  Rso:  RSp0236
  Ctr:  CT087
  Cpn:  CPn0326
  Bbu:  BB0166
_______

[S] COG1641 Uncharacterized conserved protein
  Afu:  AF2097
  Mac:  MA0369 MA0429
  Mth:  MTH1109
  Mja:  MJ1387
  Mka:  MK0293 MK1105
  Tma:  TM0964
  Cac:  CAC0774
  Cgl:  Cgl2418
  Syn:  slr1411
  Nos:  all0200
_______

[L] COG1643 HrpA-like helicases
  Sce:  YER013w_2 YGL120c YKL078w YKR086w YLR419w YMR128w YNR011c
  Spo:  SPAC10F6.02c_2 SPAC145.03 SPAC2G11.11c SPAPB1A10.06c SPBC15C4.05 SPBC16H5.10c SPBC1711.17
        SPBC19C2.01 SPCC895.09c
  Ecu:  ECU04g0250 ECU09g0150 ECU10g0680 ECU11g0860
  Dra:  DR0420
  Cgl:  Cgl0142 Cgl1881
  Eco:  hrpA hrpB
  EcZ:  ZhrpA ZhrpB
  Ecs:  ECs0152 ECs2015
  Ype:  YPO2322 YPO3394
  Sty:  STM0189 STM1641
  Vch:  VC0601 VC1382
  Pae:  PA3297 PA3961
  Hin:  HI1070
  Pmu:  PM0769
  Xfa:  XF1229 XF1383
  Nme:  NMB2007 NMB2011
  NmA:  NMA0430 NMA0433
  Rso:  RSc1251
  Atu:  AGc86
  Sme:  SMc02586
  Bme:  BMEI1817 BMEI1818
  Mlo:  mlr5306
  Ccr:  CC1185
  Tpa:  TP0526
  Bbu:  BB0827
_______

[K] COG1644 DNA-directed RNA polymerase, subunit N (RpoN/RPB10)
  Afu:  AF1130
  Hbs:  VNG1140G
  Mac:  MA0598
  Mth:  MTH40
  Mja:  MJ0196
  Mka:  MK1478
  Tac:  Ta0431
  Tvo:  TVN1137
  Pho:  PH1632
  Pab:  PAB7131
  Pya:  PAE0675a
  Sso:  SSO5140
  Ape:  APES058
  Sce:  YOR210w
  Spo:  SPAC1B3.12c
  Ecu:  ECU06g0320
_______

[R] COG1645 Uncharacterized Zn-finger containing protein
  Afu:  AF2370
  Hbs:  VNG2366C
  Mac:  MA0093
  Mja:  MJ0890
  Mka:  MK1588
  Pho:  PH0795
  Pab:  PAB1540
  Pya:  PAE1624
  Sso:  SSO0781
  Ape:  APE0207
_______

[R] COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold
  Afu:  AF0403
  Hbs:  VNG0252C VNG1918C
  Mac:  MA3969
  Mth:  MTH552
  Mja:  MJ1250
  Mka:  MK0642
  Tac:  Ta0995
  Tvo:  TVN0734
  Pho:  PH1124
  Pab:  PAB0735
  Pya:  PAE3045
  Sso:  SSO0259
  Ape:  APE0621
  Sau:  SA1722
  Lin:  lin1872
  Bsu:  BS_yerE
  Bha:  BH0647
_______

[R] COG1647 Esterase/lipase
  Tma:  TM1022
  Sau:  SA0416 SA0734
  Lin:  lin0850 lin2544 lin2546
  Bsu:  BS_yvaK
  Bha:  BH3554
  Tpa:  TP0902
_______

[H] COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
  Afu:  AF1592
  Hbs:  VNG1775C
  Mac:  MA0576
  Mth:  MTH1013
  Mja:  MJ0140
  Mka:  MK1495
  Tac:  Ta0652
  Tvo:  TVN0924
  Pya:  PAE0585
  Ape:  APE1491
  Sce:  YBR213w YKR069w_1
  Spo:  SPAC4D7.06c SPCC1739.06c_1
  Aae:  aq_1237
  Fnu:  FN0539
  Cac:  CAC0096
  Mtu:  Rv2847c_1
  MtC:  MT2913_1
  Sau:  SA2412
  Lin:  lin1105
  Bsu:  BS_ylnF
  Bha:  BH1497
  Eco:  cysG_1
  EcZ:  ZcysG_1
  Ecs:  ECs4219_1
  Ype:  YPO0158_1 YPO3367_1
  Sty:  STM3477_1
  Buc:  BU425_1
  Vch:  VC1363_1
  Pae:  PA2611_1
  Xfa:  XF0832_1
  Nme:  NMB1156_1 NMB1194_1
  NmA:  NMA1367_1
  Atu:  AGc2683_1 AGl1897_1
  Sme:  SMb20987_1 SMc01053_1
  Bme:  BMEI1768_1
  Mlo:  mll3232_1
  Ccr:  CC0024_1
_______

[S] COG1649 Uncharacterized protein conserved in bacteria
  Dra:  DR2412 DRA0207
  Bsu:  BS_yngK
  Syn:  sll0736 slr0592
  Nos:  all1210_2 all1776_2 all2116 all3933 all4081 all8067 alr5270
  Eco:  yddW
  EcZ:  Z2217
  Ecs:  ECs2096
  Ype:  YPO2538
  Rso:  RSp0758
  Bme:  BMEI0651
_______

[S] COG1650 Uncharacterized protein conserved in archaea
  Afu:  AF0625
  Hbs:  VNG0378C
  Mac:  MA2046
  Mja:  MJ0166
  Mka:  MK0939
  Tac:  Ta0022
  Tvo:  TVN0077
  Pho:  PH0006
  Pab:  PAB2349
  Pya:  PAE2331
  Sso:  SSO2234
  Ape:  APE1483
_______

[O] COG1651 Protein-disulfide isomerase
  Afu:  AF1354
  Hbs:  VNG2282C
  Pya:  PAE2897_2 PAE3152 PAE3285
  Aae:  aq_1740 aq_2093
  Dra:  DR0560 DR0753 DR2019
  Cgl:  Cgl0018 Cgl2488
  Mtu:  Rv1743_2 Rv2969c
  MtC:  MT1785_2 MT3047
  Mle:  ML1667
  Sau:  SA2197
  Lin:  lin1051
  Bsu:  BS_yvgV
  Syn:  slr0313
  Nos:  all0902 alr2140
  Eco:  dsbC dsbG
  EcZ:  ZdsbC ZdsbG
  Ecs:  ECs0643 ECs3765
  Ype:  YPO0891
  Sty:  STM0028 STM0607 STM1115 STM3043
  Vch:  VC2418
  Pae:  PA0982 PA2476 PA3737
  Hin:  HI1213
  Pmu:  PM0191
  Xfa:  XF1424
  Nme:  NMB0550
  NmA:  NMA0730
  Rso:  RSc2892
  Hpy:  HP0231
  jHp:  jhp0216
  Cje:  Cj1380
  Atu:  AGc1464 AGc2458
  Sme:  SMc00023 SMc01342
  Bme:  BMEI1060 BMEI1440 BMEI1561
  Mlo:  mll0208 mlr7525
  Ccr:  CC0374 CC0375 CC1879
  Rpr:  RP025 RP431
  Rco:  RC0029 RC0597
  Ctr:  CT177
  Cpn:  CPn0228
_______

[S] COG1652 Uncharacterized protein containing LysM domain
  Dra:  DR0888
  Lin:  lin1283
  Bsu:  BS_xkdP BS_yqbP
  Nos:  all3321 all3487
  Eco:  ygaU
  EcZ:  ZygaU
  Ecs:  ECs3526
  Sty:  STM2795
  Vch:  VC0047
  Pae:  PA0020 PA5178
  Pmu:  PM1974
  Xfa:  XF0925
  Nme:  NMB0109
  NmA:  NMA0165
  Rso:  RSc0069 RSc2148
  Atu:  AGc1968
  Sme:  SMc02543 SMc02564
  Bme:  BMEI1493
  Mlo:  mlr3017_2 mlr6557 mlr7813
  Ccr:  CC2696_2
  Tpa:  TP0042 TP0259 TP0769
  Bbu:  BB0323_2
_______

[G] COG1653 ABC-type sugar transport system, periplasmic component
  Hbs:  VNG6277G
  Tac:  Ta0144 Ta0691_2
  Tvo:  TVN0205 TVN1143
  Pho:  PH0025 PH0753 PH1039 PH1214
  Pab:  PAB2333
  Pya:  PAE0689 PAE1324
  Sso:  SSO0999 SSO2847 SSO3066_1
  Ape:  APE0035 APE1630
  Tma:  TM0432 TM0595 TM0810 TM1120 TM1235 TM1855
  Dra:  DR1438
  Cac:  CAC0429 CAC0662 CAC0664 CAC1456 CAC2912 CAC3672
  Cgl:  Cgl0706 Cgl1352 Cgl2408
  Mtu:  Rv1235 Rv2041c Rv2318 Rv2833c
  MtC:  MT1273 MT2101 MT2381 MT2899
  Mle:  ML1086 ML1427 ML1770
  Lla:  L127223
  Spy:  SPy0252 SPy1591 SPy1592
  Spn:  SP0092 SP1683 SP1690 SP1796 SP1897
  Lin:  lin0220 lin0762 lin0852 lin1841 lin2115 lin2972
  Bsu:  BS_araN BS_lplA BS_msmE BS_yesO BS_ytcQ BS_yurO
  Bha:  BH0482 BH0796 BH0905 BH1064 BH1079 BH1117 BH1244
        BH1864 BH1913 BH1924 BH2111 BH2226 BH2726 BH3680
        BH3690 BH3845
  Syn:  slr0529 slr1865 slr1897
  Nos:  all1027 all1916 alr2722 alr4277
  Eco:  ugpB ycjN
  EcZ:  Z2474m ZugpB
  Ecs:  ECs1888 ECs1889 ECs4299
  Ype:  YPO0612 YPO1719 YPO1893 YPO2477 YPO3472 YPO3796
  Sty:  STM3557
  Vch:  VC1549 VCA1033
  Pae:  PA2338 PA3190
  Pmu:  PM1762
  Xfa:  XF2448
  Rso:  RSc1264 RSc2144 RSc3051
  Atu:  AGc1045 AGc2594 AGc4552 AGc4715 AGc529 AGc689 AGl1009
        AGl1217 AGl1777 AGl1912 AGl2941 AGl2966 AGl3070 AGl3153
        AGl3248 AGl3270 AGl3289 AGl3319 AGl3359 AGl3389 AGl3404
        AGl3413 AGl3424 AGl3560 AGl456 AGl615 AGl841 AGpA114
        AGpA115 AGpA379 AGpA587 AGpA676 AGpA77
  Sme:  SMa0709 SMa1337 SMa1364 SMa2305 SMb20231 SMb20325 SMb20416
        SMb20538 SMb20634 SMb20660 SMb20971 SMb21090 SMb21103 SMb21151
        SMb21221 SMb21461 SMb21595 SMb21604 SMb21652 SMc01496 SMc01628
        SMc01977 SMc02471 SMc02514 SMc02873 SMc03061 SMc04135 SMc04259
        SMc04396
  Bme:  BMEI1716 BMEII0115 BMEII0542 BMEII0590 BMEII0625 BMEII0754 BMEII0755
        BMEII0945
  Mlo:  mll0702 mll0854 mll1712 mll3319 mll3384 mll3503 mll3590
        mll4149 mll4927 mll5113 mll5302 mll7154 mll7157 mll8488
        mlr2244 mlr2326 mlr3050 mlr3639 mlr4771 mlr4910 mlr6435
        mlr6651 mlr7000 mlr7091 mlr7225 mlr7261
  Tpa:  TP0074 TP0737
_______

[K] COG1654 Biotin operon repressor
  Afu:  AF0074_1
  Hbs:  VNG1534a_1
  Mac:  MA0676_1
  Pab:  PAB0104_1
  Dra:  DR2341_2
  Cac:  CAC0212_1
  Lla:  L0191_1
  Spy:  SPy1362_1
  Spn:  SP1900_1
  Sau:  SA1289_1
  Lin:  lin2018_1
  Bsu:  BS_birA_1
  Bha:  BH1685_1
  Eco:  birA_1
  EcZ:  ZbirA_1
  Ecs:  ECs4900_1
  Ype:  YPO3759_1
  Sty:  STM4138_1
  Vch:  VC0319_1
  Pae:  PA4280_1
  Hin:  HI0220.1_1
  Pmu:  PM0296_1
  Xfa:  XF1796_1
_______

[S] COG1655 Uncharacterized protein conserved in bacteria
  Tma:  TM0569
  Cac:  CAC0641
  Tpa:  TP0829
  Bbu:  BB0011
_______

[S] COG1656 Uncharacterized conserved protein
  Afu:  AF1431
  Mka:  MK0487
  Tac:  Ta1099
  Tvo:  TVN0462
  Pho:  PH0738
  Pab:  PAB1509
  Pya:  PAE3262
  Sso:  SSO0194
  Ape:  APE2177
  Aae:  aq_1110
  Tma:  TM0779 TM1358
  Mtu:  Rv0579
  MtC:  MT0608.1
  Rso:  RSp1109
  Tpa:  TP0777
_______

[I] COG1657 Squalene cyclase
  Mac:  MA3182
  Mka:  MK1043 MK1301 MK1533
  Sce:  YHR072w
  Spo:  SPAC13G7.01c SPAC4G9.21c
  Bsu:  BS_sqhC
  Syn:  slr2089
  Nos:  all0775
_______

[L] COG1658 Small primase-like proteins (Toprim domain)
  Afu:  AF0905
  Mac:  MA4098
  Mth:  MTH890
  Mja:  MJ1624
  Tac:  Ta1150a
  Tvo:  TVN1235
  Pho:  PH1700
  Pab:  PAB0315
  Aae:  aq_2086
  Fnu:  FN0039
  Cac:  CAC2987
  Lla:  L88730
  Spy:  SPy0261
  Spn:  SP1990
  Sau:  SA0450 SA0768
  Lin:  lin0226
  Bsu:  BS_yabF BS_yusF
  Bha:  BH0056
  Bbu:  BB0626
  Uur:  UU194
  Mpn:  MPN072
  Mge:  MG057
_______

[S] COG1659 Uncharacterized protein, linocin/CFP29 homolog
  Aae:  aq_1760
  Tma:  TM0785
  Mtu:  Rv0798c
  MtC:  MT0819
_______

[R] COG1660 Predicted P-loop-containing kinase
  Fnu:  FN1089
  Dra:  DR1434
  Cac:  CAC0511
  Cgl:  Cgl1553
  Mtu:  Rv1421
  MtC:  MT1464
  Mle:  ML0563
  Lla:  L188550
  Spy:  SPy0652
  Spn:  SP1566
  Sau:  SA0720
  Lin:  lin2617
  Bsu:  BS_yvcJ
  Bha:  BH3569
  Eco:  yhbJ
  EcZ:  ZyhbJ
  Ecs:  ECs4084
  Ype:  YPO3586
  Sty:  STM3323
  Vch:  VC2532
  Pae:  PA4465
  Hin:  HI1146
  Pmu:  PM0169
  Xfa:  XF1405
  Nme:  NMB0738
  NmA:  NMA0948
  Rso:  RSc0403
_______

[R] COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif
  Afu:  AF0104
  Hbs:  VNG2339C
  Mac:  MA1669
  Mth:  MTH1230
  Mka:  MK0612
  Tac:  Ta0885m
  Tvo:  TVN0977
  Pho:  PH0802
  Pab:  PAB0835
  Ape:  APE1509
  Sau:  SA0649
  EcZ:  Z4267
  Ecs:  ECs3799
  Sty:  STM3071
  Vch:  VCA0587
  Atu:  AGl1425
  Sme:  SMb20067
  Mlo:  msl6857
_______

[L] COG1662 Transposase and inactivated derivatives, IS1 family
  Mac:  MA1046 MA1314 MA1649 MA1880 MA2161 MA2471 MA2733
        MA2786 MA3004 MA3221 MA3312 MA3374 MA3847 MA4107
        MA4224
  Sso:  SSO0511_2 SSO0541_2 SSO1372 SSO1436_2 SSO1654_2 SSO1683 SSO2320_2
        SSO2659 SSO2950_2
  Aae:  aq_1037
  Syn:  sll0986 sll1157 slr1903 slr2096
  Eco:  insB_g1 insB_g2 insB_g4 insB_g3 insB_g5 insB_g6
  EcZ:  Z1123 Z1192 Z1562 Z1632 Z5491
  Ecs:  ECs1301 ECs1372
  Ype:  YPO0963 YPO0967a YPO0980A
  Pmu:  PM1937
_______

[M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase
  Aae:  aq_1656
  Fnu:  FN1130
  Eco:  lpxK
  EcZ:  ZycaH
  Ecs:  ECs0998
  Ype:  YPO1396
  Sty:  STM0985
  Vch:  VC1877
  Pae:  PA2981
  Hin:  HI0059
  Pmu:  PM0860
  Xfa:  XF1082
  Nme:  NMB0672
  NmA:  NMA0872
  Rso:  RSc2530
  Hpy:  HP0328
  jHp:  jhp0311
  Cje:  Cj0811
  Atu:  AGc1257
  Sme:  SMc00892
  Bme:  BMEII1028
  Mlo:  mlr8270
  Ccr:  CC0301
  Rpr:  RP719
  Rco:  RC1092
  Ctr:  CT402
  Cpn:  CPn0529
_______

[M] COG1664 Integral membrane protein CcmA involved in cell shape determination
  Cac:  CAP0036
  Bsu:  BS_yhbE BS_yhbF
  Ype:  YPO4112
  Vch:  VCA1042
  Pae:  PA0664
  Xfa:  XF0404
  Rso:  RSc0493
  Hpy:  HP1542
  jHp:  jhp1457
  Cje:  Cj1086c
  Ccr:  CC1873 CC3022
  Ctr:  CT276
  Cpn:  CPn0425
  Tpa:  TP0048 TP0253 TP0267
  Bbu:  BB0231 BB0245 BB0538
_______

[S] COG1665 Uncharacterized protein conserved in archaea
  Afu:  AF1967
  Mac:  MA1193
  Mth:  MTH1231
  Mja:  MJ1086
  Mka:  MK0611
  Sso:  SSO0213
_______

[S] COG1666 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0566c
  MtC:  MT0592
  Bsu:  BS_yitK
  Bha:  BH2387
  Nos:  all4662
  Eco:  yajQ
  EcZ:  ZyajQ
  Ecs:  ECs0480
  Ype:  YPO3170
  Sty:  STM0435
  Vch:  VC1508
  Pae:  PA4395
  Hin:  HI1034
  Pmu:  PM1656
  Rso:  RSc2549
  Cje:  Cj0374
_______

[S] COG1667 Uncharacterized protein conserved in archaea
  Afu:  AF1501
  Mth:  MTH1733
  Mja:  MJ0164
  Mka:  MK0624 MK0994
_______

[CP] COG1668 ABC-type Na+ efflux pump, permease component
  Afu:  AF1734 AF1735
  Hbs:  VNG0690C VNG0692C
  Mac:  MA4365
  Mth:  MTH1371 MTH1372
  Mja:  MJ1024
  Pho:  PH1531
  Pab:  PAB0435
  Pya:  PAE1171
  Sso:  SSO2404
  Ape:  APE1257 APE1932
  Tma:  TM0543
  Dra:  DR0926
  Cac:  CAC3550
  Lla:  L16848
  Spn:  SP1716
  Sau:  SA2131
  Lin:  lin2245
  Bsu:  BS_natB BS_yhaP
  Bha:  BH1167
  Xfa:  XF2328
  Ccr:  CC3298
_______

[R] COG1669 Predicted nucleotidyltransferases
  Afu:  AF1686
  Mac:  MA0100 MA0102 MA0766 MA1295 MA1305 MA2131 MA2376
  Mja:  MJ0126 MJ0128 MJ0435 MJ1215 MJ1217 MJ1379
  Tma:  TM0648
  Dra:  DR0248_1 DR0679 DR1806
  Syn:  sll1504 slr1241 ssl2749
  Nme:  NMB1265
  Atu:  AGc4229
  Ccr:  CC3080
_______

[J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
  Hbs:  VNG0486G VNG0487H VNG2078G VNG2321G VNG6213G
  Mac:  MA1158 MA3674
  Mja:  MJ1062_2
  Tac:  Ta0104m Ta1382
  Tvo:  TVN0181
  Pab:  PAB2081
  Sce:  YIR042c
  Spo:  SPBC17G9.06c SPBC18E5.08
  Tma:  TM0968
  Fnu:  FN1294 FN1683
  Dra:  DR0197 DR0604 DR0653 DR0796 DR0798 DR1534 DR1702
        DR1716 DR1800 DR2443
  Cac:  CAC0152 CAC0369 CAC1557 CAC2480 CAC2561 CAC3423
  Cgl:  Cgl0859 Cgl1007 Cgl1227 Cgl1389
  Mtu:  Rv0802c Rv0995 Rv1347c Rv3225c_1
  MtC:  MT0822 MT1024 MT1389 MT3323_1
  Mle:  ML0184
  Lla:  L1014 L1015 L56232 L95697
  Spy:  SPy1356 SPy1570
  Spn:  SP0255 SP0566 SP0953 SP1082 SP1237 SP1419 SP1807
  Sau:  SA0330 SA0634 SA2052 SA2474
  Lin:  lin0009 lin1339 lin1806 lin2089 lin2661 lin2976
  Bsu:  BS_ydaF BS_yjcK BS_yjdG BS_ykkB BS_ynaD BS_yoaA BS_yokL
  Bha:  BH0443 BH0585 BH0699 BH0837 BH1300 BH1498 BH1868
        BH1961 BH2121 BH2621
  Nos:  all0393 all1032 alr1302 alr7015 alr7052 alr7068 alr7095
  Eco:  rimJ rimL speG
  EcZ:  Z2291 ZrimJ ZspeG
  Ecs:  ECs1444 ECs2032 ECs2290
  Ype:  YPO0991 YPO1531 YPO1955 YPO2041 YPO2830
  Sty:  STM1167 STM1502 STM1611
  Vch:  VC0884 VC1309 VC1889 VCA0316 VCA0417 VCA0442 VCA0474
        VCA0947
  Pae:  PA1472 PA1928 PA2578 PA3248 PA3270 PA3944 PA3945
        PA5433
  Pmu:  PM1013
  Nme:  NMB2098
  NmA:  NMA0331
  Rso:  RSc0997
  Hpy:  HP0327
  jHp:  jhp0310
  Cje:  Cj1313
  Atu:  AGc1436 AGc3698 AGc4417 AGc4421 AGc5049 AGc5051 AGl1212gl
        AGl2364 AGl237 AGl4 AGl746 AGpA212
  Sme:  SMa2339 SMa2406 SMb20533 SMc00075 SMc01437 SMc01775 SMc02576
        SMc03151 SMc03773 SMc03774 SMc04442
  Bme:  BMEI0203 BMEI1452 BMEII0002
  Mlo:  mll0450 mll2986 mll3172 mll4016 mll5006 mll7514 mlr1450
        mlr2962 mlr5945 mlr7464
  Ccr:  CC0213 CC0317 CC0326 CC0691 CC1083 CC1456 CC1464
        CC1548 CC1718 CC3397
  Rpr:  RP693
  Rco:  RC1069
  Mpn:  MPN027
_______

[S] COG1671 Uncharacterized protein conserved in bacteria
  Cac:  CAC2825
  Sau:  SA0636
  Lin:  lin1493
  Bsu:  BS_yqxD
  Bha:  BH1374
  Eco:  yaiI
  EcZ:  Z0483
  Ecs:  ECs0436
  Ype:  YPO3033
  Sty:  STM0387
  Vch:  VC0881
  Pae:  PA5247
  Atu:  AGc2726
  Sme:  SMc01271
  Bme:  BMEI0088
  Mlo:  mlr0875
  Ccr:  CC1215
  Tpa:  TP0845
  Bbu:  BB0029
_______

[R] COG1672 Predicted ATPase (AAA+ superfamily)
  Mac:  MA0050 MA0078 MA0079_1 MA1854 MA2366
  Mth:  MTH196
  Mja:  MJ0074 MJ0075 MJ0147 MJ0423 MJ0424 MJ0425 MJ0439
        MJ0625 MJ0632 MJ0801 MJ0819 MJ0820 MJ0821 MJ1006
        MJ1010 MJ1076 MJ1301 MJ1609 MJ1659 MJECL04 MJECL14
        MJECL15 MJECL26
  Pho:  PH0379 PH0436 PH0437 PH0539 PH0541 PH0830m PH0840m
        PH0842 PH0843 PH0844 PH0846 PH0976 PH0977 PH1067
        PH1263
  Pab:  PAB0571 PAB0634 PAB0664 PAB0800 PAB0862 PAB1359 PAB1370
        PAB1371 PAB1412 PAB1413 PAB1516 PAB1582 PAB1597 PAB1598
        PAB1618 PAB1619 PAB1620 PAB1945 PAB1954 PAB2152 PAB2304
        PAB2383
  Pya:  PAE0213 PAE1120 PAE1257 PAE1306 PAE1789 PAE2540 PAE3424
  Sso:  SSO1196 SSO1204 SSO1330 SSO1545 SSO1680 SSO1918 SSO1939
        SSO2101 SSO2139 SSO2730 SSO3257
  Tma:  TM1011
  Fnu:  FN0123
  Syn:  slr1243
  Nos:  alr0840 alr0841
  Ype:  YPMT1.66c
  Cje:  Cj0792
_______

[S] COG1673 Uncharacterized protein conserved in archaea
  Afu:  AF2356
  Mth:  MTH310
  Mja:  MJ1382 MJECL36
  Pho:  PH1033
  Pab:  PAB1780 PAB2158
  Pya:  PAE0239 PAE1465 PAE1467
  Sso:  SSO2595
_______

[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins
  Dra:  DR0400
  Cac:  CAC0039_2 CAC0408_2 CAC1812 CAC1871 CAC3709
  Cgl:  Cgl0561 Cgl1922
  Mtu:  Rv0284 Rv1783 Rv1784 Rv2748c Rv3447c Rv3870 Rv3871
        Rv3894c
  MtC:  MT0297 MT1833 MT2819 MT3553 MT3983 MT3985 MT4010
  Mle:  ML0052 ML0053 ML0977 ML1543 ML2535
  Lla:  L0211
  Spy:  SPy0458 SPy2165
  Spn:  SP0878
  Sau:  SA0276 SA1119 SA1562
  Lin:  lin0054 lin1423 lin1647
  Bsu:  BS_spoIIIE BS_ydcQ BS_ytpT BS_yukA
  Bha:  BH0975_2 BH2395 BH3250
  Nos:  all7666
  Eco:  ftsK
  EcZ:  ZftsK
  Ecs:  ECs0975
  Ype:  YPO1376
  Sty:  STM0960
  Vch:  VC1903
  Pae:  PA2615
  Hin:  HI1595m
  Pmu:  PM0255
  Xfa:  XF1450
  Nme:  NMB1067 NMB1314
  NmA:  NMA1266 NMA1527
  Rso:  RSc2341 RSp0884
  Hpy:  HP0066 HP1090
  jHp:  jhp0061 jhp0335
  Cje:  Cj0886c_2
  Atu:  AGc5003 AGl3206
  Sme:  SMb20595 SMb20596 SMc03808
  Bme:  BMEI0168 BMEII0742
  Mlo:  mll4073 mll4243
  Ccr:  CC3704
  Rpr:  RP823
  Rco:  RC1274
  Ctr:  CT739
  Cpn:  CPn0880
  Tpa:  TP0999_2
  Bbu:  BB0257
  Uur:  UU508
_______

[K] COG1675 Transcription initiation factor IIE, alpha subunit
  Afu:  AF0757
  Hbs:  VNG0757G
  Mac:  MA3871
  Mth:  MTH1669
  Mja:  MJ0777
  Mka:  MK0495
  Pho:  PH0619
  Pab:  PAB0950
  Pya:  PAE0781
  Sso:  SSO0266
  Ape:  APE2004
  Sce:  YKL028w
  Spo:  SPAC458.07 SPAPYUG7.01
  Ecu:  ECU07g0220
_______

[J] COG1676 tRNA splicing endonuclease
  Afu:  AF0900
  Hbs:  VNG2210G
  Mac:  MA3624
  Mth:  MTH250
  Mja:  MJ1424
  Mka:  MK0341 MK0397
  Tac:  Ta1191
  Tvo:  TVN0400
  Pho:  PH0295
  Pab:  PAB1099
  Pya:  PAE0789 PAE2269
  Sso:  SSO0281 SSO0439
  Ape:  APE0685 APE1646
  Sce:  YAR008w YLR105c
  Spo:  SPBC19C7.07c
  Ecu:  ECU03g0920
_______

[NU] COG1677 Flagellar hook-basal body protein
  Aae:  aq_1182a
  Tma:  TM1366
  Cac:  CAC2163
  Lin:  lin0720
  Bsu:  BS_fliE
  Bha:  BH2459
  Eco:  fliE
  EcZ:  ZfliE
  Ecs:  ECs2676
  Ype:  YPO0713 YPO1831
  Sty:  STM1968
  Buc:  BU072
  Vch:  VC2134
  Pae:  PA1100
  Rso:  RSp0389
  Hpy:  HP1557
  jHp:  jhp1465
  Cje:  Cj0526c
  Atu:  AGc974
  Sme:  SMc03029
  Bme:  BMEII1087
  Mlo:  mlr2913
  Ccr:  CC0955
  Tpa:  TP0398
  Bbu:  BB0292
_______

[K] COG1678 Putative transcriptional regulator
  Dra:  DR0357
  Cgl:  Cgl3023
  Mtu:  Rv0038
  MtC:  MT0043
  Mle:  ML0028
  Eco:  yqgE
  EcZ:  ZyqgE
  Ecs:  ECs3824
  Ype:  YPO0936
  Sty:  STM3096
  Vch:  VC0467
  Pae:  PA0405
  Hin:  HI0304
  Pmu:  PM1869
  Xfa:  XF2228
  Nme:  NMB1336
  NmA:  NMA1550
  Rso:  RSc0675
  Atu:  AGc1427
  Sme:  SMc00019
  Bme:  BMEI1454
  Mlo:  mlr7511
  Ccr:  CC3395
  Rpr:  RP032
  Rco:  RC0043
  Ctr:  CT211
  Cpn:  CPn0139
_______

[S] COG1679 Uncharacterized conserved protein
  Afu:  AF2333
  Mac:  MA0245
  Mth:  MTH1421
  Mja:  MJ1313
  Mka:  MK1639
  Pho:  PH0354
  Pab:  PAB1061
  Pya:  PAE2233
  Ape:  APE2087
  Pae:  PA1259_2
  Atu:  AGl398_2
  Sme:  SMb20269_2
  Mlo:  mll1737
_______

[V] COG1680 Beta-lactamase class C and other penicillin binding proteins
  Mac:  MA1345 MA2941
  Pho:  PH0142
  Pab:  PAB0087
  Pya:  PAE3237
  Ape:  APE0338
  Dra:  DR0760 DRA0216 DRA0218
  Cac:  CAC0181 CAC2808
  Cgl:  Cgl2206 Cgl2363
  Mtu:  Rv0399c Rv0907 Rv1367c Rv1497 Rv1723 Rv1730c Rv1922
        Rv1923 Rv2257c Rv2463 Rv3775
  MtC:  MT0409 MT0930 MT1414 MT1545 MT1764 MT1771 MT1973
        MT1974 MT2318 MT2538 MT3884
  Mle:  ML0119 ML1782
  Lla:  L114054
  Spy:  SPy1850
  Spn:  SP1448
  Sau:  SA0909 SA2230
  Lin:  lin0544 lin1811 lin2030
  Bsu:  BS_pbpE BS_pbpX BS_ybbE
  Bha:  BH0715 BH2267
  Syn:  sll1167 slr1924
  Nos:  all2656 alr0153
  Eco:  ampC ampH yfeW
  EcZ:  Z3695 ZampC ZyaiH
  Ecs:  ECs0426 ECs3301 ECs5131
  Ype:  YPO1224
  Sty:  STM0375 STM2478
  Pae:  PA1047 PA1797 PA2228 PA2315 PA4110 PA4347 PA5542
  Xfa:  XF1621
  Rso:  RSc1765 RSp0263 RSp0264
  Atu:  AGc1692 AGc3509 AGc4566 AGl3464 AGpA368 AGpA373
  Sme:  SMb20965 SMb21600 SMc01849
  Bme:  BMEI0945 BMEII0318 BMEII0319 BMEII0350
  Mlo:  mll1578 mll2003 mll2882 mll2884 mll6665 mll7242 mlr6813
  Ccr:  CC0255 CC0575_1 CC0869 CC1502 CC1567 CC1568 CC1706
        CC2105 CC3086 CC3190 CC3489 CC3628
  Rpr:  RP259
  Rco:  RC0345
_______

[N] COG1681 Archaeal flagellins
  Afu:  AF1054 AF1055
  Hbs:  VNG0960G VNG0961G VNG0962G VNG1008G VNG1009G VNG1181G
  Mac:  MA3061 MA3062 MA3077
  Mja:  MJ0891 MJ0892 MJ0893
  Tac:  Ta0553 Ta1407m
  Tvo:  TVN0607 TVN1426
  Pho:  PH0546 PH0548 PH0549 PH0550 PH0551
  Pab:  PAB1378 PAB1379 PAB1380
  Sso:  SSO2323
  Ape:  APE1905 APE1907
_______

[GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component
  Afu:  AF0042 AF0289
  Mac:  MA1176
  Aae:  aq_1095
  Cac:  CAC2329
  Cgl:  Cgl0202
  Mtu:  Rv3783
  MtC:  MT3892
  Mle:  ML0112
  Lla:  L138756 L3425
  Spy:  SPy0789
  Sau:  SA0594
  Lin:  lin1062
  Bsu:  BS_tagG
  Bha:  BH3660
  Syn:  sll0574 slr0977 slr2107
  Nos:  all0917 alr4485
  Sty:  STM0722
  Vch:  VC0246
  Pae:  PA2678 PA5451
  Pmu:  PM0780
  Xfa:  XF2567
  Nme:  NMB0073
  NmA:  NMA0196
  Cje:  Cj1448c
  Sme:  SMb20822 SMb20833
  Bme:  BMEI1415
  Mlo:  mll7565
  Ccr:  CC0635
  Rpr:  RP004
  Rco:  RC0004
_______

[S] COG1683 Uncharacterized conserved protein
  Mac:  MA4104_1
  Mth:  MTH903_1
  Aae:  aq_978
  Tma:  TM0410
  Fnu:  FN1602
  Cac:  CAC2339
  Lin:  lin2433
  Bsu:  BS_ybbK
  Bha:  BH2059
  Sty:  STM1389_1
  Vch:  VCA0055_1
  Pae:  PA0312 PA4658_1
  Rso:  RSc1374
  Atu:  AGc1146_2
  Sme:  SMc00850
  Mlo:  mll0105
_______

[NU] COG1684 Flagellar biosynthesis pathway, component FliR
  Aae:  aq_1961
  Tma:  TM0910
  Cac:  CAC2148_1
  Lin:  lin0686
  Bsu:  BS_fliR
  Bha:  BH2440
  Eco:  fliR
  EcZ:  ZfliR
  Ecs:  ECs2689
  Ype:  YPO0707 YPO1819
  Sty:  STM1981
  Buc:  BU084
  Vch:  VC2121
  Pae:  PA1448
  Rso:  RSp0373
  Hpy:  HP0173
  jHp:  jhp0159
  Cje:  Cj1179c
  Atu:  AGc1028
  Sme:  SMc03055
  Bme:  BMEII0168
  Mlo:  mlr2958
  Ccr:  CC1076
  Tpa:  TP0716
  Bbu:  BB0273
_______

[EH] COG1685 Archaeal shikimate kinase
  Afu:  AF0520
  Hbs:  VNG1245C
  Mac:  MA1378
  Mth:  MTH805
  Mja:  MJ1440
  Mka:  MK1610
  Tac:  Ta0283
  Tvo:  TVN1318
  Pab:  PAB0301
  Pya:  PAE1967
  Sso:  SSO0308
  Ape:  APE0572
_______

[M] COG1686 D-alanyl-D-alanine carboxypeptidase
  Fnu:  FN0060
  Cac:  CAC0993 CAC1267 CAC2057 CAC2063
  Cgl:  Cgl0660
  Mtu:  Rv2911 Rv3330
  MtC:  MT2979 MT3433
  Mle:  ML0691
  Lla:  L139168
  Spy:  SPy0292 SPy1093
  Spn:  SP0872
  Sau:  SA0598
  Lin:  lin2897 lin2944
  Bsu:  BS_dacA BS_dacB BS_dacF
  Bha:  BH0021 BH1535 BH1573 BH2877
  Eco:  dacA dacC dacD pbpG
  EcZ:  ZdacA ZdacC ZdacD ZpbpG
  Ecs:  ECs0670 ECs0919 ECs2812 ECs3021
  Ype:  YPO1176 YPO1320 YPO2601
  Sty:  STM0637 STM0863 STM2062 STM2168
  Vch:  VC0947 VCA0270 VCA0870
  Pae:  PA0869 PA3999
  Hin:  HI0029 HI0364
  Pmu:  PM1927
  Xfa:  XF2230
  Nme:  NMB0749 NMB0877
  NmA:  NMA0962 NMA1095
  Rso:  RSc0327 RSc1609
  Atu:  AGc2763 AGc2773 AGc4221 AGl2387
  Sme:  SMc00068 SMc00683 SMc00996 SMc01188
  Bme:  BMEI0035 BMEI0814 BMEI0913 BMEI0914 BMEI0990
  Mlo:  mll0426 mll3581 mlr0666 mlr4960
  Ccr:  CC2161
  Rpr:  RP389
  Rco:  RC0536
  Ctr:  CT551
  Cpn:  CPn0672
  Tpa:  TP0800
  Bbu:  BB0605
_______

[E] COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance)
  Mac:  MA3438
  Fnu:  FN1040
  Cgl:  Cgl0260 Cgl3021
  Bsu:  BS_azlD
  Hin:  HI1737
  Pmu:  PM0423
  Hpy:  HP1330
  jHp:  jhp1250
_______

[L] COG1688 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Afu:  AF1872
  Mac:  MA3666
  Mth:  MTH1087
  Mja:  MJ0382
  Pho:  PH0171 PH0919 PH1249
  Pab:  PAB1687
  Pya:  PAE0209
  Sso:  SSO1400 SSO1441 SSO1998
  Ape:  APE1234
  Aae:  aq_373
  Tma:  TM1800
_______

[S] COG1689 Uncharacterized protein conserved in archaea
  Afu:  AF1543
  Mth:  MTH762
  Pho:  PH1420
  Pab:  PAB0502
_______

[S] COG1690 Uncharacterized conserved protein
  Afu:  AF0862
  Hbs:  VNG1454C
  Mac:  MA0266
  Mth:  MTH1597
  Mja:  MJ0682_1 MJ0682_3
  Mka:  MK1682_1 MK1682_3
  Tac:  Ta0279
  Tvo:  TVN1322
  Pho:  PH1602_1 PH1602_3
  Pab:  PAB0383_1 PAB0383_3
  Pya:  PAE0998
  Sso:  SSO0966
  Ape:  APE1758
  Ecu:  ECU01g1120
  Aae:  aq_032
  Tma:  TM1357
  Dra:  DR0430
  Cac:  CAC3383
  Cgl:  Cgl2945
  Mtu:  Rv2631
  MtC:  MT2707
  Bha:  BH1789
  Nos:  all3526
  Eco:  rtcB ykfJ
  EcZ:  Z0296 ZrtcB
  Ecs:  ECs0262 ECs4264
  Sty:  STM3519
  Pae:  PA4583 PA5471
  Rso:  RSc0224 RSp0700
_______

[R] COG1691 NCAIR mutase (PurE)-related proteins
  Afu:  AF1275
  Mac:  MA0428
  Mth:  MTH1286
  Mja:  MJ0165
  Mka:  MK0675
  Tma:  TM0965
  Cac:  CAC0776
  Cgl:  Cgl2417_2
  Syn:  sll1489
  Nos:  alr3885
_______

[S] COG1692 Uncharacterized protein conserved in bacteria
  Aae:  aq_1794
  Fnu:  FN1609
  Dra:  DR1281
  Sau:  SA1130
  Lin:  lin1438
  Bsu:  BS_ymdB
  Bha:  BH2376
  Atu:  AGl2208
  Sme:  SMc03973
  Bme:  BMEI0316
  Mlo:  mll3953
  Ccr:  CC3244
  Bbu:  BB0471 BB0505
  Uur:  UU500
  Mpu:  MYPU_6710
  Mpn:  MPN349
  Mge:  MG246
_______

[S] COG1693 Uncharacterized protein conserved in archaea
  Afu:  AF2227
  Mac:  MA0822 MA4404
  Mth:  MTH1569
  Mja:  MJ0159
  Mka:  MK0337
_______

[R] COG1694 Predicted pyrophosphatase
  Afu:  AF0060 AF0660 AF0820 AF1178
  Mac:  MA0540
  Mka:  MK0452 MK0741_2 MK1049
  Pho:  PHS001 PHS025
  Pab:  PAB3022 PAB3319
  Pya:  PAE1159
  Sso:  SSO12199
  Ape:  APE0620a
  Aae:  aq_342
  Tma:  TM0360 TM0913
  Fnu:  FN1948
  Dra:  DR1022_2 DR1183
  Cac:  CAC1930
  Cgl:  Cgl0945
  Mtu:  Rv1021
  MtC:  MT1049
  Lla:  L76848
  Sau:  SA1292
  Lin:  lin2022 lin2253 lin2255
  Bsu:  BS_ypjD BS_yvdC
  Bha:  BH1679 BH3997
  Syn:  sll1005
  Nos:  alr0512
  Eco:  mazG
  EcZ:  ZmazG
  Ecs:  ECs3641
  Ype:  YPO3378
  Sty:  STM2954
  Vch:  VC2450 VCA0485
  Pae:  PA0935 PA4789
  Hin:  HI0460
  Pmu:  PM1285
  Xfa:  XF0186
  Atu:  AGc1386 AGc2679
  Sme:  SMc01051 SMc01191
  Bme:  BMEI0920
  Mlo:  mll0404
  Ccr:  CC1747
  Rco:  RC0788
  Ctr:  CT255
  Cpn:  CPn0401
  Tpa:  TP0778
  Bbu:  BB0760
_______

[K] COG1695 Predicted transcriptional regulators
  Afu:  AF1542 AF2203
  Hbs:  VNG0258H VNG0751C VNG1426H VNG1786H VNG2020C VNG6027G VNG6048H
        VNG6126H VNG6239G VNG6478H VNG7023 VNG7102
  Mac:  MA2093
  Mth:  MTH1488 MTH281
  Tac:  Ta0346 Ta0868m Ta1061m Ta1496
  Tvo:  TVN0516 TVN0934 TVN1265 TVN1493
  Pho:  PH0914
  Pab:  PAB0331 PAB1922 PAB7338
  Pya:  PAE0013 PAE1218 PAE1760
  Sso:  SSO0038 SSO0049 SSO0994 SSO2138
  Ape:  APE0002 APE1360
  Tma:  TM0286 TM0937
  Fnu:  FN0196
  Dra:  DR0374 DR1042 DR1739 DR1846 DR1954 DR2079 DR2629
        DRA0059
  Cac:  CAC0571 CAC0832 CAC0949 CAC3370 CAP0108 CAP0153
  Cgl:  Cgl0834 Cgl2331 Cgl2921
  Mtu:  Rv0047c Rv1176c Rv3488
  MtC:  MT0053 MT1213 MT3592
  Mle:  ML2313 ML2691
  Lla:  L108503 L128255 L9255
  Spy:  SPy2172
  Spn:  SP0100 SP0789
  Sau:  SA2484
  Lin:  lin0442 lin0608 lin0727 lin1176 lin1445
  Bsu:  BS_yfiO
  Bha:  BH0406 BH0575 BH0717 BH3361 BH3951 BH3981
  Nos:  all4972 alr2018 alr3979
  Eco:  yqjI
  EcZ:  ZyqjI
  Ecs:  ECs3953
  Ype:  YPO0864
  Sty:  STM3215
  Vch:  VC2647
  Rso:  RSp0258 RSp0309
  Mlo:  mll2459 mll2486
  Ccr:  CC2969 CC3183 CC3408 CC3691
_______

[M] COG1696 Predicted membrane protein involved in D-alanine export
  Sce:  YGL084c YPL189w
  Spo:  SPAC24H6.01c SPAPB21F2.01
  Fnu:  FN1672
  Cac:  CAC1564
  Lla:  L90287
  Spy:  SPy1311
  Spn:  SP2175
  Sau:  SA0794
  Lin:  lin0972
  Bsu:  BS_dltB
  Nos:  alr4060 alr4864
  Pae:  PA3548
  Nme:  NMB1273
  NmA:  NMA1478
  Hpy:  HP0855
  Cje:  Cj0611c
  Sme:  SMb20843 SMc01551
  Tpa:  TP0566
_______

[L] COG1697 DNA topoisomerase VI, subunit A
  Afu:  AF0940
  Hbs:  VNG0884G
  Mac:  MA1586
  Mth:  MTH1008
  Mja:  MJ0369
  Mka:  MK0512
  Pho:  PH1563
  Pab:  PAB2411
  Pya:  PAE2219
  Sso:  SSO0969
  Ape:  APE0703
  Sce:  YHL022c
  Spo:  SPAC17A5.11
  Ecu:  ECU04g1110
_______

[S] COG1698 Uncharacterized protein conserved in archaea
  Afu:  AF2370a
  Mac:  MA0092
  Mth:  MTH1407
  Mja:  MJ1419
  Mka:  MK1586
  Tac:  Ta0600
  Tvo:  TVN0626
  Pho:  PHS059
  Pab:  PAB1112
  Sso:  SSO6503
  Ape:  APES069
_______

[S] COG1699 Uncharacterized protein conserved in bacteria
  Tma:  TM0081
  Cac:  CAC2210
  Bsu:  BS_yviF
  Bha:  BH3618
  Hpy:  HP1154 HP1377
  jHp:  jhp1081 jhp1291
  Cje:  Cj1075
  Tpa:  TP0658
  Bbu:  BB0183
_______

[S] COG1700 Uncharacterized conserved protein
  Mth:  MTH502
  Pho:  PH0872
  Aae:  aq_645
_______

[S] COG1701 Uncharacterized protein conserved in archaea
  Afu:  AF0927
  Hbs:  VNG0250C
  Mac:  MA1278
  Mth:  MTH435
  Mja:  MJ0209
  Mka:  MK0712
  Pho:  PH1470
  Pab:  PAB1906
  Pya:  PAE3406
  Sso:  SSO2399
  Ape:  APE1937
_______

[T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase
  Mka:  MK0766
  Pya:  PAE1920
  Ape:  APE2464
  Aae:  aq_1351
  Tma:  TM1507
  Dra:  DR1988
  Cgl:  Cgl2236
  Mtu:  Rv2368c
  MtC:  MT2437
  Mle:  ML0627
  Lla:  L92886
  Spy:  SPy0471
  Spn:  SP0948
  Sau:  SA1400
  Lin:  lin1504
  Bsu:  BS_phoH
  Bha:  BH1361
  Syn:  slr2047
  Nos:  alr1956
  Eco:  phoH ybeZ
  EcZ:  ZphoH ZybeZ
  Ecs:  ECs0698 ECs1266
  Ype:  YPO1957 YPO2619
  Sty:  STM0669 STM1126
  Vch:  VC0961
  Pae:  PA3981
  Pmu:  PM1046
  Xfa:  XF0904
  Nme:  NMB0845
  NmA:  NMA1056
  Rso:  RSc0530
  Atu:  AGc625
  Sme:  SMc01114
  Bme:  BMEI1975
  Mlo:  mlr5535
  Ccr:  CC0055 CC2644
_______

[E] COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family
  Afu:  AF1289
  Hbs:  VNG0674C
  Tac:  Ta0464
  Tvo:  TVN0774
  Pho:  PH0274
  Pab:  PAB2398
  Sso:  SSO2265
  Ape:  APE1683
  Dra:  DR1060 DR1747
  Cgl:  Cgl1491
  Mtu:  Rv1496
  MtC:  MT1543
  Mle:  ML1798
  Bha:  BH2954 BH3796_2
  Eco:  argK
  EcZ:  ZygfD
  Ecs:  ECs3788
  Rso:  RSc0237_2
  Ccr:  CC2483
_______

[S] COG1704 Uncharacterized conserved protein
  Mac:  MA2664
  Mja:  MJ1576
  Tma:  TM0961
  Fnu:  FN1125
  Spy:  SPy0330
  Spn:  SP1284
  Lin:  lin0961
  EcZ:  Z4090
  Ecs:  ECs3634
  Ype:  YPO2732
  Pae:  PA0537 PA4369
  Pmu:  PM0785
  Rso:  RSc0664
  Atu:  AGc1138
  Sme:  SMc00853
  Bme:  BMEI0228
  Mlo:  mll4130
  Ccr:  CC3455
  Tpa:  TP0571
  Uur:  UU325
  Mpu:  MYPU_7580
_______

[NU] COG1705 Muramidase (flagellum-specific)
  Tma:  TM0633
  Lla:  L127411_1 L159324_1 L2183 L68758_1
  Spy:  SPy0710_1 SPy0856 SPy0857 SPy1438_1 SPy1764
  Sau:  SA2437_1
  Lin:  lin1064_1 lin1178 lin1179 lin2306 lin2738_1 lin2838_1
  Bsu:  BS_yubE
  Eco:  flgJ_2
  EcZ:  ZflgJ_2
  Ecs:  ECs1459_2
  Ype:  YPO1807_2
  Sty:  STM1182_2
  Vch:  VC2192_2
  Pae:  PA1085_2
  Rso:  RSp0350_2
  Bme:  BMEI1692_1
_______

[N] COG1706 Flagellar basal-body P-ring protein
  Aae:  aq_1713
  Tma:  TM1539
  Eco:  flgI
  EcZ:  ZflgI
  Ecs:  ECs1458
  Ype:  YPO0730 YPO1806
  Sty:  STM1181
  Buc:  BU344
  Vch:  VC2193
  Pae:  PA1084
  Rso:  RSp0349
  Hpy:  HP0246
  jHp:  jhp0231
  Cje:  Cj1462
  Atu:  AGc970
  Sme:  SMc03032
  Bme:  BMEII1084
  Mlo:  mlr2918
  Ccr:  CC2582
  Bbu:  BB0772
_______

[R] COG1707 ACT domain-containing protein
  Afu:  AF1403
  Mth:  MTH1235
  Mja:  MJ1458
  Mka:  MK0609
_______

[R] COG1708 Predicted nucleotidyltransferases
  Afu:  AF0259 AF0299 AF0594 AF0614 AF0948 AF1586 AF1613
        AF1774_2 AF2168 AF2304 AF2432
  Mac:  MA0099 MA0173 MA1512 MA1647 MA1853 MA2618 MA4418
  Mth:  MTH305 MTH408 MTH464
  Mja:  MJ0141 MJ0604 MJ1305 MJ1547
  Mka:  MK1137 MK1285 MK1292_1 MK1307
  Pho:  PH0403 PH0458 PH0696
  Pab:  PAB0898 PAB0900 PAB1403 PAB1545 PAB2340
  Pya:  PAE0028_2 PAE0045 PAE0166 PAE0167 PAE0273_2 PAE0401 PAE0905
        PAE1153 PAE1311 PAE1313 PAE1320 PAE1893 PAE1903 PAE1951
        PAE2034 PAE2506_2 PAE2546 PAE2551 PAE2760 PAE2784
  Sso:  SSO1160 SSO1251 SSO1471 SSO1640 SSO1673 SSO1835 SSO1884
        SSO2107 SSO2529 SSO2781 SSO2952
  Ape:  APE0010_2 APE0761 APE1270
  Aae:  aq_507
  Tma:  TM0614 TM0617 TM1001
  Cac:  CAC2298
  Sau:  SA0049 SA0765 SA1481 SA1952 SA2385
  Sty:  STM1264
  Pae:  PA1406
  Hin:  HI0073
  Atu:  AGl53 AGl62 AGpA170
  Sme:  SMa0967 SMa2315 SMa2317 SMb20835
  Rco:  RC0927
_______

[K] COG1709 Predicted transcriptional regulator
  Afu:  AF2414
  Hbs:  VNG1616C
  Mac:  MA4040
  Mja:  MJ1545
  Mka:  MK1380
  Tac:  Ta1282m
  Tvo:  TVN0514
  Pho:  PH1471
  Pab:  PAB0475
  Pya:  PAE1638
  Sso:  SSO0387
  Ape:  APE0197
_______

[S] COG1710 Uncharacterized protein conserved in archaea
  Mth:  MTH589
  Mja:  MJ1475
  Pho:  PH1560
  Pab:  PAB2413
_______

[S] COG1711 Uncharacterized protein conserved in archaea
  Afu:  AF1332
  Hbs:  VNG1471C
  Mac:  MA0647
  Mth:  MTH1311
  Tac:  Ta1042
  Tvo:  TVN0553
  Pho:  PH0666
  Pab:  PAB1466
_______

[R] COG1712 Predicted dinucleotide-utilizing enzyme
  Afu:  AF1838
  Mac:  MA0958
  Mth:  MTH973
  Mja:  MJ0915
  Mka:  MK0094
  Pya:  PAE3114_2
  Tma:  TM1643
  Pae:  PA3505
  Rso:  RSp0722
_______

[H] COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism
  Tma:  TM1648
  Fnu:  FN0607
  Dra:  DR2582
  Cac:  CAC1263 CAC2809
  Lla:  L132126 L26998
  Spy:  SPy0309
  Spn:  SP1746
  Sau:  SA1421
  Lin:  lin1522
  Bsu:  BS_yqeK
  Bha:  BH0435 BH1327
  Syn:  slr1885
  Tpa:  TP0740
  Uur:  UU469_2
  Mpu:  MYPU_3350_2
  Mpn:  MPN336_2
  Mge:  MG240_2
_______

[S] COG1714 Predicted membrane protein/domain
  Mth:  MTH204_1
  Mka:  MK0408
  Cac:  CAC2792
  Mtu:  Rv0176 Rv1078 Rv3695
  MtC:  MT0185 MT1109 MT3797
  Mle:  ML2312 ML2395_2 ML2596
  Lin:  lin1626
  Bsu:  BS_yckC BS_yczC BS_yteJ BS_yxaI
  Bha:  BH0734 BH3197 BH3357
  Syn:  slr0254
  Nos:  all1806
  Vch:  VC0842 VC2498
  Pae:  PA3826 PA4318
  Hin:  HI1560
  Nme:  NMB0710 NMB2078
  NmA:  NMA0353 NMA0915
  Rso:  RSc2081
  Hpy:  HP1217 HP1258
  jHp:  jhp1139 jhp1179
  Cje:  Cj0232c Cj1251
  Atu:  AGc2148
  Sme:  SMc01765
  Bme:  BMEI1198
  Mlo:  mll8330 mll8365
  Ccr:  CC0498 CC0569
  Rpr:  RP437
  Rco:  RC0608
_______

[V] COG1715 Restriction endonuclease
  Hbs:  VNG6371G
  Mac:  MA4541
  Mth:  MTH1210
  Dra:  DR0508 DR0587
  Mtu:  Rv2528c
  MtC:  MT2603
  Nos:  alr7132 alr7202
  Eco:  mrr
  Sty:  STM4527
_______

[T] COG1716 FOG: FHA domain
  Pya:  PAE0816 PAE1161
  Sso:  SSO1088
  Sce:  YDR200c_1 YHR115c YLR238w_1 YNL116w
  Spo:  SPAC17G8.10c SPBC3H7.13
  Dra:  DRA0333_2
  Cac:  CAC0036 CAC0039_1 CAC0406 CAC0408_1 CAC0504
  Cgl:  Cgl0046 Cgl0047_2 Cgl1406
  Mtu:  Rv0019c Rv0020c_2 Rv1267c_2 Rv1747_1 Rv1827 Rv3360 Rv3863
  MtC:  MT0022 MT0023_2 MT1305_2 MT1789_1 MT1875 MT3428_2 MT3468
        MT3977
  Mle:  ML0021 ML0022_2 ML2076
  Bha:  BH1777_1
  Syn:  sll0778_1 sll1895_1 slr0298 slr1102_1 slr1103_1 slr1104_1 slr1686
        slr1951 slr1991_1
  Nos:  all0156 all0743_1 all1175_1 all3776 all4083 alr0548_1 alr1603
        alr3269 alr4954_1
  Xfa:  XF1272
  Ctr:  CT664_2
  Cpn:  CPn0712_2
_______

[J] COG1717 Ribosomal protein L32E
  Afu:  AF1908
  Hbs:  VNG1711G_2
  Mac:  MA1089
  Mth:  MTH20
  Mja:  MJ0472
  Mka:  MK1225
  Tac:  Ta1254
  Tvo:  TVN0342
  Pho:  PH1761
  Pab:  PAB2133
  Pya:  PAE2099
  Sso:  SSO0701
  Ape:  APE0349
  Sce:  YBL092w
  Spo:  SPAC3H5.10 SPBC16C6.11
  Ecu:  ECU04g1310
_______

[TD] COG1718 Serine/threonine protein kinase involved in cell cycle control
  Afu:  AF1804
  Hbs:  VNG2233C
  Mac:  MA0894
  Mth:  MTH1005
  Mja:  MJ0444
  Mka:  MK0514 MK1399
  Tac:  Ta0396m
  Tvo:  TVN1177
  Pho:  PH1567
  Pab:  PAB0405
  Pya:  PAE3474
  Sso:  SSO2374
  Ape:  APE0751
  Sce:  YOR119c
  Spo:  SPAC10F6.10
  Ecu:  ECU05g1070
  Dra:  DR2209
  Ype:  YPO1734
  Pae:  PA4780
_______

[R] COG1719 Predicted hydrocarbon binding protein (contains V4R domain)
  Mac:  MA1458_2 MA4051
  Mth:  MTH1349_2 MTH842
  Mja:  MJ0150 MJ0716m MJ0739 MJ0745 MJ0855 MJ1460 MJ1642
  Mka:  MK0542_2 MK0629 MK0630 MK0632 MK0785 MK1078 MK1107
        MK1511
  Aae:  aq_1655
  Syn:  slr0144 slr0147
_______

[S] COG1720 Uncharacterized conserved protein
  Afu:  AF0241 AF0433_1
  Hbs:  VNG1115H
  Mac:  MA0382
  Mth:  MTH1797
  Mja:  MJ1583
  Mka:  MK0151
  Pho:  PH1056
  Pab:  PAB0452 PAB1744
  Pya:  PAE2456 PAE3010
  Sso:  SSO3170
  Ape:  APE0313
  Tma:  TM0188
  Eco:  yaeB
  EcZ:  Z0207
  Ecs:  ECs0197
  Ype:  YPO1069
  Sty:  STM0243
  Vch:  VC0876
  Pae:  PA3388
  Hin:  HI0510
  Pmu:  PM1170
  Nme:  NMB2158
  NmA:  NMA0245
  Mlo:  mlr1590
  Ccr:  CC0120
_______

[R] COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
  Afu:  AF2424
  Hbs:  VNG0222C
  Mac:  MA2843 MA3147
  Tac:  Ta0919
  Tvo:  TVN1064
  Pho:  PH0331 PH0387 PH0774
  Pab:  PAB0849 PAB1277 PAB1297
  Pya:  PAE2038
  Ape:  APE0129 APE1319
  Aae:  aq_1508
  Tma:  TM1133
  Dra:  DR0620_1 DR0919
  Mtu:  Rv1480 Rv3163c Rv3693
  MtC:  MT1527 MT3252 MT3795
  Mle:  ML1809
  Lin:  lin0470
  Bsu:  BS_yeaD
  Bha:  BH0605 BH0732
  Syn:  slr1927 slr2013
  Nos:  alr4064 alr5035
  Vch:  VCA0174
  Pae:  PA2874 PA3071 PA4323
  Rso:  RSp0110
  Atu:  AGc4100
  Sme:  SMc02704
  Bme:  BMEI0459
  Mlo:  mll8332 mlr2732
  Ccr:  CC0567 CC2827
  Bbu:  BB0175
_______

[L] COG1722 Exonuclease VII small subunit
  Tma:  TM1769
  Fnu:  FN1328
  Dra:  DR2586
  Cac:  CAC2081
  Cgl:  Cgl0995
  Mtu:  Rv1107c
  MtC:  MT1138
  Mle:  ML1941
  Lla:  L0255
  Spy:  SPy1499
  Spn:  SP1206
  Sau:  SA1353
  Lin:  lin1399
  Bsu:  BS_yqiC
  Bha:  BH2782
  Nos:  asl1773
  Eco:  xseB
  EcZ:  ZxseB
  Ecs:  ECs0476
  Ype:  YPO3175
  Sty:  STM0424
  Vch:  VC0891
  Pae:  PA4042
  Hin:  HI1437
  Pmu:  PM0534
  Xfa:  XF0660
  Nme:  NMB0262
  NmA:  NMA2225
  Rso:  RSc2223
  Hpy:  HP1482
  jHp:  jhp1375
  Cje:  Cj1057c
  Atu:  AGc1356
  Sme:  SMc00970
  Bme:  BMEI1503
  Mlo:  msr7470
  Ccr:  CC2070
  Rpr:  RP350
  Rco:  RC0475
_______

[S] COG1723 Uncharacterized conserved protein
  Sce:  YDL001w YDR282c YFR048w
  Spo:  SPAC12G12.15 SPCC5E4.09
  Ecu:  ECU07g1320
  Nos:  alr7352
  Rpr:  RP463
  Rco:  RC0697
  Ctr:  CT472
  Cpn:  CPn0591
_______

[N] COG1724 Predicted periplasmic or secreted lipoprotein
  Mac:  MA0765 MA2135 MA4126
  Tma:  TM1312
  Syn:  slr1999_1 ssr1766
  Nos:  asl1824 asl2714
  Ype:  YPO1818
  jHp:  jhp0961
  Sme:  SMc04441
  Mlo:  msr2149
  Ccr:  CC3184
_______

[K] COG1725 Predicted transcriptional regulators
  Tac:  Ta0736
  Sso:  SSO1589
  Tma:  TM0766
  Cac:  CAC0265 CAC0599
  Cgl:  Cgl2882
  Mtu:  Rv1152
  MtC:  MT1186
  Spy:  SPy1285
  Spn:  SP1714
  Sau:  SA1748
  Lin:  lin0743 lin0909 lin1836 lin2343
  Bsu:  BS_yhcF BS_ytrA
  Bha:  BH0383 BH0651 BH1164 BH2647 BH3492
  Syn:  sll1961
  Nos:  all1076
_______

[C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA
  Ype:  YPO3240
  Vch:  VC2295
  Pae:  PA2999
  Hin:  HI0164
  Pmu:  PM1328
  Nme:  NMB0569
  NmA:  NMA0752
  Ctr:  CT634
  Cpn:  CPn0743
_______

[J] COG1727 Ribosomal protein L18E
  Afu:  AF1127
  Hbs:  VNG1137G
  Mac:  MA0595
  Mth:  MTH38
  Mja:  MJ0193
  Mka:  MK1475
  Tac:  Ta0434
  Tvo:  TVN1134
  Pho:  PH1636
  Pab:  PAB0364
  Pya:  PAE0672
  Sso:  SSO0070
  Ape:  APE1746
  Sce:  YNL301c YOL120c
  Spo:  SPBC11C11.07
  Ecu:  ECU03g1490
_______

[S] COG1728 Uncharacterized protein conserved in bacteria
  Tma:  TM1646
  Cac:  CAC1049
  Bsu:  BS_yaaR
  Bha:  BH1478
  Tpa:  TP0047
  Bbu:  BB0244
_______

[S] COG1729 Uncharacterized protein conserved in bacteria
  Aae:  aq_1247
  Eco:  ybgF
  EcZ:  ZybgF
  Ecs:  ECs0777
  Ype:  YPO1126
  Sty:  STM0750
  Vch:  VC1834
  Pae:  PA0974
  Xfa:  XF1895
  Nme:  NMB1440
  NmA:  NMA1652
  Rso:  RSc0737
  Atu:  AGl2247gl
  Sme:  SMc02941
  Bme:  BMEI0341
  Mlo:  mll3886
  Ccr:  CC3228
  Rpr:  RP230
  Rco:  RC0312
_______

[O] COG1730 Predicted prefoldin, molecular chaperone implicated in de novo protein folding
  Afu:  AF2063
  Hbs:  VNG2465C
  Mac:  MA4110
  Mth:  MTH1609
  Mja:  MJ0648 MJ0952
  Mka:  MK1614
  Tac:  Ta1076m
  Tvo:  TVN0531
  Pho:  PH0527
  Pab:  PAB1006
  Pya:  PAE3099
  Sso:  SSO0349
  Ape:  APE1084
  Sce:  YML094w
  Spo:  SPBC215.02
  Aae:  aq_759
_______

[H] COG1731 Archaeal riboflavin synthase
  Afu:  AF1416
  Mac:  MA1817
  Mth:  MTH134
  Mja:  MJ1184
  Mka:  MK0361
  Pya:  PAE2021
  Sso:  SSO0401
  Ape:  APE0988
_______

[M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
  Afu:  AF0982
  Hbs:  VNG1762G
  Fnu:  FN2009_2
  Dra:  DRA0135
  Cac:  CAC1474 CAC2849_2
  Mtu:  Rv3759c
  MtC:  MT3866
  Lla:  L65675_2
  Spy:  SPy1134_2
  Spn:  SP1860_2
  Sau:  SA0678_2 SA2235
  Lin:  lin1461_2 lin1465
  Bsu:  BS_opuBC BS_opuCC
  Nos:  alr0974
  Eco:  yehZ
  EcZ:  ZyehZ
  Ecs:  ECs3018
  Sty:  STM1493 STM2165
  Pae:  PA3889
  Rso:  RSc2516_1
  Hpy:  HP0818_2
  jHp:  jhp0757_2
  Atu:  AGc337
  Sme:  SMa1462 SMb21144
  Bme:  BMEI1725
  Mlo:  mlr8413
_______

[K] COG1733 Predicted transcriptional regulators
  Afu:  AF0653 AF1807 AF2404
  Hbs:  VNG0704C VNG1405C
  Mac:  MA0333 MA0414 MA1339 MA3166
  Mth:  MTH1285
  Mja:  MJ0361 MJ0925 MJ0944
  Tac:  Ta0131 Ta0320m
  Tvo:  TVN0210 TVN1272
  Sso:  SSO2897 SSO3176
  Ape:  APE2517
  Fnu:  FN0589 FN1232 FN1904
  Dra:  DR1969
  Cac:  CAC0195 CAC0849 CAC1483 CAC2568 CAC2934 CAC3338 CAC3399
        CAC3487 CAC3488 CAC3496
  Cgl:  Cgl1337 Cgl2063
  Mtu:  Rv1725c Rv3095
  MtC:  MT1766 MT3179
  Lla:  L133547 L30878
  Sau:  SA1925
  Lin:  lin0869 lin1183 lin1899
  Bsu:  BS_yckH BS_ydeP BS_ydzF BS_ykvN BS_yodB BS_ytcD BS_yvaP
        BS_yybR
  Bha:  BH0508 BH0655 BH0737 BH1009 BH3303 BH3884
  Syn:  sll1512
  Nos:  alr2106 alr2599
  Eco:  ytfH
  EcZ:  ZytfH
  Ecs:  ECs5189
  Ype:  YPO1646
  Sty:  STM4402
  Vch:  VCA0094
  Pae:  PA0116 PA1374 PA1607 PA2713
  Pmu:  PM1471
  Xfa:  XF0240
  Rso:  RSc0210 RSc0816 RSc2138 RSp0080 RSp0561 RSp0562 RSp0843
        RSp1119
  Cje:  Cj1546 Cj1556
  Atu:  AGc1578 AGc1731 AGc1831 AGc3635 AGpA210 AGpA641
  Sme:  SMa1960 SMb21289 SMc01091 SMc01493 SMc02225 SMc02381
  Mlo:  mll1412 mll2592 mll2818 mll3985 mll4511 mll7749 mlr1855
        mlr1873 mlr2595 mlr2600 mlr3777
  Ccr:  CC0645 CC0895 CC1836 CC2972 CC3112 CC3368
_______

[T] COG1734 DnaK suppressor protein
  Aae:  aq_2095 aq_250
  Cac:  CAC2116
  Bsu:  BS_ylyA BS_yocK BS_yteA
  Bha:  BH2544
  Eco:  dksA ybiI
  EcZ:  ZdksA ZybiI
  Ecs:  ECs0149 ECs0805 ECs0881 ECs1170 ECs1250 ECs3006 ECs4965
  Ype:  YPO3397
  Sty:  PSLT085 STM0186 STM0825 STM2731
  Buc:  BU198
  Vch:  VC0596
  Pae:  PA0612 PA4577 PA4723 PA4870 PA5536
  Hin:  HI0062 HI1497
  Pmu:  PM0863
  Xfa:  XF0991
  Nme:  NMB0056
  NmA:  NMA0213
  Rso:  RSc0046 RSc0188 RSc1511
  Cje:  Cj0125c
  Atu:  AGc2513
  Sme:  SMc00049 SMc00469
  Bme:  BMEI0949
  Mlo:  mll0773
  Ccr:  CC2580
  Rpr:  RP816
  Rco:  RC1267
  Ctr:  CT407
  Cpn:  CPn0534
  Tpa:  TP0096
  Bbu:  BB0168
_______

[R] COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold
  Sso:  SSO2522
  Dra:  DR0930
  Mtu:  Rv0230c
  MtC:  MT0240
  Lin:  lin2797
  Bha:  BH0225 BH0590_1
  Eco:  php
  Sty:  STM3550
  Atu:  AGl3484
  Mlo:  mll7664
  Mpu:  MYPU_5930
  Mpn:  MPN497
_______

[J] COG1736 Diphthamide synthase subunit DPH2
  Afu:  AF1803
  Hbs:  VNG0854C
  Mac:  MA0718
  Mth:  MTH1319
  Mja:  MJ0483
  Mka:  MK1517
  Tac:  Ta0255
  Tvo:  TVN1339
  Pho:  PH1105
  Pab:  PAB0746
  Pya:  PAE2994
  Sso:  SSO0293
  Ape:  APE0447
  Sce:  YIL103w YKL191w
  Spo:  SPBC17D1.02 SPBC3B8.05
  Ecu:  ECU06g1330 ECU07g0980
_______

[K] COG1737 Transcriptional regulators
  Tma:  TM0326 TM1228
  Cac:  CAC0191 CAC0531 CAC1850 CAC3424
  Cgl:  Cgl1422
  Lla:  L147291 L147423 L17893 L192289 L19721 L30185 L47971
        L54944
  Spy:  SPy0259
  Spn:  SP1331 SP1674
  Sau:  SA0187 SA0306 SA2108 SA2115
  Lin:  lin0527 lin2846 lin2909 lin2927
  Bsu:  BS_ybbH BS_yfiA
  Bha:  BH0181 BH2675 BH2940 BH3576
  Eco:  rpiR yebK yfeT yfhH
  EcZ:  Z4381 ZyebK ZyfeT ZyfhH
  Ecs:  ECs2563 ECs3298 ECs3427 ECs3912
  Ype:  YPO1253 YPO2065 YPO2576 YPO2926 YPO3017 YPO3259
  Sty:  STM1127 STM1887 STM2572 STM4417
  Vch:  VC0204 VC1148 VC1775
  Pae:  PA3184 PA5438 PA5506
  Hin:  HI0143
  Pmu:  PM1577 PM1714
  Nme:  NMB1389
  NmA:  NMA1605
  Rso:  RSc0081 RSc1249 RSc1377 RSc1741 RSp1186 RSp1556
  Atu:  AGc3888 AGc4707 AGl711 AGl824 AGpA84
  Sme:  SMa0520 SMb20276 SMb21158 SMc01164 SMc01602 SMc02353 SMc02460
        SMc04363
  Bme:  BMEII0545 BMEII0556 BMEII0573
  Mlo:  mll4983 mlr1883 mlr3078 mlr4153 mlr5989 mlr7253 msl0999
  Ccr:  CC1297
  Mpu:  MYPU_3660 MYPU_7530
_______

[S] COG1738 Uncharacterized conserved protein
  Afu:  AF2110
  Hbs:  VNG2264C
  Mac:  MA0634
  Pya:  PAE0573
  Ape:  APE2110
  Tma:  TM0608 TM0792
  Fnu:  FN1996
  Dra:  DR0380
  Cgl:  Cgl0234
  Sau:  SA1265
  Bsu:  BS_ypdP
  Eco:  yhhQ
  EcZ:  ZyhhQ
  Ecs:  ECs4320
  Ype:  YPO3822
  Sty:  STM3579
  Vch:  VC2706
  Pae:  PA0013
  Hin:  HI0862
  Pmu:  PM1889
  Nme:  NMB0316
  NmA:  NMA2171
  Atu:  AGl2416
  Sme:  SMc00703
  Bme:  BMEI0057
  Mlo:  mlr3554
  Ctr:  CT140
  Cpn:  CPn0217 CPn1045
  Bbu:  BB0050 BB0051
_______

[S] COG1739 Uncharacterized conserved protein
  Hbs:  VNG2298a
  Mac:  MA0784
  Sce:  YCR059c YDL177c
  Spo:  SPAC27E2.02 SPBC14C8.09c
  Tma:  TM1713
  Fnu:  FN1907
  Dra:  DR2203
  Cac:  CAC2296
  Cgl:  Cgl2074
  Lla:  L98095
  Spy:  SPy1617
  Spn:  SP2209
  Sau:  SA0703
  Lin:  lin2660
  Bsu:  BS_yvyE
  Bha:  BH3630
  Eco:  yigZ
  EcZ:  ZyigZ
  Ecs:  ECs4776
  Sty:  STM3985
  Vch:  VC2757
  Pae:  PA0168
  Hin:  HI0722
  Pmu:  PM1497
  Nme:  NMB2153
  NmA:  NMA0240
  Rso:  RSc3277
  Hpy:  HP1485
  jHp:  jhp1378
  Cje:  Cj0429c
  Atu:  AGl1623
  Sme:  SMc01701
  Bme:  BMEII0420
  Bbu:  BB0430
  Uur:  UU262
  Mpu:  MYPU_2760
_______

[C] COG1740 Ni,Fe-hydrogenase I small subunit
  Afu:  AF1381
  Mac:  MA1141 MA1146
  Aae:  aq_660 aq_802 aq_965
  Cac:  CAP0141
  Nos:  all0688
  Eco:  hyaA hybO
  EcZ:  Z4351 ZhyaA
  Ecs:  ECs1128 ECs3882
  Sty:  STM1539 STM1786 STM3150
  Hpy:  HP0631
  jHp:  jhp0574
  Cje:  Cj1267c Cj1399c
_______

[R] COG1741 Pirin-related protein
  Mac:  MA2278
  Tac:  Ta0133m
  Tvo:  TVN0212
  Pya:  PAE2656
  Cac:  CAC1492
  Cgl:  Cgl2315 Cgl2317
  Mtu:  Rv0181c
  MtC:  MT0190
  Syn:  sll1773
  Nos:  all1172 alr1063
  Eco:  yhaK yhhW
  EcZ:  ZyhaK ZyhhW
  Ecs:  ECs3988 ECs4288
  Ype:  YPO2149 YPO3546 YPO3956
  Sty:  STM0951 STM3236 STM3544
  Vch:  VCA0969
  Pae:  PA1205 PA1210 PA2418 PA3240
  Pmu:  PM1685
  Rso:  RSc0377 RSc0541 RSc2208 RSp0444
  Atu:  AGc1354 AGpA278
  Sme:  SMa0352 SMa1262 SMc00971
  Bme:  BMEI1499
  Mlo:  mlr0974 mlr7473
  Ccr:  CC0481 CC1473 CC3178
_______

[S] COG1742 Uncharacterized conserved protein
  Mac:  MA3936
  Mtu:  Rv2639c
  MtC:  MT2717
  Sau:  SA2130
  Bsu:  BS_yfjF
  Bha:  BH2744
  Syn:  sll0793
  Eco:  ynfA
  EcZ:  Z2569
  Ecs:  ECs2288
  Sty:  STM1504
  Pae:  PA3275
  Rso:  RSp1275
  Atu:  AGc1952
  Sme:  SMc02387
  Mlo:  mll7841
  Ccr:  CC1976
_______

[L] COG1743 Adenine-specific DNA methylase containing a Zn-ribbon
  Afu:  AF2345m
  Mka:  MK0317 MK0318 MK1259 MK1289
  Pho:  PH0905
  Pab:  PAB0588
  Ape:  APE0416
  Tma:  TM0987
  Sme:  SMc02154
_______

[R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
  Afu:  AF0890
  Hbs:  VNG0794G VNG0903C
  Pho:  PH1714
  Pab:  PAB0302
  Pya:  PAE3121 PAE3414
  Ape:  APE0061 APE2592
  Tma:  TM0102
  Dra:  DR2070
  Cac:  CAC0702
  Lla:  L61620
  Spy:  SPy0163 SPy1228
  Spn:  SP0845
  Lin:  lin1425
  Bsu:  BS_med BS_yufN
  Bha:  BH1801 BH2889
  Nos:  alr5361
  Pae:  PA0146
  Rso:  RSc2177
  Atu:  AGc200 AGc3292
  Sme:  SMa1507 SMa2129 SMa2361 SMb20127 SMc00242 SMc02884
  Bme:  BMEII0083 BMEII0084 BMEII0702
  Mlo:  mll0501 mll4178 mlr3148 mlr6801 mlr7061
  Tpa:  TP0298 TP0319
  Bbu:  BB0319 BB0382 BB0383 BB0384 BB0385
  Uur:  UU012 UU016 UU226 UU480
  Mpu:  MYPU_3460
  Mpn:  MPN052
  Mge:  MG040
_______

[R] COG1745 Predicted metal-binding protein
  Afu:  AF0738 AF2405
  Hbs:  VNG1086C VNG1263C
  Mac:  MA4634
  Mth:  MTH224
  Mja:  MJ1132 MJ1205
  Mka:  MK0615
_______

[J] COG1746 tRNA nucleotidyltransferase (CCA-adding enzyme)
  Afu:  AF2156
  Hbs:  VNG0137G
  Mac:  MA3559
  Mth:  MTH584
  Mja:  MJ1111
  Mka:  MK1366
  Tac:  Ta1446
  Tvo:  TVN0117
  Pho:  PH0101
  Pab:  PAB0063
  Pya:  PAE3325
  Sso:  SSO1039
  Ape:  APE1791
_______

[S] COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA
  Ctr:  CT636_1
  Cpn:  CPn0741_1
  Tpa:  TP0018
  Bbu:  BB0132_1
_______

[E] COG1748 Saccharopine dehydrogenase and related proteins
  Afu:  AF1588
  Tac:  Ta0681
  Tvo:  TVN1271
  Pho:  PH1688
  Pya:  PAE1554
  Ape:  APE0193m
  Sce:  YNR050c
  Spo:  SPBC3B8.03
  Dra:  DR1252
  Spn:  SP0919
  Bha:  BH3388 BH3957
  Syn:  slr0049
  Nos:  alr1138
  Vch:  VC1624
  Pmu:  PM0372
  Hpy:  HP1507
  jHp:  jhp1400
  Cje:  Cj0172c
  Atu:  AGc1727 AGl1365
  Sme:  SMb21630 SMc02503
  Bme:  BMEI1588
  Mlo:  mlr2199 mlr4469
_______

[N] COG1749 Flagellar hook protein FlgE
  Aae:  aq_1859
  Cac:  CAC2154
  Lin:  lin0705
  Eco:  flgE
  EcZ:  ZflgE
  Ecs:  ECs1454
  Ype:  YPO0725 YPO1802
  Sty:  STM1177
  Buc:  BU340
  Vch:  VC2197
  Pae:  PA1080
  Rso:  RSp0345
  Hpy:  HP0870 HP0908
  jHp:  jhp0804 jhp0844
  Cje:  Cj0043 Cj1729c
  Atu:  AGc1012
  Sme:  SMc03047
  Bme:  BMEII0159
  Mlo:  mlr2937
  Ccr:  CC0902 CC2839
  Tpa:  TP0727
  Bbu:  BB0283
_______

[R] COG1750 Archaeal serine proteases
  Afu:  AF0705
  Mac:  MA0752
  Mja:  MJ1318
  Pho:  PH1442
  Pab:  PAB0498
  Pya:  PAE3507
  Sso:  SSO1464
  Ape:  APE0428 APE2279
_______

[S] COG1751 Uncharacterized conserved protein
  Afu:  AF0103
  Mac:  MA4416
  Mth:  MTH1675
  Mja:  MJ0504
  Tma:  TM0885
_______

[R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily
  Sce:  YKR089c YML059c_2 YMR313c YOR081c
  Spo:  SPAC1786.01c SPAC1A6.05c SPAC31G5.20c SPCC1450.16c SPCC4B3.04c_2
  Ecu:  ECU05g0070_2
  Aae:  aq_1386
  Tma:  TM0712
  Fnu:  FN1704_1
  Mtu:  Rv1062 Rv1063c Rv2037c Rv2565_2 Rv3239c_3 Rv3728_3
  MtC:  MT1092 MT1093 MT2097 MT2641_2 MT3337_3 MT3831_3
  Mle:  ML1423
  Lla:  L148897
  Bsu:  BS_ylbK BS_yqhO
  Bha:  BH2587 BH2805
  Syn:  slr0060
  Eco:  rssA
  EcZ:  Z1214 Z1654 ZychK
  Ecs:  ECs1399 ECs1736 ECs2798
  Sty:  STM1754
  Vch:  VC0603_1
  Pae:  PA1640 PA3241 PA3339_1
  Xfa:  XF0066
  Nme:  NMB2139
  NmA:  NMA0225
  Rso:  RSc0221 RSc0306 RSc1178 RSc2551 RSp1060
  Atu:  AGc1245 AGc3215
  Sme:  SMc00930 SMc01003
  Bme:  BMEI0908 BMEII1035
  Mlo:  mll3840 mlr0925 mlr2398 mlr3635 mlr8257
  Ccr:  CC2171_2 CC3383
  Rpr:  RP534
  Rco:  RC0775
  Tpa:  TP1033
_______

[S] COG1753 Uncharacterized conserved protein
  Afu:  AF1478 AF1481 AF1689 AF1997
  Mac:  MA1514
  Mja:  MJ1122
  Pho:  PHS031
  Pab:  PAB3103
_______

[R] COG1754 Uncharacterized C-terminal domain of topoisomerase IA
  Dra:  DR1374_2
  Cgl:  Cgl0309_2
  Mtu:  Rv3646c_2
  MtC:  MT3749_2
  Mle:  ML0200_2
  Syn:  slr2058_2
  Nos:  alr2780_2
  Xfa:  XF0920_2
  Atu:  AGc2398_2
  Sme:  SMc01364_2
  Bme:  BMEII0666_2
  Mlo:  mlr0839_2
  Ccr:  CC2451_2
  Rpr:  RP326_2
  Rco:  RC0449_2
  Bbu:  BB0828_2
_______

[S] COG1755 Uncharacterized protein conserved in bacteria
  Dra:  DR1745
  Mtu:  Rv1139c
  MtC:  MT1172
  Spy:  SPy1691
  Spn:  SP2191
  Sau:  SA0213
  Bsu:  BS_ypbQ
  Bha:  BH0618
  Hin:  HI0318
  Pmu:  PM0984
  Nme:  NMB0883
  NmA:  NMA1102
_______

[S] COG1756 Uncharacterized conserved protein
  Afu:  AF0734
  Mja:  MJ0557
  Mka:  MK0202
  Tac:  Ta1124m
  Tvo:  TVN1191
  Pho:  PH1379
  Pab:  PAB1852
  Pya:  PAE1979
  Sso:  SSO2226
  Ape:  APE0502
  Sce:  YLR186w
  Spo:  SPAC18G6.07c
  Ecu:  ECU01g0480
_______

[C] COG1757 Na+/H+ antiporter
  Hbs:  VNG0436G VNG1985C VNG2123G VNG2124C VNG6313G
  Pho:  PH1889
  Pab:  PAB2161
  Ape:  APE2538
  Fnu:  FN0352 FN0624 FN0650 FN0978 FN1414 FN1420 FN1422
        FN1860 FN2077
  Cac:  CAC0744 CAP0140
  Sau:  SA2094 SA2117
  Bsu:  BS_mleN BS_nhaC
  Bha:  BH3449 BH3946
  Ype:  YPO0624
  Sty:  STM1556
  Vch:  VC1131 VC2037 VCA0193 VCA0213
  Hin:  HI1107 HI1586
  Pmu:  PM0871
  Nme:  NMB0531 NMB0536
  NmA:  NMA0709 NMA0715
  Hpy:  HP0946
  jHp:  jhp0880
  Cje:  Cj0832c
  Bbu:  BB0637 BB0638
_______

[K] COG1758 DNA-directed RNA polymerase, subunit K/omega
  Afu:  AF1131
  Hbs:  VNG1141G
  Mac:  MA0599
  Mth:  MTH42
  Mja:  MJ0197
  Mka:  MK1580
  Tac:  Ta1160
  Tvo:  TVN1225
  Pho:  PH1631a
  Pab:  PAB7132
  Pya:  PAE3271
  Sso:  SSO6768
  Ape:  APE0914
  Sce:  YPR187w
  Spo:  SPCC1020.04c
  Ecu:  ECU08g0320
  Aae:  aq_183a
  Tma:  TM1688
  Dra:  DR2494
  Cac:  CAC1719
  Cgl:  Cgl1567
  Mtu:  Rv1390
  MtC:  MT1435
  Mle:  ML0542
  Lla:  L149295
  Spy:  SPy1630
  Spn:  SP1737
  Sau:  SA1053
  Lin:  lin1940
  Bsu:  BS_yloH
  Bha:  BH2511
  Syn:  ssl2982
  Nos:  asr4648
  Eco:  rpoZ
  EcZ:  ZrpoZ
  Ecs:  ECs4524
  Ype:  YPO0039
  Sty:  STM3741
  Vch:  VC2709
  Pae:  PA5337
  Hin:  HI1742
  Pmu:  PM0921
  Xfa:  XF1502
  Nme:  NMB1660
  NmA:  NMA1918
  Rso:  RSc2154
  Hpy:  HP0776
  jHp:  jhp0713
  Cje:  Cj1273c
  Atu:  AGc1894
  Sme:  SMc02408
  Bme:  BMEI1297
  Mlo:  mlr7753
  Ccr:  CC1552
  Rpr:  RP578
  Rco:  RC0882
  Tpa:  TP0701
  Bbu:  BB0820
_______

[R] COG1759 ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)
  Afu:  AF0113 AF0256
  Mac:  MA0206 MA3689
  Mth:  MTH1201
  Mja:  MJ0136
  Mka:  MK0588
  Pho:  PH0324 PH1348
  Pab:  PAB0547 PAB1272
  Pya:  PAE0604 PAE0608
  Sso:  SSO0239 SSO0241
_______

[E] COG1760 L-serine deaminase
  Fnu:  FN1106
  Dra:  DR0377 DR0497
  Cac:  CAC0673 CAC0674
  Cgl:  Cgl1607
  Mtu:  Rv0069c
  MtC:  MT0075
  Mle:  ML1755
  Lla:  L43452 L44083
  Spy:  SPy2189 SPy2190
  Spn:  SP0105 SP0106
  Sau:  SA2318 SA2319
  Lin:  lin1926 lin1927
  Bsu:  BS_yloW BS_ylpA
  Bha:  BH2496 BH2497
  Eco:  sdaA sdaB yhaP yhaQ
  EcZ:  Z4464 ZsdaA ZsdaB
  Ecs:  ECs2523 ECs3657 ECs3992
  Ype:  YPO1771
  Sty:  STM1826 STM2196 STM2971 STM3240
  Vch:  VC1300 VCA0666
  Pae:  PA2443 PA5379
  Hin:  HI0288
  Pmu:  PM0036
  Nme:  NMB0211
  NmA:  NMA0057
  Rso:  RSc1099 RSc1100 RSc3296 RSp0045
  Hpy:  HP0132
  jHp:  jhp0120
  Cje:  Cj1624c
  Atu:  AGc3229
  Sme:  SMc01256
  Bme:  BMEI0811
  Mlo:  mll0670
  Ccr:  CC3108
_______

[K] COG1761 DNA-directed RNA polymerase, subunit L
  Afu:  AF0207
  Hbs:  VNG0860G
  Mac:  MA0721
  Mth:  MTH1317
  Mja:  MJ0387
  Mka:  MK0058
  Tac:  Ta1416
  Tvo:  TVN1435
  Pho:  PH0041a
  Pab:  PAB2316
  Pya:  PAE1978
  Sso:  SSO5577
  Ape:  APE0443
  Sce:  YNL113w YOL005c
  Spo:  SPAC1687.01 SPAC3A12.07 SPAPYUL23.01
  Ecu:  ECU05g0275 ECU11g0590
_______

[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
  Fnu:  FN1441_1 FN1491 FN1926_1
  Cac:  CAC0233 CAC2958
  Cgl:  Cgl1891_1 Cgl2978_1
  Lla:  L185031_1
  Spy:  SPy0176 SPy0855_1 SPy1325_2 SPy1711 SPy1952_2
  Spn:  SP0307 SP0645 SP0877_1 SP1198 SP1199 SP1619 SP1620
        SP2036 SP2131_2
  Sau:  SA0235_2 SA0236 SA0320 SA0321_2 SA0655_1 SA2433_2 SA2434_3
  Lin:  lin0325_2 lin0376 lin0421 lin0445_2 lin0446 lin0501_2 lin0503
        lin0871_2 lin0919_2 lin2202 lin2203_2 lin2242 lin2429_1 lin2455_2
        lin2800 lin2801_2 lin2816 lin2817_2 lin2929
  Bsu:  BS_fruA_1 BS_licR_2 BS_yjdC_2 BS_yjdD_3
  Bha:  BH0192 BH0193_2 BH0220_2 BH0221 BH0828_1
  Eco:  cmtB frvA frvR_2 gatA hrsA_1 ptsA_2 ptsN
        ptxA sgcA ypdD_3
  EcZ:  Z3648_3 Z4875 ZcmtB ZfrvA ZfrvR_2 ZgatA ZptsA_2
        ZptsN ZptxA
  Ecs:  ECs2897 ECs3263_3 ECs3809 ECs4083 ECs4350 ECs4823_2 ECs4826
        ECs4877_2 ECs5171
  Ype:  YPO0405_3 YPO2569 YPO3585
  Sty:  STM1616 STM2344 STM3258 STM3322 STM3784 STM4110_3 STM4385
  Vch:  VC1820 VC1822_1 VC1824 VC1826_1 VC2531 VCA0245
  Pae:  PA4464
  Hin:  HI1147
  Pmu:  PM0170 PM0765
  Nme:  NMB0736
  NmA:  NMA0946
  Rso:  RSc0406
  Atu:  AGc576
  Sme:  SMc01141
  Bme:  BMEI1786
  Mlo:  mll3194
  Ccr:  CC3596
  Ctr:  CT290 CT291
  Cpn:  CPn0060 CPn0061
  Tpa:  TP0085 TP0755
  Bbu:  BB0408_1 BB0447_2 BB0629_1
  Mpu:  MYPU_1290_1 MYPU_5960
  Mpn:  MPN078_1 MPN494
  Mge:  MG062_1
_______

[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein
  Afu:  AF2253
  Hbs:  VNG0081G_1 VNG0825C
  Mac:  MA1978_1
  Mth:  MTH1551
  Mja:  MJ1324
  Mka:  MK1080
  Tac:  Ta0039
  Pho:  PH0081
  Pab:  PAB2288
  Pya:  PAE1759
  Sso:  SSO0675
  Ape:  APE0178
  Aae:  aq_1326
  Sau:  SA2067
  Lin:  lin1035
  Bsu:  BS_mobB
  Bha:  BH3020
  Eco:  mobB
  EcZ:  ZmobB
  Ecs:  ECs4779
  Ype:  YPO0012
  Sty:  STM3993
  Vch:  VC1527_1
  Hin:  HI0851
  Pmu:  PM1785
  Rso:  RSc0583 RSp0978
  Cje:  Cj0841c
  Atu:  AGc3121
  Sme:  SMc00142
  Bme:  BMEI1021
  Mlo:  mlr0548
_______

[O] COG1764 Predicted redox protein, regulator of disulfide bond formation
  Tac:  Ta0195
  Tvo:  TVN1401
  Dra:  DR1538 DR1857
  Cgl:  Cgl0024
  Lla:  L183902 L186839 L68759
  Sau:  SA0755 SA1543
  Lin:  lin2302
  Bsu:  BS_yklA BS_ykzA BS_ymaD
  Eco:  osmC
  EcZ:  ZosmC
  Ecs:  ECs2086
  Sty:  STM1563
  Vch:  VCA0330 VCA1006
  Pae:  PA0059 PA2850
  Xfa:  XF1827
  Rso:  RSp0326 RSp1107
  Atu:  AGc1547 AGc1844 AGpA208
  Sme:  SMa2389 SMc00040
  Bme:  BMEII0409
  Mlo:  mll4282 mll6679 mll8194 mlr4254
  Ccr:  CC0916 CC0941
  Mpn:  MPN668
  Mge:  MG454
_______

[O] COG1765 Predicted redox protein, regulator of disulfide bond formation
  Mac:  MA4521
  Mja:  MJ0573
  Mka:  MK1557
  Tac:  Ta1411m
  Tvo:  TVN1430
  Pho:  PH0818 PH1469 PH1621
  Pab:  PAB1905 PAB2001
  Sso:  SSO1056
  Ape:  APE2211
  Aae:  aq_1515 aq_1549
  Tma:  TM0919
  Dra:  DR1177
  Cac:  CAC2245
  Cgl:  Cgl1038 Cgl1404_2
  Mtu:  Rv2923c
  MtC:  MT2992
  Lin:  lin0902 lin1816
  Bha:  BH0885
  Eco:  yhfA
  EcZ:  ZyhfA
  Ecs:  ECs4207
  Ype:  YPO0176
  Sty:  STM3465
  Vch:  VCA0838
  Pae:  PA0653 PA1203
  Nme:  NMB1564
  NmA:  NMA1753
  Rso:  RSc0376 RSc0489
  Atu:  AGc2859
  Sme:  SMa1898_2 SMb20271 SMb21303
  Mlo:  mll0741
  Ccr:  CC2998
  Mpn:  MPN625
  Mge:  MG427
_______

[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein
  Aae:  aq_1182
  Tma:  TM0221
  Cac:  CAC2162
  Lin:  lin0721
  Bsu:  BS_fliF
  Bha:  BH2458
  Eco:  fliF
  EcZ:  ZfliF
  Ecs:  ECs2677
  Ype:  YPO0714 YPO1830
  Sty:  STM1969
  Buc:  BU073
  Vch:  VC2133
  Pae:  PA1101
  Rso:  RSp0390
  Hpy:  HP0351
  jHp:  jhp0325
  Cje:  Cj0318
  Atu:  AGc922
  Sme:  SMc03014
  Bme:  BMEII0151 BMEII0152
  Mlo:  mlr2928
  Ccr:  CC0905
  Tpa:  TP0399
  Bbu:  BB0291
_______

[H] COG1767 Triphosphoribosyl-dephospho-CoA synthetase
  Afu:  AF1835
  Mac:  MA0694
  Mth:  MTH743
  Mja:  MJ0227
  Mka:  MK0196 MK0876
  Pho:  PH1702
  Pab:  PAB0313
  Sso:  SSO0212
  Ape:  APE1715
  Fnu:  FN1377
  Spy:  SPy1178
  Eco:  citG
  EcZ:  ZcitG
  Ecs:  ECs0652
  Sty:  STM0063 STM0619 STM0769 STM3350
  Vch:  VC0801
  Pae:  PA0209
  Hin:  HI0021_2
_______

[R] COG1768 Predicted phosphohydrolase
  Dra:  DR1119
  Cac:  CAC0640
  Ctr:  CT488
  Cpn:  CPn0606
_______

[L] COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
  Afu:  AF1866
  Aae:  aq_386
  Tma:  TM1793
_______

[E] COG1770 Protease II
  Cgl:  Cgl2542
  Mtu:  Rv0781 Rv0782
  MtC:  MT0805
  Mle:  ML2226
  Spn:  SP1343
  Nos:  alr3911
  Eco:  ptrB
  EcZ:  ZptrB
  Ecs:  ECs2555
  Ype:  YPO1780
  Sty:  STM1879
  Vch:  VCA0063
  Pae:  PA1304
  Xfa:  XF1479
  Atu:  AGc1636
  Sme:  SMc00114
  Bme:  BMEI1365
  Mlo:  mll7643 mlr6087
  Ccr:  CC0936
  Rpr:  RP281
  Rco:  RC0377
_______

[S] COG1771 Uncharacterized protein conserved in archaea
  Mth:  MTH588
  Mja:  MJ1110
  Pho:  PH1562
  Pab:  PAB2412
_______

[S] COG1772 Uncharacterized protein conserved in archaea
  Afu:  AF0407
  Mac:  MA0238
  Mja:  MJ0224
  Mka:  MK0056
  Pho:  PH0591
  Pab:  PAB0965
_______

[C] COG1773 Rubredoxin
  Afu:  AF0341 AF0880 AF1349
  Mth:  MTH1453_1 MTH155 MTH156
  Mja:  MJ0735 MJ0737 MJ0740
  Pab:  PAB7224
  Tma:  TM0659
  Fnu:  FN1424_3
  Cac:  CAC2778
  Mtu:  Rv3250c Rv3251c
  MtC:  MT3348 MT3349
  Syn:  slr2033
  Nos:  alr3843 asl4557
  Eco:  ygaK_2
  EcZ:  Z4018_2
  Ecs:  ECs3566_2
  Sty:  STM1533_2 STM2840_2
  Pae:  PA5350 PA5351
  Xfa:  XF0379
  Nme:  NMB0993
  NmA:  NMA1201
  Rso:  RSc0667
  Ccr:  CC2495
  Tpa:  TP0991
_______

[S] COG1774 Uncharacterized homolog of PSP1
  Sce:  YDR505c_2 YLR177w_2
  Spo:  SPBP7E8.02
  Ecu:  ECU03g0210 ECU06g1580
  Aae:  aq_1527
  Tma:  TM0772
  Fnu:  FN0908
  Dra:  DR2511
  Cac:  CAC0301
  Lla:  L5532
  Sau:  SA0443
  Lin:  lin0206
  Bsu:  BS_yaaT
  Bha:  BH0045
  Tpa:  TP0046
_______

[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
  Afu:  AF1957 AF1958
  Mja:  MJ0007
  Mka:  MK0258
  Fnu:  FN0207 FN0208
  Cac:  CAC3622
  Eco:  yjiM
  EcZ:  ZyjiM
  Ecs:  ECs5298
_______

[NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
  Afu:  AF1039
  Hbs:  VNG0969H VNG0970G VNG1607G
  Mac:  MA0012 MA3065
  Pho:  PH0487 PH0488
  Pab:  PAB1333 PAB1334
  Tma:  TM0680 TM0904
  Cac:  CAC2215_1 CAC2219
  Lin:  lin0708_1
  Bsu:  BS_cheC BS_fliY_1
  Bha:  BH2434 BH2445_1
  Vch:  VC1083 VCA0189_2
  Hpy:  HP1030_1
  jHp:  jhp0394_1
  Cje:  Cj0059c_1
  Tpa:  TP0720_1
_______

[K] COG1777 Predicted transcriptional regulators
  Afu:  AF1298
  Hbs:  VNG1843C
  Mac:  MA4576
  Mth:  MTH1288
  Tac:  Ta0472
  Tvo:  TVN0983
  Pho:  PH0180 PH1744
  Pab:  PAB0108 PAB0208
_______

[R] COG1778 Low specificity phosphatase (HAD superfamily)
  Mac:  MA3766_2
  Aae:  aq_2171
  Fnu:  FN0213
  Eco:  yrbI
  EcZ:  ZyrbI
  Ecs:  ECs4077
  Ype:  YPO3578
  Sty:  STM3316
  Vch:  VC2524
  Pae:  PA4458
  Hin:  HI1679
  Pmu:  PM0524
  Xfa:  XF1412
  Nme:  NMB0353
  NmA:  NMA2134
  Rso:  RSc0412
  Hpy:  HP1570
  jHp:  jhp1478
  Cje:  Cj0647
_______

[R] COG1779 C4-type Zn-finger protein
  Afu:  AF0783
  Mac:  MA3885
  Mth:  MTH1834
  Mja:  MJ0530
  Mka:  MK0032
  Tac:  Ta0101m
  Tvo:  TVN0178
  Pho:  PH1223
  Pab:  PAB1684
  Pya:  PAE1008
  Sso:  SSO2428
  Ape:  APE1949
  Sce:  YGR211w
  Spo:  SPAC15A10.04c
_______

[F] COG1780 Protein involved in ribonucleotide reduction
  Dra:  DRB0107
  Cgl:  Cgl2479
  Mtu:  Rv3052c
  MtC:  MT3138
  Mle:  ML1735
  Lla:  L4702
  Spy:  SPy0426 SPy1984
  Spn:  SP0158
  Sau:  SA0685
  Bsu:  BS_ymaA BS_yosM
  Eco:  nrdI
  EcZ:  ZnrdI
  Ecs:  ECs3537
  Ype:  YPO2650
  Sty:  STM2806
  Atu:  AGc104
  Bme:  BMEII0931
  Mpu:  MYPU_5400
  Mpn:  MPN323
  Mge:  MG230
_______

[F] COG1781 Aspartate carbamoyltransferase, regulatory subunit
  Afu:  AF0107
  Hbs:  VNG6311G
  Mac:  MA4501
  Mth:  MTH850
  Mja:  MJ1406
  Mka:  MK1481
  Tac:  Ta0574
  Tvo:  TVN0632
  Pho:  PH0721
  Pab:  PAB1499
  Pya:  PAE3265
  Sso:  SSO0613
  Ape:  APE1662
  Tma:  TM1642_2
  Cac:  CAC2653
  Eco:  pyrI
  EcZ:  ZpyrI
  Ecs:  ECs5221
  Ype:  YPO3589
  Sty:  STM4459
  Buc:  BU370
  Vch:  VC2511
  Nme:  NMB0107
  NmA:  NMA0167
_______

[R] COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain
  Afu:  AF0482
  Hbs:  VNG0401G
  Mac:  MA3874
  Mth:  MTH1203
  Mja:  MJ1236
  Mka:  MK1227
  Tac:  Ta0613m
  Tvo:  TVN0664
  Pho:  PH1404
  Pab:  PAB1868
  Pya:  PAE0820
  Sso:  SSO0761
  Ape:  APE0522
_______

[R] COG1783 Phage terminase large subunit
  Spy:  SPy0972
  Lin:  lin0105 lin1267
  Bsu:  BS_xtmB BS_yqaT
  Hin:  HI1410
  Bbu:  BBG21
_______

[S] COG1784 Predicted membrane protein
  Afu:  AF2040
  Hbs:  VNG1101C
  Mac:  MA1973
  Mth:  MTH1700
  Mja:  MJ1079
  Mka:  MK0890
  Pho:  PH0189
  Pab:  PAB0115
_______

[P] COG1785 Alkaline phosphatase
  Hbs:  VNG6301G
  Mac:  MA4354
  Pab:  PAB2366
  Sce:  YDR481c
  Spo:  SPBC14F5.13c
  Tma:  TM0156
  Dra:  DRB0046
  Cgl:  Cgl2403
  Sau:  SA2420
  Bsu:  BS_phoA BS_phoB
  Bha:  BH0874
  Nos:  all2843
  Eco:  phoA
  EcZ:  ZphoA
  Ecs:  ECs0433
  Ype:  YPO2298
  Pae:  PA3296
  Xfa:  XF0657
  Rso:  RSc0097 RSc0098
  Bme:  BMEI0790
_______

[S] COG1786 Uncharacterized conserved protein
  Afu:  AF0055
  Mac:  MA0244
  Mth:  MTH1530
  Mja:  MJ1407
  Mka:  MK1486
  Pho:  PH0353
  Pab:  PAB1062
  Pya:  PAE2234
  Ape:  APE2089
  Pae:  PA1259_1
  Atu:  AGl398_1
  Sme:  SMb20269_1
  Mlo:  mll1736
_______

[V] COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
  Tma:  TM0932
  Dra:  DR1877
  Bha:  BH0499
  Syn:  sll1429
  Hpy:  HP1080
  jHp:  jhp0345
_______

[I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
  Afu:  AF1199
  Sso:  SSO1083
  Fnu:  FN0202 FN0272 FN1857
  Dra:  DRA0054_1 DRA0068
  Cac:  CAP0163
  Cgl:  Cgl2339
  Mtu:  Rv2504c Rv3551
  MtC:  MT2579 MT3655
  Spy:  SPy0141 SPy1638
  Bsu:  BS_yodS BS_yxjD
  Bha:  BH2259
  Eco:  atoD
  Pae:  PA0226 PA1999
  Hin:  HI0774
  Rso:  RSc1570 RSc2254
  Hpy:  HP0691
  jHp:  jhp0637
  Atu:  AGl1055GM
  Sme:  SMb20587
  Bme:  BMEII0643 BMEII0644
  Mlo:  mll4183
  Ccr:  CC0206 CC2405
  Rco:  RC0904 RC0905
_______

[S] COG1790 Uncharacterized protein conserved in archaea
  Afu:  AF0426
  Mth:  MTH236
  Mja:  MJ1106
  Mka:  MK0557
_______

[S] COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain
  Sce:  YMR009w
  Spo:  SPBC887.01
  Aae:  aq_1975
  Bsu:  BS_ykrZ
  Nos:  all2724
  Pae:  PA1684
  Xfa:  XF2210
_______

[M] COG1792 Cell shape-determining protein
  Aae:  aq_847
  Fnu:  FN1494 FN1496
  Cac:  CAC1243
  Lla:  L98749
  Spn:  SP2218
  Sau:  SA1475
  Lin:  lin1582
  Bsu:  BS_mreC
  Bha:  BH3030
  Nos:  all0086
  Eco:  mreC
  EcZ:  ZmreC
  Ecs:  ECs4122
  Ype:  YPO3666
  Sty:  STM3373
  Vch:  VC0416
  Pae:  PA4480
  Hin:  HI0038
  Pmu:  PM1956
  Xfa:  XF1310
  Rso:  RSc0060
  Hpy:  HP1372
  jHp:  jhp1286
  Cje:  Cj0277
  Ccr:  CC1544
  Rpr:  RP767
  Rco:  RC1197
  Ctr:  CT638 CT638.1
  Cpn:  CPn0739
  Tpa:  TP0498
  Bbu:  BB0716
_______

[L] COG1793 ATP-dependent DNA ligase
  Afu:  AF0623 AF1725
  Hbs:  VNG0881G
  Mac:  MA0728 MA2571 MA3428
  Mth:  MTH1580
  Mja:  MJ0171
  Mka:  MK0999
  Tac:  Ta1148
  Tvo:  TVN1237
  Pho:  PH1622
  Pab:  PAB2002
  Pya:  PAE0833
  Sso:  SSO0189
  Ape:  APE1094
  Sce:  YDL164c YOR005c
  Spo:  SPAC20G8.01 SPBC713.06 SPCC1183.05c
  Ecu:  ECU02g1220
  Aae:  aq_1394
  Mtu:  Rv0938_2 Rv3062 Rv3731
  MtC:  MT0965_2 MT3148 MT3836
  Bsu:  BS_ykoU_1 BS_yoqV
  Bha:  BH2209_1
  Vch:  VC1542
  Pae:  PA2138_1
  Hin:  HI1182 HI1183
  Nme:  NMB2048
  NmA:  NMA0388
  Cje:  Cj1669c
  Atu:  AGc1536 AGl502_1 AGpA142 AGpA68 AGpA74_1 AGpT171
  Sme:  SMa0414 SMa0417_1 SMa0424 SMb20008 SMb20685_1 SMb20912 SMb21044_1
        SMc03177 SMc03959_1
  Mlo:  mll2077_1 mll4606_1 mll4705 mll5481 mll6696 mll8063 mll9625_1
        mll9685 mlr8042 mlr8107 mlr9524
  Ccr:  CC3610
_______

[M] COG1794 Aspartate racemase
  Afu:  AF1422
  Pho:  PH0670 PH1733
  Pab:  PAB0912 PAB2073
  Lla:  L92665
  Bsu:  BS_racX
  Eco:  ygeA
  EcZ:  ZygeA
  Ecs:  ECs3697
  Ype:  YPO2758
  Sty:  STM3015 STM4510
  Pmu:  PM1626
  Rso:  RSc0212
  Cje:  Cj0085c
  Atu:  AGl1549 AGl3474
  Sme:  SMc01404
  Mlo:  mll4070
  Ccr:  CC2033 CC3278
_______

[S] COG1795 Uncharacterized conserved protein
  Afu:  AF1305_1
  Mac:  MA3006 MA4608_1
  Mth:  MTH1474_1
  Mja:  MJ1447_1
  Mka:  MK1275
  Ype:  YPO2460
_______

[L] COG1796 DNA polymerase IV (family X)
  Mac:  MA0727_1
  Mth:  MTH550_1
  Tac:  Ta0758_1
  Tvo:  TVN0856_1
  Sce:  YCR014c
  Spo:  SPAC2F7.06c
  Aae:  aq_1422_1
  Dra:  DR0467_1
  Sau:  SA0990_1
  Lin:  lin1194_1
  Bsu:  BS_yshC_1
  Bha:  BH3107_1
_______

[H] COG1797 Cobyrinic acid a,c-diamide synthase
  Afu:  AF2229
  Hbs:  VNG1573G
  Mac:  MA0106 MA3626
  Mth:  MTH1460
  Mja:  MJ1421
  Mka:  MK1573 MK1643
  Tac:  Ta1200
  Tvo:  TVN0409
  Pya:  PAE2587
  Sso:  SSO0404
  Fnu:  FN0972
  Dra:  DRB0009
  Cac:  CAC1375
  Mtu:  Rv2848c
  MtC:  MT2914
  Lin:  lin1154
  Bha:  BH1898
  Syn:  sll1501
  Nos:  alr3934
  Sty:  STM2035
  Pae:  PA1273
  Rso:  RSp0615
  Atu:  AGc5069
  Sme:  SMc04282
  Bme:  BMEI0705
  Mlo:  mlr1387
_______

[J] COG1798 Diphthamide biosynthesis methyltransferase
  Afu:  AF0381
  Hbs:  VNG1118G
  Mac:  MA1370
  Mth:  MTH1874
  Mja:  MJ1274
  Mka:  MK0747
  Tac:  Ta0883
  Tvo:  TVN0982
  Pho:  PH0725
  Pab:  PAB1501
  Pya:  PAE1139
  Sso:  SSO0953
  Ape:  APE0931
  Sce:  YLR172c
  Spo:  SPCC576.14
  Ecu:  ECU11g1430
_______

[S] COG1799 Uncharacterized protein conserved in bacteria
  Fnu:  FN0562 FN1010
  Cac:  CAC2120
  Cgl:  Cgl2102
  Mtu:  Rv2147c
  MtC:  MT2206
  Mle:  ML0920
  Lla:  L119731
  Spy:  SPy1518
  Spn:  SP1664
  Sau:  SA1032
  Lin:  lin2136
  Bsu:  BS_ylmF
  Bha:  BH2549
  Syn:  slr2073
  Nos:  alr0487
_______

[R] COG1800 Predicted transglutaminase-like proteases
  Afu:  AF0384
  Mja:  MJ1282 MJECL39 MJECS12m
  Pho:  PH0672 PH1321
_______

[S] COG1801 Uncharacterized conserved protein
  Afu:  AF0792
  Mac:  MA2258
  Tac:  Ta0973 Ta0990
  Tvo:  TVN0475 TVN1119
  Pho:  PH0152
  Pab:  PAB2251
  Pya:  PAE2078 PAE3079
  Sso:  SSO0453 SSO0494
  Ape:  APE2180
  Aae:  aq_1408 aq_926
  Tma:  TM1631
  Dra:  DR0541 DR0758
  Sau:  SA0782
  Lin:  lin2505
  Bsu:  BS_yunF
  Bha:  BH3455
  Nos:  alr0901
  Eco:  yecE
  EcZ:  ZyecE
  Ecs:  ECs2578
  Ype:  YPO2052
  Sty:  STM1903
  Vch:  VC1165
  Pae:  PA2157 PA3683
  Pmu:  PM0108
  Rso:  RSc0765
  Atu:  AGc2792 AGpA14
  Sme:  SMc01236
  Mlo:  mlr0752 mlr4414
  Ccr:  CC3109
_______

[K] COG1802 Transcriptional regulators
  Tac:  Ta1394
  Sso:  SSO1255
  Tma:  TM0439
  Fnu:  FN0878 FN1987
  Dra:  DR0815
  Cac:  CAC0379
  Cgl:  Cgl0642 Cgl0979 Cgl2264
  Mtu:  Rv0043c Rv0165c
  MtC:  MT0049
  Lla:  L0240
  Spy:  SPy1179
  Sau:  SA2295
  Lin:  lin0416 lin0652 lin0654 lin0766 lin2248
  Bsu:  BS_gntR BS_ydhC
  Bha:  BH1062
  Eco:  ydfH ygaE yjjM yncC
  EcZ:  Z2269 ZydfH ZygaE ZyjjM
  Ecs:  ECs2054 ECs2149 ECs3525 ECs5317
  Ype:  YPO3651
  Sty:  STM1510 STM1588 STM2275 STM2794 STM3357 STM3358
  Vch:  VC1335
  Pae:  PA0121 PA0797 PA1269 PA1520 PA1526 PA4185 PA4906
        PA5525
  Nme:  NMB1563
  NmA:  NMA1751
  Rso:  RSc2114 RSc2117 RSc3276 RSp0185 RSp0328 RSp0331 RSp0436
  Atu:  AGc1447 AGc2564 AGc2595 AGc2620 AGc4549 AGl1259 AGl1472
        AGl1783 AGl1787 AGl1876 AGl2035 AGl2599 AGl3049 AGl3568
        AGl357 AGl414 AGpA183 AGpA588 AGpA592 AGpA716
  Sme:  SMa0062 SMa0065 SMa0160 SMa0222 SMa0267 SMa0789 SMa0955
        SMa1505 SMa1654 SMa1759 SMb20105 SMb20129 SMb20258 SMb20323
        SMb20773 SMc01974 SMc02036 SMc02425 SMc02777 SMc03258
  Bme:  BMEI0106 BMEI0254 BMEI0320 BMEII0204 BMEII0226 BMEII0281 BMEII0475
        BMEII0807 BMEII0878 BMEII1007
  Mlo:  mll2325 mll3328 mll4189 mll6291 mll6782 mll6786 mll6988
        mll7060 mll7255 mll7354 mll9027 mlr0625 mlr1038 mlr2114
        mlr3982 mlr4749 mlr4761 mlr5721 mlr6299 mlr7090 mlr7144
        mlr7171 mlr7177 mlr7428 mlr8380 mlr8446 mlr9047
  Ccr:  CC0884 CC1776 CC2392 CC2661 CC3142
_______

[G] COG1803 Methylglyoxal synthase
  Tma:  TM1185
  Cac:  CAC1604
  Lin:  lin2020
  Bsu:  BS_ypjF
  Bha:  BH1681
  Syn:  sll0036_1
  Eco:  mgsA
  EcZ:  ZmgsA
  Ecs:  ECs1047
  Ype:  YPO1441
  Sty:  STM1076
  Vch:  VCA0711
  Hin:  HI1234
  Pmu:  PM0394
  Rso:  RSc2185
  Atu:  AGc311
  Sme:  SMc02834
  Bme:  BMEII0252
  Bbu:  BB0364
_______

[C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
  Afu:  AF0020 AF0973 AF0974 AF0990 AF1315
  Tvo:  TVN0908 TVN1161
  Pya:  PAE2467
  Sso:  SSO1343 SSO3144
  Dra:  DR1717 DRA0025
  Mtu:  Rv0855 Rv1143 Rv1866 Rv3272
  MtC:  MT0878 MT1176 MT1915 MT3372
  Eco:  caiB yfdE yfdW
  EcZ:  Z3639 ZcaiB ZyfdEm
  Ecs:  ECs0041 ECs3250 ECs3251 ECs3254
  Sty:  STM0072
  Pae:  PA0446 PA0882 PA1188 PA3592 PA3733
  Rso:  RSc0796 RSc1197 RSc1375 RSc3367 RSp1421
  Atu:  AGc3858
  Sme:  SMb21089 SMb21182
  Bme:  BMEI0898 BMEII0224 BMEII1019 BMEII1076
  Mlo:  mll1018 mll7158 mlr1614 mlr2316 mlr6096
  Ccr:  CC1841 CC2325 CC3562
_______

[C] COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB
  Syn:  slr1442
  Nos:  alr1997
  Ype:  YPO3239
  Vch:  VC2294
  Pae:  PA2998
  Hin:  HI0166
  Pmu:  PM1329
  Nme:  NMB0568
  NmA:  NMA0751
  Mlo:  mll6619_1
  Ctr:  CT278
  Cpn:  CPn0427
_______

[S] COG1806 Uncharacterized protein conserved in bacteria
  Dra:  DR1728
  Sau:  SA1392
  Lin:  lin1494 lin1980
  Bsu:  BS_yqfL
  Bha:  BH1373
  Eco:  ydiA
  EcZ:  ZydiA
  Ecs:  ECs2410
  Ype:  YPO2410
  Sty:  STM1348
  Vch:  VCA0986
  Pae:  PA1769
  Xfa:  XF1260
  Nme:  NMB0619
  NmA:  NMA0827
  Rso:  RSc1420
  Atu:  AGc5142
  Sme:  SMc02793
  Bme:  BMEI2060
  Mlo:  mlr4488
  Ccr:  CC0001
  Rpr:  RP001
  Rco:  RC0001
_______

[M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
  Afu:  AF0616
  Pho:  PH0090
  Pab:  PAB0056
  Aae:  aq_1220 aq_1236 aq_765 aqq_03
  Fnu:  FN1262
  Cac:  CAC0193 CAC2251
  Bsu:  BS_ykcB BS_yycA
  Syn:  sll1946 sll2003 slr1820 slr2027
  Nos:  all2870 alr2076 alr4346 alr4347 alr4691
  Eco:  yfbI
  EcZ:  Z3515
  Ecs:  ECs3145
  Ype:  YPO2418
  Sty:  STM2301
  Pae:  PA3556 PA4818
  Xfa:  XF0929 XF1814
  Nme:  NMB1954
  NmA:  NMA0497
  Rso:  RSc0071 RSc1181 RSc1324 RSp1193
  Atu:  AGc4035
  Sme:  SMb20807 SMc02383
  Bme:  BMEII1099
  Mlo:  mll1762 mlr0011
  Ccr:  CC0209 CC0468
_______

[S] COG1808 Predicted membrane protein
  Afu:  AF0785
  Hbs:  VNG2591C
  Mac:  MA1944
  Mja:  MJ0678 MJ1221
  Ape:  APE1478
  Spn:  SP1264
  Syn:  sll1151
  Nos:  alr4621 alr5317 asr3019
_______

[S] COG1809 Uncharacterized conserved protein
  Mth:  MTH1674
  Mja:  MJ0255
  Mka:  MK0394
  Cgl:  Cgl2487
  Bsu:  BS_yitD
_______

[S] COG1810 Uncharacterized protein conserved in archaea
  Afu:  AF1307 AF1687 AF2108
  Mac:  MA1824 MA4432
  Mth:  MTH1356 MTH601_1
  Mja:  MJ0575 MJ0757 MJ0838
  Mka:  MK0140 MK0534
_______

[R] COG1811 Uncharacterized membrane protein, possible Na+ channel or pump
  Afu:  AF1248
  Tma:  TM0226
  Fnu:  FN0013 FN0014
  Dra:  DR1630
  Cac:  CAC1482
  Lin:  lin0786
  Bsu:  BS_ydfK
  Bha:  BH4055
  Eco:  yqgA
  EcZ:  ZyqgA
  Ecs:  ECs3842
  Sty:  STM3115
_______

[E] COG1812 Archaeal S-adenosylmethionine synthetase
  Afu:  AF0050
  Hbs:  VNG1297C
  Mac:  MA0216 MA0962
  Mth:  MTH1376
  Mja:  MJ1208
  Mka:  MK1508
  Tac:  Ta0059
  Tvo:  TVN0015
  Pho:  PH1824
  Pab:  PAB2094
  Pya:  PAE0677
  Sso:  SSO0199
  Ape:  APE1596
  Aae:  aq_1226
  Spy:  SPy0538
_______

[K] COG1813 Predicted transcription factor, homolog of eukaryotic MBF1
  Afu:  AF1977
  Hbs:  VNG1029C VNG1483C
  Mac:  MA4267
  Mth:  MTH729
  Mja:  MJ0586
  Mka:  MK0449
  Tac:  Ta0948
  Tvo:  TVN1093
  Pho:  PH0783
  Pab:  PAB0842
  Pya:  PAE0783
  Sso:  SSO0270
  Ape:  APE2011
  Sce:  YOR298c-a
  Spo:  SPBC83.17
  Ecu:  ECU01g0955
_______

[S] COG1814 Uncharacterized membrane protein
  Afu:  AF0630 AF1294
  Mth:  MTH561
  Mja:  MJ0645
  Mka:  MK1383
  Tac:  Ta0067 Ta1184
  Tvo:  TVN0023 TVN0388
  Pho:  PH0325
  Pab:  PAB1273
  Pya:  PAE0867 PAE1846
  Sso:  SSO0649 SSO2568 SSO3250
  Ape:  APE0630 APE1814
  Sce:  YLR220w
  Spo:  SPBC1683.10c
  Tma:  TM0497
  Dra:  DR1601
  Cgl:  Cgl2230 Cgl2891
  Lla:  L104065 L104745
  Pae:  PA3851
  Mlo:  mlr6622
  Ccr:  CC0717
  Ctr:  CT728
_______

[N] COG1815 Flagellar basal body protein
  Aae:  aq_1184
  Tma:  TM1364
  Cac:  CAC2165
  Lin:  lin0718
  Bsu:  BS_flgB
  Bha:  BH2461
  Eco:  flgB
  EcZ:  ZflgB
  Ecs:  ECs1451
  Ype:  YPO0722 YPO1799
  Sty:  STM1174
  Buc:  BU337
  Vch:  VC2200
  Pae:  PA1077
  Rso:  RSp0342
  Hpy:  HP1559
  jHp:  jhp1467
  Cje:  Cj0528c
  Atu:  AGc976
  Sme:  SMc03027
  Bme:  BMEII1089
  Mlo:  mlr2911
  Ccr:  CC0953
  Tpa:  TP0396
  Bbu:  BB0294
_______

[F] COG1816 Adenosine deaminase
  Sce:  YBR284w YJL070c YML035c YNL141w
  Spo:  SPBC106.04 SPBC1198.02 SPBC1683.02
  Cac:  CAC3005
  Mtu:  Rv3313c
  Mle:  ML0700
  Lla:  L87453
  Nos:  all4418
  Eco:  add
  EcZ:  Zadd
  Ecs:  ECs2331
  Sty:  STM1463
  Vch:  VC2751
  Pae:  PA0148
  Rso:  RSc2098
  Atu:  AGc218
  Sme:  SMc04120
  Mlo:  mll3163
  Ccr:  CC3180
  Tpa:  TP0045
_______

[S] COG1817 Uncharacterized protein conserved in archaea
  Mac:  MA1064 MA4455
  Mth:  MTH781
  Mja:  MJ0665
  Pho:  PH1619
  Pab:  PAB1589 PAB2000
  Pya:  PAE2970
_______

[R] COG1818 Predicted RNA-binding protein, contains THUMP domain
  Afu:  AF2226
  Mth:  MTH909
  Mja:  MJ0421 MJ1257_1
  Mka:  MK0344_1 MK0402 MK0935_2 MK1462
  Pho:  PH0080 PH0084
  Pab:  PAB0046 PAB0051
  Pya:  PAE2935 PAE3175
  Sso:  SSO0773
  Ape:  APE1156
  Sce:  YGL232w
_______

[GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
  Mac:  MA0452 MA0453
  Mth:  MTH884_2
  Mja:  MJ1255
  Mka:  MK0977
  Sce:  YLR189c_2
  Dra:  DRA0329
  Cac:  CAC1997 CAC2007 CAC2716 CAP0045
  Mtu:  Rv1524 Rv1526c Rv2739c Rv2958c Rv2962c
  MtC:  MT1575 MT1577 MT2808.1 MT3034 MT3038
  Mle:  ML0125 ML0128 ML0985 ML2348
  Bsu:  BS_ydhE BS_yjiC BS_yojK
  Syn:  slr1125
  EcZ:  Z1190 Z1629m
  Ecs:  ECs1370
  Ype:  YPO1985
  Sty:  STM2773
  Vch:  VC2487
  Pae:  PA3478
  Mlo:  mll4188 mlr4194
_______

[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase
  Sso:  SSO2673
  Tma:  TM0814
  Fnu:  FN1133
  Dra:  DRA0066
  Cac:  CAC0188
  Cgl:  Cgl2593
  Mtu:  Rv3332
  MtC:  MT3435
  Lla:  L173068
  Spy:  SPy1694
  Spn:  SP2056
  Sau:  SA0656
  Lin:  lin0955 lin2213
  Bsu:  BS_nagA
  Bha:  BH0421
  Nos:  all0988
  Eco:  agaA nagA
  EcZ:  Z4489 ZnagA
  Ecs:  ECs0707 ECs4015
  Ype:  YPO0838 YPO2626
  Sty:  STM0683
  Vch:  VC0994 VC1783
  Pae:  PA3758
  Hin:  HI0140
  Pmu:  PM0874
  Xfa:  XF1465
  Atu:  AGc4726
  Sme:  SMc02878
  Bme:  BMEII0385
  Mlo:  mll4766
  Ccr:  CC0443 CC0534
  Bbu:  BB0151
  Mpu:  MYPU_3680 MYPU_3690
_______

[R] COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily)
  Afu:  AF1061
  Mac:  MA1475
  Mth:  MTH835
  Mja:  MJ0815
  Mka:  MK0114
_______

[S] COG1822 Predicted archaeal membrane protein
  Mth:  MTH1461 MTH655
  Mja:  MJ0419 MJ0420
  Pho:  PH0088 PH0089
  Pab:  PAB0054 PAB0055
_______

[R] COG1823 Predicted Na+/dicarboxylate symporter
  Sau:  SA0368
  Bsu:  BS_yhcL
  Eco:  ydjN
  EcZ:  Z2758
  Ecs:  ECs2435
  Ype:  YPO1716
  Sty:  STM1320 STM1368
  Vch:  VC1235
  Hin:  HI1154
  Pmu:  PM0335
  Cje:  Cj0025c
  Bbu:  BB0729
_______

[P] COG1824 Permease, similar to cation transporters
  Afu:  AF1505
  Hbs:  VNG2456Cm VNG2458C
  Mac:  MA1436 MA1437
  Mth:  MTH1401
  Mka:  MK0882 MK0883
  Pho:  PH0703
  Pab:  PAB0883
  Ape:  APE0156
_______

[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)
  Aae:  aq_348
  Tma:  TM1627
  Dra:  DR0427
  Cgl:  Cgl0915
  Mtu:  Rv1015c
  MtC:  MT1043
  Mle:  ML0245
  Sau:  SA0459
  Lin:  lin0243
  Bsu:  BS_ctc
  Bha:  BH0067
  Syn:  sll1824
  Nos:  alr4785
  Eco:  rplY
  EcZ:  ZrplY
  Ecs:  ECs3077
  Ype:  YPO1264
  Sty:  STM2224
  Buc:  BU138
  Vch:  VC1640
  Pae:  PA4671
  Hin:  HI1630
  Pmu:  PM0639
  Xfa:  XF2643
  Nme:  NMB0876
  NmA:  NMA1094
  Rso:  RSc0394
  Hpy:  HP1496
  jHp:  jhp1389
  Cje:  Cj0311
  Atu:  AGc4048
  Sme:  SMc02692
  Bme:  BMEI0481
  Mlo:  mlr2692
  Ccr:  CC0485
  Rpr:  RP606
  Rco:  RC0932
  Ctr:  CT799
  Cpn:  CPn0949
  Tpa:  TP0372
  Bbu:  BB0786
_______

[U] COG1826 Sec-independent protein secretion pathway components
  Afu:  AF0784 AF2056
  Hbs:  VNG0801C
  Mac:  MA3485 MA3486
  Mka:  MK1201
  Tac:  Ta1223a
  Tvo:  TVN0371
  Pya:  PAE1546
  Sso:  SSO0482 SSO0483 SSO11972
  Ape:  APE2141a APE2154a
  Aae:  aq_064b aq_064c
  Dra:  DR0292 DR0805
  Cgl:  Cgl1098 Cgl1455 Cgl2993
  Mtu:  Rv1224 Rv2094c
  MtC:  MT1262 MT2155
  Mle:  ML1079 ML1331
  Sau:  SA0335
  Lin:  lin0381
  Bsu:  BS_yczB BS_ydiI BS_ynzA
  Bha:  BH0552 BH3905
  Syn:  slr1046 ssl2823
  Nos:  asl0845 asr3878
  Eco:  tatA tatB tatE
  EcZ:  ZtatA ZtatB ZybeC
  Ecs:  ECs0665 ECs4766 ECs4767
  Ype:  YPO2597 YPO3777 YPO3778
  Sty:  STM0632 STM3973 STM3974
  Vch:  VC0086 VC0087 VCA0533
  Pae:  PA5068 PA5069
  Hin:  HI0187a HI0187b
  Pmu:  PM1689 PM1690
  Xfa:  XF0563 XF0564
  Nme:  NMB0600 NMB0601
  NmA:  NMA0804 NMA0805
  Rso:  RSc2941 RSc2942
  Hpy:  HP0320 HP1060
  jHp:  jhp0303 jhp0365
  Cje:  Cj0579c Cj1176c
  Atu:  AGc3133 AGc3135
  Sme:  SMc02066 SMc02067
  Bme:  BMEI1084
  Mlo:  msl1085
  Ccr:  CC2002 CC2003
  Rpr:  RP749
  Rco:  RC1160
_______

[R] COG1827 Predicted small molecule binding protein (contains 3H domain)
  Mth:  MTH1258_2 MTH1835_2
  Mka:  MK0033_2 MK0606_2 MK1412_2 MK1549_2
  Tma:  TM1602
  Fnu:  FN0011
  Cac:  CAC0009
  Spy:  SPy1427
  Spn:  SP1234
  Lin:  lin2129
  Bsu:  BS_yrxA
  Bha:  BH1216
_______

[F] COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
  Afu:  AF1941
  Hbs:  VNG1944C
  Mac:  MA1964
  Mth:  MTH169
  Mja:  MJ1593
  Mka:  MK0791
  Tac:  Ta1044m
  Tvo:  TVN0551
  Pho:  PH1955a
  Pab:  PAB3433
  Pya:  PAE0224
  Sso:  SSO6264
  Aae:  aq_932a
  Tma:  TM1244
  Dra:  DR0224
  Cgl:  Cgl2536
  Mtu:  Rv0787a
  MtC:  MT0812
  Mle:  ML2219A
  Lla:  L177031
  Sau:  SA0919
  Lin:  lin1883
  Bsu:  BS_purS
  Bha:  BH0627
  Syn:  slr0519
  Nos:  asr2474
  Cje:  Cj0513
  Sme:  SMc00494
  Bme:  BMEI1123
  Mlo:  msl0067
  Ccr:  CC2492
_______

[R] COG1829 Predicted archaeal kinase (sugar kinase superfamily)
  Afu:  AF1646
  Hbs:  VNG0251C
  Mac:  MA1279
  Mth:  MTH577
  Mja:  MJ0969
  Mka:  MK0733
  Pho:  PH1827
  Pab:  PAB2407
  Pya:  PAE3407
  Sso:  SSO2397
  Ape:  APE1939
_______

[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
  Afu:  AF0108 AF0230
  Hbs:  VNG0309C VNG0683C
  Mac:  MA0439 MA2666 MA3889 MA4591
  Mth:  MTH579
  Mja:  MJ0400 MJ1585
  Mka:  MK1409
  Pho:  PH0082
  Pab:  PAB0049
  Sso:  SSO3226
  Ape:  APE0011
  Aae:  aq_1554
  Nos:  all3735
  Eco:  fbaB yneB
  EcZ:  Z3260 ZyneB
  Ecs:  ECs2124 ECs2900
  Ype:  YPO0408
  Sty:  STM2141 STM4078
  Pmu:  PM1278
  Atu:  AGl1940
  Sme:  SMb20498
  Mlo:  mlr7221
  Ctr:  CT215
  Cpn:  CPn0281
_______

[R] COG1831 Predicted metal-dependent hydrolase (urease superfamily)
  Afu:  AF0899
  Hbs:  VNG1610C
  Mac:  MA4266
  Mth:  MTH560
  Mja:  MJ1127
  Mka:  MK0074
  Tac:  Ta1354
  Tvo:  TVN0301
  Pho:  PH1234
  Pab:  PAB1699
  Pya:  PAE2050
  Ape:  APE1014
_______

[R] COG1832 Predicted CoA-binding protein
  Hbs:  VNG0608C
  Tac:  Ta1005
  Tvo:  TVN0743
  Pho:  PH1109
  Pab:  PAB1624
  Pya:  PAE2668
  Sso:  SSO1111
  Ape:  APE1660
  Aae:  aq_1869
  Tma:  TM1435
  Dra:  DR0556
  Lla:  L158834
  Spy:  SPy0186
  Spn:  SP0033
  Lin:  lin1324
  Bsu:  BS_yneT
  Bha:  BH2141
  Eco:  yccU
  EcZ:  Z1317
  Ecs:  ECs1049
  Ype:  YPO1443
  Sty:  STM1078
  Rso:  RSc3313
  Cje:  Cj0829c
  Atu:  AGc2308
  Sme:  SMc01808
  Mlo:  mlr8464
_______

[S] COG1833 Uncharacterized conserved protein
  Afu:  AF0383
  Hbs:  VNG0694G
  Mac:  MA4145
  Mth:  MTH641
  Mja:  MJ0613_2
  Mka:  MK0596
  Tvo:  TVN1029
  Pho:  PH0629
  Pab:  PAB1435
  Pya:  PAE3499
  Sso:  SSO3200
  Tma:  TM0664
_______

[E] COG1834 N-Dimethylarginine dimethylaminohydrolase
  Mac:  MA0792 MA3652
  Ape:  APE2601
  Cac:  CAC0376
  Mtu:  Rv2323c
  MtC:  MT2385
  Bsu:  BS_ykgA
  Bha:  BH1779
  Syn:  sll1336_1
  Nos:  alr4995_1
  Pae:  PA1195
  Sme:  SMb21304
  Mlo:  mll7670 mlr5205
_______

[I] COG1835 Predicted acyltransferases
  Mac:  MA2182 MA3638
  Fnu:  FN2029
  Dra:  DR2012
  Cgl:  Cgl0357 Cgl0684 Cgl1359 Cgl2797
  Mtu:  Rv0111 Rv0228 Rv0517 Rv1254 Rv1565c
  MtC:  MT0120 MT0238 MT0538 MT1293 MT1616
  Mle:  ML1101 ML1213 ML2580 ML2670
  Lla:  L158566
  Spy:  SPy0041
  Spn:  SP2057
  Sau:  SA0834 SA2354
  Lin:  lin1329
  Bsu:  BS_yrhL
  Nos:  alr3061
  EcZ:  Z3614
  Ecs:  ECs3232
  Sty:  STM2232
  Pae:  PA3157 PA4338 PA5238 PA5458
  Hin:  HI0392
  Xfa:  XF0142 XF0778
  Nme:  NMB1836_1
  NmA:  NMA0619_1 NMA2202_1
  Rso:  RSc1540 RSp0635
  Atu:  AGc3040 AGc4279 AGl2557 AGl3365 AGl3583 AGl540gl
  Sme:  SMa1016 SMb20810 SMb20943 SMb21188
  Bme:  BMEI1919
  Mlo:  mll0074 mll0134 mll0962 mll1125 mll3140 mll5285 mll5669
        mll7336 mll7337 mll8353 mll9238 mlr0695 mlr0739 mlr1941
        mlr2124 mlr6144 mlr6758 mlr7143 mlr8031 mlr8032 mlr8454
  Ccr:  CC0348 CC1328 CC1521 CC2815 CC2957
  Rco:  RC1275
_______

[S] COG1836 Predicted membrane protein
  Afu:  AF0706
  Hbs:  VNG1782C
  Mac:  MA1653
  Mth:  MTH1592
  Mja:  MJ0933
  Tac:  Ta0520
  Tvo:  TVN0997
  Pho:  PH0259
  Pab:  PAB0160
  Pya:  PAE1016
  Bha:  BH1418
  Syn:  sll0875
  Nos:  alr1612
_______

[R] COG1837 Predicted RNA-binding protein (contains KH domain)
  Aae:  aq_124a
  Tma:  TM1567
  Fnu:  FN0285
  Dra:  DR2009
  Cac:  CAC1756
  Mtu:  Rv2908c
  MtC:  MT2976
  Mle:  ML1617
  Lla:  L9737
  Spy:  SPy0841
  Spn:  SP0776
  Lin:  lin1910
  Bsu:  BS_ylqC
  Bha:  BH2482
  Syn:  slr0287
  Nos:  alr1954
  Hpy:  HP1150
  jHp:  jhp1077
  Cje:  Cj0711
  Ctr:  CT659 CT763
  Cpn:  CPn0720 CPn0906
  Tpa:  TP0906
  Bbu:  BB0696
_______

[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
  Afu:  AF1098
  Mac:  MA2498
  Mth:  MTH1115 MTH1910
  Mja:  MJ0617
  Mka:  MK0086
  Pho:  PH1684
  Pab:  PAB2031
  Pya:  PAE2131
  Aae:  aq_1679
  Tma:  TM0541 TM0684
  Cac:  CAC3090
  Bha:  BH0894_2
  Eco:  fumA_2 fumB_2 ttdB
  EcZ:  Z0887_2 ZfumA_2 ZfumB_2 ZttdB
  Ecs:  ECs0757_2 ECs2318_2 ECs3945 ECs5104_2
  Ype:  YPO3335_2
  Sty:  STM0761 STM1468_2 STM3354 STM4300_2
  Vch:  VC1304_2
  Pae:  PA4333_2
  Xfa:  XF1855_2
  Nme:  NMB1613_2
  NmA:  NMA1812_2
  Rso:  RSc1955_2
  Bme:  BMEI1016_2
  Mlo:  mlr6099_2
_______

[S] COG1839 Uncharacterized conserved protein
  Afu:  AF2422
  Mth:  MTH699
  Tac:  Ta1353m
  Tvo:  TVN0497
  Pho:  PH1918
  Pab:  PAB1234
  Pya:  PAE2307
  Sso:  SSO0651
  Ape:  APE2289
  Tma:  TM0196
  Mtu:  Rv3735
  MtC:  MT3840
  Rso:  RSc0419
_______

[P] COG1840 ABC-type Fe3+ transport system, periplasmic component
  Hbs:  VNG0924G
  Mac:  MA1229 MA1271
  Pya:  PAE0061 PAE3657
  Ape:  APE1728
  Fnu:  FN0128 FN0308 FN0375
  Cgl:  Cgl0423
  Spy:  SPy1063
  Spn:  SP0243 SP1826
  Sau:  SA0217
  Bha:  BH0513
  Syn:  sll0237 slr0513 slr1295
  Nos:  alr1382
  EcZ:  ZafuA
  Ecs:  ECs0415
  Ype:  YPO2958 YPO3050
  Sty:  STM0429 STM2398
  Vch:  VC0608 VCA0603 VCA0685 VCA0706
  Pae:  PA2377 PA3250 PA4687 PA5217
  Hin:  HI0097 HI0131
  Pmu:  PM0051 PM0203 PM0953 PM0954 PM0955 PM1457 PM1458
  Xfa:  XF0324
  Nme:  NMB0634
  NmA:  NMA0844
  Rso:  RSc1791 RSc2934 RSc2937
  Cje:  Cj0175c Cj0727
  Atu:  AGc346 AGc3652 AGc3890 AGc4480 AGc715 AGl196 AGl198
        AGl591
  Sme:  SMa0522 SMa0523 SMb20157 SMb20158 SMb20365 SMb20723 SMb21540
        SMc00784 SMc01605 SMc04317
  Bme:  BMEII0565 BMEII0584 BMEII1120
  Mlo:  mll3069 mll3626 mlr3495
_______

[J] COG1841 Ribosomal protein L30/L7E
  Afu:  AF1904
  Hbs:  VNG1716G
  Mac:  MA1093
  Mth:  MTH24
  Mja:  MJ0476
  Mka:  MK0028
  Tac:  Ta1250m
  Tvo:  TVN0346
  Pho:  PH1756
  Pab:  PAB2137
  Pya:  PAE1183
  Sso:  SSO0697
  Ape:  APE0345
  Sce:  YGL076c YMR286w YNL002c YPL198w
  Spo:  SPAC3H5.07 SPAC664.06 SPBC18H10.12c SPCC1919.08c
  Ecu:  ECU03g0950
  Aae:  aq_1644
  Tma:  TM1482
  Fnu:  FN1626
  Dra:  DR2114
  Cac:  CAC3115
  Cgl:  Cgl0528
  Mtu:  Rv0722
  MtC:  MT0747
  Mle:  ML1841
  Lla:  L0424
  Spy:  SPy0071
  Spn:  SP0228
  Sau:  SA2030
  Lin:  lin2763
  Bsu:  BS_rpmD
  Bha:  BH0152
  Eco:  rpmD
  EcZ:  ZrpmD
  Ecs:  ECs4167
  Ype:  YPO0227
  Sty:  STM3422
  Buc:  BU506
  Vch:  VC2578
  Pae:  PA4245
  Hin:  HI0796
  Pmu:  PM1397
  Xfa:  XF1170
  Nme:  NMB0160
  NmA:  NMA0111
  Rso:  RSc3001
  Sme:  SMc01291
  Bme:  BMEI0775
  Mlo:  msr0316
  Ccr:  CC1266
  Rpr:  RP641
  Rco:  RC0988
  Tpa:  TP0206a
  Bbu:  BB0496
_______

[KT] COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
  Mac:  MA1460
  Aae:  aq_1345
  Dra:  DR1473
  Cac:  CAC0313
  Cgl:  Cgl1916 Cgl2884
  Mtu:  Rv2744c
  MtC:  MT1676 MT2815
  Lin:  lin0954
  Bsu:  BS_ydjF BS_yvqH
  Bha:  BH1196
  Syn:  sll0617 slr1188
  Nos:  all2342 all2343
  Eco:  pspA yjfJ
  EcZ:  ZpspA ZyjfJ
  Ecs:  ECs1881 ECs5158
  Ype:  YPO2351
  Sty:  STM1690 STM4371
  Vch:  VC1678
  Pae:  PA3731
  Mlo:  mlr2456
  Ccr:  CC2362
_______

[N] COG1843 Flagellar hook capping protein
  Aae:  aq_1858
  Tma:  TM0673
  Cac:  CAC2156
  Lin:  lin0704
  Bsu:  BS_ylxG
  Bha:  BH2451
  Eco:  flgD
  EcZ:  ZflgD
  Ecs:  ECs1453
  Ype:  YPO0724 YPO1801
  Sty:  STM1176
  Buc:  BU339
  Vch:  VC2198
  Pae:  PA1079
  Rso:  RSp0344
  Hpy:  HP0907
  jHp:  jhp0843
  Cje:  Cj0042
  Atu:  AGc1021
  Sme:  SMc03052
  Bme:  BMEII0164
  Mlo:  mlr2942
  Ccr:  CC0901
  Tpa:  TP0728
  Bbu:  BB0284
_______

[S] COG1844 Uncharacterized protein conserved in archaea
  Mac:  MA4099
  Mth:  MTH730
  Mja:  MJ0949
  Mka:  MK0454
  Pho:  PH1612
  Pab:  PAB1994
_______

[C] COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3
  Hbs:  VNG0662G
  Pya:  PAE1337_2
  Sso:  SSO2973_2
  Ape:  APE0793_2
  Sce:  Q0275
  Aae:  aq_2188
  Dra:  DR2620_2
  Cgl:  Cgl2144
  Mtu:  Rv2193
  MtC:  MT2249
  Mle:  ML0882
  Sau:  SA0911
  Lin:  lin0015
  Bsu:  BS_ctaE BS_qoxC
  Bha:  BH2066 BH2613
  Syn:  slr1138 slr2083
  Nos:  alr0952 alr2516 alr2734
  Eco:  cyoC
  EcZ:  ZcyoC
  Ecs:  ECs0484
  Ype:  YPO3166
  Sty:  STM0441
  Buc:  BU470
  Pae:  PA0108 PA0521 PA1319
  Xfa:  XF1388
  Rso:  RSc0367 RSc1860 RSc2915 RSp1566 RSp1567
  Atu:  AGc1407 AGc225 AGl949
  Sme:  SMa1279 SMb21489 SMc00013 SMc01984 SMc01985
  Bme:  BMEI1462 BMEI1899 BMEII1001
  Mlo:  mlr1042 mlr1043 mlr6848 mlr7496
  Ccr:  CC1771 CC3402
  Rpr:  RP191
  Rco:  RC0240
_______

[K] COG1846 Transcriptional regulators
  Afu:  AF1596
  Hbs:  VNG0462C
  Mac:  MA0079_2 MA0176 MA0180 MA0743 MA1122 MA1863 MA2051
        MA2055 MA2206 MA2211 MA2771 MA3189
  Mth:  MTH313 MTH931
  Mja:  MJ0432
  Mka:  MK0984
  Tac:  Ta0411 Ta0731 Ta1166
  Tvo:  TVN1162 TVN1246
  Pho:  PH1061
  Pab:  PAB0619
  Pya:  PAE1227 PAE1366 PAE2679 PAE2684
  Sso:  SSO1082 SSO1352 SSO2114 SSO2573 SSO3188
  Ape:  APE0288
  Tma:  TM0710 TM0816
  Fnu:  FN0681 FN2010
  Dra:  DR0259 DR1159 DRA0248
  Cac:  CAC0162 CAC0197 CAC0559 CAC0627 CAC0763 CAC0876 CAC1465
        CAC1569 CAC2486 CAC3283 CAC3406 CAC3413 CAC3418 CAC3485
        CAC3579 CAC3669 CAP0024 CAP0052
  Cgl:  Cgl0083 Cgl0176 Cgl0285 Cgl0610 Cgl1040 Cgl1145 Cgl2461
        Cgl2654 Cgl2869 Cgl2932
  Mtu:  Rv0042c Rv0737 Rv0880 Rv1049 Rv1404 Rv2011c Rv2327
        Rv2887
  MtC:  MT0048 MT0762 MT1079 MT1448 MT2066 MT2389 MT2955
  Mle:  ML0550 ML2140 ML2696
  Lla:  L0248 L102062_1 L106489 L110960 L114370 L115025 L131803
        L140141 L168265 L180805 L182006 L583407
  Spy:  SPy0092 SPy0228 SPy1755 SPy1960
  Spn:  SP0416 SP1774 SP1863 SP1920 SP2062 SP2172
  Sau:  SA0108 SA0322 SA0573 SA0623 SA0641 SA0904 SA1583
        SA2060 SA2062 SA2089 SA2091 SA2147 SA2174 SA2286
        SA2287 SA2308 SA2421 SAP009
  Lin:  lin0291 lin0513 lin0615 lin0621 lin0790 lin0811 lin0831
        lin0988 lin1188 lin1659 lin1964 lin2303 lin2874 lin2960
  Bsu:  BS_hpr BS_ybfA_1 BS_ycgE BS_ydcH BS_ydgG BS_ydgJ BS_yetL
        BS_yfiV BS_yhbI BS_yhjH BS_ykmA BS_ykoM BS_ykvE BS_ypoP
        BS_ysmB BS_yusO BS_yvmB BS_yvnA BS_ywaE BS_ywhA BS_ywoH
        BS_yxaD BS_yybA
  Bha:  BH0645 BH1185 BH2061 BH2164 BH2176 BH3072 BH3077
        BH3815 BH4044
  Nos:  all0372 alr4692 alr7168
  Eco:  emrR marR slyA
  EcZ:  Z4048 ZemrR ZmarR ZslyA
  Ecs:  ECs2137 ECs2351 ECs3546 ECs3594
  Ype:  YPO1760 YPO2374 YPO3266
  Sty:  STM1100 STM1444 STM1520 STM1547 STM2813 STM2920
  Vch:  VC0649 VC1278 VCA0955 VCA1005
  Pae:  PA0253 PA0424 PA0942 PA1285 PA1603 PA1653 PA2825
        PA2849 PA3067 PA3341 PA3458 PA4135 PA5157
  Xfa:  XF0216 XF1354 XF1490
  Nme:  NMB1585 NMB1843
  NmA:  NMA0613 NMA1774
  Rso:  RSc0149 RSc0590 RSc1112 RSc1295 RSc1592 RSc1821 RSc1849
        RSc1851 RSc2325 RSc2430 RSc2725 RSc3139 RSp0034 RSp0224
        RSp0260 RSp0386 RSp0664 RSp1106 RSp1644
  Atu:  AGc1531 AGc1544 AGc1559 AGc167 AGc2008 AGc2152 AGc2625
        AGc361 AGc4007 AGc4275 AGc4601 AGc466 AGc4831 AGl1945_1
        AGl3233 AGl3507 AGl46 AGl729 AGpA213 AGpA294 AGpA395
        AGpA606 AGpA607 AGpA85
  Sme:  SMa2020 SMb21317 SMc00098 SMc00146 SMc00380 SMc00384 SMc00562
        SMc01592 SMc01768 SMc01908 SMc01945 SMc02826 SMc02851 SMc02976
        SMc03209 SMc03824 SMc04052
  Bme:  BMEI0253 BMEI0446 BMEI0494 BMEI1194 BMEI1949 BMEII0133 BMEII0310
        BMEII0311 BMEII0408 BMEII0520 BMEII0530 BMEII0785 BMEII0796
  Mlo:  mll0381 mll1407 mll1839 mll4280 mll4834 mll4876 mll5152
        mll5432 mll6841 mll7902 mll8302 mlr0538 mlr1478 mlr1898
        mlr2046 mlr2509 mlr2665 mlr2690 mlr3448 mlr4398 mlr4795
        mlr5157 mlr5447 mlr5607 mlr6949 mlr7736 mlr8209_1 mlr8230
        mlr8294 mlr8394
  Ccr:  CC0115 CC0396 CC0880 CC0915 CC1213 CC2188 CC2206
        CC2391 CC2930 CC3149_1 CC3387 CC3677
_______

[R] COG1847 Predicted RNA-binding protein
  Tma:  TM1460
  Fnu:  FN0005
  Dra:  DR0246
  Cac:  CAC3735
  Mtu:  Rv3920c
  MtC:  MT4039
  Mle:  ML2709
  Lla:  L132712
  Spy:  SPy0248
  Spn:  SP2040
  Lin:  lin2985
  Bsu:  BS_jag
  Bha:  BH4063
  Syn:  slr1472
  Nos:  alr3416
  Tpa:  TP0948
  Bbu:  BB0443
_______

[R] COG1848 Predicted nucleic acid-binding protein, contains PIN domain
  Afu:  AF0065 AF0293 AF0313 AF0315 AF0317 AF0318 AF0320
        AF1077 AF1086m AF1089 AF1091 AF1385 AF1711 AF2012
        AF2190 AF2213 AF2360
  Mja:  MJ0974 MJECL30
  Pho:  PH0910
  Pab:  PAB0520 PAB0550 PAB0788 PAB0859 PAB1216 PAB1672 PAB2271
        PAB7218
  Pya:  PAE0101 PAE2829
  Sso:  SSO1483 SSO1651 SSO1657 SSO1746 SSO1968 SSO1969 SSO2579
        SSO3078 SSO3128 SSO8813
  Ape:  APE0273 APE0279 APE1209a APE2616 APE2618a
  Dra:  DR0660
  Mtu:  Rv0240 Rv0277c Rv0617 Rv0661c Rv0749 Rv1242 Rv1838c
        Rv1962c Rv2103c Rv2494 Rv2530c Rv2602 Rv2863 Rv2872
        Rv3180c Rv3320c Rv3384c Rv3408 Rv3697c
  MtC:  MT0254 MT0289 MT0646 MT0690 MT0773 MT1280 MT1886
        MT2012 MT2163 MT2569 MT2605 MT2677 MT2932 MT2939
        MT3271 MT3421 MT3492 MT3516 MT3799
  Sme:  SMb20411 SMb20412 SMc00393
_______

[S] COG1849 Uncharacterized protein conserved in archaea
  Afu:  AF1782
  Hbs:  VNG1260C
  Mac:  MA1371
  Mth:  MTH1690
  Mja:  MJ0273
  Mka:  MK1632
  Tac:  Ta0304
  Tvo:  TVN1296
  Pho:  PHS038
  Pab:  PAB1803
  Pya:  PAE0683_1
  Sso:  SSO0954_1
  Ape:  APE2281_1
_______

[G] COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit
  Afu:  AF1587 AF1638
  Mac:  MA4555
  Mja:  MJ1235
  Pho:  PH0939
  Pab:  PAB1580
  Bsu:  BS_ykrW
  Syn:  slr0009
  Nos:  alr1524
  Sme:  SMb20198 SMb20393
  Mlo:  mll7006
_______

[S] COG1851 Uncharacterized conserved protein
  Mja:  MJ1463
  Pho:  PH1314
  Pab:  PAB1806
  Aae:  aq_756
_______

[S] COG1852 Uncharacterized conserved protein
  Afu:  AF0204
  Mac:  MA0689 MA0690
  Mth:  MTH559
  Mja:  MJ1141
  Pab:  PAB0178
  Fnu:  FN1837
_______

[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
  Afu:  AF0830 AF1786
  Mac:  MA0328 MA1341 MA2295 MA3322 MA3965
  Mth:  MTH152 MTH574
  Tac:  Ta1444
  Pho:  PH0856
  Pab:  PAB1557
  Pya:  PAE1295 PAE2058
  Sso:  SSO2055
  Ape:  APE2580
  Spo:  SPAC1071.11
  Aae:  aq_928
  Tma:  TM0157 TM0564
  Fnu:  FN0320 FN1468
  Dra:  DR2459 DR2585
  Cac:  CAC2437
  Cgl:  Cgl0982 Cgl1250
  Mtu:  Rv0245 Rv1939 Rv3007c Rv3567c
  MtC:  MT0259 MT1989 MT3087 MT3672
  Mle:  ML2561
  Lla:  L81206
  Spn:  SP0565
  Sau:  SA2448 SA2452
  Lin:  lin0755 lin1042
  Bsu:  BS_ydfE BS_ywrF
  Bha:  BH0392 BH2278 BH3984
  Syn:  sll0217_2 sll0219_2 sll0550_2 sll1521_2 slr0001
  Nos:  all0177_2 all0178_2 all3891_2 all3895_2 all4444_2 all4446_2
  Eco:  ycdH yddH
  EcZ:  Z1506 Z2251
  Ecs:  ECs1253 ECs2065
  Ype:  YPO1770
  Sty:  STM1098
  Pae:  PA1644 PA4092
  Pmu:  PM1522
  Nme:  NMB1842
  NmA:  NMA0614
  Rso:  RSc0763 RSc1820 RSc1836
  Atu:  AGc3198 AGc4534 AGc4599 AGl1244 AGl2798 AGl3083 AGl355
        AGl583 AGpA322 AGpA605
  Sme:  SMa0322 SMa0753 SMa0758 SMa0793 SMa1653 SMc00514 SMc01013
        SMc02426
  Bme:  BMEI0709 BMEI0919
  Mlo:  mll0910 mll3444 mlr0087
  Ccr:  CC2275
  Rpr:  RP149
  Rco:  RC0191
_______

[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis
  Dra:  DR2387
  Cac:  CAC2942
  Lla:  L65029
  Spy:  SPy1642
  Spn:  SP0340
  Sau:  SA1936
  Lin:  lin1327
  Bsu:  BS_ytjB
  Bha:  BH3353
  Eco:  luxS
  EcZ:  ZygaG
  Ecs:  ECs3549
  Ype:  YPO3300
  Sty:  STM2817
  Vch:  VC0557
  Hin:  HI0491
  Pmu:  PM1054
  Nme:  NMB1981
  NmA:  NMA0463
  Hpy:  HP0105
  jHp:  jhp0097
  Cje:  Cj1198
  Bbu:  BB0377
_______

[R] COG1855 ATPase (PilT family)
  Afu:  AF1951
  Hbs:  VNG2615C
  Mac:  MA0909
  Mth:  MTH246
  Mja:  MJ1533
  Mka:  MK1536
  Tac:  Ta0316
  Tvo:  TVN0440
  Pho:  PH1123
  Pab:  PAB1633
  Pya:  PAE3216
  Sso:  SSO0572
  Ape:  APE0462
_______

[S] COG1856 Uncharacterized homolog of biotin synthetase
  Pho:  PH0938
  Pab:  PAB1579
  Sso:  SSO1114
  Aae:  aq_403
  Tma:  TM1877
_______

[L] COG1857 Uncharacterized protein predicted to be involved in DNA repair
  Afu:  AF0068 AF1871
  Mac:  MA3667
  Mth:  MTH1088
  Mja:  MJ0381
  Pho:  PH0170 PH0920 PH1250
  Pab:  PAB1686
  Pya:  PAE0210
  Sso:  SSO1399 SSO1442 SSO1997 SSO2005
  Ape:  APE1235
  Aae:  aq_374
  Fnu:  FN1181
_______

[P] COG1858 Cytochrome c peroxidase
  Mac:  MA2908 MA2925
  Aae:  aq_136
  Dra:  DRA0301
  Eco:  yhjA
  EcZ:  ZyhjA
  Ecs:  ECs4398
  Ype:  YPO3342
  Sty:  STM3820
  Vch:  VC0089
  Pae:  PA3032 PA4587
  Pmu:  PM0939
  Rso:  RSc2493 RSp0718 RSp1173
  Hpy:  HP1461
  jHp:  jhp1354
  Cje:  Cj0020c Cj0358
  Atu:  AGc5068
  Mlo:  mll1163 mlr1826 mlr5805
_______

[J] COG1859 RNA:NAD 2'-phosphotransferase
  Afu:  AF0406 AF1553
  Mac:  MA4638
  Mka:  MK1434
  Tac:  Ta0118m
  Tvo:  TVN0196
  Pho:  PH0160
  Pab:  PAB2247
  Pya:  PAE3647
  Ape:  APE0204
  Sce:  YOL102c
  Spo:  SPAC2C4.12c
  Fnu:  FN1102
  Dra:  DR2427_2
  Eco:  kptA
  EcZ:  Z5930
  Ecs:  ECs5289
  Pae:  PA0054
  Atu:  AGl2490
_______

[S] COG1860 Uncharacterized protein conserved in archaea
  Afu:  AF2154
  Hbs:  VNG1401C
  Mac:  MA3685
  Mth:  MTH609
  Mja:  MJ1627
  Tac:  Ta1159
  Tvo:  TVN1226
  Pho:  PH1477
  Pya:  PAE0681
_______

[M] COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog
  Mja:  MJ1063
  Fnu:  FN1686
  Cac:  CAC2190
  Bsu:  BS_spsF
  Ccr:  CC2853 CC3575
  Tpa:  TP0288
_______

[U] COG1862 Preprotein translocase subunit YajC
  Aae:  aq_1254
  Tma:  TM0859
  Fnu:  FN1335
  Cac:  CAC2281
  Cgl:  Cgl1619
  Mtu:  Rv2588c
  MtC:  MT2665
  Mle:  ML0486
  Lla:  L184708
  Spy:  SPy1968
  Spn:  SP0326 SP2029
  Sau:  SA1464
  Lin:  lin1564
  Bsu:  BS_yrbF
  Bha:  BH1229
  Eco:  yajC
  EcZ:  ZyajC
  Ecs:  ECs0458
  Ype:  YPO3190
  Sty:  STM0406
  Buc:  BU134
  Vch:  VC0742
  Pae:  PA3822
  Hin:  HI0241
  Pmu:  PM0228
  Xfa:  XF0224
  Nme:  NMB0606
  NmA:  NMA0811
  Rso:  RSc2714
  Hpy:  HP1551
  jHp:  jhp1448
  Cje:  Cj1094c
  Atu:  AGc2879
  Sme:  SMc02058
  Bme:  BMEI1077
  Mlo:  mll1072
  Ccr:  CC1992
  Rpr:  RP585
  Rco:  RC0893
  Ctr:  CT741
  Cpn:  CPn0884
  Bbu:  BB0651
_______

[P] COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit
  Hbs:  VNG0571C
  Mac:  MA4568
  Mth:  MTH1251
  Mja:  MJ0953
  Pho:  PH0946 PH1427 PH1456
  Pab:  PAB0485 PAB0802 PAB1401 PAB1884
  Tma:  TM1205
  Dra:  DR0748a DR0884
  Cgl:  Cgl0267 Cgl2675
  Sau:  SA0582 SA0809
  Lin:  lin2481
  Bsu:  BS_mnhE
  Bha:  BH1315
  Vch:  VCA0154
  Pae:  PA1057
  Atu:  AGc1664 AGc898
  Sme:  SMc00055 SMc03182
  Bme:  BMEII0767
  Rpr:  RP156
  Rco:  RC0199
_______

[F] COG1864 DNA/RNA endonuclease G, NUC1
  Mac:  MA3330_2
  Sce:  YJL208c
  Spo:  SPAC17C9.08
  Fnu:  FN1280_2
  Nos:  all7362 alr7261 alr8011
  Sty:  STM1330
  Pae:  PA1327
  Rso:  RSc0744
  Hpy:  HP1382
  jHp:  jhp1295
  Cje:  Cj0594c
  Ccr:  CC0544
  Bbu:  BB0411
_______

[S] COG1865 Uncharacterized conserved protein
  Afu:  AF1400
  Hbs:  VNG1583C
  Mac:  MA1623
  Mja:  MJ1613
  Mka:  MK1672_1
  Tac:  Ta0894
  Tvo:  TVN0793
  Pho:  PH0814
  Pab:  PAB1708
  Pya:  PAE0371_1
  Sso:  SSO1594
  Ape:  APE2032_1
  Bsu:  BS_yvrA_2
  Bha:  BH1587_2
_______

[C] COG1866 Phosphoenolpyruvate carboxykinase (ATP)
  Ape:  APE0033
  Sce:  YKR097w
  Fnu:  FN1120
  Dra:  DR0977
  Sau:  SA1609
  Bsu:  BS_pckA
  Bha:  BH3302
  Eco:  pckA
  EcZ:  ZpckA
  Ecs:  ECs4245
  Ype:  YPO0138
  Sty:  STM3500
  Vch:  VC2738
  Pae:  PA5192
  Hin:  HI0809
  Pmu:  PM1542
  Cje:  Cj0932c
  Atu:  AGc56
  Sme:  SMc02562
  Bme:  BMEI2037
  Mlo:  mlr5096
_______

[J] COG1867 N2,N2-dimethylguanosine tRNA methyltransferase
  Afu:  AF0815
  Hbs:  VNG2088G
  Mac:  MA1455
  Mth:  MTH1190
  Mja:  MJ0946
  Mka:  MK0154 MK0189
  Tac:  Ta0997
  Tvo:  TVN0736
  Pho:  PH1829
  Pab:  PAB2092
  Pya:  PAE1628
  Sso:  SSO0943
  Ape:  APE0782
  Sce:  YDR120c
  Spo:  SPBC25D12.05
  Ecu:  ECU08g1450
  Aae:  aq_841
_______

[N] COG1868 Flagellar motor switch protein
  Aae:  aq_1238
  Tma:  TM0679
  Cac:  CAC2216
  Lin:  lin0707
  Bsu:  BS_fliM
  Bha:  BH2446
  Eco:  fliM
  EcZ:  ZfliM
  Ecs:  ECs2684
  Ype:  YPO1823
  Sty:  STM1976
  Buc:  BU080
  Vch:  VC2126
  Pae:  PA1443
  Rso:  RSp0378
  Hpy:  HP1031
  jHp:  jhp0393
  Cje:  Cj0060c
  Atu:  AGc987
  Sme:  SMc03021
  Bme:  BMEII1110
  Mlo:  mll2904
  Tpa:  TP0721
  Bbu:  BB0278
_______

[G] COG1869 ABC-type ribose transport system, auxiliary component
  Tma:  TM0959
  Cgl:  Cgl1226
  Lla:  L85737
  Sau:  SA0259
  Bsu:  BS_rbsD
  Bha:  BH3729
  Eco:  rbsD
  EcZ:  ZrbsD
  Ecs:  ECs4690
  Ype:  YPO0007 YPO3620
  Sty:  STM3881
  Vch:  VCA0127
  Hin:  HI0501
  Pmu:  PM0156
  Mpu:  MYPU_6000
_______

[NT] COG1871 Chemotaxis protein; stimulates methylation of MCP proteins
  Afu:  AF1038
  Hbs:  VNG0967Gm
  Mac:  MA0011 MA3064
  Pho:  PH0490
  Pab:  PAB1335
  Tma:  TM0903
  Cac:  CAC2223
  Bsu:  BS_cheD
  Bha:  BH2433
  Vch:  VCA1090
  Pae:  PA0174
  Rso:  RSp1404
  Atu:  AGc918
  Sme:  SMc03012
  Ccr:  CC0438
  Bbu:  BB0606
_______

[S] COG1872 Uncharacterized conserved protein
  Afu:  AF2072
  Mac:  MA4097
  Mth:  MTH637
  Mja:  MJ0618
  Mka:  MK0273
  Pab:  PAB7122
  Ape:  APE0182
  MtC:  MT2038
  Nos:  asl3196
  Eco:  yggU
  EcZ:  ZyggU
  Ecs:  ECs3829
  Ype:  YPO0944
  Sty:  STM3102
  Vch:  VC0458
  Pmu:  PM1313
  Atu:  AGc4821
  Mlo:  msl4154
  Ccr:  CC3622
  Rpr:  RP839
  Rco:  RC1301
  Ctr:  CT388
  Cpn:  CPn0497
_______

[S] COG1873 Uncharacterized conserved protein
  Afu:  AF0359 AF1532
  Hbs:  VNG0982C VNG1995C
  Mac:  MA0818 MA3528
  Mth:  MTH1151 MTH1859 MTH815 MTH974
  Mja:  MJ0916 MJ1118
  Mka:  MK0096 MK1514 MK1669
  Tac:  Ta0943
  Tvo:  TVN1087
  Pho:  PH0209a
  Pab:  PAB3055
  Cac:  CAC1697 CAC1809
  Bsu:  BS_ylmC BS_ymxH
  Bha:  BH2404 BH2552
_______

[G] COG1874 Beta-galactosidase
  Pho:  PH0511
  Pab:  PAB1349
  Tma:  TM0310 TM1195
  Cac:  CAC2514
  Spn:  SP0060
  Bsu:  BS_lacA BS_yesZ
  Bha:  BH2022 BH3701
  Ype:  YPO0852
  Xfa:  XF0840
  Sme:  SMb20966
  Ccr:  CC0788 CC2801
_______

[T] COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH
  Tma:  TM0495
  Cgl:  Cgl0065
  Mtu:  Rv1095
  MtC:  MT1127
  Mle:  ML1951
  Bsu:  BS_ylaK
  Bha:  BH2629
  Vch:  VC2507
  Pae:  PA3919
  Xfa:  XF0959 XF0960
  Rso:  RSc1316
  Ctr:  CT015
  Cpn:  CPn0106
_______

[M] COG1876 D-alanyl-D-alanine carboxypeptidase
  Cac:  CAC3297
  Lla:  L175147
  Spy:  SPy1765
  Spn:  SP0629
  Lin:  lin1969
  Bsu:  BS_yodJ
  Bha:  BH1810
  Syn:  sll0034 sll0777
  Nos:  all3702
  Ype:  YPO3054
  Vch:  VC2153
  Hin:  HI0100 HI0101
  Pmu:  PM1021
  Xfa:  XF0881
  Tpa:  TP0221
  Bbu:  BB0582
_______

[G] COG1877 Trehalose-6-phosphatase
  Mth:  MTH1760
  Tac:  Ta1209m
  Tvo:  TVN1255
  Pya:  PAE1272_2
  Sce:  YDR074w_2 YML100w_3 YMR261c_3
  Spo:  SPAC19G12.15c_2 SPAC22F8.05_2 SPAC3G6.09c_2 SPACUNK4.16c_2
  Ecu:  ECU01g0870_2
  Cgl:  Cgl2575
  Mtu:  Rv2006_2 Rv3372_2
  MtC:  MT2062_2 MT3482_2
  Mle:  ML0414_2
  Eco:  otsB
  EcZ:  ZotsB
  Ecs:  ECs2605
  Sty:  STM1929
  Rso:  RSp1104
  Mlo:  mll0690
_______

[R] COG1878 Predicted metal-dependent hydrolase
  Afu:  AF1200
  Hbs:  VNG0740C
  Mac:  MA3709 MA3747
  Mth:  MTH1796 MTH796
  Mja:  MJ0783
  Tac:  Ta0723
  Tvo:  TVN0858
  Pab:  PAB0997
  Pya:  PAE0036
  Sso:  SSO3071
  Tma:  TM0008
  Cgl:  Cgl0870
  Mtu:  Rv1716
  MtC:  MT1755
  Sau:  SA0343
  Bha:  BH0378
  Syn:  slr2121
  Nos:  alr3769
  Pae:  PA2081
  Hin:  HI1016
  Pmu:  PM0097 PM1362 PM1641
  Rso:  RSc0760 RSc1835
  Atu:  AGl227
  Sme:  SMc01459
  Mlo:  mlr5444
_______

[G] COG1879 ABC-type sugar transport system, periplasmic component
  Mac:  MA3266_2
  Tma:  TM0114 TM0958
  Fnu:  FN1165
  Cac:  CAC1351 CAC1453
  Cgl:  Cgl0030 Cgl1225
  Mle:  ML0398
  Lla:  L82310
  Bsu:  BS_rbsB
  Bha:  BH2323 BH3448 BH3732 BH3840 BH3901
  Eco:  alsB araF mglB rbsB torT yneA yphF
        ytfQ
  EcZ:  Z0415 Z2189 Z5689 ZaraF ZmglB ZrbsB ZtorT
        ZyphF ZytfQ
  Ecs:  ECs0374 ECs1149 ECs2123 ECs2609 ECs3042 ECs3414 ECs4693
        ECs5071 ECs5205
  Ype:  YPO0409 YPO0860 YPO0959 YPO1293 YPO1507 YPO1517 YPO1813
        YPO2255 YPO2285 YPO2501 YPO2581 YPO3318 YPO3328 YPO3633
        YPO3908 YPO3962
  Sty:  STM2190 STM3825 STM3884 STM4077
  Vch:  VC1325 VCA0130 VCA0710 VCA0737
  Pae:  PA1946
  Hin:  HI0504 HI0822
  Pmu:  PM0153 PM1038 PM1249 PM1277 PM1325 PM1377
  Rso:  RSc1017 RSc1241 RSc2758 RSp1026
  Atu:  AGc3486 AGc5109 AGc94 AGl1084 AGl1638 AGl1930 AGl2023
        AGl2598 AGl2685 AGl271 AGl2900 AGl3185 AGl3223 AGl3489
        AGl632 AGl634 AGl636 AGl777 AGl86 AGl993 AGpA634
        AGpT139
  Sme:  SMa0067 SMa0203 SMa0218 SMa0273 SMa1427 SMa2000 SMa2049
        SMa2055 SMb20018 SMb20072 SMb20316 SMb20349 SMb20484 SMb20504
        SMb20508 SMb20620 SMb20671 SMb20712 SMb20720 SMb20817 SMb20856
        SMb20931 SMb21016 SMb21345 SMb21377 SMb21421 SMb21587 SMc00163
        SMc02021 SMc02022 SMc02033 SMc02171 SMc02324 SMc02338 SMc02774
        SMc03165 SMc03813
  Bme:  BMEI0393 BMEI0662 BMEI0663 BMEI1385 BMEI1390 BMEII0435
  Mlo:  mll1004 mll1012 mll1508 mll1682 mll1692 mll1725 mll1918
        mll2148 mll3407 mll3596 mll4204 mll4996 mll4997 mll5706
        mll5768 mll5838 mll5934m mll7014 mll7019 mll7082 mll7360
        mll7366 mll7376 mll7623 mll7668 mll8567 mlr1890 mlr2439
        mlr3334 mlr4966 mlr5740 mlr7288 mlr7582 mlr7625 mlr8058
        mlr8217
  Ccr:  CC0859
  Tpa:  TP0545 TP0684
_______

[C] COG1880 CO dehydrogenase/acetyl-CoA synthase epsilon subunit
  Afu:  AF1101 AF2398
  Mac:  MA1015 MA3861
  Mth:  MTH1709
  Mja:  MJ0154
  Mka:  MK0718
_______

[R] COG1881 Phospholipid-binding protein
  Afu:  AF1698
  Hbs:  VNG2152C
  Mac:  MA1432
  Mth:  MTH273
  Tac:  Ta1084
  Tvo:  TVN0491
  Pho:  PH1269
  Pab:  PAB0765
  Sso:  SSO0767
  Sce:  YLR178c YLR179c
  Aae:  aq_1250
  Cac:  CAC3398
  Cgl:  Cgl1487
  Mtu:  Rv1910c Rv1911c Rv2140c
  MtC:  MT1961 MT1962 MT2198
  Mle:  ML1289
  Sau:  SA0840
  Bsu:  BS_yxkA
  Eco:  ybcL ybhB
  EcZ:  ZybhB
  Ecs:  ECs0851
  Sty:  STM0792 STM1081
  Vch:  VC1075
  Pmu:  PM1470
  Xfa:  XF2170
  Nme:  NMB1529
  NmA:  NMA1729
  Rso:  RSp0024
  Hpy:  HP0218
  jHp:  jhp0204
  Atu:  AGl1304
  Sme:  SMb20703
  Mlo:  mlr6790
  Rco:  RC1288
  Ctr:  CT736
  Cpn:  CPn0877
  Uur:  UU340_1
_______

[C] COG1882 Pyruvate-formate lyase
  Afu:  AF1449
  Mth:  MTH346
  Fnu:  FN0262
  Cac:  CAC0980
  Lla:  L57408
  Spy:  SPy1849 SPy2049
  Spn:  SP0251 SP0459
  Sau:  SA0218
  Lin:  lin1443 lin2031
  Eco:  pflB pflD tdcE ybiW
  EcZ:  Z1046m ZpflB ZpflD ZtdcE
  Ecs:  ECs0900 ECs0901 ECs0986 ECs3994 ECs4880
  Ype:  YPO1383
  Sty:  STM0843 STM0973 STM3241 STM4114
  Vch:  VC1866
  Hin:  HI0180
  Pmu:  PM0075
  Rso:  RSc1546_2
_______

[C] COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit
  Afu:  AF2084
  Pho:  PH1283
  Pab:  PAB1772
  Tma:  TM0880
  Fnu:  FN0201
  Spy:  SPy1177 SPy1184
  Sty:  STM0054 STM0768 STM3351
  Vch:  VC0551 VC0792
  Pmu:  PM1423
  Tpa:  TP0057
_______

[I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit
  Afu:  AF1288a AF2215
  Hbs:  VNG0481G VNG0653G
  Tac:  Ta0462
  Tvo:  TVN0772
  Pho:  PH1306
  Pab:  PAB1800
  Sso:  SSO2425
  Ape:  APE1687
  Dra:  DR1084_1 DR1189
  Cgl:  Cgl1492_1 Cgl1493_1
  Mtu:  Rv1492_1 Rv1493_1
  MtC:  MT1535 MT1539_1 MT1540_1
  Mle:  ML1799_1 ML1800_1
  Bha:  BH2955_1 BH2956_1 BH3796_3
  Eco:  sbm_1
  EcZ:  Zsbm_1
  Ecs:  ECs3787_1
  Rso:  RSc0237_3
  Atu:  AGl2498_1
  Sme:  SMb20757_1
  Bme:  BMEI0799_1
  Mlo:  mll7619_1 mll7621
  Ccr:  CC2373 CC2374_1 CC3081_1
_______

[S] COG1885 Uncharacterized protein conserved in archaea
  Afu:  AF0282
  Hbs:  VNG0879C VNG1264C
  Mac:  MA1372
  Mja:  MJ0068
  Mka:  MK0748
  Pho:  PH1312
  Pab:  PAB1804
_______

[NU] COG1886 Flagellar motor switch/type III secretory pathway protein
  Aae:  aq_1539
  Tma:  TM0680a
  Cac:  CAC2215_2
  Lin:  lin0701 lin0706 lin0708_2
  Bsu:  BS_fliY_2
  Bha:  BH2445_2
  Eco:  fliN
  EcZ:  Z4190 ZfliN ZsepQ
  Ecs:  ECs2685 ECs3726 ECs4565
  Ype:  YPCD1.43 YPO0269 YPO0710 YPO1822
  Sty:  STM1418 STM1977 STM2891
  Buc:  BU081
  Vch:  VC2125
  Pae:  PA1444 PA1694
  Rso:  RSp0377 RSp0861
  Hpy:  HP0584 HP1030_2
  jHp:  jhp0394_2 jhp0531
  Cje:  Cj0059c_2 Cj0351
  Atu:  AGc988
  Sme:  SMc03020
  Bme:  BMEII1112
  Mlo:  mll2902 mlr6344
  Ccr:  CC0908 CC2175
  Ctr:  CT672
  Cpn:  CPn0704
  Tpa:  TP0720_2
  Bbu:  BB0277
_______

[M] COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
  Mth:  MTH361 MTH365
  Pho:  PH0397
  Lla:  L141091_3 L143992 L146188 L151480 L152603
  Sau:  SA0243 SA0244 SA0247 SA0595 SA2157
  Lin:  lin1068_2 lin1074 lin1075
  Bsu:  BS_ggaB_2 BS_spsB BS_tagB BS_tagF_2
  Pae:  PA1091_1
  Xfa:  XF1993
_______

[S] COG1888 Uncharacterized protein conserved in archaea
  Afu:  AF1549
  Mth:  MTH889
  Mja:  MJ0319
  Mka:  MK1384
  Tac:  Ta1183
  Tvo:  TVN0389
  Pho:  PH1931
  Pab:  PAB1228
  Pya:  PAE0866
  Sso:  SSO6206
  Ape:  APES031
_______

[J] COG1889 Fibrillarin-like rRNA methylase
  Afu:  AF2087
  Hbs:  VNG1176G
  Mac:  MA0341
  Mth:  MTH1215
  Mja:  MJ0697
  Mka:  MK0560
  Tac:  Ta0949
  Tvo:  TVN1094
  Pho:  PH0052
  Pab:  PAB2306
  Pya:  PAE3228
  Sso:  SSO0940
  Ape:  APE2196
  Sce:  YDL014w
  Spo:  SPBC2D10.10c
  Ecu:  ECU10g0820
_______

[J] COG1890 Ribosomal protein S3AE
  Afu:  AF2320
  Hbs:  VNG0787G
  Mac:  MA3416
  Mth:  MTH1593
  Mja:  MJ0980
  Mka:  MK1461
  Tac:  Ta1167
  Tvo:  TVN1247
  Pho:  PH0060
  Pab:  PAB0035
  Pya:  PAE3472
  Sso:  SSO0746
  Ape:  APE1154
  Sce:  YLR441c YML063w
  Spo:  SPAC13G6.02c SPAC22H12.04c
  Ecu:  ECU05g0250
_______

[S] COG1891 Uncharacterized protein conserved in archaea
  Afu:  AF2196
  Mac:  MA4436
  Mth:  MTH141
  Mja:  MJ1099
  Mka:  MK1602
_______

[S] COG1892 Uncharacterized protein conserved in archaea
  Afu:  AF1486
  Hbs:  VNG2259C
  Mac:  MA2690
  Mth:  MTH943
  Mka:  MK0190
  Pho:  PH0016
  Pab:  PAB2342
  Pya:  PAE3416
  Sso:  SSO2256
_______

[H] COG1893 Ketopantoate reductase
  Afu:  AF1695
  Hbs:  VNG0730C
  Pho:  PH1390
  Pab:  PAB0512
  Pya:  PAE3409
  Ape:  APE0677
  Sce:  YDL144c YDR197w YHR063c
  Spo:  SPBPB2B2.09c
  Aae:  aq_1727
  Cac:  CAC1471 CAC1605 CAC2937 CAC3607
  Cgl:  Cgl1065
  Mtu:  Rv2573
  MtC:  MT2649
  Lla:  L157055
  Spy:  SPy0852
  Sau:  SA2232 SA2393
  Lin:  lin2152
  Bsu:  BS_ykpB BS_ylbQ
  Bha:  BH1763 BH2579
  Nos:  all1319
  Eco:  apbA
  EcZ:  ZapbA
  Ecs:  ECs0479
  Ype:  YPO3171
  Sty:  STM0434 STM2573
  Vch:  VC2307
  Pae:  PA1752 PA4397
  Rso:  RSc0174 RSc3361 RSp1244
  Mlo:  mll4803 mll4847 mll6982
  Ccr:  CC0261
_______

[C] COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
  Mth:  MTH1549_1
  Spo:  SPBC18E5.10
  Aae:  aq_573
  Tma:  TM0010_1 TM0228 TM1425_1
  Dra:  DR1500
  Mtu:  Rv3150
  MtC:  MT3238
  Syn:  sll1221
  Nos:  alr0752
  Eco:  nuoF
  EcZ:  ZnuoF
  Ecs:  ECs3168
  Ype:  YPO2551
  Sty:  STM2324
  Buc:  BU158
  Pae:  PA2641
  Xfa:  XF0310
  Nme:  NMB0246
  NmA:  NMA0014
  Rso:  RSc2057
  Atu:  AGc2350 AGl349
  Sme:  SMa1525 SMc01918 SMc02525
  Bme:  BMEI1153
  Mlo:  mll1365 mll5397
  Ccr:  CC1947
  Rpr:  RP115
  Rco:  RC0155
_______

[S] COG1895 Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
  Afu:  AF0298
  Mac:  MA2617
  Mja:  MJ0142 MJ0605
  Pho:  PH1297
  Tma:  TM1000
_______

[R] COG1896 Predicted hydrolases of HD superfamily
  Afu:  AF1432
  Hbs:  VNG7115
  Mka:  MK0037
  Pho:  PH0347
  Pab:  PAB1287
  Pya:  PAE1004
  Sso:  SSO2391
  Ape:  APE2359
  Sce:  YBR242w YGL101w
  Spo:  SPCC4G3.17
  Dra:  DR0704
  Sau:  SA0711
  Lin:  lin2634
  Eco:  yfbR yfdR
  EcZ:  Z3552
  Ecs:  ECs3175
  Ype:  YPO2559
  Sty:  STM2332
  Vch:  VC1978
  Pae:  PA1878
  Pmu:  PM0747
  Hpy:  HP0711_2
  jHp:  jhp0650_2
  Cje:  Cj0015c_2
  Atu:  AGc1942
  Sme:  SMc02559
  Bme:  BMEI1283
  Mlo:  mll7788
  Ccr:  CC1451
_______

[E] COG1897 Homoserine trans-succinylase
  Tma:  TM0881
  Cac:  CAC1825
  Lla:  L0101
  Spn:  SP1576
  Bsu:  BS_metB
  Bha:  BH2280
  Eco:  metA
  EcZ:  ZmetA
  Ecs:  ECs4931
  Ype:  YPO3727
  Sty:  STM4182
  Vch:  VC1611
  Cje:  Cj1726c
  Atu:  AGc4927
  Sme:  SMc03797
  Bme:  BMEII0781
_______

[M] COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
  Afu:  AF0323b
  Mac:  MA1909 MA3780
  Mth:  MTH1790 MTH572 MTH573
  Tvo:  TVN0901
  Pho:  PH0416
  Pab:  PAB0787
  Sso:  SSO0833 SSO1923
  Ape:  APE1178
  Fnu:  FN1699
  Dra:  DRA0043
  Cac:  CAC2331
  Cgl:  Cgl0332_1
  Mtu:  Rv3465
  MtC:  MT3571
  Mle:  ML1965
  Lla:  L198323
  Spy:  SPy0935
  Spn:  SP0359_2
  Sau:  SA0149_2
  Bsu:  BS_spsK_2
  Bha:  BH3366
  Syn:  slr0985 slr1933
  Nos:  alr2830 alr4489
  Eco:  rfbC
  Sty:  STM2094
  Pae:  PA5164
  Pmu:  PM1008_2
  Xfa:  XF0257
  Nme:  NMB0081
  NmA:  NMA0187 NMA0206
  Rso:  RSc0685
  Cje:  Cj1430c
  Atu:  AGl166 AGl529
  Sme:  SMb21325 SMb21428
  Bme:  BMEII0830
  Mlo:  mll5319 mlr7551
  Ccr:  CC3633
_______

[O] COG1899 Deoxyhypusine synthase
  Afu:  AF2195 AF2300
  Hbs:  VNG1432G
  Mac:  MA0968 MA3013
  Mth:  MTH127
  Mja:  MJ0814
  Mka:  MK0737
  Tac:  Ta0356
  Tvo:  TVN0418
  Pho:  PH1397
  Pab:  PAB0511
  Pya:  PAE3487
  Sso:  SSO0967
  Ape:  APE0698
  Sce:  YHR068w
  Spo:  SPBC1271.04c
  Ecu:  ECU09g0910
  Nos:  alr3804
  Ccr:  CC0359
_______

[S] COG1900 Uncharacterized conserved protein
  Afu:  AF1186_1
  Mac:  MA1821_1 MA3299_1
  Mth:  MTH1684_1 MTH855_1
  Mja:  MJ0100_1 MJ1681_1
  Mka:  MK0358_1 MK0907_1
  Syn:  slr0689
  Nos:  all1701
_______

[S] COG1901 Uncharacterized conserved protein
  Afu:  AF1056
  Hbs:  VNG1980C
  Mac:  MA1448
  Mja:  MJ1640
  Mka:  MK1018
  Pho:  PH1401
  Pab:  PAB1866
  Pya:  PAE2175
  Ape:  APE0797
  Vch:  VCA1059
_______

[C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family
  Afu:  AF0248 AF0455_1 AF1262_1
  Hbs:  VNG0933G
  Mac:  MA1003 MA1426
  Tac:  Ta0162m_1
  Tvo:  TVN0232_1
  Sso:  SSO1900_1 SSO2025_1
  Sce:  YHR179w YPL171c
  Spo:  SPAC5H10.04 SPAC5H10.10 SPBC23G7.10c
  Tma:  TM0428
  Fnu:  FN0714
  Dra:  DR2190 DR2333
  Cac:  CAC0196 CAC1044_1 CAC2798 CAC3229 CAC3371_1 CAC3408_1
  Cgl:  Cgl2982 Cgl2986
  Mtu:  Rv1175c_1 Rv3359
  MtC:  MT1212_1 MT3467
  Lla:  L133858
  Spy:  SPy1219
  Sau:  SA0311 SA0817
  Lin:  lin0492_1 lin2337_1 lin2614
  Bsu:  BS_yqiG BS_yqjM
  Bha:  BH1481
  Nos:  all0827 all1865
  Eco:  fadH_1 nemA
  EcZ:  Z0369 ZnemA ZygjL_1
  Ecs:  ECs0331 ECs2359 ECs3963_1
  Ype:  YPO0589_1 YPO2379
  Sty:  STM1436 STM3219_1
  Vch:  VC1993_1 VCA0993 VCA0998
  Pae:  PA0840 PA1334 PA2716 PA2932 PA3092_1 PA3723 PA4356
        PA4814_1 PA4986_1 PA5398_1
  Xfa:  XF1732
  Rso:  RSc0702 RSc1202 RSc1826_2 RSp0032_2 RSp0058_1 RSp0136 RSp0445
        RSp0682_1
  Atu:  AGc3979 AGc4611_1 AGpA653
  Sme:  SMa0257_1 SMa1604 SMa2291 SMb21570_1 SMc01227
  Bme:  BMEII0394 BMEII1018
  Mlo:  mll0149 mll2211 mll5434 mlr8292_1
  Ccr:  CC1802 CC2129 CC3083
  Mpu:  MYPU_7720
_______

[H] COG1903 Cobalamin biosynthesis protein CbiD
  Afu:  AF0723
  Mac:  MA0521
  Mth:  MTH808
  Mja:  MJ0022
  Mka:  MK0334
  Tac:  Ta0656
  Tvo:  TVN0920
  Pya:  PAE0346
  Sso:  SSO2305
  Fnu:  FN0967
  Cac:  CAC1377
  Lin:  lin1157
  Syn:  slr1538
  Nos:  all2847
  Sty:  STM2032
  Pae:  PA2908
  Rso:  RSp0622
  Atu:  AGc5073
  Bme:  BMEI0703
_______

[G] COG1904 Glucuronate isomerase
  Tma:  TM0064
  Cac:  CAC0692
  Cgl:  Cgl2433
  Lla:  L0019
  Bsu:  BS_yjmA
  Bha:  BH0705
  Eco:  uxaC
  EcZ:  ZuxaC
  Ecs:  ECs3974
  Ype:  YPO0579
  Sty:  STM3137
  Sme:  SMb21354
  Bme:  BMEII0476 BMEII0477
  Mlo:  mll4056
  Ccr:  CC1490
_______

[C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit
  Mth:  MTH1548
  Spo:  SPAC11E3.12
  Aae:  aq_574
  Tma:  TM0012 TM1420 TM1424 TM1426_3
  Dra:  DR1501
  Mtu:  Rv3149
  MtC:  MT3237
  Syn:  sll1220
  Nos:  alr0751
  Eco:  nuoE
  EcZ:  ZnuoE
  Ecs:  ECs3169
  Ype:  YPO2552
  Sty:  STM2325
  Buc:  BU157
  Pae:  PA2640
  Xfa:  XF0309
  Nme:  NMB0245
  NmA:  NMA0015
  Rso:  RSc2058
  Atu:  AGc2348_1 AGl350
  Sme:  SMa1526 SMc01917 SMc02524
  Bme:  BMEI1154
  Mlo:  mll1366_1 mll5398
  Ccr:  CC1950
  Rpr:  RP353
  Rco:  RC0481
_______

[S] COG1906 Uncharacterized conserved protein
  Afu:  AF0261
  Pho:  PH0014
  Pab:  PAB2344
  Pya:  PAE2454
  Tma:  TM0481
_______

[R] COG1907 Predicted archaeal sugar kinases
  Afu:  AF2089
  Mac:  MA0339 MA4006
  Mth:  MTH830
  Mja:  MJ1427
  Mka:  MK0558
  Pho:  PH0227 PH1228
  Pab:  PAB0141 PAB1694
  Sso:  SSO0370
  Ape:  APE1512 APE2425
_______

[C] COG1908 Coenzyme F420-reducing hydrogenase, delta subunit
  Afu:  AF0662_2 AF1238_2 AF1374
  Mac:  MA2868_2
  Mth:  MTH1136 MTH1138
  Mja:  MJ1190a
  Mka:  MK0268 MK0627
_______

[S] COG1909 Uncharacterized protein conserved in archaea
  Afu:  AF1115
  Mac:  MA3694
  Mth:  MTH266
  Mja:  MJ0395
  Mka:  MK1453
  Tac:  Ta1091
  Tvo:  TVN0484
  Pho:  PH1909
  Pab:  PAB1106
  Pya:  PAE3284
  Sso:  SSO0416
  Ape:  APE0256
_______

[P] COG1910 Periplasmic molybdate-binding protein/domain
  Afu:  AF0931_2
  Hbs:  VNG0086Gm_2
  Mac:  MA4350_2
  Mja:  MJ0886_2
  Tac:  Ta1022_2
  Tvo:  TVN0567_2
  Pya:  PAE0019_2 PAE3465_2
  Cac:  CAC0252 CAC2020_2
  Bsu:  BS_yvgK
  Rso:  RSc2092_2
_______

[J] COG1911 Ribosomal protein L30E
  Afu:  AF1890
  Mac:  MA1261
  Mth:  MTH1053
  Mja:  MJ1044
  Mka:  MK0683
  Pho:  PHS043
  Pab:  PAB7152
  Pya:  PAE0668
  Sso:  SSO0221
  Ape:  APE1851
  Sce:  YGL030w
  Spo:  SPAC1250.05 SPAC9G1.03c
  Ecu:  ECU05g1490
_______

[S] COG1912 Uncharacterized conserved protein
  Afu:  AF0461
  Hbs:  VNG0300C
  Mac:  MA4318
  Mja:  MJ1651
  Mka:  MK0807
  Pho:  PH0463
  Pab:  PAB1317
  Pya:  PAE3627
  Sso:  SSO0254
  Ape:  APE2338
  Aae:  aq_2196
  Tma:  TM0660
  Spn:  SP0481
  Sau:  SA2478
  Lin:  lin2732
  Nos:  all1327
  EcZ:  Z5331
  Ecs:  ECs4744
  Hpy:  HP0709
  jHp:  jhp0648
_______

[R] COG1913 Predicted Zn-dependent proteases
  Afu:  AF0330
  Hbs:  VNG2610C
  Mja:  MJ0281
  Mka:  MK0548
  Pho:  PH1784 PH1820
  Pab:  PAB2097 PAB2114
  Pya:  PAE1990
  Sso:  SSO0689
  Ape:  APE0147
  Aae:  aq_459
_______

[P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family
  Tac:  Ta0478m
  Tvo:  TVN0828
  Sso:  SSO2076 SSO2078 SSO2995
  Sce:  YHR050w YLR034c YOL122c
  Spo:  SPAC27F1.08
  Fnu:  FN0438
  Dra:  DR1709
  Cac:  CAC0628 CAC0685 CAC3329 CAP0063
  Cgl:  Cgl0978
  Mtu:  Rv0924c
  MtC:  MT0951
  Mle:  ML2098 ML2667
  Lla:  L91569
  Spn:  SP0159
  Sau:  SA0956 SA1432
  Lin:  lin1463
  Bsu:  BS_ycsG BS_ydaR
  Bha:  BH1820
  Nos:  all7601
  Eco:  mntA
  EcZ:  Z3658
  Ecs:  ECs3271
  Ype:  YPO2982
  Sty:  STM2408
  Pae:  PA0809 PA4334
  Hin:  HI1728
  Pmu:  PM0681
  Xfa:  XF1015
  Nme:  NMB0227 NMB1426
  NmA:  NMA0031 NMA1639
  Rso:  RSp0027 RSp0520
  Atu:  AGc3186 AGl1874
  Sme:  SMa1115
  Bme:  BMEI0569
  Mlo:  mlr2501
_______

[S] COG1915 Uncharacterized conserved protein
  Afu:  AF1278
  Mth:  MTH867
  Mja:  MJ1480
  Mka:  MK0866
  Syn:  sll1336_2
  Nos:  alr4995_2
_______

[S] COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein)
  Afu:  AF0331
  Hbs:  VNG0874G
  Mac:  MA0008
  Mth:  MTH1183
  Mja:  MJ1365
  Mka:  MK0139
  Pho:  PH1152
  Pab:  PAB0729
  Xfa:  XF2444
  Tpa:  TP0953
  Bbu:  BB0416
_______

[S] COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain
  Hbs:  VNG2170H
  Mac:  MA0402 MA0416
  Mth:  MTH1452
  Mja:  MJ0764
  Tac:  Ta0135
  Tvo:  TVN0214
  Pho:  PH0047 PH0537
  Pab:  PAB1369 PAB2310
  Pya:  PAE2796
  Sso:  SSO1570 SSO1812_2
  Aae:  aq_1978 aq_943
  Tma:  TM1010 TM1459
  Fnu:  FN1305
  Cac:  CAC3376
  Cgl:  Cgl0871 Cgl2004 Cgl2167 Cgl2893 Cgl2896
  Mtu:  Rv2619c
  Lla:  L178204
  Spy:  SPy1580 SPy1581
  Lin:  lin2877
  Bsu:  BS_yxaG
  Bha:  BH0370 BH0496
  Syn:  sll1163 slr2101
  Nos:  all0620
  Ype:  YPO1998
  Sty:  STM4071
  Pae:  PA0052 PA0270
  Rso:  RSc3304
  Hpy:  HP0902
  jHp:  jhp0839
  Cje:  Cj0761
  Atu:  AGl1124 AGl3329 AGl997
  Sme:  SMb20222 SMb20700 SMb20864 SMb21347 SMc01911
  Bme:  BMEII0800
  Mlo:  mll2045 mll2544 mll4053 mlr0979 mlr1120
_______

[P] COG1918 Fe2+ transport system protein A
  Afu:  AF2396
  Mac:  MA3478 MA3479
  Mth:  MTH1362 MTH214_2
  Mja:  MJ0567
  Mka:  MK1247
  Pab:  PAB3260
  Tma:  TM0050
  Dra:  DR1220
  Cac:  CAC0447 CAC1029 CAC1030
  Lla:  L192240
  Sau:  SA2338
  Lin:  lin2208
  Syn:  ssr2333
  Eco:  feoA
  EcZ:  ZfeoA
  Ecs:  ECs4250
  Ype:  YPO0133
  Sty:  STM3505
  Vch:  VC2078
  Pae:  PA4359
  Xfa:  XF0932
  Rso:  RSp0252
  jHp:  jhp0533
  Cje:  Cj1397
  Ccr:  CC0711
_______

[S] COG1920 Uncharacterized conserved protein
  Afu:  AF2061
  Hbs:  VNG1935C
  Mac:  MA1488
  Mth:  MTH613
  Mja:  MJ0887
  Mka:  MK0587
  Mtu:  Rv2983
  MtC:  MT3061
  Mle:  ML1680
_______

[E] COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]
  Mth:  MTH1914
  Mja:  MJ0158
  Mka:  MK0620
  Tac:  Ta0673
  Aae:  aq_1031
  Eco:  selA
  EcZ:  ZselA
  Ecs:  ECs4468
  Ype:  YPO4054
  Sty:  STM3683 STM3768 STM4446
  Pae:  PA4808
  Hin:  HI0708
  Pmu:  PM1768
  Hpy:  HP1513
  jHp:  jhp1406
  Cje:  Cj1378
  Atu:  AGl3109
  Sme:  SMa0011
  Mlo:  mlr3804
_______

[M] COG1922 Teichoic acid biosynthesis proteins
  Tma:  TM0818
  Dra:  DR1645
  Cac:  CAC2317
  Sau:  SA0592
  Lin:  lin2665
  Bsu:  BS_tagA
  Syn:  slr1118 slr1271
  Nos:  all4422 alr1705
  Eco:  wecG
  EcZ:  ZwecG
  Ecs:  ECs4728
  Ype:  YPO3855
  Sty:  STM3929
  Vch:  VC0927
  Xfa:  XF2360
  Atu:  AGc1038 AGc4311
  Bme:  BMEII1130
  Mlo:  mlr6502
  Ccr:  CC0095
  Tpa:  TP0275
_______

[R] COG1923 Uncharacterized host factor I protein
  Mja:  MJ1435
  Aae:  aq_108b
  Tma:  TM0526
  Cac:  CAC1834
  Sau:  SA1145
  Lin:  lin1333
  Bsu:  BS_ymaH
  Bha:  BH2365
  Eco:  hfq
  EcZ:  Zhfq
  Ecs:  ECs5148
  Ype:  YPO0373
  Sty:  STM4361
  Vch:  VC0347
  Pae:  PA4944
  Hin:  HI0411
  Pmu:  PM0906
  Xfa:  XF0089
  Nme:  NMB0748
  NmA:  NMA0961
  Rso:  RSc1220
  Sme:  SMc01048
  Bme:  BMEI0872
  Mlo:  mlr0402
  Ccr:  CC1745
_______

[I] COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
  Afu:  AF1959
  Mac:  MA3994
  Mth:  MTH1869
  Mja:  MJ0004 MJ0800
  Mka:  MK0260 MK0580
  Aae:  aq_278
  Tma:  TM0482_1
  Fnu:  FN0206 FN1139_1
  Cac:  CAC2401_1 CAC2428 CAC3623
  Lla:  L104115_1
  Lin:  lin0781_1
  Eco:  yjiL
  EcZ:  ZyjiL
  Ecs:  ECs5297
_______

[G] COG1925 Phosphotransferase system, HPr-related proteins
  Fnu:  FN1782 FN1794
  Dra:  DRB0075_2
  Cac:  CAC1820 CAC3088_1
  Cgl:  Cgl1892
  Lla:  L120335
  Spy:  SPy1373
  Spn:  SP1177
  Sau:  SA0934
  Lin:  lin1001
  Bsu:  BS_crh BS_ptsH
  Bha:  BH3074 BH3566
  Eco:  fruB_2 ptsH ptsO ycgC_2 ypdD_1
  EcZ:  Z3648_1 Z4879 ZfruB_2 ZptsH ZptsO ZycgC_2
  Ecs:  ECs1703_2 ECs3061_2 ECs3263_1 ECs3287 ECs4085 ECs4354
  Ype:  YPO0405_1 YPO1298_2 YPO2993 YPO3587
  Sty:  STM2206_2 STM2431 STM3256_2 STM3324 STM3779 STM4110_1
  Buc:  BU065
  Vch:  VC0966 VC2533 VCA0518_2
  Pae:  PA3562_2 PA3760_2 PA4466
  Hin:  HI0448_2 HI1713
  Pmu:  PM0898 PM1797_2
  Xfa:  XF1403
  Nme:  NMB2045
  NmA:  NMA0391
  Rso:  RSc0347 RSc2861_2 RSp1282_2
  Atu:  AGc49
  Sme:  SMc02754
  Bme:  BMEI2031
  Mlo:  msl5090 msl5292
  Ccr:  CC0241 CC0448_2 CC0537_2
  Ctr:  CT337
  Cpn:  CPn0037
  Tpa:  TP0589
  Bbu:  BB0448 BB0557
  Uur:  UU587
  Mpu:  MYPU_6030
  Mpn:  MPN053
  Mge:  MG041
_______

[R] COG1926 Predicted phosphoribosyltransferases
  Mac:  MA2685
  Tac:  Ta0227
  Tvo:  TVN1369
  Aae:  aq_059
  Mtu:  Rv0571c Rv2030c_1 Rv2143
  MtC:  MT0597 MT2089_1 MT2202
  Nos:  all1995
  Rso:  RSp0425
  Hpy:  HP1214
  jHp:  jhp1137
  Sme:  SMc01463
  Mlo:  mll6596
_______

[C] COG1927 Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase
  Afu:  AF0714
  Mac:  MA4430
  Mth:  MTH1464
  Mja:  MJ1035
  Mka:  MK0011
_______

[O] COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase
  Sce:  YAL023c YDL093w YDL095w YDR307w YGR199w YJR143c YOR321w
  Spo:  SPAC22A12.07c SPAPB1E7.09 SPBC16C6.09
  Ecu:  ECU02g1300
  Cgl:  Cgl0865
  Mtu:  Rv1002c
  MtC:  MT1031
  Mle:  ML0192
  Syn:  slr1050
  Nos:  alr3150
_______

[G] COG1929 Glycerate kinase
  Cac:  CAC2834
  Cgl:  Cgl1847 Cgl2028
  Mtu:  Rv2205c
  MtC:  MT2261
  Lla:  L79277
  Spy:  SPy1903
  Spn:  SP1126
  Sau:  SA0697 SA2220
  Lin:  lin2965
  Bsu:  BS_yxaA
  Bha:  BH0555
  Syn:  slr1840
  Eco:  ybbZ yhaD
  EcZ:  ZybbZ ZyhaD
  Ecs:  ECs0576 ECs4002
  Ype:  YPO3980
  Sty:  STM0525 STM2492 STM2959 STM3247
  Vch:  VCA0903
  Pae:  PA1052
  Hin:  HI0091
  Pmu:  PM1741
  Nme:  NMB1268
  NmA:  NMA1473
_______

[P] COG1930 ABC-type cobalt transport system, periplasmic component
  Afu:  AF0729
  Hbs:  VNG1634G
  Mac:  MA3553
  Mth:  MTH131
  Mja:  MJ1090
  Lin:  lin1168
  Nos:  alr3944
  Sty:  STM2022
_______

[S] COG1931 Uncharacterized protein conserved in archaea
  Afu:  AF1395_2
  Hbs:  VNG2454C
  Mac:  MA4659
  Mth:  MTH433
  Mja:  MJ1564
  Mka:  MK0399
  Pho:  PH1010
  Pab:  PAB0654
  Pya:  PAE1632
  Sso:  SSO1042
  Ape:  APE1751
_______

[HE] COG1932 Phosphoserine aminotransferase
  Mac:  MA2304
  Sce:  YOR184w
  Spo:  SPAC1F12.07
  Cgl:  Cgl0805
  Mtu:  Rv0884c
  MtC:  MT0907
  Mle:  ML2136
  Lla:  L0083
  Lin:  lin2957
  Bsu:  BS_serC
  Bha:  BH1188
  Nos:  all1683
  Eco:  serC
  EcZ:  ZserC
  Ecs:  ECs0990
  Ype:  YPO1389
  Sty:  STM0977
  Buc:  BU312
  Vch:  VC1159
  Pae:  PA3167
  Hin:  HI1167
  Pmu:  PM0837
  Xfa:  XF2326
  Nme:  NMB1640
  NmA:  NMA1894
  Rso:  RSc0903
  Cje:  Cj0326
  Atu:  AGl2260
  Sme:  SMc00640
  Bme:  BMEI0347
  Mlo:  mll3876
  Ccr:  CC3216
_______

[L] COG1933 Archaeal DNA polymerase II, large subunit
  Afu:  AF1722
  Hbs:  VNG2338G
  Mac:  MA4552
  Mth:  MTH1536
  Mja:  MJ1630
  Mka:  MK1650
  Tac:  Ta0036m
  Tvo:  TVN0035
  Pho:  PH0121_1 PH0121_3
  Pab:  PAB2404_1 PAB2404_3
_______

[S] COG1934 Uncharacterized protein conserved in bacteria
  Aae:  aq_2173
  Syn:  slr0250
  Nos:  alr4067
  Eco:  yhbN
  EcZ:  ZyhbN
  Ecs:  ECs4079
  Ype:  YPO3580
  Sty:  STM3318
  Vch:  VC2527
  Pae:  PA4460
  Hin:  HI1149m
  Pmu:  PM0172
  Xfa:  XF1410
  Nme:  NMB0355
  NmA:  NMA2132
  Rso:  RSc0410
  Hpy:  HP1568
  jHp:  jhp1476
  Cje:  Cj0649
  Atu:  AGc585
  Sme:  SMc01137
  Bme:  BMEI1791
  Mlo:  mll3198
  Ccr:  CC3601
_______

[S] COG1935 Uncharacterized conserved protein
  Afu:  AF1250
  Mac:  MA4414
  Mja:  MJ0105
  Mka:  MK0997
  Pho:  PH0127
  Pab:  PAB0076
_______

[F] COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases)
  Afu:  AF2001
  Hbs:  VNG1031C
  Mac:  MA3730
  Mth:  MTH1619
  Mja:  MJ1050
  Mka:  MK1060
  Tac:  Ta0570
  Tvo:  TVN0622
  Pho:  PH1255
  Pab:  PAB0757
  Pya:  PAE2972
  Sso:  SSO0461
  Ape:  APE2094
  Sce:  YDL166c
  Spo:  SPCC830.11c
  Ecu:  ECU10g0960
_______

[S] COG1937 Uncharacterized protein conserved in bacteria
  Dra:  DR2449 DRA0156
  Cac:  CAC2268 CAC3656
  Cgl:  Cgl0056 Cgl0381
  Mtu:  Rv0190 Rv0967 Rv1766
  MtC:  MT0200 MT0995 MT1816
  Mle:  ML2609
  Lla:  L195720
  Sau:  SA0045 SA0081 SA1890
  Lin:  lin1654 lin1968
  Bsu:  BS_yrkD BS_yvgZ
  Bha:  BH0558
  Syn:  sll0176
  Nos:  all2756
  Eco:  yaiN yohL
  EcZ:  ZyaiN ZyohL
  Ecs:  ECs0412 ECs2911
  Sty:  STM1628 STM3023
  Pae:  PA1298
  Rso:  RSp0553
  Cje:  Cj0510c
  Atu:  AGc1623
  Sme:  SMa1639 SMc04168
_______

[R] COG1938 Archaeal enzymes of ATP-grasp superfamily
  Afu:  AF1251
  Hbs:  VNG0500G
  Mac:  MA4415
  Mth:  MTH1302
  Mja:  MJ0106
  Mka:  MK0996
  Tac:  Ta1441
  Tvo:  TVN0115
  Pho:  PH0126
  Pab:  PAB0075
  Pya:  PAE0779 PAE3574
  Sso:  SSO0273 SSO0921 SSO5544
  Ape:  APE0104 APE2018
_______

[S] COG1939 Uncharacterized protein conserved in bacteria
  Tma:  TM1740
  Fnu:  FN1578
  Cac:  CAC3156
  Lla:  L101219
  Spy:  SPy1940
  Spn:  SP0592
  Sau:  SA0489
  Lin:  lin0272
  Bsu:  BS_yazC
  Bha:  BH0112
  Syn:  slr0954
  Nos:  alr1158
_______

[KG] COG1940 Transcriptional regulator/sugar kinase
  Afu:  AF1968
  Hbs:  VNG2629G
  Tac:  Ta0825
  Tvo:  TVN0728
  Pya:  PAE3437
  Ape:  APE2091
  Aae:  aq_1496
  Tma:  TM0032 TM0110 TM0393 TM0411 TM0808 TM1224 TM1469
        TM1847
  Fnu:  FN0790 FN1164 FN1474
  Dra:  DR0823 DR2296
  Cac:  CAC0933 CAC1086 CAC1523 CAC2613 CAC3673
  Cgl:  Cgl0009 Cgl0122 Cgl1864 Cgl2137 Cgl2595
  Mtu:  Rv0485 Rv0650 Rv2702
  MtC:  MT0503 MT0679 MT2776
  Mle:  ML1023
  Lla:  L117718 L118696 L84096
  Spy:  SPy0258 SPy1529 SPy1596 SPy1811
  Spn:  SP0171 SP0473 SP0668 SP1324 SP1675 SP1721 SP2142
  Sau:  SA0041 SA0305 SA1377
  Lin:  lin0031 lin0217 lin0520 lin0770 lin0809 lin1376 lin2907
        lin2928
  Bsu:  BS_glcK BS_xylR BS_ydhR
  Bha:  BH0700 BH0786 BH0797 BH1094 BH1425 BH2758
  Syn:  slr0329
  Nos:  all1371 all5002 alr1982
  Eco:  alsK mlc nagC nanK yajF ycfX yphH
  EcZ:  Zmlc ZnagC ZyajF ZycfX ZyhcI ZyphH
  Ecs:  ECs0444 ECs0706 ECs1497 ECs2300 ECs3416 ECs4095
  Ype:  YPO1629 YPO1891 YPO2036 YPO2268 YPO2625 YPO3020 YPO3211
  Sty:  STM0393 STM0682 STM1220 STM1488 STM3336 STM3681
  Vch:  VC0270 VC0993 VC1532 VC1782 VC2007
  Hin:  HI0144 HI0182
  Pmu:  PM0642 PM0675 PM0683 PM1375 PM1712
  Atu:  AGc4728 AGc93 AGl1298 AGl2504 AGl3149 AGl3541 AGl455
        AGl592 AGl609 AGl95
  Sme:  SMa2004 SMa2303 SMb20465 SMb20901 SMb21222 SMc02172 SMc02470
        SMc02880 SMc03109 SMc03816 SMc03817
  Bme:  BMEII0106 BMEII0857_2
  Mlo:  mll3638 mll7583 mll8569 mlr3412 mlr3714 mlr4209 mlr7234
  Ccr:  CC1134 CC1792 CC2465
  Bbu:  BB0693 BB0831
  Mpu:  MYPU_2280
_______

[C] COG1941 Coenzyme F420-reducing hydrogenase, gamma subunit
  Afu:  AF1373
  Mac:  MA0977
  Mth:  MTH1135 MTH1298
  Mja:  MJ0031 MJ0726 MJ1191
  Mka:  MK0179 MK0267 MK0538 MK0930
  Pho:  PH1292
  Pab:  PAB0640 PAB1786
  Syn:  sll1224
  Nos:  alr0764
_______

[R] COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
  Afu:  AF0669
  Mth:  MTH1606
  Cgl:  Cgl0062
  Lla:  L168282
  Spy:  SPy1139
  Spn:  SP1017
  Sau:  SAS044
  Lin:  lin2709
  Bsu:  BS_ywhB
  Bha:  BH3814
  Nos:  asr0697
  Eco:  ydcE
  EcZ:  ZydcE
  Ecs:  ECs2064
  Ype:  YPO3989
  Xfa:  XF1725
  Nme:  NMB1474
  NmA:  NMA1685
  Rso:  RSc0807 RSp0893 RSp1151 RSp1645
  Hpy:  HP0924
  jHp:  jhp0858
  Cje:  Cj0270 Cj1255
  Atu:  AGl1698
  Sme:  SMb20209 SMc04314
  Mlo:  mll7825 msl1978 msl4326
  Ccr:  CC2975
_______

[L] COG1943 Transposase and inactivated derivatives
  Hbs:  VNG0043H VNG0285C VNG2653C VNG6182H
  Mac:  MA0257 MA3362
  Tac:  Ta0474
  Tvo:  TVN0469 TVN0750 TVN0843
  Sso:  SSO1474 SSO9043
  Tma:  TM0048 TM0777 TM1832
  Fnu:  FN1675 FN1677
  Dra:  DR0177 DR0667 DR0979 DR1382 DR1592 DR1652 DR1927
        DR1932 DR2323
  Cac:  CAC3531
  MtC:  MT3204
  Spn:  SP1064 SP1622
  Bha:  BH0176 BH0269 BH1642 BH1895 BH2842 BH3233 BH3466
        BH3478
  Nos:  all2167 all3371 all4950 alr1015 alr1685 alr4734 alr7009
        alr7086 alr7149 alr8071 asl7246
  Eco:  yafM
  EcZ:  Z5815 ZyafM
  Ecs:  ECs0255 ECs3277 ECs5182
  Ype:  YPMT1.37c YPO0018 YPO0094 YPO0204 YPO0300 YPO0356 YPO0479
        YPO0487 YPO0534 YPO0541 YPO0583 YPO0696 YPO0697 YPO0726
        YPO0925 YPO1036 YPO1099 YPO1164 YPO1173 YPO1223 YPO1263
        YPO1369 YPO1406 YPO1424 YPO1434 YPO1521 YPO1592 YPO1602
        YPO1609 YPO1794 YPO2023 YPO2033 YPO2121 YPO2311 YPO2343
        YPO2353 YPO2395 YPO2629 YPO2764 YPO2826 YPO2869 YPO2900
        YPO2917 YPO2928 YPO2985 YPO2996 YPO3060 YPO3072 YPO3178
        YPO3187 YPO3195 YPO3280 YPO3291 YPO3299 YPO3329 YPO3416
        YPO3433 YPO3535 YPO3567 YPO3642 YPO3745 YPO3764 YPO3810
        YPO3853 YPO3968
  Sty:  PSLT036 STM0946 STM1957 STM2471 STM3032 STM3479 STM4311
  Vch:  VC0870 VCA0202 VCA0275 VCA0493
  Pae:  PA1154
  Hin:  HI0217 HI0554
  Nme:  NMB1464
  NmA:  NMA0532 NMA1155 NMA1675
  Rso:  RSc2966
  Hpy:  HP0414 HP0437 HP0988 HP0998 HP1008 HP1096 HP1535
  jHp:  jhp0827
  Mlo:  mll6832 mll6834 mll6836 msl6830 msl6833
  Ccr:  CC1445
_______

[S] COG1944 Uncharacterized conserved protein
  Hbs:  VNG1410H
  Mac:  MA0165
  Mth:  MTH987
  Mja:  MJ1094
  Mka:  MK0115
  Mtu:  Rv1375
  MtC:  MT1419
  Eco:  ycaO
  EcZ:  ZycaO
  Ecs:  ECs0988
  Ype:  YPO1385
  Sty:  STM0975
  Pae:  PA1926
  Hin:  HI1265
  Pmu:  PM0687
  Atu:  AGl2518
  Sme:  SMc01413 SMc01541
  Mlo:  mll0574 mlr7074
_______

[S] COG1945 Uncharacterized conserved protein
  Afu:  AF1630 AF2301 AF2431
  Hbs:  VNG1999H
  Mac:  MA3012 MA3496
  Mth:  MTH870
  Mja:  MJ0316
  Mka:  MK0740
  Tac:  Ta0778
  Tvo:  TVN0762
  Pho:  PH1609
  Pab:  PAB0382
  Ctr:  CT373
  Cpn:  CPn1032
_______

[I] COG1946 Acyl-CoA thioesterase
  Sce:  YJR019c
  Ecu:  ECU05g1520
  Cgl:  Cgl1624
  Mtu:  Rv1618 Rv2605c
  MtC:  MT1654 MT2680
  Mle:  ML1278
  Eco:  tesB
  EcZ:  ZtesB
  Ecs:  ECs0506
  Ype:  YPO3141
  Sty:  STM0464
  Vch:  VC1063
  Pae:  PA2871 PA3942
  Hin:  HI0076
  Pmu:  PM0570
  Xfa:  XF1021
  Atu:  AGc4997
  Sme:  SMc03805
  Bme:  BMEI0166
  Mlo:  mll4250
  Ccr:  CC1800 CC3649
_______

[I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase
  Aae:  aq_915
  Tma:  TM1383
  Fnu:  FN0021
  Dra:  DR2605
  Cac:  CAC2902
  Cgl:  Cgl0887
  Mtu:  Rv1011
  MtC:  MT1040
  Mle:  ML0242
  Sau:  SA0453
  Lin:  lin0229
  Bsu:  BS_yabH
  Bha:  BH0061
  Syn:  sll0711
  Nos:  alr3230
  Eco:  ychB
  EcZ:  ZychB
  Ecs:  ECs1713
  Ype:  YPO2014
  Sty:  STM1779
  Buc:  BU170
  Vch:  VC2182
  Pae:  PA4669
  Hin:  HI1608
  Pmu:  PM0245
  Xfa:  XF2645
  Nme:  NMB0874
  NmA:  NMA1092
  Rso:  RSc0396
  Hpy:  HP1443
  jHp:  jhp1336
  Cje:  Cj1104
  Atu:  AGc1122
  Sme:  SMc00862
  Bme:  BMEI1537
  Mlo:  mll7422
  Ccr:  CC1336
  Ctr:  CT804
  Tpa:  TP0371
  Uur:  UU600
_______

[L] COG1948 ERCC4-type nuclease
  Afu:  AF1458_2 AF2418
  Hbs:  VNG2356G_2
  Mac:  MA0096_2
  Mth:  MTH1415_2
  Mja:  MJ1505_2
  Mka:  MK1678_2
  Pho:  PH1896m_2
  Pab:  PAB0190_2
  Pya:  PAE1735
  Sso:  SSO0729
  Ape:  APE1436
  Sce:  YDR386w YPL022w
  Spo:  SPCC4G3.05c SPCC970.01
  Ecu:  ECU02g1390 ECU08g0760
_______

[A] COG1949 Oligoribonuclease (3'->5' exoribonuclease)
  Sce:  YLR059c
  Spo:  SPBC1347.07
  Cgl:  Cgl2421
  Mtu:  Rv2511
  MtC:  MT2586
  Mle:  ML0427
  Eco:  orn
  EcZ:  Zorn
  Ecs:  ECs5141
  Ype:  YPO0366
  Sty:  STM4350
  Buc:  BU574
  Vch:  VC0341
  Pae:  PA4951
  Hin:  HI1715
  Pmu:  PM0900
  Xfa:  XF1257
  Nme:  NMB1863
  NmA:  NMA0594
  Rso:  RSc0942
_______

[S] COG1950 Predicted membrane protein
  Dra:  DR1165
  Cgl:  Cgl0218
  Mtu:  Rv1903
  MtC:  MT1954
  Mle:  ML2012
  Lin:  lin2627
  Bsu:  BS_yvlD
  Bha:  BH3591
  Syn:  slr0284
  Nos:  all0164 alr0645 alr2746
  Rso:  RSc0092
_______

[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
  Afu:  AF1099
  Mac:  MA2497
  Mth:  MTH1735 MTH963
  Mja:  MJ1294
  Mka:  MK0085
  Pho:  PH1683
  Pab:  PAB2030
  Pya:  PAE2132
  Aae:  aq_1780
  Tma:  TM0540
  Cac:  CAC3091
  Bha:  BH0894_1
  Eco:  fumA_1 fumB_1 ttdA
  EcZ:  Z0887_1 ZfumA_1 ZfumB_1 ZttdA
  Ecs:  ECs0757_1 ECs2318_1 ECs3944 ECs5104_1
  Ype:  YPO3335_1
  Sty:  STM0762 STM1468_1 STM3355 STM4300_1
  Vch:  VC1304_1
  Pae:  PA4333_1
  Xfa:  XF1855_1
  Nme:  NMB1613_1
  NmA:  NMA1812_1
  Rso:  RSc1955_1
  Bme:  BMEI1016_1
  Mlo:  mlr6099_1
_______

[U] COG1952 Preprotein translocase subunit SecB
  Mja:  MJ0357
  Eco:  secB
  EcZ:  ZsecB
  Ecs:  ECs4487
  Ype:  YPO0067
  Sty:  STM3701
  Buc:  BU053
  Vch:  VC2653
  Pae:  PA5128
  Hin:  HI0743
  Pmu:  PM1432
  Xfa:  XF1801
  Nme:  NMB1789
  NmA:  NMA0674
  Rso:  RSc0356
  Atu:  AGc9
  Sme:  SMc02788
  Bme:  BMEI2055
  Mlo:  mll4541
  Ccr:  CC3742
  Rpr:  RP070
  Rco:  RC0100
_______

[FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases
  Sso:  SSO1905 SSO2042
  Ape:  APE1382
  Sce:  YBL042c YBR021w YIR028w YLR237w YOR071c YOR192c
  Spo:  SPAC1399.03 SPAC29B12.14c SPBC1683.05
  Bsu:  BS_ywoE
  Eco:  ybbW
  EcZ:  Z0665
  Ecs:  ECs0572
  Ype:  YPO1083
  Sty:  STM0522
  Pae:  PA0443 PA0476
  Rso:  RSc1233
  Sme:  SMc00922
  Bme:  BMEI0155
  Mlo:  mlr0604
  Ccr:  CC2347
_______

[K] COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding)
  Tma:  TM1431 TM1436
  Fnu:  FN0333
  Cac:  CAC1320
  Sau:  SA1139
  Lin:  lin1442
  Bsu:  BS_glpP
  Bha:  BH1075 BH1091
  Eco:  ygcP
  EcZ:  ZygcP
  Ecs:  ECs3623
_______

[NU] COG1955 Archaeal flagella assembly protein J
  Afu:  AF1048
  Hbs:  VNG0947G
  Mac:  MA3055 MA3083
  Mja:  MJ0901
  Tac:  Ta0560
  Tvo:  TVN0614
  Pho:  PH0559
  Pab:  PAB1387
  Sso:  SSO2315
  Ape:  APE1895
_______

[T] COG1956 GAF domain-containing protein
  Hbs:  VNG0750C
  Tac:  Ta0848
  Tvo:  TVN0820
  Sce:  YKL069w
  Tma:  TM0519
  Cac:  CAC2110
  Lla:  L63900
  Spy:  SPy1365
  Spn:  SP0864
  Sau:  SA1540
  Lin:  lin1637
  Bsu:  BS_ytsP
  Bha:  BH3208
  Eco:  yebR
  EcZ:  Z2879
  Ecs:  ECs2542
  Ype:  YPO1703
  Sty:  STM1847
  Vch:  VC1498
  Pae:  PA2822
  Pmu:  PM1133
  Xfa:  XF1230
  Nme:  NMB1886
  NmA:  NMA0571
  Mlo:  mll2226
  Ccr:  CC2279
_______

[F] COG1957 Inosine-uridine nucleoside N-ribohydrolase
  Sso:  SSO0505 SSO11870 SSO2243 SSO3062
  Sce:  YDR400w
  Spo:  SPAC17G8.02 SPBC1683.06c SPBC800.11
  Dra:  DR0403
  Cgl:  Cgl1329 Cgl1931 Cgl2774
  Mtu:  Rv3393
  MtC:  MT3500
  Sau:  SA0234 SA2078
  Bha:  BH0417
  Nos:  alr0289 alr3202 alr3285
  Eco:  yaaF ybeK yeiK
  EcZ:  ZyaaF ZybeK ZyeiK
  Ecs:  ECs0033 ECs0690 ECs3054
  Sty:  STM0051 STM0661
  Pae:  PA0143
  Pmu:  PM1767
  Rso:  RSc2548
  Cje:  Cj0340
  Atu:  AGc2923 AGc654 AGl885
  Sme:  SMb21277 SMc01105 SMc03175
  Bme:  BMEII0088
  Mlo:  mll3190 mlr2009 msl7102
  Ccr:  CC1928 CC2615
_______

[K] COG1958 Small nuclear ribonucleoprotein (snRNP) homolog
  Afu:  AF0362 AF0875
  Hbs:  VNG1496G
  Mac:  MA1413 MA3195
  Mth:  MTH1440 MTH649
  Mka:  MK0220
  Tac:  Ta0927 Ta1240
  Tvo:  TVN0356 TVN1075
  Pho:  PHS042
  Pab:  PAB8160
  Pya:  PAE0676 PAE0790 PAE2122
  Sso:  SSO0276 SSO5410 SSO6454
  Ape:  APE0958a APES022
  Sce:  YBL026w YCR020c-a YDR378c YER029c YER112w YER146w YFL017w-a
        YGR074w YJL124c YJR022w YLR147c YLR275w YLR438c-a YNL147w
        YOR159c YPR182w
  Spo:  SPAC26A3.08 SPAC27D7.07c SPAC2C4.03c SPAC2F3.17c SPBC11G11.06c SPBC19C2.14 SPBC20F10.09
        SPBC30D10.06 SPBC3D6.08c SPBC3E7.14 SPBC4B4.05 SPBC9B6.05c SPCC1620.01c SPCC1840.10
        SPCC285.12
  Ecu:  ECU01g0545 ECU02g1020 ECU03g0360 ECU03g0840 ECU04g0790 ECU05g0910i ECU05g1310
        ECU06g1140 ECU07g1830 ECU08g0135 ECU09g1805 ECU10g1580 ECU11g2070
_______

[K] COG1959 Predicted transcriptional regulator
  Aae:  aq_268
  Tma:  TM0567 TM1527
  Fnu:  FN0893 FN1093 FN1216
  Dra:  DR2094 DR2201 DRA0242
  Cac:  CAC0115 CAC1675 CAC2236 CAC3525
  Mtu:  Rv1287
  MtC:  MT1325
  Lla:  L153086
  Spn:  SP1636
  Sau:  SA0552 SA1453
  Lin:  lin0458 lin0640 lin1550 lin2461
  Bsu:  BS_yhdE BS_yrzC BS_ywgB BS_ywnA
  Bha:  BH0306 BH0656 BH1057 BH1259 BH3125
  Syn:  slr0846
  Nos:  alr2081 alr4551
  Eco:  yfhP yjeB
  EcZ:  Z3798 ZyjeB
  Ecs:  ECs3397 ECs5154
  Ype:  YPO0379 YPO2897
  Sty:  STM2544 STM4367
  Vch:  VC0747
  Pae:  PA2692 PA3815 PA4169
  Hin:  HI0379
  Pmu:  PM0317
  Xfa:  XF1477
  Nme:  NMB0437 NMB1378
  NmA:  NMA1593 NMA2048
  Rso:  RSc1018 RSc3397 RSp0526
  Cje:  Cj0883c
  Atu:  AGc1499 AGc344 AGc402 AGc872 AGl1131 AGl2335 AGl2338
        AGl2343 AGl2801
  Sme:  SMb20994 SMc00785 SMc01160 SMc02238 SMc02267
  Bme:  BMEII0180 BMEII0707
  Mlo:  mll1642 mll4516 mlr1147 mlr1674
  Ccr:  CC0132 CC1866 CC2625
  Rpr:  RP488
  Rco:  RC0732 RC0821
_______

[I] COG1960 Acyl-CoA dehydrogenases
  Afu:  AF0199 AF0436 AF0498 AF0671 AF0845 AF0964 AF0991
        AF1026 AF1141 AF1175 AF1293 AF2057 AF2244 AF2275
  Hbs:  VNG0371G VNG0679G VNG0775G VNG1191Gm VNG1482G VNG2499G
  Tac:  Ta0230 Ta0294 Ta0295m Ta0398 Ta0646 Ta0974 Ta1465
  Tvo:  TVN0670 TVN1120 TVN1175 TVN1269 TVN1305 TVN1306 TVN1307
        TVN1343
  Pya:  PAE1378 PAE2070 PAE2475 PAE2491
  Sso:  SSO1153 SSO1156 SSO1598 SSO2060 SSO2497 SSO2511 SSO2761
        SSO2877 SSO3145
  Ape:  APE0385 APE0739 APE1681 APE2158 APE2354
  Sce:  YGL205w
  Fnu:  FN0783 FN1424_1 FN1535
  Dra:  DR0551 DR0922 DR1255 DR1318 DR1544 DR2361 DRA0133
        DRA0196 DRA0250 DRA0337
  Cac:  CAC2711
  Cgl:  Cgl0288 Cgl0987 Cgl0988 Cgl1248 Cgl1249
  Mtu:  Rv0131c Rv0154c Rv0215c Rv0231 Rv0244c Rv0271c Rv0400c
        Rv0672 Rv0752c Rv0873 Rv0972c Rv0975c Rv1346 Rv1467c
        Rv1679 Rv1933c Rv1934c Rv2500c Rv2724c Rv2789c Rv3061c
        Rv3094c Rv3139 Rv3140 Rv3274c Rv3504 Rv3505 Rv3543c
        Rv3544c Rv3560c Rv3562 Rv3563 Rv3564 Rv3570c Rv3573c
        Rv3797
  MtC:  MT0139 MT0163 MT0225 MT0241 MT0258 MT0284 MT0410
        MT0701 MT0776 MT0896 MT1000 MT1003 MT1388 MT1514
        MT1719 MT1983 MT1984 MT2575 MT2796 MT2859 MT3147
        MT3178 MT3226 MT3227 MT3374 MT3608 MT3609 MT3647
        MT3648 MT3665 MT3667 MT3668 MT3669 MT3675 MT3678
        MT3904
  Mle:  ML0660 ML0661 ML0737 ML2563
  Sau:  SA0169 SA0225 SA2080
  Bsu:  BS_acdA BS_mmgC BS_ydbM BS_yngJ BS_yusJ
  Bha:  BH1130 BH2178 BH3486 BH3798 BH3799
  Nos:  alr2678_2 alr4058_1
  Eco:  aidB caiA yafH ydiO
  EcZ:  Z2723 ZaidB ZcaiA ZyafH
  Ecs:  ECs0042 ECs0248 ECs2402 ECs5163
  Ype:  YPO0383 YPO3244
  Sty:  STM0073 STM0309 STM0857 STM1356 STM4377
  Vch:  VC1740 VC2231
  Pae:  PA0447 PA0506 PA0507 PA0508 PA0746 PA0879 PA1020
        PA1022 PA1187 PA1284 PA1535 PA1631 PA2015 PA2324
        PA2325 PA2330 PA2346 PA2347 PA2355 PA2550 PA2552
        PA2597 PA2815 PA2889 PA3593 PA3972 PA4199 PA4349
        PA4435 PA4979 PA4994 PA4995 PA5020 PA5187
  Nme:  NMB0994 NMB1280
  NmA:  NMA1202 NMA1490
  Rso:  RSc0121 RSc0274 RSc0279 RSc0473 RSc0537 RSc0756 RSc0925
        RSc1762 RSc2020 RSc2044 RSc2045 RSp0036 RSp0219 RSp0652
        RSp0687 RSp1474
  Atu:  AGc1328 AGc2410 AGc2611 AGc4598 AGc4660 AGc885 AGl2707
        AGl2714 AGl2776 AGl2789 AGl2799 AGl896 AGpA773 AGpT133
        AGpT142
  Sme:  SMa1400 SMa2073 SMa2089 SMa2091 SMb20753 SMb20993 SMb21121
        SMb21181 SMc00977 SMc01359 SMc01639 SMc02229
  Bme:  BMEI0689 BMEI0897 BMEI1521 BMEI1923 BMEII0213 BMEII0492 BMEII0495
        BMEII0671 BMEII0818 BMEII1023
  Mlo:  mll0685 mll2878 mll3094 mll5430 mll7732 mlr1201 mlr5042
        mlr5225 mlr5624 mlr5626 mlr6975 mlr7452
  Ccr:  CC0079 CC0080 CC0427 CC0690 CC1110 CC1310 CC1311
        CC1350 CC1798 CC1806 CC1807 CC2049 CC2050 CC2131
        CC2172 CC2328 CC2478 CC2479 CC3087 CC3393 CC3454
_______

[L] COG1961 Site-specific recombinases, DNA invertase Pin homologs
  Tvo:  TVN0695 TVN1478
  Pho:  PH1174
  Pya:  PAE3513
  Dra:  DRC0005
  Cac:  CAC1228 CAC1865 CAC1951 CAC1956 CAC2247 CAP0081
  Cgl:  Cgl1671
  Mtu:  Rv1586c
  MtC:  MT3573
  Spy:  SPy0655
  Spn:  SP1040
  Sau:  SA0057 SA0058 SAP013 SAP015_2
  Lin:  lin1231 lin1623 lin2426 pli0056 pli0059
  Bsu:  BS_spoIVCA BS_yefB BS_yefC BS_yneB BS_yokA
  Bha:  BH2354
  Syn:  sll0177
  Nos:  alr1459 alr2075
  Eco:  pin pinQ pinR yagL ybcK
  EcZ:  Z1871 Z3622 Z5885 ZpinH
  Ecs:  ECs0284 ECs1615 ECs3240 ECs4992 ECs5249
  Ype:  YPCD1.91 YPMT1.70
  Sty:  PSLT045 STM1865 STM2702 STM2772
  Vch:  VCA0795
  Pae:  PA3867
  Xfa:  XF2028 XFa0019
  Rso:  RSc0891 RSc3171 RSc3247
  Atu:  AGl1981 AGpA54 AGpT97
  Sme:  SMa0785 SMb20119 SMc02287 SMc02300
  Bme:  BMEI0901 BMEI0902 BMEI1661
  Mlo:  mll4708 mll6222 mll8116 mlr4033 mlr4668 mlr6049 mlr6326
        mlr9024 mlr9265 mlr9562 msl9639 msr9403
  Ccr:  CC3371
_______

[H] COG1962 Tetrahydromethanopterin S-methyltransferase, subunit H
  Afu:  AF0009
  Mac:  MA0269 MA1804
  Mth:  MTH1156
  Mja:  MJ0854
  Mka:  MK0662
_______

[S] COG1963 Uncharacterized protein conserved in bacteria
  Tma:  TM1239
  Dra:  DR2066
  Lla:  L26878
  Lin:  lin2485
  Bsu:  BS_yuiD
  Bha:  BH3402
  Syn:  slr1394
  Nos:  alr0214
  Tpa:  TP0153
  Bbu:  BB0070
_______

[R] COG1964 Predicted Fe-S oxidoreductases
  Afu:  AF2316
  Mac:  MA1114 MA1486
  Mth:  MTH831
  Mja:  MJ0619
  Mka:  MK1074
  Tac:  Ta0670
  Tvo:  TVN0932
  Pho:  PH1458
  Pab:  PAB1899_1 PAB1899_3
  Pya:  PAE2284
  Sso:  SSO0235
  Ape:  APE2598
  Mtu:  Rv3729_1
  MtC:  MT3833_1
_______

[P] COG1965 Protein implicated in iron transport, frataxin homolog
  Sce:  YDL120w
  Spo:  SPCC1183.03c
  Ecu:  ECU01g1310
  Eco:  cyaY
  EcZ:  ZcyaY
  Ecs:  ECs4738
  Ype:  YPO3847
  Sty:  STM3943
  Buc:  BU590
  Vch:  VC0123
  Pae:  PA5275
  Hin:  HI0727.1
  Pmu:  PM1425
  Nme:  NMB1978
  NmA:  NMA0466
  Rso:  RSc2977
  Rpr:  RP323
  Rco:  RC0443
_______

[T] COG1966 Carbon starvation protein, predicted membrane protein
  Mac:  MA1905
  Pab:  PAB1554
  Pya:  PAE1423
  Ape:  APE2162
  Aae:  aq_1265
  Fnu:  FN0221
  Cac:  CAC1669
  Cgl:  Cgl0635
  Mtu:  Rv3063
  MtC:  MT3149
  Lla:  L13150
  Bsu:  BS_cstA
  Bha:  BH1793
  Eco:  cstA yjiY
  EcZ:  ZcstA ZyjiY
  Ecs:  ECs0637 ECs5313
  Ype:  YPO2234 YPO3784
  Sty:  STM0600 STM4532
  Vch:  VC0687
  Pae:  PA4606
  Hin:  HI1126.1 HI1127
  Pmu:  PM0132
  Nme:  NMB1493
  NmA:  NMA1698
  Rso:  RSc0022
  Hpy:  HP1168
  jHp:  jhp1095
  Cje:  Cj0917c
_______

[S] COG1967 Predicted membrane protein
  Afu:  AF0462
  Hbs:  VNG1409C VNG1852H
  Mac:  MA3687
  Mth:  MTH1480
  Mja:  MJ0440
  Pho:  PH0129 PH1898
  Pab:  PAB0078 PAB0188
_______

[V] COG1968 Uncharacterized bacitracin resistance protein
  Mth:  MTH1428 MTH1429
  Mka:  MK1212
  Pya:  PAE0576
  Sso:  SSO1860
  Aae:  aq_2195
  Tma:  TM0893
  Fnu:  FN1702
  Dra:  DR0454
  Cac:  CAC0501 CAC0963
  Cgl:  Cgl1479
  Mtu:  Rv2136c
  MtC:  MT2194
  Mle:  ML1297
  Lla:  L58643
  Spy:  SPy0280
  Spn:  SP0457
  Sau:  SA0638
  Bsu:  BS_yubB
  Bha:  BH0464 BH1521
  Syn:  sll0210
  Nos:  all1214
  Eco:  bacA
  EcZ:  ZbacA
  Ecs:  ECs3940
  Ype:  YPO0649
  Sty:  STM3205
  Buc:  BU062
  Vch:  VC0526
  Pae:  PA1959
  Xfa:  XF1841
  Nme:  NMB0408
  NmA:  NMA2077
  Rso:  RSc0701
  Cje:  Cj0205
  Atu:  AGc1833 AGc505
  Sme:  SMc00408
  Bme:  BMEII0258
  Mlo:  mll4634 mlr0116
  Ccr:  CC3605
  Bbu:  BB0258
_______

[C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit
  Aae:  aq_665
  Eco:  hyaC
  EcZ:  ZhyaC
  Ecs:  ECs1130
  Sty:  STM1537 STM1788
  Hpy:  HP0633
  jHp:  jhp0576
  Cje:  Cj1265c
_______

[M] COG1970 Large-conductance mechanosensitive channel
  Mac:  MA2285
  Fnu:  FN0766
  Dra:  DR2422
  Cgl:  Cgl0854
  Mtu:  Rv0985c
  MtC:  MT1013
  Mle:  ML0178
  Lla:  L153973
  Spy:  SPy0780
  Spn:  SP1010
  Sau:  SA1182
  Lin:  lin2170
  Bsu:  BS_ywpC
  Syn:  slr0875
  Eco:  mscL
  EcZ:  ZmscL
  Ecs:  ECs4156
  Ype:  YPO0238
  Sty:  STM3410
  Vch:  VCA0612
  Pae:  PA4614
  Hin:  HI0626
  Pmu:  PM1564
  Xfa:  XF0039
  Rso:  RSc2930
  Atu:  AGc934
  Sme:  SMc02250
  Bme:  BMEI1605
  Mlo:  mll4699 mlr4713 mlr5692 mlr5747m
  Ccr:  CC3585
_______

[S] COG1971 Predicted membrane protein
  Mac:  MA3749
  Mth:  MTH1812
  Fnu:  FN1615
  Cac:  CAC0130 CAC0325 CAC0950
  Cgl:  Cgl1434
  Bsu:  BS_ytaF BS_ywlD
  Bha:  BH3151 BH3770
  Eco:  yebN
  EcZ:  Z2864
  Ecs:  ECs2531
  Ype:  YPO1754
  Sty:  STM1834
  Pae:  PA2910
  Xfa:  XF2257
  Nme:  NMB0215
  NmA:  NMA0052
  Cje:  Cj0167c
_______

[F] COG1972 Nucleoside permease
  Spy:  SPy1868
  Sau:  SA0302 SA0479 SA0600
  Bsu:  BS_nupC BS_yutK BS_yxjA
  Bha:  BH1446
  Nos:  all0378
  Eco:  nupC yeiJ yeiM
  EcZ:  ZnupC ZyeiJ ZyeiM
  Ecs:  ECs3053 ECs3056 ECs3272
  Ype:  YPO0435 YPO2983
  Sty:  STM2409
  Vch:  VC1953 VC2352 VCA0179
  Hin:  HI0519
  Pmu:  PM1292
  Hpy:  HP1180
  jHp:  jhp1106
  Ccr:  CC2089
_______

[O] COG1973 Hydrogenase maturation factor
  Afu:  AF2363
  Mac:  MA0914
  Mth:  MTH1525
  Mja:  MJ1416
  Mka:  MK1493
  Sso:  SSO0076
_______

[KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)
  Tma:  TM1082
  Dra:  DRA0344
  Cac:  CAC1793 CAC1832
  Cgl:  Cgl1884
  Mtu:  Rv2720
  MtC:  MT2793
  Mle:  ML1003
  Lla:  L0250_2
  Sau:  SA1174
  Lin:  lin1340
  Bsu:  BS_lexA
  Bha:  BH2356
  Syn:  sll1626
  Nos:  alr4908
  Eco:  lexA umuD ymfK
  EcZ:  Z0309 Z2090 Z3126 Z3358 ZlexA ZumuD
  Ecs:  ECs0274 ECs1185 ECs1678 ECs2209 ECs2766 ECs2990 ECs5026
  Ype:  YPO0314 YPO1233
  Sty:  PSLT055 STM1998 STM2230 STM4237
  Vch:  VC0092
  Pae:  PA3007
  Hin:  HI0749 HI1546
  Pmu:  PM0892 PM1181
  Xfa:  XF0122
  Rso:  RSc1304
  Atu:  AGc2577
  Sme:  SMc01183
  Bme:  BMEI0840
  Mlo:  mlr0626
  Ccr:  CC1902
_______

[O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
  Pya:  PAE2669
  Sso:  SSO1292 SSO2879
  Ape:  APE2227
  Dra:  DRA0129 DRA0179
  Mtu:  Rv0372c Rv0376c
  MtC:  MT0387
  Bsu:  BS_yurF
  Bha:  BH0750 BH1974
  Eco:  yagQ yqeB
  EcZ:  Z4214 ZyagQ
  Ecs:  ECs0313 ECs3748
  Pae:  PA1522 PA4618
  Rso:  RSc0628 RSc1463 RSc2097
  Atu:  AGc4205 AGpA731
  Sme:  SMb21288 SMc00517 SMc00518
  Bme:  BMEI1574
  Mlo:  mlr0091 mlr0092 mlr5136
  Ccr:  CC2617 CC3577
_______

[J] COG1976 Translation initiation factor 6 (eIF-6)
  Afu:  AF2065
  Hbs:  VNG2466a
  Mac:  MA4112
  Mth:  MTH1611
  Mja:  MJ0048
  Mka:  MK1616
  Tac:  Ta0055m
  Tvo:  TVN0011
  Pho:  PH0528
  Pab:  PAB1005
  Pya:  PAE3097
  Sso:  SSO0351
  Ape:  APE1085
  Sce:  YPR016c
  Spo:  SPCC1919.09
  Ecu:  ECU04g0780
_______

[H] COG1977 Molybdopterin converting factor, small subunit
  Afu:  AF0022 AF0552 AF1624 AF2105
  Hbs:  VNG1848H
  Mac:  MA1713 MA4086
  Tac:  Ta0647 Ta0895 Ta1019
  Tvo:  TVN0569 TVN0794
  Pab:  PAB3241 PAB3357
  Pya:  PAE0727_1 PAE2011 PAE2135 PAE2580 PAE3375
  Sso:  SSO2394_1
  Aae:  aq_1106a
  Dra:  DR2607_1
  Mtu:  Rv0868c Rv1335 Rv3112 Rv3323c_1
  MtC:  MT0891 MT1376.1 MT3194.1 MT3424_1
  Sau:  SA2065
  Lin:  lin1037
  Bsu:  BS_moaD
  Bha:  BH3018
  Syn:  slr0821 ssr1527
  Nos:  asl4353 asr3294
  Eco:  moaD
  EcZ:  ZmoaD
  Ecs:  ECs0862
  Ype:  YPO1161
  Sty:  STM0805
  Vch:  VC1027
  Pae:  PA3917
  Hin:  HI1674
  Pmu:  PM0623
  Rso:  RSc1331
  Hpy:  HP0801
  jHp:  jhp0737
  Cje:  Cj1517
  Atu:  AGc2086
  Sme:  SMc00600
  Bme:  BMEI1253
  Mlo:  msr7914
  Ccr:  CC0017
_______

[S] COG1978 Uncharacterized protein conserved in bacteria
  Aae:  aq_114
  Tma:  TM1582
  Cac:  CAC0166
  Bsu:  BS_ykuK
_______

[C] COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
  Tma:  TM0820
  Fnu:  FN1415
  Cac:  CAC3298 CAC3299 CAC3392
  Lin:  lin0563
  Bsu:  BS_yugJ BS_yugK
  Bha:  BH3344
  Nos:  alr4566
  Eco:  yqhD
  EcZ:  ZyqhD
  Ecs:  ECs3894
  Ype:  YPO0678
  Sty:  STM3164
  Vch:  VCA0702
  Pmu:  PM0149
_______

[G] COG1980 Archaeal fructose 1,6-bisphosphatase
  Afu:  AF1442
  Mth:  MTH1686
  Mja:  MJ0299
  Mka:  MK0954
  Tac:  Ta1428
  Tvo:  TVN1445
  Pho:  PH0759
  Pab:  PAB1515
  Pya:  PAE0944
  Sso:  SSO0286
  Ape:  APE1109
  Aae:  aq_1790
_______

[S] COG1981 Predicted membrane protein
  Syn:  slr1790
  Nos:  alr5217
  Pae:  PA0661
  Xfa:  XF0202
  Nme:  NMB0310
  NmA:  NMA2177
  Rso:  RSc2740
  Hpy:  HP1484
  jHp:  jhp1377
  Cje:  Cj0362
  Atu:  AGc5138
  Sme:  SMc02795
  Bme:  BMEI0002
  Mlo:  mll4486
  Ccr:  CC3761
  Rpr:  RP883
  Rco:  RC1372
_______

[E] COG1982 Arginine/lysine/ornithine decarboxylases
  Fnu:  FN0501_1
  Cac:  CAC0297 CAC2338
  Mtu:  Rv2531c
  MtC:  MT2607
  Mle:  ML0524
  Spn:  SP0916
  Sau:  SA0439
  Lin:  lin2842
  Bsu:  BS_cad BS_yaaO
  Bha:  BH0041 BH2640
  Syn:  sll1683
  Nos:  all4887
  Eco:  adiA cadA ldcC speC speF
  EcZ:  ZadiA ZcadA ZldcC ZspeC ZspeF
  Ecs:  ECs0188 ECs0721 ECs3841 ECs5099 ECs5113
  Ype:  YPO0960 YPO1201
  Sty:  STM0234 STM0701 STM2559 STM3114 STM4296
  Vch:  VC0281 VCA1063
  Pae:  PA1346 PA1818
  Hin:  HI0591
  Pmu:  PM0806
  Rso:  RSc2365
  Sme:  SMa0680 SMa0682
_______

[KT] COG1983 Putative stress-responsive transcriptional regulator
  Mac:  MA4106 MA4346
  Pho:  PH1080
  Pab:  PAB0603
  Tma:  TM1156
  Cac:  CAC2659
  Cgl:  Cgl0593_1 Cgl0957 Cgl1146
  Lla:  L157237 L157730
  Spy:  SPy0583
  Spn:  SP0910 SP1077
  Lin:  lin2628 lin2629_1
  Bsu:  BS_yvlC
  Bha:  BH3592
  Eco:  pspC
  EcZ:  ZpspC
  Ecs:  ECs1883
  Ype:  YPO2349
  Sty:  STM1688
  Vch:  VC1676
_______

[E] COG1984 Allophanate hydrolase subunit 2
  Pho:  PH0988
  Pab:  PAB1714
  Sce:  YBR208c_3
  Fnu:  FN0436
  Dra:  DRA0286
  Cgl:  Cgl0975
  Mtu:  Rv0263c
  MtC:  MT0276
  Mle:  ML2550
  Sau:  SA0673 SA1436
  Bsu:  BS_ycsJ_2
  Bha:  BH1818
  Eco:  ybgK
  EcZ:  ZybgK
  Ecs:  ECs0737
  Ype:  YPO2699
  Sty:  STM0713
  Vch:  VCA0778
  Pae:  PA0496 PA2110 PA4509
  Hin:  HI1730
  Nme:  NMB0229
  NmA:  NMA0029
  Rso:  RSc2170 RSp0938
  Cje:  Cj1543
  Atu:  AGl1174 AGl1866_2
  Ccr:  CC1829_2
_______

[H] COG1985 Pyrimidine reductase, riboflavin biosynthesis
  Afu:  AF2007
  Hbs:  VNG1256G
  Mac:  MA4092 MA4367
  Mth:  MTH235
  Mja:  MJ0671
  Mka:  MK0098
  Pya:  PAE2985
  Sso:  SSO2097
  Ape:  APE1279
  Sce:  YBR153w
  Spo:  SPBC21C3.10c
  Aae:  aq_138_2 aq_436
  Tma:  TM1828_2
  Fnu:  FN1506_2
  Dra:  DR0153_2
  Cac:  CAC0590_2
  Cgl:  Cgl0956 Cgl1559_2 Cgl1850
  Mtu:  Rv1409_2 Rv2671
  MtC:  MT1453_2 MT2745
  Mle:  ML0555_2 ML1340
  Lla:  L0163_2
  Spn:  SP0178_2
  Sau:  SA1589_2
  Bsu:  BS_ribG_2
  Bha:  BH1554_2
  Syn:  slr0066_2
  Nos:  all0082_2 all4103
  Eco:  ribD_2
  EcZ:  ZribD_2
  Ecs:  ECs0467_2
  Ype:  YPO3183_2
  Sty:  STM0416_2
  Buc:  BU462
  Vch:  VC2271_2
  Pae:  PA4056_2
  Hin:  HI0944_2
  Pmu:  PM0749_2
  Xfa:  XF0950_2 XF1748
  Nme:  NMB1817_2
  NmA:  NMA0644_2
  Rso:  RSc0715_2
  Hpy:  HP1505_2
  jHp:  jhp1398_2
  Cje:  Cj1622_2
  Atu:  AGc2159_2
  Sme:  SMc01772_2
  Bme:  BMEI1189_2
  Mlo:  mlr2151 mlr8405_2
  Ccr:  CC0885_2
  Ctr:  CT730_2
  Cpn:  CPn0871_2
_______

[S] COG1986 Uncharacterized conserved protein
  Afu:  AF0901
  Mth:  MTH1897
  Mja:  MJ0261
  Mka:  MK1503
  Tac:  Ta1194_2
  Tvo:  TVN0403_2
  Pya:  PAE2808
  Sso:  SSO2230
  Ape:  APE0788
  Bha:  BH3256
  Eco:  yjjX
  EcZ:  ZyjjX
  Ecs:  ECs5352
  Ype:  YPO0454
  Sty:  STM4584
  Vch:  VC0702
_______

[NU] COG1987 Flagellar biosynthesis pathway, component FliQ
  Aae:  aq_1962
  Tma:  TM0697
  Cac:  CAC2149
  Lin:  lin0685
  Bsu:  BS_fliQ
  Bha:  BH2441
  Eco:  fliQ
  EcZ:  ZfliQ
  Ecs:  ECs2688
  Ype:  YPO0708 YPO1820a
  Sty:  STM1980
  Buc:  BU083
  Vch:  VC2122
  Pae:  PA1447
  Rso:  RSp0374
  Hpy:  HP1419
  jHp:  jhp1314
  Cje:  Cj1675
  Atu:  AGc1023
  Sme:  SMc03053
  Bme:  BMEII0165
  Mlo:  msr2943
  Ccr:  CC1075
  Tpa:  TP0717
  Bbu:  BB0274
_______

[R] COG1988 Predicted membrane-bound metal-dependent hydrolases
  Afu:  AF0412 AF1188
  Mac:  MA1572 MA1573 MA1576
  Mth:  MTH1252 MTH350
  Mja:  MJ0790
  Mka:  MK1171 MK1334
  Pho:  PH0213
  Pab:  PAB0131
  Ape:  APE1808
  Cac:  CAC0507 CAC1083
  Sau:  SA1686 SA1975
  Lin:  lin1798
  Bsu:  BS_yfhP BS_yvsG
  Bha:  BH0929 BH1033 BH2138
  Eco:  ybcI ydjM
  EcZ:  Z2757 ZybcI
  Ecs:  ECs0589 ECs2434
  Ype:  YPO1717 YPO3045
  Sty:  STM0540 STM1321
  Pae:  PA4962
  Pmu:  PM0419
_______

[NOU] COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
  Afu:  AF0936
  Hbs:  VNG2285C
  Mac:  MA0519 MA2598 MA3102 MA4505
  Mth:  MTH421
  Mja:  MJ0835.2 MJ0902 MJ1282.1
  Mka:  MK0703
  Pho:  PH0446 PH0779
  Pab:  PAB0846 PAB1309
  Aae:  aq_1601
  Tma:  TM1696
  Dra:  DR2065
  Cac:  CAC2784
  Cgl:  Cgl1586
  Mtu:  Rv2551c
  MtC:  MT2628
  Lla:  L0332
  Spy:  SPy1532
  Spn:  SP1808
  Sau:  SA1486
  Lin:  lin1585
  Bsu:  BS_comC
  Bha:  BH3035
  Syn:  slr1120
  Nos:  alr1315
  Eco:  hofD pppA
  EcZ:  ZhopD
  Ecs:  ECs4188
  Ype:  YPO0806
  Sty:  STM3442
  Vch:  VC0839 VC2426
  Pae:  PA4528
  Hin:  HI0296
  Pmu:  PM0087
  Xfa:  XF2537
  Nme:  NMB0332
  NmA:  NMA2156
  Rso:  RSc2827
  Cje:  Cj0825
  Mlo:  mll6828 mlr6488
  Ccr:  CC0184
_______

[S] COG1990 Uncharacterized conserved protein
  Afu:  AF2095
  Hbs:  VNG0240a
  Mac:  MA3269
  Mth:  MTH1697
  Mja:  MJ0051
  Mka:  MK1597
  Tac:  Ta0108
  Tvo:  TVN0187
  Pho:  PH1539
  Pab:  PAB0429
  Pya:  PAE0710
  Sso:  SSO0175
  Ape:  APE1661
  Sce:  YBL057c
  Spo:  SPAC19A8.14
  Ecu:  ECU04g0720
  Cgl:  Cgl2470
_______

[S] COG1991 Uncharacterized conserved protein
  Mth:  MTH422
  Mja:  MJ0431 MJ0832.1 MJ0835.1 MJ1400 MJ1469
  Mka:  MK0696
  Pho:  PH1338
  Pab:  PAB1822
_______

[S] COG1992 Uncharacterized conserved protein
  Hbs:  VNG0247C_2 VNG2606G_2
  Mac:  MA3197_2
  Mth:  MTH861
  Mja:  MJ0236_2
  Mka:  MK0589_2
  Pho:  PH0716_2 PH1155_2
  Pab:  PAB0877_2 PAB1646_2
  Pya:  PAE2210_2 PAE2535_2
  Sso:  SSO0039 SSO0468_2 SSO2393_2
  Ape:  APE2400_2
  Tma:  TM0790_2
_______

[S] COG1993 Uncharacterized conserved protein
  Mac:  MA0200 MA3935
  Mja:  MJ1524
  Mka:  MK1210
  Pho:  PH1503
  Pab:  PAB1926
  Aae:  aq_448 aq_450
  Tma:  TM0021
  Mtu:  Rv3071
  MtC:  MT3155
  Bme:  BMEII0468
  Ccr:  CC2725
_______

[R] COG1994 Zn-dependent proteases
  Afu:  AF0332_1
  Hbs:  VNG0875Cm VNG2168C_1
  Mac:  MA0007_1 MA0987
  Mth:  MTH816_1 MTH986
  Mja:  MJ0392_1 MJ0611
  Mka:  MK1053
  Tac:  Ta0562
  Tvo:  TVN0616
  Pab:  PAB1319
  Pya:  PAE1186
  Sso:  SSO0464
  Ape:  APE1967
  Aae:  aq_1853
  Tma:  TM0683
  Dra:  DR0982
  Cac:  CAC1253 CAC2628
  Mtu:  Rv0359 Rv2625c_1
  MtC:  MT0375 MT2700_1
  Lin:  lin2708
  Bsu:  BS_spoIVFB BS_ywhC
  Bha:  BH3015
  Syn:  sll0528_1
  Nos:  all1844_1 alr3900_1
  Vch:  VCA0550
  Nme:  NMB1731
  NmA:  NMA1986
  Rso:  RSc1142 RSc2524
  Hpy:  HP0575
  jHp:  jhp0522
  Sme:  SMa1126_1 SMb20925_1
  Mlo:  mll1338
  Ccr:  CC3381
_______

[H] COG1995 Pyridoxal phosphate biosynthesis protein
  Aae:  aq_852
  Fnu:  FN0226
  Bha:  BH0804
  Syn:  sll0660
  Nos:  alr4755
  Eco:  pdxA
  EcZ:  ZpdxA
  Ecs:  ECs0057
  Ype:  YPO0493
  Sty:  STM0091 STM0163
  Vch:  VC0444
  Pae:  PA0593 PA2212
  Pmu:  PM1650
  Xfa:  XF0839
  Nme:  NMB0195
  NmA:  NMA0072
  Rso:  RSc0517
  Hpy:  HP1583
  jHp:  jhp1490
  Cje:  Cj1239
  Atu:  AGc2043 AGpA104
  Sme:  SMb20146 SMb20772 SMc00580
  Bme:  BMEI1266
  Mlo:  mll7861
  Ccr:  CC1686
_______

[K] COG1996 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)
  Afu:  AF0056
  Hbs:  VNG0237H
  Mac:  MA4672
  Mth:  MTH680a
  Mja:  MJ0593a
  Mka:  MK0378
  Tac:  Ta1295a
  Tvo:  TVN0310
  Pho:  PHS056
  Pab:  PAB3072
  Pya:  PAE2258
  Sso:  SSO5865
  Ape:  APES057
  Sce:  YHR143w-a
  Spo:  SPBC19C2.03
  Cac:  CAC1913
_______

[J] COG1997 Ribosomal protein L37AE/L43A
  Afu:  AF0057
  Hbs:  VNG0239C
  Mac:  MA1775 MA4142
  Mth:  MTH681
  Mja:  MJ0593
  Mka:  MK0379
  Tac:  Ta1295
  Tvo:  TVN0309
  Pho:  PHS057
  Pab:  PAB7067
  Pya:  PAE2202
  Sso:  SSO6418
  Ape:  APES054
  Sce:  YJR094w-a YPR043w
  Spo:  SPBC800.04c SPBC83.02c
  Ecu:  ECU07g1005
_______

[J] COG1998 Ribosomal protein S27AE
  Afu:  AF1113
  Hbs:  VNG2047G
  Mac:  MA3696
  Mth:  MTH268
  Mja:  MJ0393
  Mka:  MK1455
  Tac:  Ta1093
  Tvo:  TVN0482
  Pho:  PH1910a
  Pab:  PAB3419a
  Pya:  PAE2432
  Sso:  SSO5844
  Ape:  APE1132a
  Sce:  YLR167w_2
  Spo:  SPAC589.10c_2 SPAC6G10.11c_2
_______

[R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
  Hbs:  VNG0152G
  Pya:  PAE1358 PAE2638
  Ape:  APE0796 APE1721
  Sce:  YBR024w YBR037c
  Spo:  SPBC119.06
  Aae:  aq_2189 aq_2194 aq_988
  Dra:  DR0597 DR1886
  Bsu:  BS_ypmQ
  Bha:  BH2904 BH3335
  Vch:  VCA0038
  Pae:  PA0114
  Xfa:  XF1366
  Nme:  NMB1578
  NmA:  NMA1767
  Rso:  RSc0373 RSc1503 RSc2292 RSp0988 RSp1501
  Cje:  Cj0911
  Atu:  AGc3756
  Sme:  SMc01471
  Bme:  BMEI0593
  Mlo:  mlr1532
  Ccr:  CC0249 CC3503
  Rpr:  RP031 RP587
  Rco:  RC0042 RC0895
_______

[R] COG2000 Predicted Fe-S protein
  Mth:  MTH1671
  Mja:  MJ0119
  Mka:  MK0811
  Tma:  TM1422
_______

[S] COG2001 Uncharacterized protein conserved in bacteria
  Dra:  DR1865
  Cac:  CAC2133
  Cgl:  Cgl2117
  Mtu:  Rv2166c
  MtC:  MT2224
  Mle:  ML0905
  Sau:  SA1021
  Lin:  lin2148
  Bsu:  BS_yllB
  Bha:  BH2576
  Eco:  yabB
  EcZ:  ZyabB
  Ecs:  ECs0085
  Ype:  YPO0546
  Sty:  STM0119
  Pae:  PA4421
  Hin:  HI1129
  Pmu:  PM0133
  Xfa:  XF0789
  Nme:  NMB0410
  NmA:  NMA2075
  Rso:  RSc2853
  Sme:  SMc01857
  Ccr:  CC2563
  Rpr:  RP570
  Rco:  RC0858
  Tpa:  TP0383
  Uur:  UU385
  Mpu:  MYPU_4940
  Mpn:  MPN314
  Mge:  MG221
_______

[K] COG2002 Regulators of stationary/sporulation gene expression
  Afu:  AF0066 AF0476 AF2011 AF2189 AF2359
  Hbs:  VNG6387H
  Pho:  PH1179 PHS018 PHS027
  Pab:  PAB1569 PAB3032 PAB3187
  Pya:  PAE0100 PAE0497 PAE2828
  Sso:  SSO11387 SSO11914 SSO12018 SSO8620 SSO9378
  Ape:  APE2617a
  Cac:  CAC0310 CAC1941 CAC3214 CAC3647 CAC3649 CAP0091
  Mtu:  Rv0599c Rv2595
  MtC:  MT0629
  Lin:  lin0211
  Bsu:  BS_abh BS_abrB BS_spoVT
  Bha:  BH0050 BH0070 BH3982
  Syn:  slr0724
  Nos:  asr3467
  Eco:  sohA
  EcZ:  ZsohA
  Ecs:  ECs4007
  Atu:  AGl3576
  Sme:  SMc01176 SMc02658
  Mlo:  msl3900 msl7485
_______

[L] COG2003 DNA repair proteins
  Mac:  MA1979
  Aae:  aq_1610
  Tma:  TM1557
  Fnu:  FN0909
  Cac:  CAC1241
  Lla:  L0306
  Spy:  SPy1118
  Spn:  SP1088
  Sau:  SA0053 SA1485
  Lin:  lin1584
  Bsu:  BS_ysxA
  Bha:  BH3032
  Syn:  sll0766
  Nos:  alr2351
  Eco:  radC yeeS yfjY ykfG
  EcZ:  Z1217 Z1657 ZradC
  Ecs:  ECs1403 ECs2803 ECs4513
  Ype:  YPO0049
  Sty:  STM3729
  Vch:  VC0217 VC0510 VC1786
  Pae:  PA5319
  Hin:  HI0952
  Pmu:  PM1152
  Xfa:  XF0148
  Nme:  NMB1038
  NmA:  NMA1448
  Rso:  RSc2444 RSc2620
  Atu:  AGc2959
  Sme:  SMc00299
  Bme:  BMEI0718
  Mlo:  mlr0956 msr1029
  Rco:  RC1277 RC1278
_______

[J] COG2004 Ribosomal protein S24E
  Afu:  AF1114
  Hbs:  VNG2048G
  Mac:  MA3695
  Mth:  MTH267
  Mja:  MJ0394
  Mka:  MK1454
  Tac:  Ta1092
  Tvo:  TVN0483
  Pho:  PH1909a
  Pab:  PAB3419
  Pya:  PAE2434
  Sso:  SSO0435
  Ape:  APE1132
  Sce:  YER074w YIL069c
  Spo:  SPAC17G6.06 SPBC17G9.07
  Ecu:  ECU10g1570i
_______

[R] COG2005 N-terminal domain of molybdenum-binding protein
  Afu:  AF1022
  Mac:  MA0283
  Mth:  MTH1470
  Mka:  MK1430
  Pya:  PAE0019_1 PAE0813
  Sso:  SSO1066
  Eco:  modE
  EcZ:  ZmodE
  Ecs:  ECs0789
  Ype:  YPO1143
  Sty:  STM0779
  Pae:  PA0487
  Hin:  HI1694
  Pmu:  PM0746
  Rso:  RSc2092_1 RSp1153
  Cje:  Cj1507c_2
  Atu:  AGc4647
  Sme:  SMc03199
  Mlo:  mll1462
  Ccr:  CC0327
_______

[S] COG2006 Uncharacterized conserved protein
  Afu:  AF1306 AF2235
  Mac:  MA0628_1 MA1031_1 MA1433
  Mth:  MTH772_1
  Tma:  TM0049_1
  Syn:  sll1697
  Nos:  alr3725
_______

[J] COG2007 Ribosomal protein S8E
  Afu:  AF2152
  Hbs:  VNG1668G
  Mac:  MA0923
  Mth:  MTH207
  Mja:  MJ0673
  Mka:  MK1545
  Tac:  Ta1040
  Tvo:  TVN0555
  Pho:  PH1103
  Pab:  PAB0749
  Pya:  PAE3331
  Sso:  SSO0164
  Ape:  APE0789
  Sce:  YBL072c YER102w YER126c
  Spo:  SPAC2C4.16c SPAC521.05 SPCP1E11.08
  Ecu:  ECU02g0880 ECU11g0810
_______

[E] COG2008 Threonine aldolase
  Hbs:  VNG2447G
  Sce:  YEL046c
  Spo:  SPAC23H3.09c
  Tma:  TM1744
  Fnu:  FN0810
  Dra:  DR1313
  Cac:  CAC3420
  Sau:  SA1154
  Lin:  lin0333
  Bha:  BH3283
  Nos:  alr3296
  Eco:  ybjU
  EcZ:  ZybjU
  Ecs:  ECs0956
  Ype:  YPO1357
  Sty:  STM0934
  Vch:  VCA0765
  Pae:  PA0902 PA5413
  Rso:  RSc0808 RSp1116
  Atu:  AGl2098
  Sme:  SMc04029
  Bme:  BMEII0041
  Mlo:  mlr3032 mlr6130
  Ccr:  CC3093
_______

[C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
  Afu:  AF0683
  Hbs:  VNG1310G
  Tac:  Ta1003
  Tvo:  TVN0745
  Pya:  PAE0718
  Ape:  APE0948
  Sce:  YKL141w YMR118c
  Spo:  SPCC330.12c
  Dra:  DR0954
  Mtu:  Rv3316
  MtC:  MT3417
  Mle:  ML0699
  Sau:  SA0994
  Bsu:  BS_sdhC
  Bha:  BH3093
  Eco:  sdhC
  EcZ:  ZsdhC
  Ecs:  ECs0746
  Ype:  YPO1109
  Sty:  STM0732
  Vch:  VC2091
  Pae:  PA1581
  Xfa:  XF1070
  Nme:  NMB0948
  NmA:  NMA1143
  Rso:  RSc1996
  Hpy:  HP0193
  jHp:  jhp0179
  Cje:  Cj0408
  Atu:  AGc4794
  Sme:  SMc02463
  Bme:  BMEI0159
  Mlo:  mll4266
  Ccr:  CC3529
  Rpr:  RP126
  Rco:  RC0168
  Ctr:  CT593 CT593.1
  Cpn:  CPn0788
_______

[C] COG2010 Cytochrome c, mono- and diheme variants
  Afu:  AF0190_2
  Mac:  MA0167
  Dra:  DR0343_2 DR0429_2 DR0434 DR2095_2 DRA0275
  Cgl:  Cgl2143
  Mtu:  Rv2194
  MtC:  MT2250
  Mle:  ML0881
  Bsu:  BS_cccA BS_cccB BS_qcrC_2
  Bha:  BH1378 BH1674_2 BH3603
  Syn:  sll1245 sll1796
  Nos:  all0161 all1365 alr4251 asl0256
  Vch:  VC1439
  Pae:  PA0105_2 PA0509_1 PA0517 PA0519_1 PA0523 PA1552 PA1555
        PA1600 PA1734 PA1983 PA2266 PA4571_1 PA4619 PA5248_1
  Nme:  NMB0717 NMB1723
  NmA:  NMA0925 NMA1977
  Rso:  RSc0362_2 RSc0772 RSc1279 RSc3154 RSp0989 RSp1503_2
  Hpy:  HP0147
  jHp:  jhp0135
  Cje:  Cj1487c
  Atu:  AGc1609 AGc2829 AGl954
  Sme:  SMa0118 SMa0617 SMa0769 SMa1099 SMa1104 SMa1113 SMa1170
        SMa1213 SMa1276 SMb20174 SMb20402 SMc00086 SMc04048
  Bme:  BMEI1566 BMEII0999
  Mlo:  mll6628 mll9632 mlr6414 mlr7639
  Ccr:  CC1090 CC1404 CC1696 CC2792 CC2970
_______

[P] COG2011 ABC-type metal ion transport system, permease component
  Fnu:  FN0659
  Dra:  DR1357
  Cac:  CAC0985
  Cgl:  Cgl0617
  Lla:  L122401
  Spy:  SPy0321
  Spn:  SP0152
  Sau:  SA0421 SA0770
  Lin:  lin0311 lin2513
  Bsu:  BS_yusB
  Bha:  BH3480
  Eco:  yaeE
  EcZ:  ZyaeE
  Ecs:  ECs0200
  Ype:  YPO1072 YPO1319
  Sty:  STM0246 STM0512
  Vch:  VC0906
  Pae:  PA2351 PA5504
  Hin:  HI0620a
  Pmu:  PM1729
  Xfa:  XF0874
  Nme:  NMB1947
  NmA:  NMA0505
  Rso:  RSc0921
  Hpy:  HP1577
  jHp:  jhp1485
  Cje:  Cj0773c
  Atu:  AGl763
  Sme:  SMc03158
  Bme:  BMEII0336
  Mlo:  mll4791
  Ccr:  CC2668
  Cpn:  CPn0279
  Tpa:  TP0119
_______

[K] COG2012 DNA-directed RNA polymerase, subunit H, RpoH/RPB5
  Afu:  AF1885
  Hbs:  VNG2668G
  Mac:  MA1266
  Mth:  MTH1048
  Mja:  MJ1039
  Mka:  MK0688
  Tac:  Ta0389
  Tvo:  TVN1183
  Pho:  PHS044
  Pab:  PAB7151
  Pya:  PAE0664
  Sso:  SSO5468
  Ape:  APES061
  Sce:  YBR154c
  Spo:  SPAC23C4.15
  Ecu:  ECU07g0960
_______

[S] COG2013 Uncharacterized conserved protein
  Afu:  AF0626
  Hbs:  VNG0533H VNG1609C VNG2631H
  Mac:  MA1825 MA2615 MA4652
  Mth:  MTH747
  Mka:  MK0909
  Tac:  Ta0740
  Tvo:  TVN1405
  Pab:  PAB2205
  Sso:  SSO1755
  Ape:  APE2139
  Tma:  TM0367
  Dra:  DR0368 DR0625 DR2216
  Cac:  CAC0556 CAC1537 CAC2738
  Lla:  L178908
  Spy:  SPy0238
  Syn:  slr1570 slr1571 slr1572
  Pae:  PA3696
  Mlo:  mlr0194
  Ccr:  CC1115
_______

[S] COG2014 Uncharacterized conserved protein
  Mac:  MA0321
  Mth:  MTH925
  Mja:  MJ0500
  Pho:  PH1506
  Pab:  PAB1928
_______

[Q] COG2015 Alkyl sulfatase and related hydrolases
  Sce:  YOL164w
  Mtu:  Rv3762c
  MtC:  MT3869
  Eco:  yjcS
  EcZ:  ZyjcS
  Ecs:  ECs5066
  Vch:  VC0783
  Pae:  PA0740
  Ccr:  CC1540
_______

[J] COG2016 Predicted RNA-binding protein (contains PUA domain)
  Afu:  AF1405
  Hbs:  VNG2646C
  Mac:  MA3883
  Mth:  MTH650
  Mja:  MJ1432
  Mka:  MK0219
  Tac:  Ta1423
  Tvo:  TVN1441
  Pho:  PH0734
  Pab:  PAB1506
  Pya:  PAE1626
  Sso:  SSO3240
  Ape:  APE0525
  Sce:  YER007c-a
  Spo:  SPBC31F10.12
  Ecu:  ECU05g1350
_______

[G] COG2017 Galactose mutarotase and related enzymes
  Tac:  Ta0674 Ta0911
  Tvo:  TVN0950
  Sso:  SSO2747
  Sce:  YBR019c_2 YHR210c YNR071c
  Spo:  SPBPB2B2.12c_2
  Tma:  TM0282
  Fnu:  FN1707
  Dra:  DR0747
  Cac:  CAC0697 CAC1349 CAC3032
  Lla:  L0029 L0232 L183012 L74167
  Spn:  SP0066
  Sau:  SA2129
  Lin:  lin1322 lin2619
  Bsu:  BS_yoxA
  Bha:  BH2755
  Syn:  slr1438
  Nos:  alr2709
  Eco:  galM yihR yphB
  EcZ:  ZgalM ZyihR ZyphB
  Ecs:  ECs0784 ECs3410 ECs4802
  Sty:  STM0773 STM4020
  Vch:  VC1594
  Hin:  HI0818
  Pmu:  PM1034
  Nme:  NMB0389
  NmA:  NMA2099
  Rso:  RSc1083 RSc1585 RSc2754
  Atu:  AGc4929 AGl1318 AGl1546
  Sme:  SMa0077 SMc03798
  Bme:  BMEI1109
  Mlo:  mll1167 mll7078 mll7370 mlr0411 mlr7196
  Ccr:  CC1418 CC3323
_______

[R] COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid
  Afu:  AF1500
  Mth:  MTH1836 MTH503 MTH595
  Mja:  MJ0310 MJ0714 MJ1340 MJ1389
  Mka:  MK0216 MK1325
  Aae:  aq_1847
  Dra:  DR0616 DR0995 DR1612 DR2180
  Mtu:  Rv3364c
  MtC:  MT3472
  Nme:  NMB0479
  NmA:  NMA2006
_______

[F] COG2019 Archaeal adenylate kinase
  Mth:  MTH1663 MTH27
  Mja:  MJ0479
  Mka:  MK0025
  Tac:  Ta1247
  Tvo:  TVN0349
  Pho:  PH1753
  Pab:  PAB2140
  Pya:  PAE1681
  Sso:  SSO0694
  Ape:  APE0981
  Bme:  BMEI1228
_______

[O] COG2020 Putative protein-S-isoprenylcysteine methyltransferase
  Afu:  AF2387
  Mac:  MA0734 MA1000 MA2249 MA2467 MA2698
  Pho:  PH1225
  Pab:  PAB0686
  Ape:  APE0798
  Sce:  YDR410c
  Spo:  SPAC10F6.12c
  Ecu:  ECU01g1350
  Cac:  CAC3412
  Mtu:  Rv1216c Rv2437 Rv3238c
  MtC:  MT1254 MT2512 MT3335
  Syn:  slr1182
  Nos:  all7590
  Vch:  VC1199
  Hin:  HI0149
  Pmu:  PM2013
  Rso:  RSc2022
  Sme:  SMc01203 SMc01259 SMc01704
  Bme:  BMEI2009 BMEII0990
  Mlo:  mll0909 mll1752 mll4353 mll4454 mll5060 mlr1316 mlr1600
        mlr2550 mlr6490
_______

[E] COG2021 Homoserine acetyltransferase
  Hbs:  VNG2420G
  Mac:  MA2714_1
  Mth:  MTH1820
  Sce:  YNL277w
  Spo:  SPBC106.17c SPBC56F2.11
  Dra:  DR0872
  Cgl:  Cgl0633 Cgl0816
  Mtu:  Rv3341
  MtC:  MT3444
  Mle:  ML0682
  Sau:  SA0011
  Lin:  lin0603
  Pae:  PA0390
  Hin:  HI1263
  Pmu:  PM0866
  Xfa:  XF0863 XF2465
  Nme:  NMB0940
  NmA:  NMA1136
  Rso:  RSc0027
  Mlo:  mlr3538
  Ccr:  CC0525 CC3204
_______

[H] COG2022 Uncharacterized enzyme of thiazole biosynthesis
  Aae:  aq_2178
  Fnu:  FN1754
  Dra:  DRA0172
  Cac:  CAC2922
  Cgl:  Cgl1993
  Mtu:  Rv0417
  MtC:  MT0430
  Mle:  ML0297
  Bsu:  BS_yjbT
  Bha:  BH1433
  Syn:  slr0633_2
  Nos:  all3519_2
  Eco:  thiG
  EcZ:  ZthiG
  Ecs:  ECs4914
  Ype:  YPO3742
  Sty:  STM4160
  Vch:  VC0065
  Pae:  PA0381
  Xfa:  XF0783
  Nme:  NMB2071
  NmA:  NMA0361
  Rso:  RSc0109
  Cje:  Cj1045c
  Atu:  AGc4650
  Sme:  SMb20617
  Bme:  BMEI1735
  Mlo:  mll5790
  Ccr:  CC1880
_______

[J] COG2023 RNase P subunit RPR2
  Afu:  AF0109
  Hbs:  VNG0599C
  Mac:  MA0290
  Mth:  MTH1618
  Mja:  MJ0962
  Mka:  MK1622
  Tac:  Ta0176m
  Tvo:  TVN0279
  Pho:  PH1601
  Pab:  PAB0385
  Sso:  SSO2225
  Ape:  APE1092
  Sce:  YIR015w
  Spo:  SPBC1105.16c
  Ecu:  ECU10g1695
_______

[J] COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type)
  Afu:  AF0110
  Mac:  MA0090
  Mth:  MTH1501
  Mja:  MJ1660
  Mka:  MK0439
_______

[C] COG2025 Electron transfer flavoprotein, alpha subunit
  Afu:  AF0287
  Hbs:  VNG2151G
  Tac:  Ta0212 Ta0329 Ta0429_2
  Tvo:  TVN1281 TVN1382
  Pya:  PAE0721 PAE3587
  Sso:  SSO2762 SSO2817_2
  Ape:  APE0135 APE2419
  Sce:  YPR004c
  Spo:  SPAC27D7.06
  Tma:  TM1531
  Fnu:  FN0785 FN1424_2 FN1533
  Dra:  DR0970
  Cac:  CAC2543_2 CAC2709
  Cgl:  Cgl1202
  Mtu:  Rv3028c
  MtC:  MT3112
  Mle:  ML1711
  Bsu:  BS_etfA
  Bha:  BH3099
  Eco:  fixB ydiR ygcQ
  EcZ:  Z4079 Z4080 ZfixB ZydiR
  Ecs:  ECs0045 ECs2405 ECs3624 ECs3625
  Sty:  STM0076 STM0856 STM1353
  Pae:  PA2951 PA5400
  Xfa:  XF0253
  Nme:  NMB2154
  NmA:  NMA0241
  Rso:  RSc0924 RSp0060
  Atu:  AGl2462
  Sme:  SMa0819 SMa1389 SMc00728
  Bme:  BMEI0097
  Mlo:  mll5861 mlr3488
  Ccr:  CC0726
_______

[JD] COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system
  Afu:  AF1075 AF1080 AF1093 AF2342
  Mac:  MA0049 MA0376 MA0981 MA1694 MA3500 MA4280
  Mja:  MJ0071 MJ0909 MJ1103 MJ1173
  Pho:  PHS013 PHS016
  Ape:  APE1558a
  Fnu:  FN0211 FN0497 FN1100
  Mtu:  Rv1246c Rv2866
  MtC:  MT1284
  Spn:  SP1223
  Syn:  slr0664
  Nos:  all4407 asl2100 asl4561 asr1400
  Eco:  relE
  Ype:  YPO0884
  Sty:  STM1550 STM4450
  Vch:  VCA0444 VCA0468 VCA0478
  Rso:  RSc3279
  Atu:  AGc1206
  Sme:  SMc04436
_______

[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
  Mac:  MA1969
  Dra:  DR0176
  Cgl:  Cgl2643
  Mtu:  Rv3627c
  MtC:  MT3729
  Mle:  ML0211
  Bsu:  BS_pbp
  Syn:  sll1369 slr0646 slr0804
  Nos:  alr0054 alr1666
  Eco:  dacB
  EcZ:  ZdacB
  Ecs:  ECs4061
  Ype:  YPO3506
  Sty:  STM3300
  Vch:  VC0632
  Pae:  PA3047
  Hin:  HI1330
  Pmu:  PM0716
  Xfa:  XF1614
  Nme:  NMB1797
  NmA:  NMA0665
  Rso:  RSc0584
_______

[S] COG2028 Uncharacterized conserved protein
  Afu:  AF2351
  Mja:  MJECS03
  Pho:  PH0907
  Pab:  PAB1779
_______

[S] COG2029 Uncharacterized conserved protein
  Mac:  MA4198
  Mth:  MTH1229
  Mja:  MJ0805
  Mka:  MK0131
  Pho:  PH0223
  Pab:  PAB0138
_______

[I] COG2030 Acyl dehydratase
  Afu:  AF0198 AF1124 AF1933 AF2313
  Hbs:  VNG0626G VNG1349Cm VNG2290G
  Sso:  SSO1154 SSO3136
  Sce:  YKL182w_3 YKR009c_2
  Spo:  SPAC926.09c_3
  Fnu:  FN0816
  Dra:  DR1239 DR2381_2 DRA0199
  Cgl:  Cgl0289 Cgl0813_3 Cgl2444_3
  Mtu:  Rv0130 Rv0216 Rv0241c Rv0636 Rv2499c Rv2524c_3 Rv3389c
        Rv3538
  MtC:  MT0138 MT0226 MT0255 MT0665 MT2574 MT2600_3 MT3496
        MT3642
  Mle:  ML1191_3 ML1909 ML2566 ML2627
  Sau:  SA0037
  Bsu:  BS_ydeM
  Eco:  maoC_2
  Ype:  YPO1927
  Sty:  STM3119
  Vch:  VCA0808
  Pae:  PA1018 PA3302 PA4015 PA4788
  Rso:  RSc0535 RSc2042 RSc2043 RSp1120
  Atu:  AGc4066 AGc4068 AGl1567
  Sme:  SMa0874 SMb20978 SMb21110 SMb21635_2 SMc02696 SMc02697 SMc03927
  Bme:  BMEI0477 BMEI0478 BMEII0328
  Mlo:  mll1143 mll6685 mll7145 mll7159 mlr0905 mlr2698 mlr2699
        mlr3097 msl6009m
  Ccr:  CC0704 CC0942 CC3498 CC3656
_______

[I] COG2031 Short chain fatty acids transporter
  Afu:  AF1538
  Ape:  APE2381m
  Fnu:  FN1858
  Cgl:  Cgl1142_2 Cgl1143
  Spy:  SPy0137
  Bha:  BH0358
  Eco:  atoE
  Pae:  PA2002
  Hin:  HI0772
  Hpy:  HP0693
  jHp:  jhp0635
_______

[P] COG2032 Cu/Zn superoxide dismutase
  Mac:  MA2422
  Sce:  YJR104c
  Spo:  SPAC821.10c
  Aae:  aq_1050 aq_238
  Dra:  DR1546 DRA0202_1
  Cac:  CAC1363
  Mtu:  Rv0432
  MtC:  MT0447
  Mle:  ML1925
  Bsu:  BS_yojM
  Eco:  sodC
  EcZ:  Z2347 Z3312 ZsodC
  Ecs:  ECs1120 ECs1989 ECs2355
  Ype:  YPO3375
  Sty:  STM0924 STM1044 STM1440
  Vch:  VC1583
  Pmu:  PM1952
  Nme:  NMB1398
  NmA:  NMA1617
  Rso:  RSc2368
  Sme:  SMc02597
  Bme:  BMEII0581
  Ccr:  CC1579
_______

[C] COG2033 Desulfoferrodoxin
  Afu:  AF0344 AF0833
  Mac:  MA3737
  Mth:  MTH757
  Mja:  MJ0741
  Pho:  PH1083
  Pab:  PAB0599
  Tma:  TM0658
  Cac:  CAC2450
  Tpa:  TP0823
_______

[S] COG2034 Predicted membrane protein
  Afu:  AF2279 AF2280
  Mac:  MA4120
  Mth:  MTH600
  Mja:  MJ1617
  Mka:  MK1007
  Tac:  Ta1487
  Tvo:  TVN0080
  Pho:  PHS029
  Pab:  PAB7309
  Sso:  SSO5909
  Ape:  APES007
_______

[S] COG2035 Predicted membrane protein
  Hbs:  VNG1069C
  Mth:  MTH465
  Tma:  TM0164
  Fnu:  FN0490
  Cgl:  Cgl1302
  Spy:  SPy2169
  Spn:  SP0986
  Sau:  SA0773
  Bha:  BH2069
  Vch:  VCA0040
  Tpa:  TP0312
  Bbu:  BB0759
_______

[B] COG2036 Histones H3 and H4
  Afu:  AF0337 AF1493
  Hbs:  VNG0134G
  Mac:  MA0672
  Mth:  MTH1696 MTH254 MTH821
  Mja:  MJ0168 MJ0932 MJ1258 MJ1647 MJECL29
  Mka:  MK0506 MK0743 MK1677
  Pho:  PHS046 PHS051
  Pab:  PAB3089 PAB3117
  Sce:  YBL021c YBR009c YBR010w YKL049c YNL030w YNL031c
  Spo:  SPAC1834.03c SPAC1834.04 SPAC23C11.08 SPBC1105.11c SPBC1105.12 SPBC1105.17 SPBC800.13_2
        SPBC8D2.03c SPBC8D2.04 SPBPI060 SPBPI061
  Ecu:  ECU03g1460 ECU09g0440 ECU09g0450 ECU10g0260
_______

[C] COG2037 Formylmethanofuran:tetrahydromethanopterin formyltransferase
  Afu:  AF2073 AF2207
  Mac:  MA0010
  Mth:  MTH1259 MTH403
  Mja:  MJ0318
  Mka:  MK0116 MK0816
_______

[H] COG2038 NaMN:DMB phosphoribosyltransferase
  Afu:  AF0276
  Hbs:  VNG1572C
  Mac:  MA3887
  Mth:  MTH1426
  Mja:  MJ1598
  Mka:  MK0224
  Tac:  Ta0078
  Tvo:  TVN0152
  Pho:  PH0034
  Pab:  PAB2326
  Pya:  PAE0372
  Sso:  SSO2213
  Ape:  APE2029
  Fnu:  FN0910
  Dra:  DRA0240
  Cac:  CAC1372
  Cgl:  Cgl2152
  Mtu:  Rv2207
  MtC:  MT2263
  Mle:  ML0868
  Bha:  BH0284
  Syn:  sll1500
  Nos:  alr0297
  Eco:  cobT
  EcZ:  ZcobT
  Ecs:  ECs2786
  Sty:  STM2016
  Vch:  VC1237
  Pae:  PA1279
  Rso:  RSc2397
  Atu:  AGc3467
  Sme:  SMc04214
  Bme:  BMEI1099
  Mlo:  mll0563 mlr1389
  Ccr:  CC1309
_______

[O] COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)
  Pho:  PH0596
  Pab:  PAB1419
  Sso:  SSO1465 SSO1607
  Fnu:  FN1728
  Dra:  DR0490
  Mtu:  Rv0319
  MtC:  MT0334
  Spy:  SPy0506
  Spn:  SP0860 SP2060
  Sau:  SA2482
  Bsu:  BS_pcp
  Bha:  BH3631
  Ype:  YPO2703
  Rso:  RSc2165 RSp0259
_______

[E] COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)
  Sce:  YLL062c YMR321c YPL273w
  Spo:  SPAC57A7.07c
  Cac:  CAC3348
  Mtu:  Rv2458
  MtC:  MT2533
  Mle:  ML1478
  Bsu:  BS_ybgG
  Syn:  slr1189
  Eco:  yagD
  Atu:  AGc4290
  Mlo:  mlr1281
_______

[R] COG2041 Sulfite oxidase and related enzymes
  Afu:  AF0171
  Hbs:  VNG1084G
  Mac:  MA3039
  Tac:  Ta0136
  Tvo:  TVN0215
  Pya:  PAE0389
  Sso:  SSO2826 SSO3201
  Ape:  APE0071
  Aae:  aq_979
  Dra:  DR0716 DR2536 DRA0225
  Cgl:  Cgl2886_1
  Mtu:  Rv0218
  MtC:  MT0228 MT1801
  Bsu:  BS_yuiH
  Nos:  all3673 alr2944
  Eco:  yedY
  EcZ:  Z3063
  Ecs:  ECs2709
  Ype:  YPO3662
  Sty:  STM3377
  Pae:  PA4692 PA4882
  Pmu:  PM0537
  Rso:  RSc0620 RSc0813 RSc2981
  Cje:  Cj0005c Cj0379c
  Atu:  AGc3511
  Sme:  SMa2103 SMb20584 SMc01281 SMc04049
  Bme:  BMEII0075 BMEII0305
  Mlo:  mll2597 mlr0879
  Ccr:  CC2748
_______

[S] COG2042 Uncharacterized conserved protein
  Hbs:  VNG2075C
  Mac:  MA2508
  Mth:  MTH554
  Mja:  MJ0708
  Mka:  MK0638
  Tac:  Ta0023m
  Tvo:  TVN0076
  Sso:  SSO0551
  Sce:  YOR006c
  Spo:  SPAC1F3.04c
  Ecu:  ECU09g1520
_______

[S] COG2043 Uncharacterized protein conserved in archaea
  Afu:  AF0180 AF0908 AF1313 AF2126
  Mac:  MA0089 MA0921 MA1972 MA4240
  Mth:  MTH1364 MTH1418 MTH469 MTH526
  Mja:  MJ0308
  Mka:  MK0575
_______

[R] COG2044 Predicted peroxiredoxins
  Afu:  AF0187 AF0563
  Mth:  MTH1417_2
  Mja:  MJ0760_2
  Mka:  MK0357_2
  Pya:  PAE0879 PAE2568
  Sso:  SSO0359 SSO1125 SSO3084
  Aae:  aq_390 aq_401
  Pae:  PA4795
_______

[HR] COG2045 Phosphosulfolactate phosphohydrolase and related enzymes
  Mth:  MTH1182
  Mja:  MJ1140
  Mka:  MK0138
  Tac:  Ta1432
  Tvo:  TVN0096
  Tma:  TM0797
  Dra:  DR1400
  Cac:  CAC3233
  Bsu:  BS_yitC
  Syn:  slr1718
  Nos:  all2568
  Rso:  RSc1273
_______

[P] COG2046 ATP sulfurylase (sulfate adenylyltransferase)
  Afu:  AF1667
  Pab:  PAB1595
  Pya:  PAE2609
  Sso:  SSO2912
  Ape:  APE1197
  Sce:  YJR010w
  Spo:  SPBC27.08c
  Aae:  aq_1081_1
  Dra:  DRA0016
  Bsu:  BS_yitA BS_ylnB
  Bha:  BH1487 BH3386
  Syn:  slr1165
  Nos:  all5138
  Cje:  Cj1609
_______

[R] COG2047 Uncharacterized protein (ATP-grasp superfamily)
  Afu:  AF0525
  Hbs:  VNG0546C
  Mac:  MA0642
  Mth:  MTH1306
  Mja:  MJ1210
  Mka:  MK0421
  Tac:  Ta1201
  Tvo:  TVN0410
  Pho:  PH0958
  Pab:  PAB0569
_______

[C] COG2048 Heterodisulfide reductase, subunit B
  Afu:  AF0271_2 AF1375
  Mac:  MA3126 MA4237
  Mth:  MTH1879
  Mja:  MJ0743 MJ0863
  Mka:  MK0572
  Sso:  SSO1129 SSO1135 SSO2358
  Aae:  aq_392 aq_394 aq_400
  Syn:  slr0201
  Nos:  all3341
  Cje:  Cj0439
_______

[E] COG2049 Allophanate hydrolase subunit 1
  Pho:  PH0987
  Pab:  PAB1713
  Sce:  YBR208c_4
  Fnu:  FN0437
  Dra:  DRA0285
  Cgl:  Cgl0976
  Mtu:  Rv0264c
  MtC:  MT0277
  Mle:  ML2549
  Sau:  SA0672 SA1437
  Bsu:  BS_ycsJ_1
  Bha:  BH1817
  Eco:  ybgJ
  EcZ:  ZybgJ
  Ecs:  ECs0736
  Sty:  STM0712
  Vch:  VCA0777
  Pae:  PA0495 PA2111 PA4510
  Hin:  HI1731
  Nme:  NMB0230
  NmA:  NMA0028
  Rso:  RSc2171 RSp0939
  Cje:  Cj1542
  Atu:  AGl1175 AGl1866_1
  Ccr:  CC1829_3
_______

[Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism
  Afu:  AF0926 AF2264
  Hbs:  VNG1336C
  Mac:  MA0735
  Tac:  Ta0293
  Tvo:  TVN1308
  Pho:  PH1136
  Pab:  PAB1655
  Pya:  PAE1329
  Sso:  SSO1253 SSO2140 SSO2622 SSO2861
  Spo:  SPBC31F10.02
  Aae:  aq_2114_1
  Dra:  DR0847 DR2321 DR2406 DRA0017 DRA0198
  Cgl:  Cgl1418
  Mtu:  Rv1532c Rv1847
  MtC:  MT1583 MT1895
  Lla:  L131392
  Spy:  SPy1344
  Spn:  SP1851
  Sau:  SA0805 SA1071
  Lin:  lin1924 lin2484
  Bsu:  BS_ylpC BS_yuxO
  Bha:  BH0206 BH2494 BH2602
  Eco:  paaI ybdB ydiI yigI
  EcZ:  Z2714 ZybdB ZyigI
  Ecs:  ECs0636 ECs2393 ECs4750
  Ype:  YPO2406 YPO3835
  Sty:  STM0599 STM1366 STM3956
  Vch:  VCA0580
  Pae:  PA0474 PA0957 PA1593 PA1594 PA1618 PA3971 PA4093
        PA4830 PA5202 PA5246
  Hin:  HI1161
  Pmu:  PM0788
  Rso:  RSc1764 RSc2019 RSc2874 RSc3389
  Hpy:  HP0420
  jHp:  jhp0964
  Cje:  Cj0977
  Atu:  AGc483
  Sme:  SMa1890_1 SMc00396 SMc01805
  Bme:  BMEI0304 BMEI1167 BMEII0889
  Mlo:  mll8460 mlr6946
  Ccr:  CC1663 CC2087 CC2103 CC3309 CC3564 CC3645 CC3646
_______

[J] COG2051 Ribosomal protein S27E
  Afu:  AF1334
  Hbs:  VNG0550G
  Mac:  MA0645
  Mth:  MTH1309
  Mja:  MJ0250
  Mka:  MK0418
  Tac:  Ta1204
  Tvo:  TVN0413
  Pho:  PH1939a
  Pab:  PAB7435
  Pya:  PAE3033
  Sso:  SSO7114
  Ape:  APES015
  Sce:  YHR021c YKL156w
  Spo:  SPBC1685.10
  Ecu:  ECU04g1015
_______

[S] COG2052 Uncharacterized protein conserved in bacteria
  Tma:  TM1690
  Cac:  CAC1717
  Bsu:  BS_yloBa
  Bha:  BH2513
  Syn:  ssl2874
  Nos:  asr0105
_______

[J] COG2053 Ribosomal protein S28E/S33
  Afu:  AF0765
  Hbs:  VNG1158G
  Mac:  MA1522
  Mth:  MTH256
  Mja:  MJ1202
  Mka:  MK1445
  Tac:  Ta1115
  Tvo:  TVN0450
  Pho:  PHS040
  Pab:  PAB7165
  Pya:  PAE3344
  Sso:  SSO5479
  Ape:  APES071
  Sce:  YLR264w YOR167c
  Spo:  SPAC25G10.06 SPCC285.15c
  Ecu:  ECU09g1275
_______

[R] COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases
  Afu:  AF0572
  Mac:  MA1473
  Mth:  MTH1698
  Mja:  MJ0458
  Mka:  MK1498
_______

[C] COG2055 Malate/L-lactate dehydrogenases
  Mth:  MTH1205
  Mja:  MJ1425
  Mka:  MK0392
  Pho:  PH1277
  Pab:  PAB1791
  Cac:  CAC0566
  Cgl:  Cgl0641
  Bsu:  BS_yjmC
  Eco:  ybiC yiaK ylbC
  EcZ:  ZybiC ZylbC
  Ecs:  ECs0579 ECs0879
  Sty:  STM0528 STM3081 STM3668
  Pae:  PA1252
  Hin:  HI1031
  Pmu:  PM1256
  Atu:  AGc268 AGl3209 AGl410
  Sme:  SMa0265 SMa1459 SMb20261 SMc02035
  Bme:  BMEII1005
  Mlo:  mll5197 mlr9117 mlr9216
_______

[R] COG2056 Predicted permease
  Fnu:  FN0341 FN1403
  Sau:  SA0804
  Bsu:  BS_yuiF
  Bha:  BH1986 BH3359
  Vch:  VC1005
  Pae:  PA2653
  Hin:  HI0325
  Pmu:  PM0989
  Nme:  NMB2064
  NmA:  NMA0370
  Hpy:  HP0758
  jHp:  jhp0695
  Cje:  Cj0006
_______

[I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
  Sso:  SSO1085
  Fnu:  FN0203 FN0273 FN1856
  Dra:  DRA0054_2 DRA0067
  Cac:  CAP0164
  Cgl:  Cgl2338
  Mtu:  Rv2503c Rv3552
  MtC:  MT2578 MT3656
  Spy:  SPy0142 SPy1639
  Bsu:  BS_yodR BS_yxjE
  Bha:  BH2258
  Eco:  atoA
  Pae:  PA0227 PA2000
  Hin:  HI0773
  Rso:  RSc1571 RSc2253
  Hpy:  HP0692
  jHp:  jhp0636
  Atu:  AGl642
  Sme:  SMb20588
  Bme:  BMEII0645
  Mlo:  mll4181
  Ccr:  CC0207 CC2406
  Rco:  RC0906
_______

[J] COG2058 Ribosomal protein L12E/L44/L45/RPP1/RPP2
  Afu:  AF1492
  Hbs:  VNG1103G
  Mac:  MA4277
  Mth:  MTH1682
  Mja:  MJ0508
  Mka:  MK0004
  Tac:  Ta0358
  Tvo:  TVN0420
  Pho:  PH1998
  Pab:  PAB1168
  Pya:  PAE1712
  Sso:  SSO0342
  Ape:  APE2170
  Sce:  YDL081c YDL130w YDR382w YOL039w
  Spo:  SPAC1071.08 SPAC644.15 SPBC23G7.15c SPBC3B9.13c SPBP8B7.06 SPCP1E11.09c
  Ecu:  ECU07g0110
_______

[P] COG2059 Chromate transport protein ChrA
  Mja:  MJ0718
  Tma:  TM1818 TM1819
  Fnu:  FN0712 FN0713
  Dra:  DR2413
  Cgl:  Cgl2395
  Bsu:  BS_ywrA BS_ywrB
  Bha:  BH0574 BH0869 BH0870
  Syn:  slr1457
  Nos:  all1110
  Vch:  VC2339
  Pae:  PA4289
  Rso:  RSc0979 RSc0980 RSp0555
  Atu:  AGl3461
  Sme:  SMc00808
  Mlo:  mlr5407
  Ccr:  CC1097
  Bbu:  BB0451 BB0452
  Mpu:  MYPU_7270 MYPU_7280
_______

[P] COG2060 K+-transporting ATPase, A chain
  Hbs:  VNG6176G
  Tac:  Ta1310
  Tvo:  TVN0499
  Dra:  DRB0086
  Cac:  CAC3682
  Mtu:  Rv1029
  MtC:  MT1058
  Sau:  SA0068 SA0069 SA1881
  Lin:  lin2830 pli0052
  Syn:  slr1728
  Nos:  all3154 all4246
  Eco:  kdpA
  EcZ:  ZkdpA
  Ecs:  ECs0726
  Ype:  YPO2692
  Sty:  STM0706
  Pae:  PA1633
  Rso:  RSc3382
  Atu:  AGl2088
  Sme:  SMa2333
  Mlo:  mll3133
  Ccr:  CC1591
_______

[E] COG2061 ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase
  Afu:  AF0934
  Mac:  MA2573
  Mth:  MTH416
  Mja:  MJ1601
  Mka:  MK1553
_______

[T] COG2062 Phosphohistidine phosphatase SixA
  Afu:  AF1002
  Pya:  PAE0518
  Sso:  SSO1195
  Ape:  APE2484
  Aae:  aq_1173
  Cgl:  Cgl0109
  Mtu:  Rv1276c
  MtC:  MT1313
  Mle:  ML1117
  Syn:  sll0400
  Nos:  alr0221
  Eco:  sixA
  EcZ:  Z3603
  Ecs:  ECs3223
  Ype:  YPO2748
  Sty:  STM2387
  Vch:  VC2070
  Pae:  PA1616
  Hin:  HI1338 HI1462.2
  Pmu:  PM0441
  Xfa:  XF1085
  Rso:  RSc1539
  Cje:  Cj1002c
  Atu:  AGc2511
  Sme:  SMc00468 SMc03822
  Bme:  BMEI0950
  Mlo:  mll7959 mlr0774
  Ccr:  CC0526
_______

[N] COG2063 Flagellar basal body L-ring protein
  Aae:  aq_1714
  Tma:  TM1540
  Eco:  flgH
  EcZ:  ZflgH
  Ecs:  ECs1457
  Ype:  YPO0729 YPO1805
  Sty:  STM1180
  Buc:  BU343
  Vch:  VC2194
  Pae:  PA1083
  Rso:  RSp0348
  Hpy:  HP0325
  jHp:  jhp0308
  Cje:  Cj0687c
  Atu:  AGc967
  Sme:  SMc03034
  Bme:  BMEII1082
  Mlo:  mlr2921
  Ccr:  CC2066
_______

[NU] COG2064 Flp pilus assembly protein TadC
  Afu:  AF0658 AF0995
  Hbs:  VNG0822C
  Mac:  MA0233 MA3097 MA3098 MA3976
  Mth:  MTH1703 MTH980
  Mja:  MJ0779 MJ0780 MJ1286
  Mka:  MK0705 MK0706
  Tac:  Ta0902 Ta0903
  Tvo:  TVN1013 TVN1014
  Pho:  PH0653 PH0654
  Pab:  PAB1458 PAB1459
  Pya:  PAE0772 PAE2779
  Sso:  SSO0119 SSO2386 SSO2679
  Ape:  APE2206 APE2207
  Cac:  CAC1978
  Cgl:  Cgl0303
  Mtu:  Rv3657c
  Ype:  YPO0688
  Pae:  PA4300
  Pmu:  PM0847
  Rso:  RSc0650 RSp1083
  Atu:  AGc371
  Sme:  SMa1562 SMc02822
  Mlo:  mll0893 mlr5604 mlr6486
  Ccr:  CC2940
_______

[F] COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
  Fnu:  FN0418
  Dra:  DR1110
  Cac:  CAC2113
  Cgl:  Cgl1575
  Mtu:  Rv1379
  MtC:  MT1423
  Lla:  L0227
  Spy:  SPy0830
  Spn:  SP1278
  Sau:  SA1041
  Lin:  lin1954
  Bsu:  BS_pyrR
  Bha:  BH2541
  Syn:  sll0368
  Nos:  alr2083
  Pae:  PA0403
  Hin:  HI0459
  Pmu:  PM1207
  Rso:  RSc0677
_______

[E] COG2066 Glutaminase
  Fnu:  FN1397
  Cgl:  Cgl2430
  Bsu:  BS_ybgJ BS_ylaM
  Bha:  BH2627 BH2717
  Syn:  slr2079
  Nos:  all2934 all4774
  Eco:  ybaS yneH
  EcZ:  ZybaS ZyneH
  Ecs:  ECs0538 ECs2131
  Ype:  YPO0949 YPO1939
  Sty:  STM1525
  Vch:  VC0454
  Pae:  PA1638
  Rso:  RSp1143
  Atu:  AGc3412
  Sme:  SMc00486
  Bme:  BMEII0907 BMEII0908
  Mlo:  mlr0211
  Ccr:  CC0276
_______

[I] COG2067 Long-chain fatty acid transport protein
  Aae:  aq_627 aq_985
  Fnu:  FN1003
  Eco:  fadL
  EcZ:  ZfadL
  Ecs:  ECs3227
  Ype:  YPO2744
  Sty:  STM2391
  Vch:  VC1042 VC1043 VCA0862
  Pae:  PA1288 PA1764 PA4589
  Hin:  HI0401
  Pmu:  PM1069
  Xfa:  XF1053
  Nme:  NMB0088
  NmA:  NMA0178
  Hpy:  HP0839
  jHp:  jhp0777
  Atu:  AGc3154
  Sme:  SMc02079
  Bme:  BMEI1025
  Mlo:  mll1103
  Ccr:  CC2094
_______

[R] COG2068 Uncharacterized MobA-related protein
  Mth:  MTH528
  Mka:  MK1200
  Pya:  PAE1934
  Sso:  SSO2432
  Ape:  APE2223
  Dra:  DRA0004
  Mtu:  Rv0345 Rv0371c
  MtC:  MT0360 MT0386
  Bsu:  BS_yurE
  Bha:  BH0751
  Eco:  ygfJ
  EcZ:  ZygfJ
  Ecs:  ECs3750
  Rso:  RSp0327
  Atu:  AGpA742
  Sme:  SMc00519_2
  Mlo:  mlr0093_2
  Ccr:  CC0019
_______

[C] COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)
  Afu:  AF0377
  Mac:  MA1012 MA3864
  Mth:  MTH1712
  Mja:  MJ0113
  Mka:  MK0722
_______

[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase
  Afu:  AF2173
  Sce:  YJR149w
  Aae:  aq_159
  Tma:  TM0800
  Fnu:  FN0174 FN0664
  Dra:  DR2545
  Cac:  CAC3576 CAC3580
  Cgl:  Cgl0912
  Mtu:  Rv0021c Rv1533 Rv1894c Rv2781c Rv3553
  MtC:  MT0024 MT1944 MT2851 MT3657
  Lla:  L28502
  Spy:  SPy1751
  Spn:  SP0419
  Sau:  SA0781
  Lin:  lin0810 lin2273
  Bsu:  BS_pksE_2 BS_yrpB
  Bha:  BH0210 BH1205 BH2639
  Nos:  all1642 all3741 alr5356
  Pae:  PA0660 PA1024 PA4202
  Xfa:  XF0121
  Nme:  NMB1452
  NmA:  NMA1666
  Rso:  RSc0114 RSc0255 RSp0307 RSp0316
  Hpy:  HP0773
  jHp:  jhp0710
  Cje:  Cj1270c
  Atu:  AGc729
  Sme:  SMc02150
  Bme:  BMEII0460
  Ccr:  CC1570 CC2372 CC2990 CC3379
_______

[R] COG2071 Predicted glutamine amidotransferases
  Spo:  SPBPB2B2.05
  Fnu:  FN0218 FN0505
  Cac:  CAC1764
  Mtu:  Rv2859c
  MtC:  MT2927
  Mle:  ML1573
  Lla:  L120396
  Spy:  SPy1119
  Spn:  SP1089 SP2072
  Lin:  lin1909
  Eco:  ycjL
  EcZ:  ZycjL
  Ecs:  ECs1875
  Pae:  PA0297
  Cje:  Cj1417c
  Atu:  AGl2905
  Sme:  SMc03943
  Bme:  BMEII0314
  Mlo:  mll5165 mll8760
  Ccr:  CC3133
  Rpr:  RP404 RP713
  Rco:  RC0552
_______

[P] COG2072 Predicted flavoprotein involved in K+ transport
  Sce:  YHR176w
  Spo:  SPBP16F5.08c
  Dra:  DRB0033_2
  Cgl:  Cgl1117 Cgl2725 Cgl2825
  Mtu:  Rv0565c Rv0892 Rv0943c Rv1393c Rv3049c Rv3083 Rv3741c
        Rv3742c Rv3854c
  MtC:  MT0591 MT0916 MT0969 MT1438 MT3134 MT3168 MT3849
        MT3850 MT3969
  Mle:  ML0065
  Bsu:  BS_trkA
  Bha:  BH3677
  Syn:  slr0801
  Pae:  PA1208 PA1538 PA2097 PA5393
  Rso:  RSc1881
  Atu:  AGl284 AGpA621 AGpT150
  Sme:  SMb20103 SMb20280 SMc04149
  Mlo:  mll1182 mll7934 mlr1435 mlr4448 mlr4561 mlr7328
  Ccr:  CC0774 CC1348 CC1799 CC1818 CC2569
_______

[H] COG2073 Cobalamin biosynthesis protein CbiG
  Afu:  AF0725
  Hbs:  VNG1554G
  Mth:  MTH1408
  Mja:  MJ1144
  Mka:  MK1518
  Tac:  Ta0660_1
  Tvo:  TVN0916_1
  Pya:  PAE0339
  Sso:  SSO0129 SSO2297
  Fnu:  FN0952
  Cac:  CAC1370
  Lin:  lin1161
  Syn:  slr0969_1
  Nos:  all0453_1 all2747
  Sty:  STM2028
  Pae:  PA2903_1 PA2947
  Rso:  RSp0619
  Atu:  AGc5076
  Sme:  SMc04285
  Bme:  BMEI0700 BMEI0712_1
  Mlo:  mlr1384
_______

[G] COG2074 2-phosphoglycerate kinase
  Mth:  MTH1835_1 MTH1883
  Mja:  MJ1482
  Mka:  MK0868 MK0033_1
  Tac:  Ta0762
  Tvo:  TVN0852
  Pho:  PH0149
  Pab:  PAB2253
  Dra:  DR1514
_______

[J] COG2075 Ribosomal protein L24E
  Afu:  AF0766
  Hbs:  VNG1159G
  Mac:  MA1523
  Mth:  MTH257
  Mja:  MJ1201
  Mka:  MK1444
  Tac:  Ta1114
  Tvo:  TVN0451
  Pho:  PH1495a
  Pab:  PAB8165
  Pya:  PAE3345
  Sso:  SSO5478
  Ape:  APES070
  Sce:  YGL031c YGR148c YLR009w
  Spo:  SPAC22E12.13c SPAC6G9.09c SPCC330.14c
  Ecu:  ECU02g0810 ECU07g0930
_______

[P] COG2076 Membrane transporters of cations and cationic drugs
  Hbs:  VNG1886a
  Mac:  MA1348
  Dra:  DR1004 DR1005
  Cac:  CAC3666
  Mtu:  Rv3065
  MtC:  MT3150.1
  Mle:  ML1756
  Lla:  L124677
  Lin:  lin0846 lin0847
  Bsu:  BS_ebrA BS_ebrB BS_ykkC BS_ykkD BS_yvaE BS_yvdR BS_yvdS
  Bha:  BH0685 BH0686 BH0840 BH0841
  Nos:  all0285
  Eco:  emrE sugE ydgE ydgF
  EcZ:  Z1870 Z2593 Z2594 ZsugE
  Ecs:  ECs1614 ECs2305 ECs2306 ECs5129
  Ype:  YPO0355 YPO2068 YPO2069 YPO2333
  Sty:  STM1482 STM1483 STM1653 STM4338
  Vch:  VC1393
  Pae:  PA0786 PA1540 PA1541 PA1882 PA3265 PA4990
  Nme:  NMB0393
  NmA:  NMA2091
  Cje:  Cj0309c Cj0310c Cj1173 Cj1174
  Atu:  AGc4218
  Sme:  SMc01178 SMc01179 SMc01278 SMc01523
  Bme:  BMEI1045
  Mlo:  mll9408 mlr4864
  Ccr:  CC3443
_______

[O] COG2077 Peroxiredoxin
  Aae:  aq_488
  Cac:  CAC3306
  Cgl:  Cgl1062
  Mtu:  Rv1932
  MtC:  MT1982
  Lla:  L101699
  Spn:  SP1651
  Sau:  SA1535
  Lin:  lin1625
  Bsu:  BS_ytgI
  Bha:  BH3194
  Eco:  tpx
  EcZ:  Ztpx
  Ecs:  ECs1903
  Ype:  YPO2342
  Sty:  STM1667 STM1682
  Vch:  VC0824
  Pae:  PA2532
  Hin:  HI0751
  Pmu:  PM0820
  Rso:  RSc2790
  Hpy:  HP0390
  jHp:  jhp0991
  Cje:  Cj0779
  Mpu:  MYPU_7080
_______

[S] COG2078 Uncharacterized conserved protein
  Afu:  AF1969
  Hbs:  VNG2543C
  Mac:  MA3591
  Mth:  MTH857
  Mja:  MJ0810
  Mka:  MK0488
  Tac:  Ta0236m
  Tvo:  TVN1359
  Pho:  PH0010
  Pab:  PAB0006
  Pya:  PAE0745 PAE0830
  Sso:  SSO0193
  Ape:  APE1056
  Sce:  YOR289w
  Spo:  SPAC688.03c
  Aae:  aq_1444
  Tma:  TM1551
  Cac:  CAC1420_2
_______

[R] COG2079 Uncharacterized protein involved in propionate catabolism
  Mth:  MTH965
  Tac:  Ta1226
  Tvo:  TVN0369
  Pya:  PAE1717
  Sso:  SSO2586
  Ape:  APE2147
  Sce:  YPR002w
  Cgl:  Cgl0636 Cgl0637 Cgl0674 Cgl2486
  Mtu:  Rv1130
  MtC:  MT1162
  Bsu:  BS_mmgE BS_yxeQ
  Bha:  BH3923
  Eco:  prpD
  EcZ:  ZprpD
  Ecs:  ECs0387
  Sty:  STM0370
  Pae:  PA0792 PA0881
  Rso:  RSc2002
  Atu:  AGl2924
  Sme:  SMb21098
  Mlo:  mll6251 mll9010 mlr6217 mlr9381
_______

[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
  Pya:  PAE1936 PAE2477_2
  Sso:  SSO2433 SSO2637
  Ape:  APE2213
  Dra:  DRA0233 DRA0235
  Mtu:  Rv0374c
  MtC:  MT0389
  Bsu:  BS_yurB
  Bha:  BH0749 BH1978
  Eco:  yagT ygeU ygfN_1
  EcZ:  Z4207 Z4220_1 ZyagT
  Ecs:  ECs0316 ECs3741 ECs3754_1
  Pae:  PA1602 PA1881 PA1931 PA2379 PA4620
  Rso:  RSc0626 RSc1469 RSc1890 RSp0324
  Atu:  AGpA732
  Sme:  SMa1491 SMa2349 SMb20131 SMb20343 SMb20397 SMb20403 SMb21337
        SMb21558 SMc03101
  Mlo:  mll1129 mll2289 mll3837 mlr1701 mlr1925
  Ccr:  CC0022 CC2270
  Tpa:  TP0080
  Bbu:  BB0555
_______

[R] COG2081 Predicted flavoproteins
  Cac:  CAC1849 CAC3590
  Lla:  L56208
  Spy:  SPy1866
  Spn:  SP0741
  Sau:  SA1576
  Lin:  lin2032
  Bsu:  BS_ytfP
  Bha:  BH3279
  Syn:  sll0586
  Nos:  all4556
  Eco:  yhiN
  EcZ:  ZyhiN
  Ecs:  ECs4364
  Ype:  YPO3966
  Sty:  STM3588
  Vch:  VC0080
  Pae:  PA0559 PA3949
  Hin:  HI0933
  Pmu:  PM0031
  Rso:  RSc2218 RSc3158
  Atu:  AGc1070 AGl1622
  Sme:  SMb20319 SMc00763
  Bme:  BMEI0614 BMEI0946
  Ccr:  CC0638 CC1477
_______

[H] COG2082 Precorrin isomerase
  Afu:  AF0724_2
  Hbs:  VNG1567G
  Mac:  MA4258
  Mth:  MTH227
  Mja:  MJ0930
  Mka:  MK1196
  Tac:  Ta0654
  Tvo:  TVN0922
  Pya:  PAE0343_2
  Sso:  SSO2308_2
  Fnu:  FN0970
  Cac:  CAC1376
  Mtu:  Rv2065
  MtC:  MT2125
  Lin:  lin1156
  Syn:  sll0794_2 sll0916 slr1467
  Nos:  all0456 all2544 alr3162_2
  Sty:  STM2033
  Pae:  PA2905
  Rso:  RSp0623_2
  Atu:  AGc5081
  Sme:  SMc03192
  Bme:  BMEI0714
  Mlo:  mlr1379
_______

[S] COG2083 Uncharacterized protein conserved in archaea
  Afu:  AF0460
  Mth:  MTH949
  Mja:  MJ1224
  Mka:  MK1676
  Pho:  PH0358
  Pab:  PAB1291
_______

[I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
  Mac:  MA0614
  Mth:  MTH1747
  Tac:  Ta0161
  Tvo:  TVN0231
  Pya:  PAE1145 PAE2977
  Sso:  SSO0974 SSO1560
  Ape:  APE0756
  Aae:  aq_038
  Dra:  DR0499
  Cac:  CAC3342
  Mtu:  Rv0751c Rv0770
  MtC:  MT0771 MT0775 MT0794
  Lla:  L81616
  Lin:  lin1004
  Bsu:  BS_yfjR BS_ykwC
  Bha:  BH2634
  Syn:  slr0229
  Nos:  alr3358
  Eco:  ybbQ ygbJ yhaE yihU
  EcZ:  ZybbQ ZyhaE ZyihU
  Ecs:  ECs0570 ECs4003 ECs4805
  Ype:  YPO3648
  Sty:  STM0519 STM2918 STM3248 STM4023
  Vch:  VCA0007
  Pae:  PA0743 PA1500 PA1576 PA2199 PA3312 PA3569
  Hin:  HI1010
  Pmu:  PM1366
  Nme:  NMB1584
  NmA:  NMA1773
  Rso:  RSc2429 RSc3283 RSp0649
  jHp:  jhp0585
  Atu:  AGc4961 AGl1448 AGl1542 AGl3303 AGpA234
  Sme:  SMa0237 SMa0516 SMb20668 SMb20679 SMb20710 SMb20751 SMc00133
        SMc00274 SMc00501 SMc01572
  Bme:  BMEI0688 BMEI1024 BMEII1090
  Mlo:  mlr0254 mlr0552 mlr1203 mlr1689 mlr2606
  Ccr:  CC1354 CC1574
_______

[R] COG2085 Predicted dinucleotide-binding enzymes
  Afu:  AF0892 AF1209
  Hbs:  VNG2607C
  Mac:  MA4235
  Mth:  MTH248
  Mja:  MJ1501
  Mka:  MK0233
  Cgl:  Cgl1231 Cgl2780
  Lla:  L55584
  Nos:  alr8074
  Xfa:  XF1737
  Rso:  RSp1147
  Atu:  AGpA255
  Sme:  SMa0349
  Mlo:  mll0243 mll2039 mlr5281
_______

[C] COG2086 Electron transfer flavoprotein, beta subunit
  Afu:  AF0286
  Hbs:  VNG2150G
  Tac:  Ta0211m Ta0328 Ta0429_1
  Tvo:  TVN1280 TVN1383
  Pya:  PAE0722 PAE3586
  Sso:  SSO2763 SSO2817_1
  Ape:  APE0134 APE2418
  Sce:  YGR207c
  Spo:  SPAC1805.02c
  Tma:  TM1530
  Fnu:  FN0784 FN1534
  Dra:  DR0971
  Cac:  CAC2544 CAC2710
  Cgl:  Cgl1201
  Mtu:  Rv3029c
  MtC:  MT3113
  Mle:  ML1712
  Bsu:  BS_etfB
  Bha:  BH3100
  Eco:  fixA ydiQ ygcR
  EcZ:  ZfixA ZydiQ ZygcR
  Ecs:  ECs0044 ECs2404 ECs3626
  Sty:  STM0075 STM0855 STM1354
  Pae:  PA2952 PA5401
  Xfa:  XF0254
  Nme:  NMB2155
  NmA:  NMA0242
  Rso:  RSc0923 RSp0061
  Atu:  AGl2463
  Sme:  SMa0822 SMa1391 SMc00729
  Bme:  BMEI0096
  Mlo:  mll5862 mlr3487
  Ccr:  CC0727
_______

[H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
  Fnu:  FN0913
  Dra:  DRA0020
  Cac:  CAC1383
  Cgl:  Cgl2151
  Mtu:  Rv0254c
  MtC:  MT0267
  Lin:  lin1111
  Bha:  BH1590 BH1594
  Syn:  slr0216
  Nos:  all3174
  Eco:  cobU
  EcZ:  ZcobU
  Ecs:  ECs2788
  Sty:  STM2018
  Vch:  VC1239
  Pae:  PA1278
  Rso:  RSc2391
  Atu:  AGc2839
  Sme:  SMc04305
  Bme:  BMEI0693
  Mlo:  mll1308
_______

[M] COG2088 Uncharacterized protein, involved in the regulation of septum location
  Afu:  AF1778
  Fnu:  FN0022
  Cac:  CAC3223
  Sau:  SA0456
  Lin:  lin0235 lin0236
  Bsu:  BS_spoVG
  Bha:  BH0064
  Bbu:  BB0785
_______

[M] COG2089 Sialic acid synthase
  Mac:  MA3767
  Mja:  MJ1065
  Fnu:  FN1684
  Cac:  CAC2187
  Bsu:  BS_spsE
  Nme:  NMB0068
  Hpy:  HP0178
  jHp:  jhp0166
  Cje:  Cj1141 Cj1317 Cj1327
  Ccr:  CC2868
  Tpa:  TP0562
_______

[S] COG2090 Uncharacterized protein conserved in archaea
  Afu:  AF1068
  Hbs:  VNG0396C
  Mth:  MTH639
  Mja:  MJ0206
  Mka:  MK1657
  Pho:  PH1059
  Pab:  PAB0623
  Pya:  PAE0628
  Sso:  SSO2224
  Ape:  APE1009
_______

[H] COG2091 Phosphopantetheinyl transferase
  Sce:  YGL154c
  Spo:  SPAC17C9.02c
  Cac:  CAC1329 CAC2006
  Sau:  SA0174
  Bsu:  BS_sfpm
  Bha:  BH1852
  Syn:  slr0495
  Nos:  all5359
  Eco:  yhhU yieE
  EcZ:  Z4867 ZyieE
  Ecs:  ECs4342 ECs4649
  Sty:  STM3583 STM3849
  Hin:  HI0152
  Pmu:  PM0116
  Xfa:  XF1934
  Rso:  RSc1804_3 RSp0163
_______

[J] COG2092 Translation elongation factor EF-1beta
  Afu:  AF0574
  Hbs:  VNG1173G
  Mac:  MA1471
  Mth:  MTH1699
  Mja:  MJ0459
  Mka:  MK0255
  Tac:  Ta0566
  Tvo:  TVN0618
  Pho:  PH0026b
  Pab:  PAB3009
  Pya:  PAE0695
  Sso:  SSO5345
  Ape:  APE2480
  Sce:  YAL003w
  Spo:  SPCC1450.04
_______

[K] COG2093 DNA-directed RNA polymerase, subunit E''
  Afu:  AF1116
  Hbs:  VNG2051G
  Mac:  MA3693
  Mth:  MTH265
  Mja:  MJ0396
  Mka:  MK1452
  Tac:  Ta1090
  Tvo:  TVN0485
  Pho:  PH1908a
  Pab:  PAB7428
  Pya:  PAE3563
  Sso:  SSO5798
  Ape:  APES005
_______

[L] COG2094 3-methyladenine DNA glycosylase
  Ape:  APE2247
  Ecu:  ECU05g1590 ECU11g0140
  Dra:  DR2074
  Cac:  CAC2969
  Mtu:  Rv1688
  MtC:  MT1727.1
  Mle:  ML1351
  Sau:  SA2134
  Lin:  lin0928
  Bsu:  BS_yxlJ
  Pae:  PA4010
  Atu:  AGl2973
  Sme:  SMb20709
  Mlo:  mll4583
  Rpr:  RP351
  Rco:  RC0480
  Cpn:  CPn0505
  Bbu:  BB0422
_______

[U] COG2095 Multiple antibiotic transporter
  Afu:  AF2111
  Mac:  MA3411
  Mja:  MJ0972 MJ1677
  Mka:  MK1198
  Tac:  Ta0019 Ta1070
  Tvo:  TVN0065 TVN0525
  Pho:  PH0214 PH0760
  Pab:  PAB0863 PAB2220
  Pya:  PAE0791 PAE0942 PAE0943
  Sso:  SSO0607
  Ape:  APE2497
  Aae:  aq_540
  Dra:  DR2343
  Bsu:  BS_yvbG
  Nos:  all2000
  Eco:  marC ychE yhgN
  EcZ:  ZychE ZydeB ZyhgN
  Ecs:  ECs1742 ECs2136 ECs4279
  Ype:  YPO2181 YPO2437 YPO3950
  Sty:  STM1521 STM1748 STM3540
  Buc:  BU267 BU449
  Vch:  VC2035
  Pae:  PA4857 PA5205 PA5486
  Pmu:  PM0044 PM1581
  Xfa:  XF2666
  Nme:  NMB1354
  NmA:  NMA1566
  Rso:  RSc2813 RSc2949
  Cje:  Cj1111c
  Atu:  AGc2781
  Sme:  SMa1096 SMc01232
  Bme:  BMEI0403 BMEI0883
  Mlo:  mlr0740
  Ccr:  CC0106 CC1662
  Ctr:  CT852 CT853
  Cpn:  CPn1010 CPn1011
  Tpa:  TP0988
_______

[S] COG2096 Uncharacterized conserved protein
  Afu:  AF1290
  Hbs:  VNG1547C
  Tac:  Ta1434
  Tvo:  TVN0098
  Pho:  PH0671
  Pab:  PAB0911
  Pya:  PAE1715 PAE2378
  Sso:  SSO0377 SSO0588
  Ape:  APE0166
  Fnu:  FN1303
  Dra:  DR1638
  Cgl:  Cgl2506
  Mtu:  Rv1314c
  MtC:  MT1354
  Mle:  ML1149
  Lin:  lin1128_1 lin1172
  Bsu:  BS_yvqK
  Bha:  BH1595
  Sty:  STM2050_1
  Pae:  PA4399
  Rso:  RSc2663
  Atu:  AGl2467
  Sme:  SMc00731
  Bme:  BMEI0092
  Mlo:  mlr3485
  Ccr:  CC0729
_______

[J] COG2097 Ribosomal protein L31E
  Afu:  AF2066
  Hbs:  VNG2467G
  Mac:  MA4113
  Mth:  MTH1612
  Mja:  MJ0049
  Mka:  MK1617
  Tac:  Ta0054
  Tvo:  TVN0010
  Pho:  PH0529a
  Pab:  PAB7387
  Pya:  PAE3095
  Sso:  SSO5671
  Ape:  APE1087
  Sce:  YDL075w YLR406c
  Spo:  SPAC890.08
  Ecu:  ECU03g0230
_______

[S] COG2098 Uncharacterized protein conserved in archaea
  Afu:  AF2043
  Hbs:  VNG0127C
  Mac:  MA0117
  Mth:  MTH1031
  Mja:  MJ0408
  Mka:  MK0786
  Tac:  Ta0999m
  Tvo:  TVN0738
_______

[H] COG2099 Precorrin-6x reductase
  Mth:  MTH1002
  Mja:  MJ0552
  Fnu:  FN0950
  Cac:  CAC1381
  Mtu:  Rv2070c
  MtC:  MT2130
  Lin:  lin1163
  Syn:  slr0252
  Nos:  all1780
  Sty:  STM2026
  Pae:  PA2909
  Rso:  RSp0618_2
  Atu:  AGc5078
  Sme:  SMc03189
  Bme:  BMEI0702
  Mlo:  mll1382
_______

[R] COG2100 Predicted Fe-S oxidoreductase
  Afu:  AF1810
  Mja:  MJ0103
  Mka:  MK0989
  Pho:  PH1615
  Pab:  PAB1998
  Pya:  PAE0616
  Ape:  APE1874
_______

[K] COG2101 TATA-box binding protein (TBP), component of TFIID and TFIIIB
  Afu:  AF0373
  Hbs:  VNG2243G VNG6037G VNG6050G VNG6140G VNG6438G VNG6476G VNG7031
        VNG7038 VNG7100 VNG7114 VNG7171
  Mac:  MA0179 MA0278 MA4331
  Mth:  MTH1627
  Mja:  MJ0507
  Mka:  MK0839
  Tac:  Ta0199
  Tvo:  TVN1394
  Pho:  PH1009
  Pab:  PAB1726
  Pya:  PAE2164
  Sso:  SSO0951
  Ape:  APE1862
  Sce:  YER148w
  Spo:  SPAC29E6.08
  Ecu:  ECU04g1440
_______

[R] COG2102 Predicted ATPases of PP-loop superfamily
  Afu:  AF0720 AF1666
  Hbs:  VNG0391C
  Mac:  MA1374
  Mth:  MTH432
  Mja:  MJ0570
  Mka:  MK0644
  Tac:  Ta0525
  Tvo:  TVN1001
  Pho:  PH0375 PH1257
  Pab:  PAB0415 PAB0759
  Pya:  PAE0374 PAE2672
  Sso:  SSO0678
  Ape:  APE0421 APE2042
  Sce:  YLR143w_1
  Spo:  SPBC577.12_1
  Ecu:  ECU08g1840
_______

[R] COG2103 Predicted sugar phosphate isomerase
  Dra:  DRA0213
  Cac:  CAC0175
  Lla:  L144334
  Sau:  SA0185
  Bsu:  BS_ybbI
  Bha:  BH3575
  Syn:  sll0861
  Nos:  alr2432
  Eco:  yfeU
  EcZ:  ZyfeU
  Ecs:  ECs3299
  Ype:  YPO2925
  Sty:  STM2571
  Vch:  VC0206 VC0690
  Hin:  HI0754
  Pmu:  PM1576
  Sme:  SMc02874
  Mlo:  mll7248 mlr4770
_______

[H] COG2104 Sulfur transfer protein involved in thiamine biosynthesis
  Afu:  AF0737
  Hbs:  VNG2279H
  Mac:  MA2752 MA2950 MA3300
  Mth:  MTH1743
  Tac:  Ta1442
  Tvo:  TVN0116
  Pho:  PH1106a
  Pab:  PAB1622a
  Aae:  aq_025a
  Fnu:  FN1756
  Dra:  DRA0173
  Cac:  CAC2924
  Cgl:  Cgl1992
  Mtu:  Rv0416
  MtC:  MT0429
  Mle:  ML0298
  Bsu:  BS_yjbS
  Bha:  BH1432
  Syn:  ssr0102
  Nos:  asr1344
  Eco:  thiS
  EcZ:  ZthiS
  Sty:  STM4161
  Vch:  VC0064
  Pae:  PA0380
  Xfa:  XF0782
  Nme:  NMB2070
  NmA:  NMA0362
  Rso:  RSc0111
  Cje:  Cj1047c
  Atu:  AGc4652
  Bme:  BMEI1734
  Mlo:  msl5792
  Ccr:  CC1881
_______

[S] COG2105 Uncharacterized conserved protein
  Mac:  MA4655
  Mja:  MJ1514
  Pho:  PH0828
  Pya:  PAE0144
  Sso:  SSO2192_1
  Dra:  DR0328
  Bsu:  BS_ykqA_1
  Bha:  BH1612
  Syn:  slr0491
  Nos:  all3282
  Eco:  ytfP
  EcZ:  ZytfP
  Ecs:  ECs5200
  Ype:  YPO3522
  Sty:  STM4411
  Vch:  VC2546
  Pae:  PA4164
  Rso:  RSc1355
_______

[S] COG2106 Uncharacterized conserved protein
  Afu:  AF1926
  Hbs:  VNG1688C
  Mth:  MTH1
  Mka:  MK0137
  Pho:  PH1779
  Pab:  PAB2119
  Pya:  PAE3431
  Sso:  SSO0720
  Ape:  APE0226
  Sce:  YGR283c YMR310c
  Spo:  SPBC8D2.16c
_______

[R] COG2107 Predicted periplasmic solute-binding protein
  Afu:  AF1704
  Tac:  Ta0174
  Tvo:  TVN0281
  Pya:  PAE1369
  Sso:  SSO2229
  Ape:  APE0248
  Aae:  aq_313
  Dra:  DR1011
  Bha:  BH2689
  Hpy:  HP0152
  jHp:  jhp0140
  Cje:  Cj1674
  Ctr:  CT262
  Cpn:  CPn0411
_______

[R] COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme
  Afu:  AF1217
  Hbs:  VNG2155C
  Mac:  MA3711
  Mja:  MJ0021
  Mka:  MK0987
  Pho:  PH1164
  Pab:  PAB0713
  Pya:  PAE2255
  Sso:  SSO0084
  Ape:  APE0644
  Cac:  CAC3333
_______

[H] COG2109 ATP:corrinoid adenosyltransferase
  Hbs:  VNG1574G
  Mac:  MA2084
  Tac:  Ta1121
  Tvo:  TVN1190
  Pho:  PH0075
  Pab:  PAB2289
  Pya:  PAE0370
  Tma:  TM1465
  Fnu:  FN1790
  Dra:  DRB0008
  Mtu:  Rv2849c
  MtC:  MT2915
  Syn:  slr0260
  Nos:  all0067 all2391 all3802
  Eco:  btuR
  EcZ:  Z0886 ZbtuR
  Ecs:  ECs0756 ECs1842
  Ype:  YPO2214
  Sty:  STM1718
  Vch:  VC1040
  Pae:  PA1272
  Rso:  RSp0616
  Atu:  AGc5090
  Sme:  SMc04302
  Bme:  BMEI0696
  Mlo:  mll1306
_______

[R] COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
  Afu:  AF1521
  Mac:  MA1614
  Mka:  MK0950
  Tac:  Ta1105
  Tvo:  TVN0719
  Pho:  PH1513
  Pab:  PAB0445
  Pya:  PAE1111
  Sso:  SSO2899
  Ape:  APE1648
  Sce:  YBR022w
  Aae:  aq_987
  Tma:  TM0508_2
  Fnu:  FN1951
  Dra:  DR2288
  Mtu:  Rv0060 Rv1899c_2
  MtC:  MT0066 MT1950_2
  Spy:  SPy1216_2
  Sau:  SA0314
  Lin:  lin2902
  Eco:  ymdB
  EcZ:  Z1679
  Ecs:  ECs1423
  Sty:  STM1147 STM1868_1 STM2587
  Pae:  PA1746 PA3693
  Rso:  RSc0334
  Mlo:  mll3540 mll7730
_______

[P] COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit
  Hbs:  VNG0564H VNG0566C
  Mac:  MA4572_2 MA4665
  Mth:  MTH1243 MTH1244
  Mja:  MJ1307
  Pho:  PH0942 PH0943 PH1429 PH1454
  Pab:  PAB0804 PAB0805 PAB1399 PAB1886 PAB2415
  Tma:  TM1110 TM1209
  Dra:  DR0880_2 DR0881
  Cgl:  Cgl0270_2 Cgl2672_2
  Sau:  SA0578_2 SA0579 SA0812 SA0813_2
  Lin:  lin2477_2 lin2478
  Bsu:  BS_shaA_2 BS_yufU
  Bha:  BH1318 BH1319_2
  Syn:  slr2012
  Nos:  all1837
  Vch:  VCA0157_2
  Pae:  PA1054_2
  Atu:  AGc1658_2 AGc1660 AGc903_2
  Sme:  SMc00051_2 SMc00052 SMc03179_2
  Bme:  BMEII0770_2
  Rpr:  RP267_2
  Rco:  RC0355_2
_______

[T] COG2112 Predicted Ser/Thr protein kinase
  Afu:  AF0418
  Mja:  MJ1211
  Pho:  PH1307
  Pab:  PAB0564
  Pya:  PAE1625
  Sso:  SSO1038
  Ape:  APE1790
  Aae:  aq_578
_______

[E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components
  Mac:  MA2147
  Lla:  L72477_2
  Spy:  SPy0184_2
  Lin:  lin1015 pli0045
  Bsu:  BS_opuAC
  Eco:  proX
  EcZ:  ZproX
  Ecs:  ECs3542
  Ype:  YPO2645
  Sty:  STM2811
  Pae:  PA0030 PA3236 PA5096 PA5103 PA5378 PA5388
  Rso:  RSp0064
  Atu:  AGc1631 AGc3730 AGc4148 AGl1618 AGl1793 AGl2067 AGl470
        AGpA305
  Sme:  SMa1729 SMb20410 SMb21572 SMc00672 SMc02378 SMc02737 SMc04311
        SMc04341
  Bme:  BMEI0441 BMEII0550
  Mlo:  mll2746 mll7332 mlr1996
  Bbu:  BB0144
_______

[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  Mac:  MA1562
  Sce:  YJL005w_3
  Spo:  SPBC19C7.03_3
  Ecu:  ECU06g0960
  Cgl:  Cgl0311
  Mtu:  Rv0386_1 Rv0891c Rv1120c Rv1264 Rv1318c Rv1319c Rv1320c
        Rv1358_1 Rv1359 Rv1625c Rv1647 Rv1900c_2 Rv2212 Rv2435c_2
        Rv2488c_1 Rv3645
  MtC:  MT0399_1 MT0915 MT1152 MT1302 MT1359 MT1360 MT1361
        MT1362 MT1402_1 MT1403 MT1661 MT1685 MT1951_2 MT2268
        MT2509_2 MT2563_1 MT3748
  Mle:  ML0201 ML1399 ML1753_1 ML2341_1
  Syn:  sll0646_2 sll1161_2 slr1991_2
  Nos:  all0661 all0743_2 all1118_2 all1904_3 all4963_5 alr2266_3
  Pae:  PA3217
  Atu:  AGc2127 AGc4673_2 AGl1679
  Sme:  SMa0464_1 SMa0570_1 SMa0579 SMa1045 SMa1046 SMa1103 SMa1583_1
        SMa1591_1 SMa1789_1 SMa2357 SMb20257 SMb20300_1 SMb20358_3 SMb20539_1
        SMb20707 SMb20776_2 SMb21086 SMb21257 SMb21258 SMc00339_2 SMc00621
        SMc01491_1 SMc01818_2 SMc02176_2 SMc02285 SMc03099_1 SMc03937 SMc03985_1
        SMc04172 SMc04292_1 SMc04307_2 SMc04343
  Mlo:  mll0576_1 mll1022_1 mll2837_1 mll3242 mll3269 mll3276_1 mll4049_1
        mll5392_2 mll6463 mlr1023_1 mlr3263 mlr3277_1 mlr4588
  Ccr:  CC2703
  Tpa:  TP0485
_______

[G] COG2115 Xylose isomerase
  Tma:  TM1667
  Lla:  L0230
  Bsu:  BS_xylA
  Bha:  BH2757
  Eco:  xylA
  EcZ:  ZxylA
  Ecs:  ECs4448
  Ype:  YPO4038
  Sty:  STM3661
  Hin:  HI1112
  Atu:  AGl774
  Sme:  SMc03163
  Bme:  BMEI1387
  Mlo:  mlr5036
_______

[P] COG2116 Formate/nitrite family of transporters
  Mka:  MK0314
  Sce:  YHL008c
  Fnu:  FN1141
  Cac:  CAC1512
  Lla:  L195318
  Spy:  SPy1424
  Spn:  SP1215
  Sau:  SA0293 SA2191
  Lin:  lin0602 lin0912
  Bsu:  BS_yrhG BS_ywcJ
  Eco:  focA focB nirCm yfdC
  EcZ:  ZfocA ZfocB ZnirCm ZyfdC
  Ecs:  ECs0987 ECs3230 ECs3354 ECs4218
  Ype:  YPO0159 YPO1384
  Sty:  STM0974 STM2393 STM3476
  Vch:  VC1695 VCA0540_1
  Pae:  PA2777
  Hin:  HI0181
  Pmu:  PM0074
_______

[J] COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
  Hbs:  VNG2006C
  Mac:  MA4115
  Mth:  MTH1614
  Mja:  MJ0690
  Pho:  PH0276
  Pab:  PAB0172
_______

[R] COG2118 DNA-binding protein
  Afu:  AF2068
  Hbs:  VNG2008H
  Mac:  MA4116
  Mth:  MTH1615
  Mja:  MJ0691
  Mka:  MK1619
  Tac:  Ta0052
  Tvo:  TVN0008
  Pho:  PH1060
  Pab:  PAB0620
  Pya:  PAE3044
  Sso:  SSO0352
  Ape:  APE1088a
  Sce:  YMR074c
  Spo:  SPAC23C4.09c
_______

[S] COG2119 Predicted membrane protein
  Hbs:  VNG0535C
  Sce:  YBR187w
  Spo:  SPAC17G8.08c SPAC186.05c
  Mtu:  Rv3848
  MtC:  MT3963
  Syn:  sll0615 slr1170 ssr1558
  Nos:  alr1698 alr5134 alr5135
  Vch:  VC0022
  Pae:  PA4629
  Rso:  RSc2100
  Ccr:  CC2370
_______

[S] COG2120 Uncharacterized proteins, LmbE homologs
  Mac:  MA2464
  Mka:  MK0489
  Pho:  PH0499
  Pab:  PAB1341
  Sso:  SSO2901
  Sce:  YMR281w
  Spo:  SPAPB2B4.01c
  Ecu:  ECU08g0300
  Dra:  DR0081 DR0450 DR1203 DR2363a DRA0063 DRA0132
  Cgl:  Cgl0963 Cgl1059 Cgl1076
  Mtu:  Rv0323c Rv1082 Rv1170
  MtC:  MT0338 MT1113 MT1207
  Mle:  ML1495 ML2391
  Sau:  SA0525
  Bsu:  BS_yojGm BS_ypjG
  Bha:  BH1682 BH3320
  Eco:  yaiS
  Ype:  YPO0083
  Atu:  AGl171 AGl453_1
  Sme:  SMb21057 SMb21247 SMc00503
  Bme:  BMEII0826
  Mlo:  mll5304
_______

[S] COG2121 Uncharacterized protein conserved in bacteria
  Aae:  aq_2031
  Fnu:  FN1269
  Hpy:  HP0270
  jHp:  jhp0255
  Cje:  Cj0457c
  Bme:  BMEI1508 BMEII1030
  Mlo:  mlr8268
  Ccr:  CC0304
  Rpr:  RP090
  Rco:  RC0119
_______

[S] COG2122 Uncharacterized conserved protein
  Afu:  AF0649
  Mac:  MA1715
  Mth:  MTH727
  Mja:  MJ1526
  Mka:  MK0206
  Mlo:  mll4878
_______

[J] COG2123 RNase PH-related exoribonuclease
  Afu:  AF0494
  Mac:  MA1776
  Mth:  MTH682
  Mka:  MK0380
  Tac:  Ta1294m
  Tvo:  TVN0308
  Pho:  PH1548
  Pab:  PAB0421
  Pya:  PAE2206
  Sso:  SSO0732
  Ape:  APE1445
  Sce:  YDL111c YDR280w
  Spo:  SPBC16G5.10 SPBC17D1.03c SPCC757.08
  Ecu:  ECU06g0390
_______

[Q] COG2124 Cytochrome P450
  Hbs:  VNG0422G
  Sce:  YDR402c YHR007c YMR015c
  Spo:  SPAC13A11.02c SPAC19A8.04
  Dra:  DR1723 DR2473 DR2538 DRA0186 DRC0001
  Cac:  CAC3330
  Cgl:  Cgl0539
  Mtu:  Rv0136 Rv0327c Rv0568 Rv0764c Rv0766c Rv0778 Rv1256c
        Rv1394c Rv1666c Rv1777 Rv1785c Rv1880c Rv2266 Rv2268c
        Rv2276 Rv3059 Rv3121 Rv3518c Rv3545c Rv3685c
  MtC:  MT0144 MT0342 MT0594 MT0788 MT0790 MT0802 MT1295
        MT1439 MT1706 MT1827 MT1834 MT1929 MT2328 MT2330
        MT2336 MT3145 MT3203 MT3619 MT3649 MT3787
  Mle:  ML0447 ML2088
  Bsu:  BS_bioI BS_cypA BS_cypX BS_pksS BS_ybdT BS_yetO_1 BS_yjiB
        BS_yrhJ_1
  Bha:  BH0579 BH1757
  Syn:  slr0574
  Nos:  all1361 all3746 alr1450 alr4686 alr4766 alr4833
  Pae:  PA2475 PA3331 PA3679
  Xfa:  XF0356 XF0377
  Rso:  RSp0709
  Cje:  Cj1411c
  Atu:  AGc2319 AGc2890 AGpT272 AGpT273
  Sme:  SMc01812 SMc02579
  Bme:  BMEII0879
  Mlo:  mll6125 mll8468 mll8742 mlr5192 mlr5876 mlr6364 mlr6365
        mlr6367
  Ccr:  CC0063 CC0946 CC2494 CC2997
_______

[J] COG2125 Ribosomal protein S6E (S10)
  Afu:  AF0511
  Hbs:  VNG2514G
  Mac:  MA1526
  Mth:  MTH260
  Mja:  MJ1260
  Mka:  MK1446
  Tac:  Ta0323m
  Tvo:  TVN1275
  Pho:  PH0615
  Pab:  PAB1427
  Pya:  PAE1505
  Sso:  SSO0411
  Ape:  APE2371
  Sce:  YBR181c YPL090c
  Spo:  SPAC13G6.07c SPAPB1E7.12
  Ecu:  ECU05g0670
_______

[J] COG2126 Ribosomal protein L37E
  Afu:  AF0874
  Hbs:  VNG1494G
  Mac:  MA3194
  Mth:  MTH648
  Mja:  MJ0098
  Mka:  MK0221
  Tac:  Ta1241
  Tvo:  TVN0355
  Pho:  PHS041
  Pab:  PAB7160
  Sso:  SSO6453
  Ape:  APES023
  Sce:  YDR500c YLR185w
  Spo:  SPCC1223.05c
  Ecu:  ECU07g1460
_______

[S] COG2127 Uncharacterized conserved protein
  Dra:  DR0586
  Cac:  CAC1823
  Cgl:  Cgl2465
  Mtu:  Rv1331
  MtC:  MT1373
  Mle:  ML1165
  Syn:  ssl3379 ssr2723
  Nos:  all0404 asl4325
  Eco:  yljA
  EcZ:  ZyljA
  Ecs:  ECs0967
  Ype:  YPO1367
  Sty:  STM0944
  Vch:  VC1143
  Pae:  PA2621
  Xfa:  XF1442
  Nme:  NMB0837
  NmA:  NMA1046
  Rso:  RSc2465
  Hpy:  HP0032
  jHp:  jhp0028
  Cje:  Cj1107
  Atu:  AGc2522 AGc4060
  Sme:  SMc02110 SMc02694
  Bme:  BMEI0815
  Mlo:  mll0664 mll2736
  Ccr:  CC2467
_______

[S] COG2128 Uncharacterized conserved protein
  Afu:  AF2408
  Mac:  MA2469
  Dra:  DR1765
  Cac:  CAC1466
  Cgl:  Cgl2318 Cgl2381_2
  Mtu:  Rv0464c Rv1531 Rv2313c Rv2429 Rv3327_2
  MtC:  MT0480 MT1582 MT2376 MT2504 MT3430_2
  Mle:  ML2465
  Spn:  SP0409
  Sau:  SA2262
  Bsu:  BS_ydfG
  Bha:  BH0424
  Nos:  all5371 alr7524
  Eco:  yciW_2 ynjA
  EcZ:  Z3974 ZyciW_2 ZynjA
  Ecs:  ECs1860_2 ECs2459 ECs3535
  Ype:  YPO2360_2
  Sty:  STM1701_2 STM2804
  Pae:  PA0269 PA2331
  Nme:  NMB0995
  NmA:  NMA1203
  Rso:  RSc1645 RSc1888 RSc2199
  Atu:  AGc3724 AGc871 AGpA625 AGpT131 AGpT134
  Sme:  SMb20029 SMb20278 SMc01460 SMc02239
  Bme:  BMEII0578
  Mlo:  mll1121 mll1641 mll1719 mll6874 mlr4105
  Ccr:  CC1784 CC3095 CC3698
_______

[R] COG2129 Predicted phosphoesterases, related to the Icc protein
  Afu:  AF0533
  Mac:  MA1449
  Mth:  MTH1882
  Mja:  MJ1162
  Mka:  MK1469
  Pho:  PH0305
  Pab:  PAB1249
  Pya:  PAE1087
  Sso:  SSO2085 SSO2237 SSO2725 SSO2729
  Ape:  APE2283
  Aae:  aq_1956
  Sme:  SMb20081
_______

[R] COG2130 Putative NADP-dependent oxidoreductases
  Hbs:  VNG0815G
  Sce:  YML131w
  Spo:  SPAPB24D3.08c
  Sau:  SA1989
  Bsu:  BS_yfmJ
  Nos:  all1188 all5008
  Eco:  yncB
  EcZ:  ZyncB
  Ecs:  ECs2053
  Sty:  STM1589
  Pae:  PA1648 PA2197
  Rso:  RSc1766
  Mlo:  mlr6843
  Ccr:  CC2016
_______

[F] COG2131 Deoxycytidylate deaminase
  Afu:  AF1764
  Mac:  MA0136 MA0137
  Mka:  MK0935_1
  Tac:  Ta0312
  Tvo:  TVN1288
  Pho:  PH1589
  Pab:  PAB1975
  Sce:  YHR144c
  Spo:  SPBC2G2.13c
  Tma:  TM0404
  Fnu:  FN1902
  Dra:  DR2631
  Cac:  CAC2876
  Lla:  L155044
  Spy:  SPy1823
  Spn:  SP0744
  Sau:  SA1417
  Lin:  lin1518
  Bsu:  BS_comEB
  Bha:  BH1334
  Vch:  VC0175 VCA0840
  Tpa:  TP0274
  Mpu:  MYPU_2780
_______

[Q] COG2132 Putative multicopper oxidases
  Hbs:  VNG1187G
  Pya:  PAE1888
  Sce:  YDR506c YFL041w YMR058w
  Spo:  SPAC1F7.08
  Aae:  aq_1130
  Cgl:  Cgl0921 Cgl2906
  Mtu:  Rv0846c
  MtC:  MT0869
  Bsu:  BS_cotA
  Bha:  BH2082
  Nos:  all3942
  Eco:  sufI yacK
  EcZ:  ZsufI ZyacK
  Ecs:  ECs0127 ECs3901
  Ype:  YPO0673 YPO3409
  Sty:  STM0168 STM3172
  Pae:  PA2065 PA3768
  Hin:  HI0731 HI0732 HI0733
  Pmu:  PM0104 PM1938
  Xfa:  XF0132 XF2677
  Nme:  NMB1623
  NmA:  NMA1887
  Rso:  RSc2297_1 RSc2298 RSc2299 RSp0656 RSp1503_1 RSp1530
  Cje:  Cj1516
  Atu:  AGl1722 AGl970
  Sme:  SMa1007 SMa1038 SMa1250 SMc01754 SMc02282
  Bme:  BMEII0580 BMEII0988
  Mlo:  mll3586 mlr6496
  Ccr:  CC0964
_______

[G] COG2133 Glucose/sorbosone dehydrogenases
  Pya:  PAE2689
  Dra:  DR1257 DRA0203
  Mtu:  Rv3006
  MtC:  MT3086
  Mle:  ML1699
  Bha:  BH2090
  Syn:  slr1608
  Nos:  all4539
  Eco:  yliI
  EcZ:  ZyliI
  Ecs:  ECs0917
  Sty:  STM0861_2
  Pae:  PA1112 PA2414
  Xfa:  XF1735 XF1740
  Rso:  RSc0932
  Atu:  AGl1629
  Sme:  SMa0226 SMa0564 SMa1833 SMb20301 SMb21364 SMc01583 SMc04291
  Mlo:  mll4619
  Ccr:  CC0777 CC1507
  Bbu:  BB0024
_______

[I] COG2134 CDP-diacylglycerol pyrophosphatase
  Mtu:  Rv2289
  MtC:  MT2346
  Mle:  ML1417
  Eco:  cdh
  EcZ:  Zcdh
  Ecs:  ECs4843
  Ype:  YPO3986
  Sty:  STM4064
  Hpy:  HP0871
  jHp:  jhp0805
_______

[S] COG2135 Uncharacterized conserved protein
  Hbs:  VNG0686C VNG6095C VNG7072
  Sce:  YMR114c
  Cgl:  Cgl0741
  Mtu:  Rv3226c
  MtC:  MT3323.1
  Mle:  ML0793
  Bsu:  BS_yoaM BS_yobE BS_yoqW
  Nos:  all3194
  Eco:  yedK
  EcZ:  ZyedK
  Ecs:  ECs2670
  Sty:  STM1053
  Pae:  PA4634
  Atu:  AGc1954 AGpA140
  Sme:  SMa0882 SMa0883 SMc02553
  Bme:  BMEI1275
  Mlo:  mll7390 mll8062 mll9711 mlr7795 mlr9712
_______

[JA] COG2136 Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain
  Afu:  AF1106
  Mac:  MA1741
  Mth:  MTH680
  Mja:  MJ0594
  Mka:  MK0377
  Pho:  PH1900
  Pab:  PAB2357
  Pya:  PAE2201
  Sso:  SSO0731
  Ape:  APE1443
  Sce:  YHR088w YNL075w
  Spo:  SPAC19A8.07c SPAC4F8.04
  Ecu:  ECU11g1910 ECU11g1940
_______

[R] COG2137 Uncharacterized protein conserved in bacteria
  Tma:  TM1858
  Fnu:  FN0548
  Dra:  DR1310
  Cac:  CAC2410
  Cgl:  Cgl1909
  Mtu:  Rv2736c
  MtC:  MT2805
  Mle:  ML0988
  Lla:  L43222
  Spy:  SPy1607
  Spn:  SP1902
  Sau:  SA1690
  Lin:  lin1801
  Bsu:  BS_yfhG
  Bha:  BH0924
  Eco:  oraA
  EcZ:  ZoraA
  Ecs:  ECs3555
  Ype:  YPO3306
  Sty:  STM2828
  Vch:  VC0544
  Pae:  PA3616
  Hin:  HI0599
  Pmu:  PM1816
  Nme:  NMB1479
  NmA:  NMA1689
  Rso:  RSc0552
  Atu:  AGl1649
  Tpa:  TP1023
_______

[S] COG2138 Uncharacterized conserved protein
  Afu:  AF0721
  Hbs:  VNG1093C VNG1561Cm_1 VNG1570H
  Mac:  MA3631
  Mth:  MTH1397
  Mja:  MJ0970
  Mka:  MK0428
  Pya:  PAE0343_1
  Sso:  SSO0410 SSO2308_1
  Dra:  DR2241 DRA0012
  Cgl:  Cgl2752
  Mtu:  Rv0259c Rv2393
  MtC:  MT0272 MT2463
  Sau:  SA2189
  Bsu:  BS_ylnE
  Bha:  BH1496
  Syn:  sll0037 slr0292
  Nos:  alr0519
  Rso:  RSc2418 RSp0623_1
_______

[J] COG2139 Ribosomal protein L21E
  Afu:  AF1529
  Hbs:  VNG1170G
  Mac:  MA1446
  Mth:  MTH1323
  Mja:  MJ0040
  Mka:  MK1660
  Tac:  Ta1297
  Tvo:  TVN0312
  Pho:  PHS032
  Pab:  PAB0731
  Pya:  PAE3334
  Sso:  SSO0752
  Ape:  APE0548a
  Sce:  YBR191w YPL079w
  Spo:  SPAC959.08 SPBC365.03c
  Ecu:  ECU05g0900
_______

[GR] COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
  Afu:  AF1494
  Mac:  MA0821
  Pho:  PH1956
  Pab:  PAB1199
  Bsu:  BS_yoaN BS_yvrK
  Syn:  sll1358
  Sty:  STM2757
  Rso:  RSp1432
  Atu:  AGl224
  Sme:  SMa1331 SMb20857 SMc02042
  Mlo:  mlr3390
_______

[C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  Afu:  AF1066 AF1196 AF2411
  Hbs:  VNG0930G VNG1342Gm
  Mac:  MA3733
  Mth:  MTH1752
  Mja:  MJ1534
  Mka:  MK0524
  Sso:  SSO1532
  Dra:  DR0611 DRA0120
  Cgl:  Cgl0697 Cgl0986 Cgl0989 Cgl1192 Cgl1604 Cgl2071 Cgl2169
        Cgl2258 Cgl2726 Cgl2879
  Mtu:  Rv0044c Rv0132c Rv0407 Rv0791c Rv0940c Rv0953c Rv1360
        Rv1855c Rv1936 Rv2161c Rv2893 Rv2951c Rv3072c Rv3079c
        Rv3093c Rv3192 Rv3463 Rv3520c Rv3618
  MtC:  MT0050 MT0140 MT0420 MT0816 MT0967 MT0980 MT1405
        MT1903 MT1986 MT2219 MT2961 MT3025 MT3157 MT3164
        MT3283 MT3569 MT3621 MT3720
  Mle:  ML0131 ML0269 ML0348 ML1106
  Spy:  SPy1218
  Spn:  SP0267
  Sau:  SA0312 SA0327 SA1451
  Lin:  lin2437 lin2439
  Bsu:  BS_yceB BS_yddN BS_ygcA BS_ytmO BS_ytnJ BS_yvbT BS_ywcH
        BS_yxeK
  Bha:  BH0875
  Nos:  all2653 alr2526
  Eco:  ycbN ycdM yhbW
  EcZ:  Z1511 ZycbN ZyhbW
  Ecs:  ECs1018 ECs1258 ECs4041
  Ype:  YPO3484 YPO3625
  Sty:  STM3276
  Pae:  PA1186 PA2090 PA2326 PA2348 PA2356 PA2483 PA2598
        PA2600 PA3444 PA3954 PA4155
  Xfa:  XF1379
  Rso:  RSc1339 RSc2462 RSp0641_4 RSp0908 RSp1227
  Atu:  AGc4197 AGc4543 AGl1143 AGl1243 AGl1468 AGl2217 AGl2330
        AGl2754 AGl2756 AGl2763 AGl2773 AGl2792 AGl2796 AGl2803
        AGl2804 AGl2922 AGl3078 AGpA318 AGpA784 AGpT121 AGpT123
        AGpT152 AGpT154 AGpT161
  Sme:  SMa0794 SMa2101 SMb20100 SMb21003 SMb21691 SMc03968
  Bme:  BMEI0017 BMEI0894
  Mlo:  mll2278 mll2315 mll3445 mll4170 mll4558 mll5137 mll5138
        mll9123 mll9178 mlr4867 mlr4872 mlr4873 mlr5216 mlr5218
        mlr5427 mlr5787 mlr5881 mlr7299 mlr9217
  Ccr:  CC1169 CC1957 CC2798
  Mpu:  MYPU_4400
_______

[C] COG2142 Succinate dehydrogenase, hydrophobic anchor subunit
  Afu:  AF0684
  Tac:  Ta1004
  Tvo:  TVN0744
  Ape:  APE0947
  Dra:  DR0953
  Mtu:  Rv3317
  MtC:  MT3418
  Mle:  ML0698
  Eco:  sdhD
  EcZ:  ZsdhD
  Ecs:  ECs0747
  Ype:  YPO1110
  Sty:  STM0733
  Vch:  VC2090
  Pae:  PA1582
  Xfa:  XF1071
  Nme:  NMB0949
  NmA:  NMA1144
  Rso:  RSc1995
  Atu:  AGc4793
  Sme:  SMc02464
  Bme:  BMEI0160
  Mlo:  mll4265
  Ccr:  CC3528
  Rpr:  RP127
  Rco:  RC0169
_______

[O] COG2143 Thioredoxin-related protein
  Aae:  aq_1343 aq_1669
  Tma:  TM1142
  Hpy:  HP0377
  jHp:  jhp1004
_______

[R] COG2144 Selenophosphate synthetase-related proteins
  Mac:  MA4193
  Mth:  MTH1864
  Mja:  MJ0640 MJ0799
  Mka:  MK0795 MK0889 MK1558
  Syn:  sll0787
_______

[H] COG2145 Hydroxyethylthiazole kinase, sugar kinase family
  Afu:  AF2075
  Mac:  MA2723
  Pho:  PH1157
  Pab:  PAB2432
  Sce:  YPL214c_2
  Spo:  SPAC23H4.10c_2
  Cac:  CAC3096
  Cgl:  Cgl1429
  Lla:  L94809
  Spn:  SP0717 SP0724
  Sau:  SA1895
  Lin:  lin0341
  Bsu:  BS_thiK
  Bha:  BH3349
  Eco:  thiM
  EcZ:  ZthiM
  Ecs:  ECs2907
  Sty:  STM2147
  Hin:  HI0415
  Pmu:  PM1262
  Hpy:  HP0845
  jHp:  jhp0783
  Atu:  AGl3060
_______

[PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
  Hbs:  VNG0388C
  Mac:  MA2969
  Tac:  Ta0140 Ta0428 Ta0884
  Tvo:  TVN0978
  Pya:  PAE0272 PAE2734
  Sso:  SSO0312 SSO1230 SSO2080 SSO2891 SSO2937
  Spo:  SPAC26F1.14c_1
  Dra:  DR1950
  Cgl:  Cgl2981
  Mtu:  Rv0253
  Sau:  SA2187
  Bsu:  BS_nasE
  Bha:  BH0614
  Syn:  slr1205
  Nos:  all0921
  Eco:  hcaC nirD
  EcZ:  ZhcaC ZnirD
  Ecs:  ECs3406 ECs4217
  Ype:  YPO0160 YPO0928
  Sty:  STM3475
  Pae:  PA1780 PA4711
  Xfa:  XF1472
  Rso:  RSc1043 RSc1088 RSp1221
  Atu:  AGl1892
  Sme:  SMa1732 SMa2053 SMb20819 SMb20985 SMc01993
  Mlo:  mll1732 mlr1408 mlr2863 mlr4999 mlr7628
  Ccr:  CC0068 CC0616 CC2530
_______

[J] COG2147 Ribosomal protein L19E
  Afu:  AF1907
  Hbs:  VNG1713G
  Mac:  MA1090
  Mth:  MTH21
  Mja:  MJ0473
  Mka:  MK0031
  Tac:  Ta1253
  Tvo:  TVN0343
  Pho:  PH1759
  Pab:  PAB2134
  Pya:  PAE2100
  Sso:  SSO0700
  Ape:  APE0348
  Sce:  YBL027w YBR084c-a
  Spo:  SPBC56F2.02 SPCC1682.14
  Ecu:  ECU06g1080i
_______

[M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis
  Hbs:  VNG0011C
  Tma:  TM0632
  Fnu:  FN1695
  Dra:  DRA0034
  Cac:  CAC2330 CAC3059 CAC3073
  Cgl:  Cgl0348
  Spn:  SP0350 SP1838
  Sau:  SA0124 SA0156
  Bsu:  BS_tuaA BS_yvfC
  Bha:  BH3650 BH3716
  Syn:  sll1535 slr0820
  Nos:  all2285_2 all2854 all4160_2 all4420 all4719 all4829 alr2834
        alr4823
  Eco:  wcaJ
  EcZ:  ZwcaJ
  Ecs:  ECs2852
  Sty:  STM2082 STM2103
  Vch:  VC0263 VC0934
  Pae:  PA2231
  Hin:  HI0872
  Pmu:  PM1011
  Xfa:  XF2367
  Nme:  NMB1820_1
  NmA:  NMA0639_1
  Rso:  RSp1008
  Cje:  Cj1124c
  Atu:  AGc157 AGc2280 AGl2989
  Sme:  SMb20946 SMb21071 SMb21246 SMc01792
  Bme:  BMEI1177
  Mlo:  mll5252 mll8435 mlr6766 mlr7570
  Ccr:  CC0166 CC1486 CC2384 CC2425
_______

[S] COG2149 Predicted membrane protein
  Aae:  aq_913
  Cgl:  Cgl0103
  Mtu:  Rv2272
  MtC:  MT2333
  Syn:  sll0847
  Nos:  alr2802
  Eco:  yidH
  EcZ:  ZyidH
  Ecs:  ECs4617
  Sty:  STM3805
_______

[R] COG2150 Predicted regulator of amino acid metabolism, contains ACT domain
  Afu:  AF1020
  Hbs:  VNG2296C
  Mac:  MA1396
  Mth:  MTH1654
  Tac:  Ta0033 Ta1106
  Tvo:  TVN0041 TVN0456
  Pho:  PH0306 PH1554
  Pab:  PAB1089 PAB2435
_______

[R] COG2151 Predicted metal-sulfur cluster biosynthetic enzyme
  Mac:  MA2398 MA2721_2
  Mth:  MTH1664
  Mja:  MJ1129
  Mka:  MK0287
  Tac:  Ta0200
  Tvo:  TVN1393
  Pho:  PH0311
  Pab:  PAB1087
  Pya:  PAE2055
  Sso:  SSO0601 SSO1234 SSO1645 SSO1866
  Ape:  APE1979
  Tma:  TM0487
  Dra:  DR0998_1 DR2165 DR2383
  Cgl:  Cgl1522
  Mtu:  Rv1466
  MtC:  MT1513
  Mle:  ML0598
  Lla:  L106356
  Spy:  SPy0783
  Spn:  SP1074 SP2125
  Sau:  SA0833
  Lin:  lin2362
  Bsu:  BS_yitW
  Bha:  BH0199 BH2173
  Eco:  paaD
  Xfa:  XF2000
  Rso:  RSp0607
  Atu:  AGc3341
  Sme:  SMa1255 SMb21637 SMc00302
  Bme:  BMEI1038 BMEII0992
  Mlo:  mlr0023
  Ccr:  CC1859
_______

[G] COG2152 Predicted glycosylase
  Mac:  MA2382 MA2831 MA2834
  Pho:  PH1107
  Pab:  PAB1622
  Ape:  APE0339
  Aae:  aq_1142
  Tma:  TM0782 TM1225 TM1852
  Lin:  lin0857
  Ype:  YPO2474
_______

[R] COG2153 Predicted acyltransferase
  Spo:  SPAC11D3.02c
  Cgl:  Cgl2698
  Mtu:  Rv2851c
  MtC:  MT2917
  Lla:  L9876
  Bha:  BH2982
  Syn:  sll0451
  Eco:  elaA
  EcZ:  ZelaA
  Ecs:  ECs3155
  Sty:  STM2312
  Vch:  VC2565
  Pae:  PA0115
  Bme:  BMEI1820
_______

[H] COG2154 Pterin-4a-carbinolamine dehydratase
  Hbs:  VNG1773G
  Pya:  PAE2713
  Sso:  SSO2187
  Sce:  YHL018w
  Spo:  SPAC27D7.04
  Aae:  aq_049
  Cgl:  Cgl0457
  Mtu:  Rv3110
  MtC:  MT1196 MT3193 MT3426
  Mle:  ML1503A
  Syn:  ssl2296
  Nos:  asr4549
  Vch:  VCA0827
  Pae:  PA0871
  Xfa:  XF2604
  Rso:  RSc3356
  Sme:  SMc03834
  Bme:  BMEI1864
  Mlo:  mlr4350
  Ccr:  CC0245
_______

[S] COG2155 Uncharacterized conserved protein
  Mac:  MA3550 MA4067
  Cac:  CAC0976
  Bsu:  BS_yuzA
  Bha:  BH3345
  Sme:  SMa1078
  Mlo:  mlr1797
  Rpr:  RP169
  Ctr:  CT001
  Cpn:  CPn0001
_______

[P] COG2156 K+-transporting ATPase, c chain
  Hbs:  VNG6178G
  Tac:  Ta1308m
  Tvo:  TVN0501
  Dra:  DRB0087
  Cac:  CAC3680
  Mtu:  Rv1031
  MtC:  MT1060
  Sau:  SA0071 SA1879
  Lin:  lin2828 pli0055
  Syn:  slr1730
  Nos:  all3151 all4243
  Eco:  kdpC
  EcZ:  ZkdpC
  Ecs:  ECs0724
  Ype:  YPO2690
  Sty:  STM0704
  Pae:  PA1635
  Rso:  RSc3384
  Atu:  AGl2092
  Sme:  SMa2329
  Mlo:  mll3129
  Ccr:  CC1593
_______

[J] COG2157 Ribosomal protein L20A (L18A)
  Afu:  AF2064
  Mac:  MA4111
  Mth:  MTH1610
  Mja:  MJ0595
  Mka:  MK1615
  Pho:  PHS021
  Pab:  PAB7388
  Pya:  PAE3098
  Sso:  SSO5668
  Ape:  APE1084a
  Sce:  YMR242c YOR312c
  Spo:  SPAC3A12.10 SPAC26A3.04
  Ecu:  ECU08g0600i
_______

[R] COG2158 Uncharacterized protein containing a Zn-finger-like domain
  Afu:  AF1105
  Mac:  MA0942_2
  Mth:  MTH1403_2
  Mja:  MJ0836
  Mka:  MK0522
  Cac:  CAC2444
_______

[R] COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold
  Hbs:  VNG0297H
  Mka:  MK0426
  Pho:  PH0093
  Pab:  PAB0058
  Sso:  SSO1189 SSO1643 SSO2112 SSO2553 SSO3016
  Ape:  APE2240 APE2502
  Cac:  CAC3337
  Cgl:  Cgl0287
  Mtu:  Rv1879 Rv2303c Rv3510c
  MtC:  MT1928 MT2360 MT3614
  Sau:  SA2366
  Lin:  lin0862
  Syn:  slr0619
  Atu:  AGc2623 AGc4595
  Sme:  SMa1734 SMb20137 SMb20138
  Mlo:  mlr9221 mlr9222
  Ccr:  CC3179
_______

[G] COG2160 L-arabinose isomerase
  Tma:  TM0276
  Cac:  CAC1342 CAC1346
  Bsu:  BS_araA
  Bha:  BH1873
  Eco:  araA
  EcZ:  ZaraA
  Ecs:  ECs0066
  Ype:  YPO2253
  Sty:  STM0102
  Sme:  SMb21420
_______

[D] COG2161 Antitoxin of toxin-antitoxin stability system
  Hbs:  VNG6193H VNG6288C
  Tma:  TM1275
  Mtu:  Rv0268c Rv1247c Rv2865 Rv3357
  MtC:  MT0281 MT3465
  Spn:  SP1741
  Sau:  SA2196 SA2246
  Syn:  ssr0761 ssr2754 ssr3571
  Nos:  all0172 asl3974
  Eco:  yafN yefM
  EcZ:  ZyafN
  Ecs:  ECs0259
  Sty:  STM1551 STM3559
  Vch:  VCA0422 VCA0445 VCA0477 VCA0488
  Atu:  AGc3659
  Rco:  RC0121 RC0290
_______

[Q] COG2162 Arylamine N-acetyltransferase
  Mtu:  Rv3566c
  MtC:  MT3671
  Sau:  SA2490
  Bsu:  BS_yvcN
  Bha:  BH2181
  Eco:  nhoA
  EcZ:  Z2249 Z2250
  Ecs:  ECs2066
  Sty:  STM1582
  Pae:  PA4827
  Mlo:  mll5814 mlr4870
  Ccr:  CC1563
_______

[J] COG2163 Ribosomal protein L14E/L6E/L27E
  Mth:  MTH31
  Mja:  MJ0657
  Mka:  MK0833
  Pho:  PH1265a
  Pab:  PAB7290
  Pya:  PAE0862
  Sso:  SSO5763
  Ape:  APE0976
  Sce:  YDR471w YHL001w YHR010w YKL006w YLR448w YML073c
  Spo:  SPAC1805.13 SPBC685.07c SPCC622.18 SPCC74.05
  Ecu:  ECU04g0330 ECU08g1780
  Cac:  CAC3110
  Bha:  BH0157
_______

[S] COG2164 Uncharacterized conserved protein
  Afu:  AF2241
  Mth:  MTH819
  Tma:  TM1367
_______

[NU] COG2165 Type II secretory pathway, pseudopilin PulG
  Aae:  aq_1432 aq_2118 aq_418
  Tma:  TM1271
  Fnu:  FN2093
  Dra:  DR0546 DR0548 DR1232 DR1233
  Cac:  CAC0989 CAC2102 CAC2103
  Lla:  L169515 L169783
  Spy:  SPy0104 SPy0105
  Spn:  SP2049 SP2050
  Sau:  SA1371
  Lin:  lin1380 lin1381
  Bsu:  BS_comGD
  Bha:  BH2825
  Syn:  sll1694 sll1695 slr1456 slr1929 slr1930 slr2016
  Nos:  all0563 all1765 all1769 all1771
  Eco:  gspI hofG hofH ppdA
  EcZ:  ZppdA
  Ecs:  ECs3683
  Ype:  YPO0811 YPO0812 YPO0813 YPO1014a
  Sty:  STM3000
  Vch:  VC0408 VC0409 VC0410 VC0411 VC0502 VC0828 VC2728
        VC2729 VC2730
  Pae:  PA0678 PA0680 PA0681 PA2672 PA2674 PA2675 PA3099
        PA3100 PA3101
  Hin:  HI0938
  Pmu:  PM0965
  Xfa:  XF1519 XF1521
  Rso:  RSc2300 RSc2301 RSc2302 RSc2310 RSc3106 RSc3107 RSc3108
        RSp0140 RSp0141 RSp0142 RSp0150 RSp0468 RSp0469 RSp0470
        RSp0471
  Cje:  Cj0683 Cj1343c
  Mlo:  mll6827
  Ccr:  CC0176 CC0178
  Ctr:  CT569
  Cpn:  CPn0818
_______

[R] COG2166 SufE protein probably involved in Fe-S center assembly
  Dra:  DR0216
  Mtu:  Rv3284
  MtC:  MT3383
  Syn:  slr1419
  Nos:  alr3513
  Eco:  ygdK ynhA
  EcZ:  ZygdK ZynhA
  Ecs:  ECs2386 ECs3671
  Ype:  YPO1027 YPO2399
  Sty:  STM1374 STM2985
  Vch:  VC2310
  Pae:  PA3668
  Hin:  HI1293
  Pmu:  PM0883
  Xfa:  XF0994
  Atu:  AGc1673
  Sme:  SMc00118
  Bme:  BMEI1359
  Mlo:  mll7646
  Ccr:  CC1061
  Ctr:  CT325
  Cpn:  CPn0071
_______

[J] COG2167 Ribosomal protein L39E
  Afu:  AF2067
  Hbs:  VNG2469G
  Mac:  MA4114
  Mth:  MTH1613
  Mja:  MJ0689
  Mka:  MK1618
  Tac:  Ta0053
  Tvo:  TVN0009
  Pho:  PH0529b
  Pab:  PAB3384
  Sso:  SSO5672
  Ape:  APE1087a
  Sce:  YJL189w
  Spo:  SPCC663.04
  Ecu:  ECU09g0395
_______

[P] COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur
  Mth:  MTH1360
  Tma:  TM0979
  Eco:  yheL
  EcZ:  ZyheL
  Ecs:  ECs4194
  Ype:  YPO0199
  Sty:  STM3449
  Buc:  BU530
  Vch:  VC0358
  Pae:  PA2607
  Hin:  HI0577
  Pmu:  PM1353
_______

[F] COG2169 Adenosine deaminase
  Mtu:  Rv1317c_1
  MtC:  MT1358_1
  Lla:  L0149
  Lin:  lin0068_1 lin2345
  Bsu:  BS_adaA
  Bha:  BH0394
  Eco:  ada_1
  EcZ:  Zada_1
  Ecs:  ECs3102_1
  Ype:  YPO0072_1
  Sty:  STM2265_1
  Vch:  VCA1018_1
  Pae:  PA2118_1 PA3596_1
  Rso:  RSc2505_1 RSc2570_1
  Atu:  AGc1643_1
  Sme:  SMc01728_1
  Bme:  BMEI1558_1 BMEII0405_1
  Mlo:  mlr1858_1
  Ccr:  CC0709_1
  Rco:  RC0868_1 RC0869
_______

[S] COG2170 Uncharacterized conserved protein
  Hbs:  VNG1397C
  Cgl:  Cgl2679
  Mtu:  Rv0433
  MtC:  MT0448
  Syn:  slr0990
  Nos:  alr3351
  Eco:  ybdK
  EcZ:  ZybdK
  Ecs:  ECs0619
  Sty:  STM0583
  Pae:  PA2181
  Rso:  RSc3298
_______

[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase
  Mka:  MK0435
  Tma:  TM1519
  Cac:  CAC2381
  Cgl:  Cgl1082 Cgl1084
  Mtu:  Rv1201c
  MtC:  MT1239
  Mle:  ML1058
  Lla:  L79267
  Spn:  SP2097
  Sau:  SA1229
  Lin:  lin1010
  Bsu:  BS_ykuQ
  Bha:  BH2669
  Eco:  dapD
  EcZ:  ZdapD
  Ecs:  ECs0168
  Ype:  YPO1041
  Sty:  STM0213
  Buc:  BU229
  Vch:  VC2329
  Pae:  PA3666
  Hin:  HI1634
  Pmu:  PM0658
  Xfa:  XF0114
  Nme:  NMB0335
  NmA:  NMA2153
  Rso:  RSc1393
  Hpy:  HP0626
  jHp:  jhp0570
  Cje:  Cj1605c
  Atu:  AGc648
  Sme:  SMc01732
  Bme:  BMEII0270
  Mlo:  mlr4843
  Ccr:  CC0281
  Rpr:  RP194
  Rco:  RC0243
_______

[T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase)
  Tma:  TM0733 TM1354_2
  Dra:  DRB0026 DRB0027_1 DRB0028_1
  Cac:  CAC2307
  Mtu:  Rv1364c_3 Rv3287c
  MtC:  MT1410_3 MT3386
  Sau:  SA1870
  Lin:  lin0890 lin0893
  Bsu:  BS_rsbT BS_rsbW BS_spoIIAB
  Bha:  BH0525 BH0528 BH1537
  Syn:  sll1968 slr1861
  Nos:  all1702 all2284 alr3423 alr3655 alr3760
  Ctr:  CT549
  Cpn:  CPn0670
_______

[M] COG2173 D-alanyl-D-alanine dipeptidase
  Mtu:  Rv0838
  MtC:  MT0860
  Syn:  slr1679
  Nos:  all4116
  Eco:  ddpX
  EcZ:  Z2222
  Ecs:  ECs2092
  Sty:  STM1599
  Mlo:  mlr1665
  Ccr:  CC2273
_______

[J] COG2174 Ribosomal protein L34E
  Mth:  MTH29
  Mja:  MJ0655
  Mka:  MK0023
  Pho:  PHS035
  Pab:  PAB7289
  Pya:  PAE3224
  Sso:  SSO6374
  Ape:  APE0978a
  Sce:  YER056c-a YIL052c
  Spo:  SPAC23A1.08c SPCC1322.15
  Ecu:  ECU03g0710
_______

[Q] COG2175 Probable taurine catabolism dioxygenase
  Sce:  YHL021c YLL057c
  Spo:  SPCC576.01c
  Mtu:  Rv0097 Rv3406
  MtC:  MT0106 MT3514
  Mle:  ML1992
  Eco:  tauD
  EcZ:  ZtauD
  Ecs:  ECs0422
  Ype:  YPO0185
  Vch:  VC1944 VC1949_2
  Pae:  PA0187 PA0193 PA0194 PA2255 PA2310 PA3935
  Rso:  RSc0746
  Mlo:  mll1440 mll5998 mlr6056
_______

[L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
  Tma:  TM0576
  Fnu:  FN0281
  Cac:  CAC3442
  Lla:  L0278
  Spy:  SPy1961
  Spn:  SP0274
  Sau:  SA1107
  Lin:  lin1357
  Bsu:  BS_polC
  Bha:  BH2418
  Uur:  UU377
  Mpu:  MYPU_6750
  Mpn:  MPN034
  Mge:  MG031
_______

[D] COG2177 Cell division protein
  Fnu:  FN0265
  Dra:  DR1550_2
  Cac:  CAC0498 CAC2661
  Cgl:  Cgl0780
  Mtu:  Rv3101c
  MtC:  MT3185
  Mle:  ML0670
  Lla:  L2
  Spy:  SPy0645
  Spn:  SP0757
  Lin:  lin2649
  Bsu:  BS_ftsX
  Bha:  BH3601
  Nos:  all1757
  Eco:  ftsX
  EcZ:  ZftsX
  Ecs:  ECs4311
  Ype:  YPO3812
  Sty:  STM3569
  Vch:  VC0149
  Pae:  PA0375
  Hin:  HI0770
  Pmu:  PM1521
  Xfa:  XF2694
  Nme:  NMB0008
  NmA:  NMA0255
  Atu:  AGl2438
  Sme:  SMc00716
  Bme:  BMEI0073
  Mlo:  mlr3523
  Ccr:  CC2217
_______

[J] COG2178 Predicted RNA-binding protein of the translin family
  Afu:  AF2260
  Mac:  MA0091
  Mja:  MJ0175
  Mka:  MK0443
  Pho:  PH0663
  Pab:  PAB2425
  Pya:  PAE1523
  Sso:  SSO0646
  Ape:  APE2424
  Spo:  SPCC736.09c
_______

[R] COG2179 Predicted hydrolase of the HAD superfamily
  Tma:  TM0171
  Dra:  DR1965
  Lla:  L86471
  Spy:  SPy0305
  Spn:  SP1750
  Sau:  SA1426
  Lin:  lin1527
  Bsu:  BS_yqeG
  Bha:  BH1322
  Syn:  slr0362
  Nos:  alr3102 alr3507
_______

[C] COG2180 Nitrate reductase delta subunit
  Afu:  AF0173
  Pya:  PAE3610
  Ape:  APE1300
  Cgl:  Cgl1161
  Mtu:  Rv1163 Rv1736c_2
  MtC:  MT1200 MT1778_2
  Sau:  SA2183
  Bsu:  BS_narJ
  Eco:  narJ narW
  EcZ:  ZnarJ ZnarW
  Ecs:  ECs1731 ECs2069
  Sty:  STM1579 STM1762
  Pae:  PA3873
  Rso:  RSp0976
  Bme:  BMEII0952
_______

[C] COG2181 Nitrate reductase gamma subunit
  Afu:  AF0501 AF0545 AF0546
  Pya:  PAE2614
  Cgl:  Cgl1160
  Mtu:  Rv1164 Rv1736c_3
  MtC:  MT1201 MT1778_3
  Sau:  SA2182
  Bsu:  BS_narI
  Eco:  narI narV
  EcZ:  ZnarI ZnarV
  Ecs:  ECs1732 ECs2068
  Sty:  STM1580 STM1761
  Pae:  PA3872
  Rso:  RSp0977
  Bme:  BMEII0953
_______

[G] COG2182 Maltose-binding periplasmic proteins/domains
  Tac:  Ta0126
  Pho:  PH0206
  Pab:  PAB0119 PAB2439
  Pya:  PAE3455
  Sso:  SSO1171
  Ape:  APE2254
  Tma:  TM0418 TM1204 TM1839
  Dra:  DR0561
  Lla:  L128695
  Spy:  SPy1294 SPy1306
  Spn:  SP2108
  Sau:  SA0207
  Lin:  lin2230
  Bsu:  BS_yvdG BS_yvfK
  Bha:  BH2019 BH2926
  Eco:  malE
  EcZ:  ZmalE
  Ecs:  ECs5017
  Ype:  YPO0856 YPO3714
  Sty:  STM4229
  Vch:  VCA0945
  Atu:  AGl1296
_______

[K] COG2183 Transcriptional accessory protein
  Sce:  YGR116w
  Spo:  SPAC1F7.01c
  Ecu:  ECU07g1690
  Fnu:  FN0065
  Cac:  CAC2842
  Cgl:  Cgl1995
  Lla:  L84502
  Spy:  SPy0580
  Spn:  SP0908
  Sau:  SA1868
  Lin:  lin0897
  Bsu:  BS_ydcI
  Bha:  BH0531
  Nos:  alr5249
  Eco:  yhgF
  EcZ:  ZyhgF
  Ecs:  ECs4249
  Ype:  YPO0134
  Sty:  STM3504
  Vch:  VC2716
  Pae:  PA5201
  Hin:  HI0568
  Pmu:  PM1448
  Xfa:  XF2165
  Nme:  NMB0075
  NmA:  NMA0194
  Rso:  RSc1623
  Atu:  AGc1153
  Sme:  SMc02644
  Bme:  BMEII0392
  Mlo:  mll2881
  Tpa:  TP0924
  Uur:  UU029
_______

[D] COG2184 Protein involved in cell division
  Mtu:  Rv3641c
  MtC:  MT3743
  Spn:  SP0571
  Eco:  fic
  EcZ:  Zfic
  Ecs:  ECs4212
  Sty:  STM3470
  Pae:  PA1366
  Hin:  HI0977
  Xfa:  XF1657
  Nme:  NMB0255
  NmA:  NMA0004
  Hpy:  HP1159
  jHp:  jhp1086
  Atu:  AGpTbx97
  Sme:  SMc02710
  Mlo:  mll2066
_______

[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
  Afu:  AF1288b AF2219
  Hbs:  VNG0673G VNG2286G
  Tac:  Ta0463
  Tvo:  TVN0773
  Pho:  PH0275
  Pab:  PAB2187
  Sso:  SSO2266
  Ape:  APE1686
  Fnu:  FN1853
  Dra:  DR1084_2 DR2032
  Cgl:  Cgl1492_2 Cgl1493_2
  Mtu:  Rv1492_2 Rv1493_2
  MtC:  MT1539_2 MT1540_2
  Mle:  ML1799_2 ML1800_2
  Bha:  BH2955_2 BH2956_2 BH3796_1
  Eco:  sbm_2
  EcZ:  Z0895 Zsbm_2
  Ecs:  ECs0764 ECs3787_2
  Rso:  RSc0237_1
  Atu:  AGl2498_2
  Sme:  SMb20757_2
  Bme:  BMEI0799_2
  Mlo:  mll7619_2
  Ccr:  CC2374_2 CC3081_2
_______

[K] COG2186 Transcriptional regulators
  Dra:  DR1905
  Cac:  CAC2546 CAC3603
  Cgl:  Cgl1676 Cgl2354_2 Cgl2475 Cgl2598 Cgl2852
  Mtu:  Rv0494 Rv0586 Rv3060c
  MtC:  MT0514 MT0615 MT3146
  Mle:  ML1188
  Lin:  lin0947
  Bsu:  BS_ycbG BS_yvfI
  Bha:  BH1835 BH3167
  Eco:  b3694 exuR fadR glcC lldR nanR pdhR
        uxuR yidW yieP
  EcZ:  ZexuR ZfadR ZlldR ZpdhR ZuxuR ZyhcK ZyieP
  Ecs:  ECs0117 ECs1682 ECs3976 ECs4099 ECs4482 ECs4697 ECs5283
  Ype:  YPO0010 YPO0576 YPO1279 YPO2144 YPO3420
  Sty:  STM0151 STM1541 STM1805 STM3084 STM3340 STM3693 STM3830
        STM3888 STM4507
  Vch:  VC1900 VC2415
  Pae:  PA0120 PA1627 PA4769 PA5356
  Hin:  HI0054 HI0426
  Pmu:  PM0048 PM1764
  Nme:  NMB1711
  NmA:  NMA1965
  Rso:  RSc1078 RSc2102
  Atu:  AGc1182 AGc3288 AGc464 AGc4967 AGc5113 AGl1334 AGl2076
        AGl2736 AGl3126 AGl3177 AGl326 AGl3267 AGl3331 AGl518
        AGpA108
  Sme:  SMa0063 SMa0246 SMa1349 SMa1442 SMb20106 SMb20148 SMb20294
        SMb20375 SMb20392 SMb20441 SMb20480 SMb20509 SMb20664 SMb21350
        SMb21591 SMc00241 SMc00829 SMc01975 SMc04143
  Bme:  BMEI1373 BMEII0071 BMEII0352 BMEII0858 BMEII1066
  Mlo:  mll0857 mll1686 mll1690 mll6865 mll6911 mll7079 mll7194
        mll7378 mll8575 mlr3366 mlr7008
  Ccr:  CC0783 CC0986 CC1420 CC2813
_______

[S] COG2187 Uncharacterized protein conserved in bacteria
  Aae:  aq_288
  Mtu:  Rv2004c_1
  MtC:  MT2060_1
  Syn:  slr0207_1
  Nos:  alr4787_1
  Pae:  PA4701_1
  Mlo:  mll6593_1
  Ccr:  CC0920_1
_______

[K] COG2188 Transcriptional regulators
  Dra:  DR0265 DRA0211
  Cac:  CAC0189 CAC2851_1 CAC3502 CAP0006
  Cgl:  Cgl0157 Cgl2832
  Mtu:  Rv0792c
  MtC:  MT0817_2
  Lla:  L0150 L0151 L75633_1
  Spy:  SPy0715 SPy1202 SPy1259_1 SPy1870 SPy2099
  Spn:  SP0058 SP1446 SP1885 SP2020
  Sau:  SA0130 SA0254 SA0434 SA1120
  Lin:  lin0019 lin0390 lin0584 lin0901 lin0957 lin1221 lin2111
        lin2112
  Bsu:  BS_treR BS_ybgA BS_ydhQ BS_ymfC BS_yurK BS_yvoA BS_yydK
  Bha:  BH0419 BH0873 BH0914 BH2394 BH3323 BH3917
  Nos:  alr2226
  Eco:  farR phnF yegW yhfR yidP yihL
  EcZ:  Z4874 ZphnF ZyegW ZyhfR ZyidP ZyihL
  Ecs:  ECs2904 ECs4225 ECs4349 ECs4624 ECs4794 ECs5085
  Ype:  YPO1890 YPO1973 YPO3456
  Sty:  STM0430 STM0789 STM2145 STM3602 STM3785 STM4068
  Vch:  VC1206 VCA0600
  Pae:  PA1142 PA2299 PA2802 PA3249 PA3381 PA3757 PA5105
  Rso:  RSc1997 RSc2648 RSp0079 RSp0336 RSp1506
  Atu:  AGc262 AGc306 AGc4722 AGl1354GM AGl2068 AGl3074
  Sme:  SMa0402 SMa2215 SMa2227 SMb20048 SMb20758 SMb21464 SMc00674
        SMc02340 SMc02876 SMc03140
  Bme:  BMEI0881 BMEII0116 BMEII0370 BMEII0383 BMEII0757
  Mlo:  mll1745 mll3341 mll4768 mll8317 mlr7110 mlr9157
  Ccr:  CC0445 CC0536 CC0962
  Uur:  UU067
  Mpu:  MYPU_6430
_______

[L] COG2189 Adenine specific DNA methylase Mod
  Afu:  AF1409
  Tvo:  TVN0124 TVN0125 TVN1464 TVN1476
  Fnu:  FN0416
  Cgl:  Cgl0878
  Spn:  SP1431
  Lin:  pli0029
  Sty:  STM0357
  Hin:  HI1056 HI1058
  Pmu:  PM0698
  Xfa:  XF1968
  NmA:  NMA1589 NMA1590
  Hpy:  HP0260 HP0593 HP1369m
  jHp:  jhp0045 jhp0244 jhp1284 jhp1296 jhp1411
  Atu:  AGl1997 AGl1998
  Mlo:  mll9056
  Uur:  UU477 UU478
  Mpu:  MYPU_3960 MYPU_3970 MYPU_3980 MYPU_4800
_______

[G] COG2190 Phosphotransferase system IIA components
  Fnu:  FN0915
  Cac:  CAC0423_3 CAC0570_3 CAC1354 CAC1407_3 CAC2995 CAC3427
  Cgl:  Cgl1324_3 Cgl2590_3
  Lla:  L146642 L37338 L90678_3
  Spy:  SPy0572_3 SPy1815_3 SPy1986_3 SPy2097_3
  Spn:  SP0577_3 SP0758_3 SP1722_3 SP1884_3
  Sau:  SA0183_3 SA0255_2 SA1255 SA2326_3
  Lin:  lin0026_3 lin1016
  Bsu:  BS_bglP_3 BS_ptsG_3 BS_ybfS_3 BS_ypqE BS_yyzE
  Bha:  BH0296_3 BH0595_3 BH0844_3 BH1515
  Eco:  bglF_3 crr nagE_3
  EcZ:  Zcrr ZnagE_3
  Ecs:  ECs0709_3 ECs3289
  Ype:  YPO2628_3 YPO2995
  Sty:  STM0685_3 STM2433
  Buc:  BU063
  Vch:  VC0964
  Pae:  PA3760_1
  Hin:  HI1711
  Pmu:  PM0896
  Rso:  RSp1282_1
  Ccr:  CC0448_1 CC0537_1
  Bbu:  BB0559
  Mpu:  MYPU_0170_3
  Mpn:  MPN207_3
  Mge:  MG069_3
_______

[C] COG2191 Formylmethanofuran dehydrogenase subunit E
  Afu:  AF0177 AF0433_2
  Mac:  MA0304 MA0381 MA4602
  Mth:  MTH1345 MTH917
  Tac:  Ta1109
  Tvo:  TVN0676
  Pho:  PH1238
  Pab:  PAB0675
  Dra:  DRA0267
_______

[O] COG2192 Predicted carbamoyl transferase, NodU family
  Mja:  MJ1051 MJ1058
  Mka:  MK0097
  Pho:  PH1253
  Pab:  PAB1612
  Dra:  DRC0037
  Syn:  sll1178
  Pae:  PA2069 PA5005
  Rso:  RSp0788 RSp1487 RSp1491
  Sme:  SMb20472
  Mlo:  mlr6171
_______

[P] COG2193 Bacterioferritin (cytochrome b1)
  Mtu:  Rv1876
  MtC:  MT1925
  Mle:  ML2038
  Syn:  sll1341 slr1890
  Nos:  all3940
  Eco:  bfr
  EcZ:  Z4695
  Ecs:  ECs4189
  Ype:  YPO0206
  Sty:  STM3443
  Vch:  VC0365
  Pae:  PA3531 PA4235 PA4880
  Xfa:  XF0395
  Nme:  NMB1206 NMB1207
  NmA:  NMA1376 NMA1377
  Rso:  RSc0350
  Atu:  AGc5028
  Sme:  SMc03786
  Bme:  BMEII0704
  Mlo:  mlr5526
  Ccr:  CC3262
_______

[R] COG2194 Predicted membrane-associated, metal-dependent hydrolase
  Eco:  ybiP yhbX yhjW yijP yjdB yjgX
  EcZ:  Z1140 Z1579 ZybiP ZyhbX ZyhjW ZyijP ZyjdB
  Ecs:  ECs0893 ECs1317 ECs4053 ECs4425 ECs4884 ECs5096
  Ype:  YPO2377 YPO4013
  Sty:  STM0834 STM3635 STM4118 STM4293
  Vch:  VCA1102
  Pae:  PA1972 PA3310 PA4517
  Hin:  HI1005 HI1064
  Pmu:  PM0223 PM1042
  Xfa:  XF0375
  Nme:  NMB1638 NMB2010
  NmA:  NMA0431 NMA1892
  Hpy:  HP0022 HP1417m
  jHp:  jhp0020 jhp1312
  Cje:  Cj0256
  Atu:  AGl1668
  Sme:  SMb21211
  Bme:  BMEI0118
  Rpr:  RP329
  Rco:  RC0454
_______

[E] COG2195 Di- and tripeptidases
  Mac:  MA2653
  Fnu:  FN0733 FN1277 FN1408 FN1804
  Dra:  DR2239
  Cac:  CAC0476
  Lla:  L60596
  Spy:  SPy0799
  Spn:  SP1008
  Sau:  SA0698 SA1343
  Lin:  lin1412 lin1892
  Bsu:  BS_pepT BS_yqjE
  Bha:  BH1469
  Eco:  pepD pepT
  EcZ:  ZpepD ZpepT
  Ecs:  ECs0264 ECs1572
  Ype:  YPO1009 YPO1631 YPO3230
  Sty:  STM0316 STM1227
  Vch:  VC1343 VC2279 VCA0180
  Hin:  HI0675 HI1348
  Pmu:  PM0265 PM1368
  Cje:  Cj0980
  Sme:  SMb21042
  Ccr:  CC3032
  Bbu:  BB0608
_______

[TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
  Dra:  DR0432 DR0891 DR0987 DR1558 DRA0010 DRB0081
  Cac:  CAC0174 CAC0240 CAC0865 CAC1455 CAC2254 CAC2939 CAC3429
  Cgl:  Cgl0595 Cgl0925 Cgl1963 Cgl2707 Cgl2870
  Mtu:  Rv0195 Rv0844c Rv3133c
  MtC:  MT0205 MT0866 MT3219
  Lla:  L0127
  Spy:  SPy1621 SPy1908
  Spn:  SP0387 SP2000
  Sau:  SA1159 SA1666 SA1700 SA2179
  Lin:  lin1021 lin2659
  Bsu:  BS_comA BS_degU BS_ydfI BS_yfiK BS_yhcZ BS_yocG BS_yvfU
        BS_yvqC BS_yxjL
  Bha:  BH0581 BH1051 BH1200 BH2097 BH2123 BH2213 BH3628
  Syn:  sll0782_2 sll0921 sll1544 sll1592 sll1708 slr0312 slr1783
        slr1909
  Nos:  all1704 all1736 all3348 all3660 all4635 all5069 alr0356
        alr0913 alr2138 alr3156 alr3768 alr5150 alr7219 alr7652
        alr8531 alr8535 alr9013
  Eco:  bglJ evgA fimZ narL narP rcsB uhpA
        uvrY ygeK ygeL yhjB yjjQ
  EcZ:  Z0463 Z4176 ZbglJ ZevgA ZfimZ ZnarL ZnarP
        ZrcsB ZuhpA ZuvrY ZyhjB ZyjjQ
  Ecs:  ECs0418 ECs0597 ECs1726 ECs2652 ECs3082 ECs3106 ECs3248
        ECs3712 ECs4400 ECs4606 ECs5325 ECs5326
  Ype:  YPO0255 YPO1218 YPO1576 YPO1865 YPO1925 YPO3041 YPO4012
  Sty:  STM0549 STM1391 STM1767 STM1947 STM2246 STM2270 STM3606
        STM3790 STM4547 STM4548
  Vch:  VC1213 VC1277 VC1652_3 VC2702 VCA0682
  Pae:  PA0034 PA0601 PA1347 PA1397 PA1978 PA1980 PA2376
        PA2586 PA2899 PA3045 PA3604 PA3714 PA3879 PA3948
        PA4080 PA4296
  Hin:  HI0726
  Pmu:  PM1340 PM1810
  Xfa:  XF0972 XF2608
  Nme:  NMB1250
  NmA:  NMA1419
  Rso:  RSc0192 RSc0292 RSc1185 RSc2312 RSc2455 RSc3078 RSc3161
        RSc3388 RSp0285 RSp0338 RSp0381 RSp0980 RSp1621
  Atu:  AGc859 AGl157 AGl1633 AGl173 AGl3006 AGpA383 AGpT2_2
  Sme:  SMa0206 SMa1550 SMb20078 SMb20162 SMb20468 SMb21080 SMb21520
        SMc02248 SMc03150
  Bme:  BMEI1582 BMEI1607 BMEI1751 BMEII0853
  Mlo:  mll1133 mll4567 mll4697 mll6762 mlr1320 mlr5684 mlr6543
        mlr9663
  Ccr:  CC1150
_______

[T] COG2198 FOG: HPt domain
  Sce:  YDL235c
  Spo:  SPBC725.02
  Syn:  sll0043_1 sll1905_6 slr0073_1 slr1759_7 slr2098_6 slr2104_5
  Nos:  all2875_6 all5174_2 alr2279_5 alr2428_2 alr3761_7
  Eco:  arcB_3 barA_4 evgS_4 torS_3 yojN_2
  EcZ:  ZarcB_3 ZbarA_4 ZevgS_4 ZtorS_3 ZyojN_2
  Ecs:  ECs1148_3 ECs3105_2 ECs3249_4 ECs3646_4 ECs4089_3
  Ype:  YPO3381_4 YPO3555_3
  Sty:  STM2269_2 STM2958_4 STM3328_3 STM3826_3
  Vch:  VC1080 VC1349_5 VC1653_4 VC2038_2 VC2369_3 VC2453_4 VCA0709_3
  Pae:  PA0033 PA0928_4 PA0991 PA3044_5 PA3345 PA3946_5 PA4112_5
  Hin:  HI0219a_2 HI1651
  Pmu:  PM0313_3
  Mlo:  mll6695
_______

[T] COG2199 FOG: GGDEF domain
  Aae:  aq_027_2 aq_035_2 aq_1151_4 aq_1442_5 aq_1455 aq_2027_2 aq_265_2
        aq_367_2 aq_429 aq_563_2 aq_689_2
  Tma:  TM0107 TM0471 TM0972_2 TM1163_2 TM1184_2 TM1588 TM1594_2
        TM1788 TM1830
  Dra:  DR0267 DR0466_2 DR0605 DR0750_2 DR0981 DR1090 DR1629_2
        DR1633_2 DR2299_1 DR2498 DRA0181 DRA0297_2 DRA0342_3 DRB0034
        DRB0044_2 DRB0093
  Cac:  CAC0631_1 CAC0636_2 CAC0818 CAC1566 CAC1568 CAC2577_2 CAC2587_2
        CAC2623_2 CAC2702_3 CAC3019_1 CAC3544
  Cgl:  Cgl1011_3
  Mtu:  Rv1354c_2
  MtC:  MT1397_2
  Mle:  ML0397_2 ML1419_2 ML1750_2
  Sau:  SA0701
  Lin:  lin0535 lin2025 lin2026 lin2277
  Bsu:  BS_ydaK BS_yhcK_2 BS_ykoWm_3 BS_ytrP_2
  Bha:  BH2971_1 BH3036
  Syn:  sll0048_2 sll0267_5 sll0779_2 sll0821_3 sll0821_7 sll1170_3 sll1673_3
        sll1687_3 sll1895_2 slr0302_3 slr0359_3 slr0687_3 slr0829_3 slr1047_3
        slr1102_3 slr1103_2 slr1104_2 slr1143_2 slr1305_3 slr1657 slr1798_2
        slr2077_2
  Nos:  all0219_2 all1012_3 all1175_3 all1219_3 all2416 all4225_1 all4896_3
        all4897_3 all5174_3 alr3170_2 alr3504
  Eco:  yaiC_2 ycdT_2 yciR_2 ydaM_3 yddU_2 yddV_2 ydeH_2
        yeaI_2 yeaJ_2 yeaP_2 yedQ_2 yegE_3 yfeA_2 yfgF_2
        yfiN_2 yhdA_2 yhjK_2 yliF_2 yneF_2
  EcZ:  Z1058_2 Z2182_2 Z2219_2 Z2221m_2 Z2421_3 Z2836m_2 Z3047_2
        Z3235m_3 Z3766_2 ZyaiC_2 ZycdT_2 ZyciR_2 ZydeH_2 ZyeaI_2
        ZyeaJ_2 ZyfeA_2 ZyfiN_2 ZyhdA_2 ZyhjK_2
  Ecs:  ECs0435_2 ECs0913_2 ECs1271_2 ECs1858_2 ECs1925_3 ECs2093_1 ECs2094_2
        ECs2095_2 ECs2129_2 ECs2144_2 ECs2494_2 ECs2495_2 ECs2503_2 ECs2694_2
        ECs2876_2 ECs3273_2 ECs3365_2 ECs3467_2 ECs4124_2 ECs4409_2
  Ype:  YPO0425 YPO0449_2 YPO0998_3 YPO3664_2 YPO3996_2
  Sty:  STM0385_2 STM1283_2 STM1703_2 STM1987_2 STM2123_3 STM2410_2 STM2503_2
        STM2672_2 STM3375_2 STM3388_2 STM3615_2 STM4551
  Vch:  VC0072_2 VC0130_2 VC0398_2 VC0653_2 VC0658_2 VC0703_2 VC0900_2
        VC1029 VC1067_2 VC1104 VC1185 VC1216_2 VC1353_2 VC1367_2
        VC1370 VC1372 VC1376_2 VC1593 VC1599 VC1934_1 VC2224_2
        VC2285_2 VC2370_2 VC2454_2 VC2697 VC2750_3 VCA0049 VCA0074
        VCA0080_2 VCA0165_2 VCA0217 VCA0557_2 VCA0560 VCA0697_3 VCA0785_2
        VCA0848 VCA0939_2 VCA0956 VCA0960_2 VCA0965 VCA1082_2
  Pae:  PA0169 PA0285_2 PA0290_2 PA0338_2 PA0575_3 PA0847_4 PA0861_2
        PA1107 PA1120_2 PA1181_3 PA1433_2 PA1727_2 PA1851 PA2072_3
        PA2567_2 PA2771_2 PA2870 PA3177 PA3258_3 PA3311_2 PA3343
        PA4332 PA4367_2 PA4601_2 PA4929_2 PA4959_3 PA5017_4 PA5295_1
        PA5442_2 PA5487
  Xfa:  XF0401_2 XF0986_2 XF2624_2
  Rso:  RSc0375_3 RSc0510_2 RSc0588_4 RSc1893 RSc2432_2 RSc3143 RSp0012_3
        RSp0132 RSp0253_3 RSp0254_3 RSp0281 RSp0334_2 RSp0380_2 RSp0398_2
        RSp0400_2 RSp0519 RSp0813_1 RSp1097_1 RSp1155_4 RSp1203_2 RSp1208_1
        RSp1524_2
  Atu:  AGc1266_1 AGc1434_2 AGc1510_3 AGc1815 AGc2058_2 AGc2062_1 AGc2073
        AGc2229 AGc2322 AGc3108 AGc3648 AGc3792 AGc3960 AGc4046_2
        AGc4051_1 AGc4876 AGl2138 AGl2664_1 AGl3140_1 AGl3210_2 AGl3214_2
        AGl3494_3 AGl374gl_2 AGl511_3 AGl758_1 AGpA538
  Sme:  SMa0137_2 SMa1548_2 SMa2301 SMb20389_2 SMb20447_1 SMb20523 SMb20900_3
        SMc00033_3 SMc00038_3 SMc00074_2 SMc00887_1 SMc00992_2 SMc01464 SMc03141_1
        SMc03178_3 SMc03942_2 SMc04015
  Bme:  BMEI0929 BMEI1453_2 BMEI1520 BMEI1731_2 BMEII0292 BMEII0317_2 BMEII0654
        BMEII1009_2
  Mlo:  mll0886 mll1446 mll1848_2 mll2240_2 mll2297_2 mll3440_3 mll3491_2
        mll4270 mll4271 mll4364_2 mll4839 mll5564_1 mll6708_1 mll7513_2
        mll7787_2 mll8296_1 mlr0754 mlr0825 mlr1609 mlr1828_1 mlr2027_3
        mlr2546_1 mlr3171_2 mlr3504_2 mlr4740_1 mlr5176_2 mlr5331_2 mlr5400_2
        mlr8123 mlr9186_1
  Ccr:  CC0091_2 CC0655_2 CC0740_1 CC0857_2 CC1850 CC3094_3 CC3285
        CC3396_1
  Tpa:  TP0172 TP0981_2
_______

[T] COG2200 FOG: EAL domain
  Aae:  aq_027_3 aq_083 aq_1151_5 aq_1442_6 aq_341 aq_367_3
  Dra:  DR0466_3 DR0750_3 DR1629_3 DR2299_2 DR2492
  Cac:  CAC0322 CAC0631_2 CAC2702_1 CAC3019_2
  Cgl:  Cgl1011_4
  Mtu:  Rv1354c_3 Rv1357c
  MtC:  MT1397_3 MT1400
  Mle:  ML1750_3 ML1752
  Lin:  lin0158 lin0178 lin2028
  Bsu:  BS_ykoWm_4 BS_ykuI_1
  Bha:  BH2277_1 BH2971_2
  Syn:  sll0267_6 sll0821_4 sll1895_3 slr0359_4 slr0842_2 slr1102_4 slr1103_3
        slr1104_3 slr1305_4 slr1588_2 slr1593 slr1692 slr2077_3
  Nos:  all0219_3 all1175_4 all4225_2 all4897_4 alr1230_2 alr2306_2 alr3170_3
  Eco:  rtn_2 yahA_2 ycgF_2 ycgG_2 yciR_3 yddU_3 ydiV
        yegE_4 yfeA_3 yfgF_3 yhdA_3 yhjH yhjK_3 yliE_2
        yoaD_2
  EcZ:  Z1057_2 Z1528_2 Z2221m_3 Z2736 Z2858_2 Z3235m_4 Z3766_3
        Zrtn_2 ZyahA_2 ZyciR_3 ZyfeA_3 ZyhdA_3 ZyhjH ZyhjK_3
  Ecs:  ECs0363_2 ECs0912_2 ECs1272_2 ECs1858_3 ECs2093_2 ECs2414 ECs2524_2
        ECs2876_3 ECs3068_2 ECs3273_3 ECs3365_3 ECs4124_3 ECs4405 ECs4409_3
  Ype:  YPO0998_4 YPO1274_2 YPO2779 YPO3664_3 YPO3988 YPO3996_3
  Sty:  PSLT032 STM0343_2 STM1344 STM1697 STM1703_3 STM1827_2 STM2123_4
        STM2215_2 STM2410_3 STM2503_3 STM3375_3 STM3388_3 STM3611 STM3615_3
  Vch:  VC0072_3 VC0130_3 VC0398_3 VC0653_3 VC0658_3 VC0703_3 VC1086_2
        VC1211_2 VC1592 VC1641 VC1652_2 VC1710_2 VC1934_2 VC2750_4
        VCA0080_3 VCA0101_2 VCA0536 VCA0785_3 VCA1083
  Pae:  PA0285_3 PA0575_4 PA0861_3 PA1181_4 PA1433_3 PA1727_3 PA2072_4
        PA2133 PA2567_3 PA2818_2 PA3258_1 PA3311_3 PA3825_2 PA3947_2
        PA4367_3 PA4601_3 PA4959_4 PA5017_5 PA5295_2 PA5442_3
  Xfa:  XF0401_3 XF2624_3
  Rso:  RSc0510_3 RSc0588_5 RSc1343 RSc3387_2 RSp0254_4 RSp0334_3 RSp0380_3
        RSp0813_2 RSp1051_1 RSp1097_2 RSp1155_5 RSp1208_2 RSp1623_2
  Atu:  AGc1266_2 AGc1434_3 AGc1510_1 AGc2062_2 AGc3995 AGc4046_3 AGc4051_2
        AGl2664_2 AGl3140_2 AGl3210_3 AGl374gl_3 AGl511_4 AGl758_2 AGpA529
  Sme:  SMa0137_3 SMa0369 SMa1548_3 SMb20447_2 SMb20900_4 SMb21517 SMc00033_1
        SMc00038_4 SMc00074_3 SMc00887_2 SMc00992_3 SMc03141_2 SMc03178_4 SMc03942_3
  Bme:  BMEI1453_3 BMEI1731_3 BMEII0317_3
  Mlo:  mll1848_3 mll2297_3 mll2537 mll2538 mll4364_3 mll5564_2 mll6708_2
        mll7513_3 mll7787_3 mll8296_2 mlr1828_2 mlr2027_4 mlr2546_2 mlr3171_3
        mlr3504_3 mlr4740_2 mlr5176_3 mlr9186_2
  Ccr:  CC0091_3 CC0655_3 CC0710 CC0740_2 CC0857_3 CC1086_2 CC3094_4
        CC3148 CC3396_2
  Rpr:  RP246_2
  Rco:  RC0330_2
  Bbu:  BB0363_2
_______

[NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
  Afu:  AF1041
  Hbs:  VNG0973G
  Mac:  MA0015 MA1989_1 MA3067 MA3542_1
  Pho:  PH0483
  Pab:  PAB1331
  Tma:  TM0408
  Cac:  CAC2222
  Bsu:  BS_cheB
  Bha:  BH2435
  Nos:  all1716_1 all1847
  Eco:  cheB
  EcZ:  ZcheB
  Ecs:  ECs2593
  Ype:  YPO1679
  Sty:  STM1917
  Vch:  VC1401 VC2062
  Pae:  PA0173 PA0414 PA1459 PA3703
  Xfa:  XF1951
  Rso:  RSp1403
  Cje:  Cj0924c
  Atu:  AGc916
  Sme:  SMa1561 SMb20514 SMb20515_1 SMc03010
  Mlo:  mll9510
  Ccr:  CC0436 CC0597
  Tpa:  TP0631
  Bbu:  BB0415 BB0568
_______

[T] COG2202 FOG: PAS/PAC domain
  Afu:  AF0021_1 AF0277_1 AF0410_1 AF0448_3 AF0450_1 AF0454_1 AF0579_1
        AF0770_1 AF0893_1 AF1034_1 AF1035_1 AF1036_1 AF1045_1 AF1184_1
        AF1452_1 AF1472_2 AF1483_2 AF1483_4 AF1515_1 AF1620_3 AF1639_1
        AF1766_2 AF2032_1 AF2109_1 AF2420_1
  Hbs:  VNG0160G_1 VNG0716G_1 VNG0736G_1 VNG0916G_1 VNG0958G_1 VNG1175G_1 VNG1374G_1
        VNG1464G_1 VNG1751H_2 VNG2037C_1 VNG2334C_2 VNG2334C_4 VNG6035G_2 VNG7030_2
  Mac:  MA0203_1 MA0203_3 MA0490_1 MA0551_1 MA0551_3 MA0552_1 MA0619_2
        MA0620_2 MA0758_1 MA0759_1 MA0863_2 MA0864 MA0970_1 MA0970_3
        MA1149_1 MA1267_2 MA1270_1 MA1270_3 MA1274_1 MA1322_1 MA1463_1
        MA1470_1 MA1627_1 MA1628_1 MA1628_3 MA1630_1 MA1630_3 MA1645_1
        MA1646_1 MA1646_3 MA1704_1 MA1716 MA1739_3 MA1800_1 MA1844_1
        MA1878_2 MA1957_1 MA1989_3 MA1991_1 MA2013_1 MA2082_1 MA2256_1
        MA2266_1 MA2266_3 MA2294_1 MA2397_1 MA2397_3 MA2555_3 MA2561_1
        MA2732_1 MA2757_1 MA2784_1 MA2890_1 MA2890_3 MA3346_1 MA3368_1
        MA3370_2 MA3405_2 MA3481_2 MA3542_3 MA3543_1 MA4026_1 MA4362_2
        MA4377_2 MA4561_1 MA4561_3
  Mth:  MTH174_2 MTH1764_2 MTH440_2 MTH446_2 MTH457_2 MTH458 MTH468_2
        MTH619_2 MTH786 MTH823_2 MTH902_2
  Spo:  SPAC1834.08_2 SPAC27E2.09_4 SPCC74.06_4
  Aae:  aq_027_1 aq_1115_2 aq_1151_2 aq_1442_2 aq_1442_4 aq_231_1 aq_340_2
        aq_340_4
  Tma:  TM1184_1 TM1359_3 TM1654_1
  Dra:  DR0466_1 DR0510 DR0750_1 DR1174_2 DR1227_1 DR2419_1
  Cac:  CAC0903_2
  Cgl:  Cgl0183 Cgl1011_2
  Mtu:  Rv1364c_1
  MtC:  MT1410_1
  Mle:  ML0397_1 ML1419_1
  Lin:  lin0792_1 lin1807_1
  Bsu:  BS_kinA_2 BS_kinC_1 BS_phoR_2 BS_resE_3 BS_ykoWm_2 BS_ykrQ_1 BS_ykrQ_2
        BS_ytvA_1 BS_yvfP_1
  Bha:  BH2949_2
  Syn:  sll0267_2 sll0267_4 sll0779_1 sll1003_1 sll1003_2 sll1124_2 sll1124_4
        sll1170_2 sll1473_2 sll1673_2 sll1687_1 sll1905_2 slr0222_2 slr0302_1
        slr0311_2 slr0359_2 slr0829_2 slr1102_2 slr1212_1 slr1305_2 slr1385_2
        slr1393_2 slr1759_2 slr2098_2 slr2104_2
  Nos:  all0182_1 all0219_1 all0542_2 all0729_3 all0729_5 all0824_1 all0978_1
        all1012_2 all1145_1 all1219_2 all1279_2 all1280_2 all1651_1 all1716_4
        all1804_2 all1846_2 all1904_2 all1914_2 all2035_1 all2094_2 all2095_2
        all2239_3 all2379_2 all2875_2 all2897_2 all3275_2 all3563_1 all3564_1
        all3767_1 all3985_1 all3987 all4097_2 all4896_1 all4897_2 all5173_1
        all5210_1 all5210_3 all5327_1 alr0428_1 alr0546_1 alr1229_2 alr1229_4
        alr1966_2 alr1968_2 alr2123_1 alr2137_2 alr2266_2 alr2279_1 alr2428_4
        alr2428_6 alr2481_1 alr2682_4 alr3092_1 alr3120_3 alr3170_1 alr3225_1
        alr3442_1 alr3761_3 alr4564_1 alr4716_1 alr5272_1
  Eco:  aer_1 atoS_2 yciR_1 ydaM_2 yddU_1 yegE_2
  EcZ:  Z2221m_1 Z2421_2 Z3235m_2 Zaer_1 ZyciR_1
  Ecs:  ECs1858_1 ECs1925_2 ECs2094_1 ECs2876_1 ECs3954_1
  Ype:  YPO0998_2 YPO1644_1 YPO2515_1
  Sty:  STM1703_1 STM2123_2 STM3217_1
  Vch:  VC0072_1 VC0098_1 VC0512_1 VC0622_3 VC0653_1 VC1349_2 VC1406_1
        VC1710_1 VC2370_1 VCA0190 VCA0658_1 VCA0697_2 VCA0864_1 VCA0939_1
        VCA0988_1 VCA1078_1 VCA1092_1
  Pae:  PA0285_1 PA0290_1 PA0338_1 PA0533_1 PA0575_2 PA0600_2 PA0847_3
        PA0861_1 PA1098_1 PA1181_2 PA1243_1 PA1243_3 PA1423_1 PA1561_1
        PA1930_1 PA1976_1 PA1992_1 PA2072_2 PA2177_1 PA3044_2 PA3271_2
        PA3946_2 PA4036_2 PA4112_2 PA4197_2 PA4293_1 PA4601_1 PA4959_2
        PA5017_3 PA5442_1
  Xfa:  XF0853_1 XF2624_1
  Rso:  RSc0191_1 RSc0375_2 RSc0588_1 RSc0588_3 RSc1075_2 RSc1598_1 RSc2311_1
        RSc3079_1 RSp0012_2 RSp0253_2 RSp0254_2 RSp0255_1 RSp0334_1 RSp0380_1
        RSp1051_2 RSp1100 RSp1155_1 RSp1155_3 RSp1203_1 RSp1224_1 RSp1676_1
  Cje:  Cj1110c_1 Cj1189c Cj1191c Cj1492c_1
  Atu:  AGc1094_1 AGc1264_1 AGc1434_1 AGc1799_1 AGc2521_1 AGc2863 AGc4237_1
        AGc44_1 AGc4747_1 AGc598_1 AGl1117_1 AGl1506 AGl1617_1 AGl2122
        AGl2920_1 AGl3214_1 AGl329_1 AGl3430_1 AGl374gl_1 AGl511_2 AGpA501
        AGpA542_1 AGpA543_1 AGpA755_1 AGpA788_1 AGpT246_1
  Sme:  SMa0113_1 SMa1142_1 SMa1229_1 SMa1548_1 SMb20515_3 SMb20868_2 SMb20900_2
        SMb20933_1 SMb20933_3 SMc00038_1 SMc00074_1 SMc00471_1 SMc00776_1 SMc00888_1
        SMc01128_1 SMc01507_2 SMc02369_1 SMc02756_1 SMc03087_1 SMc03178_2 SMc03942_1
  Bme:  BMEI0417_1 BMEI0947_1 BMEI1325_1 BMEI1453_1 BMEI1731_1 BMEI2027_1 BMEII0317_1
        BMEII0679_1
  Mlo:  mll0767_1 mll0984_2 mll0989_1 mll1798_1 mll1848_1 mll2240_1 mll3440_1
        mll3491_1 mll3725_1 mll5087_1 mll6540_1 mll6607_1 mll7513_1 mll7787_1
        mll8067_1 mll8067_3 mll9655_1 mlr2027_2 mlr3171_1 mlr3215_1 mlr3659_2
        mlr3690_2 mlr5176_1 mlr5331_1 mlr6689_1 mlr6761_1 mlr8084_1 mlr9591_1
        mlr9681_1
  Ccr:  CC0026_1 CC0285_1 CC0586_1 CC0652_1 CC0759_1 CC0836_1 CC1655_1
        CC2482_2 CC2670_2 CC2810_1 CC2874_1 CC2971_2 CC3048_1 CC3058_1
        CC3094_2 CC3170_1 CC3191_1 CC3225_1 CC3327_2 CC3349_1 CC3484_1
        CC3560_2
  Ctr:  CT467_1
  Cpn:  CPn0584_1
  Bbu:  BB0764_1
_______

[T] COG2203 FOG: GAF domain
  Afu:  AF0277_2 AF0448_2 AF1472_3 AF1483_3 AF2420_2
  Hbs:  VNG0160G_2 VNG0716G_2 VNG1175G_2 VNG1464G_2 VNG2334C_3 VNG2334C_5
  Mac:  MA0203_2 MA0551_2 MA0863_1 MA0863_3 MA0970_2 MA1270_2 MA1628_2
        MA1630_2 MA1646_2 MA1800_2 MA1878_1 MA2266_2 MA2397_2 MA2561_2
        MA2890_2 MA3370_1 MA4362_3 MA4561_2 MA4561_4
  Mth:  MTH1339 MTH1607_2 MTH1764_3
  Spo:  SPAC27E2.09_3 SPCC74.06_3
  Aae:  aq_1442_3 aq_340_3
  Tma:  TM1359_2
  Dra:  DR0039_1 DR0719_1 DRB0044_1
  Cac:  CAC0636_1
  Mtu:  Rv1354c_1 Rv2027c_1 Rv3132c_1
  MtC:  MT1397_1 MT2086_1 MT3218_1
  Mle:  ML1750_1
  Sau:  SA1667_1
  Bsu:  BS_yhcY_1
  Bha:  BH0536_1 BH2214_1
  Syn:  sll0041_2 sll0041_3 sll0048_1 sll0267_3 sll0782_1 sll0821_1 sll0821_2
        sll0821_6 sll1124_3 sll1228_1 sll1334_1 sll1473_1 sll1687_2 sll1888_1
        slr0302_2 slr0311_1 slr0484_2 slr0687_2 slr1047_2 slr1142 slr1143_1
        slr1147_1 slr1212_2 slr1385_1 slr1393_1 slr1759_3 slr1805_2 slr1969_2
        slr2104_1
  Nos:  all0323_3 all0330_2 all0542_1 all0729_2 all0729_4 all0729_6 all0825_1
        all0853_1 all0886_3 all0978_2 all1069_1 all1088_1 all1145_2 all1175_2
        all1191_1 all1280_1 all1280_3 all1625_3 all1688_1 all1703_2 all1804_3
        all1904_1 all2239_2 all2282_3 all2699_1 all2875_3 all3557_3 all3691_3
        all4261_1 all4687_3 all4896_2 all4963_2 all4978_1 all5074_1 all5210_2
        all5210_4 all7016_1 alr0354_3 alr0709_3 alr0710_3 alr0900_3 alr1121_2
        alr1229_3 alr1308_1 alr1883_3 alr1966_1 alr1966_3 alr2137_1 alr2258_3
        alr2266_1 alr2279_2 alr2428_5 alr2682_3 alr3120_2 alr3120_4 alr3356
        alr3761_1 alr3761_4 alr3982_1 alr5272_2 alr7522_1
  Eco:  yeaP_1
  EcZ:  Z2836m_1
  Ecs:  ECs2503_1
  Vch:  VCA0080_1 VCA0785_1
  Pae:  PA1243_2 PA2567_1 PA2771_1 PA2786 PA5017_2
  Rso:  RSc0588_2 RSp1155_2
  Atu:  AGc2058_1 AGl3494_2
  Sme:  SMb20389_1 SMb20933_2 SMc00038_2 SMc01507_1
  Bme:  BMEII1009_1
  Mlo:  mll2385_2 mll3440_2 mll8067_2 mll8067_4 mlr3659_1 mlr3690_1 mlr5400_1
  Ccr:  CC2670_1 CC2971_1 CC3560_1
_______

[T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
  Aae:  aq_1117 aq_164 aq_230
  Fnu:  FN1321 FN1831
  Bha:  BH0537 BH2948
  Eco:  atoC glnG hydG yfhA
  EcZ:  ZglnG ZhydG ZyfhA
  Ecs:  ECs3420 ECs4790 ECs4927
  Ype:  YPO0022 YPO0712 YPO2914
  Sty:  STM2396 STM2562 STM4005 STM4174
  Vch:  VC1021 VC1522 VC1926 VC2135 VC2137 VC2749 VCA0142
        VCA0704
  Pae:  PA1097 PA1099 PA1335 PA1945 PA4547 PA4726 PA5125
        PA5166 PA5483 PA5511
  Pmu:  PM1460
  Xfa:  XF1848 XF2545
  Nme:  NMB0115 NMB1607
  NmA:  NMA0159 NMA1805
  Rso:  RSc0078 RSc0332 RSc1186 RSc1261 RSc2807 RSp0009 RSp1667
        RSp1668
  Hpy:  HP0703
  jHp:  jhp0643
  Cje:  Cj1024c
  Atu:  AGc178 AGc2665 AGc2669 AGl2141 AGl3046
  Sme:  SMb20613 SMb21200 SMc01043 SMc01045 SMc04011
  Bme:  BMEI0866 BMEI0868 BMEII0011
  Mlo:  mll3001 mll9384_2 mlr0398 mlr0400 mlr5842 mlr7239
  Ccr:  CC0909 CC1741 CC1743 CC3315
  Rpr:  RP562
  Rco:  RC0849
  Ctr:  CT468
  Cpn:  CPn0586
  Tpa:  TP0519
  Bbu:  BB0763
_______

[T] COG2205 Osmosensitive K+ channel histidine kinase
  Dra:  DRB0088
  Cac:  CAC3678
  Mtu:  Rv1028c
  MtC:  MT1057
  Sau:  SA0067 SA1882
  Lin:  lin2827 pli0050
  Syn:  slr1731
  Nos:  all4242
  Eco:  kdpD
  EcZ:  ZkdpD
  Ecs:  ECs0723
  Ype:  YPO2689
  Sty:  STM0703
  Vch:  VCA0531
  Pae:  PA1636
  Rso:  RSc3385
  Cje:  Cj0679
  Atu:  AGl2094
  Sme:  SMa2327
  Mlo:  mll3127
  Ccr:  CC1594
_______

[T] COG2206 HD-GYP domain
  Aae:  aq_2027_1
  Tma:  TM0037 TM0739 TM1145 TM1170_3 TM1467_2 TM1678 TM1682_2
        TM1699_2
  Dra:  DR0039_2 DR0719_2 DR1565 DRA0342_2
  Cac:  CAC0277 CAC0475 CAC0853 CAC2534 CAC2620 CAC2837 CAC3410
        CAC3650
  Bha:  BH0008 BH3794
  Nos:  all4304_2
  Vch:  VC1295_3 VC2340 VC2497 VCA0681 VCA0895_2 VCA0931
  Pae:  PA4108
  Rso:  RSc0592 RSc2515
  Atu:  AGc4164
  Mlo:  mll1989_1
  Tpa:  TP0764 TP0877 TP0912
  Bbu:  BB0374
_______

[K] COG2207 AraC-type DNA-binding domain-containing proteins
  Tma:  TM1005
  Fnu:  FN0315_1
  Cac:  CAC0426_1 CAC1333 CAC1451 CAC2608 CAC2818 CAC3512
  Cgl:  Cgl0036 Cgl0958 Cgl2415 Cgl2624
  Mtu:  Rv1395 Rv1931c_2 Rv3082c Rv3736 Rv3833
  MtC:  MT1440 MT1981_2 MT3167 MT3841 MT3941
  Lla:  L0229 L143624
  Spn:  SP0926 SP1433 SP1899
  Sau:  SA0097_1 SA0622 SA1337 SA2092 SA2169
  Lin:  lin0157 lin1114_2 lin1152 lin1814_1 lin2267 lin2953_1 lin2983
  Bsu:  BS_ybbB_1 BS_ybfI BS_ybfP BS_ydeC BS_ydeE_1 BS_yesS BS_yfiF
        BS_yisR BS_yobQ BS_ytdP
  Bha:  BH0401_1 BH0483 BH0594_1 BH0711 BH0724 BH0851 BH0989
        BH1786 BH1906 BH1958 BH2229 BH3443 BH3506_1 BH3634_1
        BH3702
  Syn:  sll1205 sll1408 slr1213_2 slr1489
  Nos:  all1651_2 all2035_2 all2149 all2159 all2237 all2580 all2613
        all2621 all3171 all3232_2 all4925 alr0429_2 alr2174 alr2178
        alr2184 alr2189 alr2208 alr2575 alr2587 alr2591 alr2595
        alr2625
  Eco:  adiY appY araC celD envY eutR feaR
        marA melR rhaR rhaS rob soxS xylR_2
        ybcM ydeO ydiP yeaM yhiW yhiX yidL
        yijO ykgA ykgD yneL ypdC yqhC
  EcZ:  Z0321 Z1789 Z2104 Z2199 Z2209 Z2724 Z3647
        Z4198 Z5000 ZadiY ZaraC ZcelD ZenvY ZmarA
        ZmelR ZrhaR ZrhaS Zrob ZsoxS ZxylR_2 ZyeaM
        ZyfeG ZyhiW ZyhiX ZyidL ZyijO ZykgA ZykgD
        ZyqhC
  Ecs:  ECs0068 ECs0287 ECs0337 ECs0343 ECs0598 ECs1087 ECs2104
        ECs2114 ECs2138 ECs2191 ECs2403 ECs2441 ECs2499 ECs3262
        ECs3308 ECs3734 ECs3895 ECs4395 ECs4396 ECs4452_2 ECs4457
        ECs4621 ECs4832 ECs4833 ECs4883 ECs5044 ECs5098 ECs5100
        ECs5354
  Ype:  YPCD1.49 YPMT1.81c YPO0260 YPO0332 YPO0333 YPO0401 YPO0456
        YPO0679 YPO1737 YPO1837 YPO1912 YPO2243 YPO2258 YPO2681
        YPO2762 YPO3619 YPO4034_2
  Sty:  PSLT008 STM0104 STM0363 STM0563 STM0581 STM1082 STM1108
        STM1279 STM1315 STM1355 STM1519 STM1671 STM2036_2 STM2454
        STM2867 STM2875 STM2899 STM3163 STM3175_1 STM3662_2 STM3678
        STM4048 STM4049 STM4117 STM4265 STM4295 STM4297 STM4315
        STM4423 STM4586
  Vch:  VC0192 VC0513 VC0838 VC1076 VC1260 VC1825 VC2080_2
        VCA0231 VCA0266 VCA0926 VCA0937 VCA1001 VCA1074
  Pae:  PA0163 PA0248 PA0306 PA0416 PA0564 PA0748 PA0780
        PA0791 PA0831 PA0864 PA1109 PA1182 PA1229 PA1235
        PA1261 PA1380 PA1599 PA1619 PA1713 PA2047 PA2096
        PA2227 PA2276 PA2281 PA2332 PA2337 PA2488 PA2489
        PA2511 PA2519 PA2556 PA2588 PA2696 PA2704 PA2917
        PA3027 PA3094 PA3215 PA3220 PA3269 PA3423 PA3571
        PA3830 PA3898 PA3927 PA4070 PA4094 PA4120 PA4227
        PA4288 PA4787 PA5032 PA5324 PA5342
  Hin:  HI1052 HI1106_2
  Pmu:  PM1524
  Xfa:  XF1254
  Nme:  NMB1591 NMB1878 NMB1967
  NmA:  NMA0483 NMA0578_2 NMA1783
  Rso:  RSc0132_1 RSc0234 RSc0625 RSc1813 RSc1832 RSc2591 RSc2598
        RSc3062 RSp0590 RSp0653 RSp0686 RSp0873 RSp1115 RSp1157
        RSp1247_1 RSp1387 RSp1639
  Cje:  Cj1042c
  Atu:  AGc1581 AGc1998 AGc2651 AGc275 AGc3663 AGc407 AGc425
        AGc720 AGl1086 AGl1135 AGl1303 AGl1441 AGl1713 AGl24
        AGl3175 AGl3315 AGl3316 AGl36 AGl448 AGl475 AGl593
        AGl645 AGl698_1 AGl818_1 AGpA203 AGpA396 AGpA482 AGpA810
  Sme:  SMa0319 SMa1454 SMa1749 SMa1822 SMa1823 SMa1825 SMa1900
        SMa2133 SMa2163 SMa2412 SMb20344 SMb20457 SMb20626 SMb20859
        SMb21336 SMb21385 SMb21419 SMb21559 SMb21649 SMc00429 SMc00479
        SMc00558 SMc00679 SMc00953 SMc00994 SMc01610 SMc02841_1 SMc02888
        SMc03170_1 SMc04264
  Bme:  BMEI1291 BMEI1384 BMEII0104 BMEII0143 BMEII0641 BMEII0648 BMEII0721
        BMEII0814 BMEII1098
  Mlo:  mll0489 mll0736 mll0782 mll1074 mll2686 mll2849 mll2850
        mll3235 mll4902_1 mll5158 mll6243 mll6433 mll6442 mll6710
        mll6970 mll7889 mll8212_1 mlr1196 mlr1270 mlr1331 mlr1696
        mlr1976 mlr2197 mlr2998 mlr3037 mlr3180_1 mlr3375 mlr3376
        mlr4907 mlr6129 mlr6727 msr4796
  Ccr:  CC0637 CC0713 CC0891 CC1501 CC1672 CC2399 CC2403
        CC2527_1 CC2573 CC3506 CC3729_1
_______

[TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit
  Tma:  TM0467
  Fnu:  FN1091
  Cac:  CAC3205
  Mtu:  Rv1364c_2
  MtC:  MT1410_2
  Sau:  SA1872
  Lin:  lin0891
  Bsu:  BS_rsbU BS_spoIIE BS_yvfP_2
  Bha:  BH0078 BH0526
  Syn:  sll1365 slr0114 slr1860_3 slr1983_3 slr2031
  Nos:  all1703_3 all1758 all3759_2 alr1086_2 alr2280_2
  Vch:  VCA1086_2
  Pae:  PA0172_3 PA2798_2 PA3346_2
  Sme:  SMb20450_3
  Mlo:  mll6700_3
  Ctr:  CT588
  Cpn:  CPn0793
  Tpa:  TP0218 TP0219 TP0854_2
_______

[C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
  Ype:  YPO1935 YPO3236
  Vch:  VC2291
  Pae:  PA2995
  Hin:  HI0170
  Pmu:  PM1332
  Nme:  NMB0565
  NmA:  NMA0748
  Ctr:  CT281
  Cpn:  CPn0430
_______

[S] COG2210 Uncharacterized conserved protein
  Afu:  AF0183 AF0555
  Hbs:  VNG6057C VNG6469C VNG7041 VNG7168
  Mac:  MA0809
  Tac:  Ta1171m Ta1415
  Tvo:  TVN1249 TVN1434
  Pya:  PAE2604 PAE2634 PAE2695 PAE2712
  Sso:  SSO1126 SSO2631
  Aae:  aq_389
  Fnu:  FN1903_4
  Sau:  SA0044_3 SA0082_3
  Bsu:  BS_yrkE
_______

[G] COG2211 Na+/melibiose symporter and related transporters
  Fnu:  FN0222
  Cac:  CAC0357 CAC0694 CAC3422 CAC3451
  Lla:  L0023 L0233 L113994
  Bsu:  BS_ydjD BS_yjmB BS_ynaJ
  Syn:  sll1374
  Nos:  alr3705
  Eco:  melB uidB yagG yicJ yihO yihP
  EcZ:  Z5001 ZmelB ZuidB ZyicJ ZyihO ZyihP
  Ecs:  ECs2323 ECs4458 ECs4533 ECs4798 ECs4799 ECs5102
  Ype:  YPO0995 YPO1226
  Sty:  STM0042 STM0149 STM3750 STM4017 STM4018 STM4065 STM4299
  Ccr:  CC1748 CC3030
_______

[P] COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit
  Hbs:  VNG0568C
  Mac:  MA4567
  Mth:  MTH1250
  Pho:  PH1427a
  Pab:  PAB3171 PAB3177 PAB3299
  Tma:  TM1206
  Dra:  DR0885
  Cgl:  Cgl2676
  Sau:  SA0583 SA0808
  Lin:  lin2482
  Bsu:  BS_mrpF
  Bha:  BH1314
  Vch:  VCA0153
  Pae:  PA1058
  Atu:  AGc1665 AGc896
  Sme:  SMc00056 SMc03183
  Bme:  BMEII0766
  Rpr:  RP561a
_______

[G] COG2213 Phosphotransferase system, mannitol-specific IIBC component
  Cac:  CAC0154
  Spn:  SP0394
  Sau:  SA1960
  Lin:  lin2931
  Bsu:  BS_mtlA_1
  Bha:  BH3854
  Eco:  cmtA mtlA_1
  EcZ:  ZcmtA ZmtlA_1
  Ecs:  ECs3808 ECs4475_1
  Ype:  YPO4068_1
  Sty:  STM3685_1
  Buc:  BU572_1
  Vch:  VCA1045_1
  Pmu:  PM1061_1
  Mpu:  MYPU_7510 MYPU_7520
  Mpn:  MPN651
_______

[O] COG2214 DnaJ-class molecular chaperone
  Hbs:  VNG1675H VNG2132Gm_1
  Sce:  YER048c YFR041c YGL128c YIR004w YJL073w YJL162c YJR097w
        YLR008c YMR161w YNL007c YNL227c YNL328c YPR061c
  Spo:  SPAC1071.09c SPAC2E1P5.03 SPAC4G9.19 SPAC4H3.01 SPAC6B12.08 SPAC824.06 SPAC926.05c
        SPBC11B10.05c SPBC1734.05c SPBC1773.09c SPBC17A3.05c SPBC3E7.11c SPBC543.02c_2 SPCC10H11.02
        SPCC63.03 SPCC63.13 SPCC830.07c
  Ecu:  ECU01g0570 ECU02g0300 ECU03g1500 ECU04g0120_2 ECU06g1340 ECU07g0780 ECU10g1100
  Tma:  TM1803
  Dra:  DR0126
  Cac:  CAC0648
  Syn:  sll1011_1 sll1384 sll1666 sll1933 slr0093
  Nos:  all1488 all2916 all3048_1 all4355 all4413_2 all4643 alr0246
        alr2979 alr2991 alr2993 alr4553
  Eco:  cbpA
  EcZ:  ZcbpA
  Ecs:  ECs1155
  Sty:  STM1112
  Vch:  VC1194_2 VCA0788
  Pae:  PA1191
  Xfa:  XF0207 XF2233
  Nme:  NMB1027_1
  NmA:  NMA1461_1
  Hpy:  HP1024 HP1336
  jHp:  jhp0400 jhp1255
  Cje:  Cj1229
  Atu:  AGc1376 AGc3642 AGl2405 AGpA763
  Sme:  SMa0116 SMc00003 SMc00699 SMc04233
  Bme:  BMEI0047 BMEI1513
  Mlo:  mll0667 mll3564 mlr0945 mlr7456
  Ccr:  CC0917 CC2164 CC2772 CC3010
  Tpa:  TP0098 TP0843
  Bbu:  BB0602 BB0655
  Mpn:  MPN002 MPN119_1
  Mge:  MG002 MG200_1
_______

[R] COG2215 ABC-type uncharacterized transport system, permease component
  Mja:  MJ1092
  Fnu:  FN1115
  Eco:  yohM
  EcZ:  ZyohM
  Ecs:  ECs2912
  Ype:  YPO2901
  Sty:  STM2551 STM3024
  Hin:  HI1248
  Pmu:  PM0427
  Rso:  RSp0552
  Atu:  AGl741
  Sme:  SMa1644 SMc02986
  Bme:  BMEII1137
  Mlo:  mlr2980
  Tpa:  TP0558
_______

[P] COG2216 High-affinity K+ transport system, ATPase chain B
  Hbs:  VNG6177G
  Tac:  Ta1309
  Tvo:  TVN0500
  Dra:  DRB0083
  Cac:  CAC3681
  Mtu:  Rv1030
  MtC:  MT1059
  Sau:  SA0070 SA1880
  Lin:  lin2829 pli0053
  Syn:  slr1729
  Nos:  all3153 all4245
  Eco:  kdpB
  EcZ:  ZkdpB
  Ecs:  ECs0725
  Ype:  YPO2691
  Sty:  STM0705
  Pae:  PA1634
  Rso:  RSc3383
  Cje:  Cj0677
  Atu:  AGl2090
  Sme:  SMa2331
  Mlo:  mll3130
  Ccr:  CC1592
_______

[P] COG2217 Cation transport ATPase
  Afu:  AF0152 AF0191 AF0192 AF0473
  Hbs:  VNG0149G VNG0700G VNG2201G
  Mac:  MA0166 MA1342 MA3632
  Mth:  MTH1535 MTH411 MTH755
  Tac:  Ta1143
  Tvo:  TVN1240
  Pab:  PAB0626
  Pya:  PAE2758
  Sso:  SSO2651 SSO2896
  Ape:  APE1454 APE2571
  Sce:  YBR295w_2 YDR270w
  Spo:  SPBC29A3.01
  Aae:  aq_1125 aq_1445
  Tma:  TM0317
  Fnu:  FN0245 FN0258 FN1190
  Dra:  DR1440 DR2453 DRA0073
  Cac:  CAC2241 CAC3655
  Cgl:  Cgl0382 Cgl0429 Cgl0475 Cgl1150 Cgl2900 Cgl2914
  Mtu:  Rv0092 Rv0103c Rv0969 Rv1469 Rv1992c Rv3270 Rv3743c
  MtC:  MT0101 MT0112 MT0997 MT1515 MT2048 MT3370 MT3851
  Mle:  ML0747 ML1987 ML2000
  Lla:  L45966 L63697 L70979 L96595
  Spy:  SPy1434 SPy1715
  Spn:  SP0729 SP2101
  Sau:  SA2344
  Lin:  lin0644 lin1967 pli0048 pli0061
  Bsu:  BS_ykvW BS_yvgW BS_yvgX
  Bha:  BH0557 BH0744 BH4036
  Syn:  sll1920 slr0797 slr0798 slr1950
  Nos:  all2004 all2908 all3161 all3782 all7592 alr1627 alr7622
        alr7635
  Eco:  ybaR zntA
  EcZ:  ZybaR ZzntA
  Ecs:  ECs0537 ECs4318
  Ype:  YPO3086 YPO3820
  Sty:  STM0353 STM0498 STM3576
  Vch:  VC1033 VC1437 VC2215
  Pae:  PA1549 PA2435 PA3690 PA3920
  Hin:  HI0290
  Pmu:  PM1892
  Nme:  NMB1042 NMB1325
  NmA:  NMA1444 NMA1539
  Rso:  RSc1274 RSc3348 RSp0319
  Hpy:  HP0791 HP1072 HP1503
  jHp:  jhp0353 jhp0727 jhp1396
  Cje:  Cj1155c Cj1161c
  Atu:  AGc1540 AGc1708 AGc2202 AGc2817
  Sme:  SMa0621 SMa1013 SMa1087 SMa1163 SMa1209 SMb21578 SMc04128
  Bme:  BMEI0053 BMEI1569 BMEI1730 BMEII0097
  Mlo:  mll2475 mll6590 mll6624 mlr5325 mlr6417
  Ccr:  CC1407 CC2726
  Ctr:  CT727
  Cpn:  CPn0868
  Tpa:  TP1036
  Uur:  UU203
_______

[C] COG2218 Formylmethanofuran dehydrogenase subunit C
  Afu:  AF1931
  Mac:  MA0307 MA0832 MA4176
  Mth:  MTH1558 MTH238 MTH918_1
  Mja:  MJ0658 MJ1171
  Mka:  MK1530
_______

[L] COG2219 Eukaryotic-type DNA primase, large subunit
  Afu:  AF0336
  Hbs:  VNG2254C
  Mac:  MA0109
  Mth:  MTH586
  Mja:  MJ0701
  Mka:  MK1394
  Tac:  Ta1038
  Tvo:  TVN0557
  Pho:  PH0196
  Pab:  PAB2235
  Pya:  PAE2238
  Sso:  SSO0557
  Ape:  APE0667
  Sce:  YKL045w
  Spo:  SPBC17D11.06
  Ecu:  ECU05g1210
_______

[R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold
  Afu:  AF1265 AF2153
  Hbs:  VNG0851C VNG0883H VNG1038C
  Mac:  MA0289 MA0360 MA0365 MA1308
  Mth:  MTH1902
  Mja:  MJ1163
  Mka:  MK1542
  Tac:  Ta0764m
  Tvo:  TVN0850
  Pho:  PH0120 PH1671
  Pab:  PAB0339 PAB2269
  Pya:  PAE2160 PAE3189
  Sso:  SSO0099 SSO2406
  Ape:  APE0176 APE1117
  Sce:  YPL103c
  Tma:  TM0207 TM1162
  Fnu:  FN1387
  Dra:  DR0006
  Cac:  CAC0482
  Cgl:  Cgl1048
  Mtu:  Rv0786c Rv0906 Rv3577 Rv3818
  MtC:  MT0810 MT0929 MT3682 MT3926
  Spy:  SPy0182
  Spn:  SP2031
  Sau:  SA1529 SA2259
  Lin:  lin1612
  Bsu:  BS_yddR BS_ytkL
  Bha:  BH2089 BH3116 BH3178
  Syn:  sll0157 slr2005
  Nos:  all0268 all2641_1 all5037
  Eco:  yjfR
  EcZ:  Z0443 ZyjfR
  Ecs:  ECs0400 ECs5168
  Ype:  YPO1228
  Sty:  STM4382
  Vch:  VC0376 VCA0248
  Pae:  PA3969
  Pmu:  PM0763
  Xfa:  XF1739 XF2024
  Rso:  RSp0639 RSp1122 RSp1389
  Cje:  Cj0760
  Atu:  AGc2426 AGc4888 AGl2211
  Sme:  SMc01354 SMc02332 SMc03970
  Bme:  BMEII0673
  Mlo:  mll0680 mlr4314
  Rco:  RC1166
_______

[C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
  Afu:  AF0423 AF0424
  Mac:  MA3439
  Mth:  MTH280_2
  Mja:  MJ0551 MJ0870_2
  Mka:  MK0799_2 MK0801
  Pya:  PAE2571 PAE2572 PAE2596 PAE2597
  Cac:  CAC1515
  Sty:  STM2550
_______

[M] COG2222 Predicted phosphosugar isomerases
  Mth:  MTH860
  Mka:  MK0918
  Pho:  PH0510
  Pab:  PAB1348
  Tma:  TM0813
  Fnu:  FN0627
  Dra:  DRA0154
  Cac:  CAC3501
  Spy:  SPy0716
  Spn:  SP0065
  Lin:  lin2106
  Bsu:  BS_yurP
  Eco:  agaS yhfN
  EcZ:  ZagaS ZyhfN
  Ecs:  ECs4016 ECs4222
  Ype:  YPO0833
  Sty:  STM0572 STM3601 STM4540
  Pae:  PA3759
  Xfa:  XF1464
  Atu:  AGc4724
  Sme:  SMb21218 SMc02877 SMc03139
  Bme:  BMEII0384
  Mlo:  mll4767 mlr3643
  Ccr:  CC0444 CC0535
_______

[P] COG2223 Nitrate/nitrite transporter
  Aae:  aq_215
  Cgl:  Cgl1164
  Mtu:  Rv0261c Rv0267 Rv1737c Rv2329c
  MtC:  MT0274 MT0280 MT1779 MT2391
  Mle:  ML0844
  Sau:  SA2176
  Bsu:  BS_narK BS_nasA
  Bha:  BH0232 BH0612
  Eco:  narK narU
  EcZ:  ZnarK ZnarU
  Ecs:  ECs1728 ECs2072
  Sty:  STM1576 STM1765
  Pae:  PA1783 PA3876 PA3877
  Rso:  RSp0972 RSp0973 RSp1223
  Sme:  SMb20436
  Bme:  BMEII0948
  Ccr:  CC0614
_______

[C] COG2224 Isocitrate lyase
  Sso:  SSO1333
  Sce:  YER065c YPR006c
  Spo:  SPBC1683.11c
  Dra:  DR0828
  Cgl:  Cgl2279
  Mtu:  Rv0467 Rv1915 Rv1916
  MtC:  MT0483 MT1966
  Mle:  ML1985
  Bha:  BH2677
  Eco:  aceA
  EcZ:  ZaceA
  Ecs:  ECs4933
  Ype:  YPO3725
  Sty:  STM4184
  Vch:  VC0736
  Pae:  PA2634
  Rso:  RSc1358
  Atu:  AGc1079
  Sme:  SMc00768
  Bme:  BMEI0409
  Mlo:  mll6527
  Ccr:  CC1764
_______

[C] COG2225 Malate synthase
  Pya:  PAE1287
  Sso:  SSO1334
  Sce:  YIR031c YNL117w
  Dra:  DR1155 DRA0277
  Cgl:  Cgl2278
  Mtu:  Rv1837c
  MtC:  MT1885
  Mle:  ML2069
  Bha:  BH2133
  Eco:  aceB glcB
  EcZ:  ZaceB
  Ecs:  ECs4932
  Ype:  YPO3726
  Sty:  STM4183
  Vch:  VC0734 VCA0957
  Pae:  PA0482
  Rso:  RSc1363
  Atu:  AGc78
  Sme:  SMc02581
  Bme:  BMEI0380
  Mlo:  mlr4664
  Ccr:  CC1765
_______

[H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis
  Mac:  MA2333 MA2408 MA3655 MA4347
  Tac:  Ta0801
  Tvo:  TVN1030
  Pya:  PAE2338
  Sso:  SSO1808
  Sce:  YML110c
  Spo:  SPCC4G3.04c
  Aae:  aq_338
  Tma:  TM0753
  Fnu:  FN1543
  Dra:  DR2405
  Cgl:  Cgl0464
  Mtu:  Rv0558
  MtC:  MT0584
  Mle:  ML2273
  Sau:  SA1303
  Lin:  lin2045
  Bsu:  BS_gerCB
  Bha:  BH1649
  Syn:  sll1653 slr0407
  Nos:  all0538 alr5252
  Eco:  ubiE
  EcZ:  ZubiE
  Ecs:  ECs4763
  Ype:  YPO3781
  Sty:  STM3970
  Vch:  VC0083
  Pae:  PA5063
  Pmu:  PM1686
  Xfa:  XF1487
  Nme:  NMB0743
  NmA:  NMA0956
  Rso:  RSc0458
  Hpy:  HP1483
  jHp:  jhp1376
  Cje:  Cj0324
  Atu:  AGc559
  Sme:  SMb20449 SMc01155
  Bme:  BMEII0233
  Mlo:  mll6702 mlr3165
  Ccr:  CC3708
  Rpr:  RP680
  Rco:  RC1037
  Ctr:  CT428
  Cpn:  CPn0515
_______

[H] COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
  Sce:  YOL096c
  Spo:  SPCC162.05
  Dra:  DRA0327
  Syn:  slr0525 slr1071
  Nos:  alr3201 alr5231
  Eco:  ubiG
  EcZ:  ZubiG
  Ecs:  ECs3115
  Ype:  YPO1215
  Sty:  STM2276
  Vch:  VC1257
  Pae:  PA3171
  Pmu:  PM0840
  Xfa:  XF2471
  Nme:  NMB2030
  NmA:  NMA0410
  Rso:  RSc0898
  Atu:  AGl2640
  Sme:  SMc02440
  Bme:  BMEI0188
  Mlo:  mlr3442
  Ccr:  CC0840
  Rpr:  RP622
  Rco:  RC0965
_______

[R] COG2229 Predicted GTPase
  Mth:  MTH594_2 MTH765
  Mja:  MJ1339
  Mka:  MK1372
  Sce:  YKL154w
  Spo:  SPAC23H4.07c
  Aae:  aq_1844
  Dra:  DR2181
  Mtu:  Rv3362c
  MtC:  MT3470
  Nme:  NMB0477
  NmA:  NMA2008
_______

[M] COG2230 Cyclopropane fatty acid synthase and related methyltransferases
  Mac:  MA0314 MA1834 MA3170 MA3531 MA3951
  Aae:  aq_1737
  Dra:  DR2187
  Cac:  CAC0877
  Cgl:  Cgl0557 Cgl1431
  Mtu:  Rv0447c Rv0469 Rv0470c Rv0503c Rv0642c Rv0643c Rv0644c
        Rv0645c Rv3392c Rv3720
  MtC:  MT0463 MT0486 MT0524 MT0670 MT0671 MT0672 MT0673
        MT3499 MT3823
  Mle:  ML1900 ML1903 ML2334 ML2426 ML2459
  Eco:  cfa
  EcZ:  Zcfa
  Ecs:  ECs2370
  Ype:  YPO2390
  Sty:  STM1427
  Vch:  VC1122
  Pae:  PA5546
  Rso:  RSc0766 RSp1446 RSp1657
  Hpy:  HP0416
  jHp:  jhp0968
  Cje:  Cj1183c
  Atu:  AGc1155 AGc3595 AGc3601
  Sme:  SMc00358 SMc02645
  Bme:  BMEI1484
  Mlo:  mll0368 mll4091 mll7842 mlr8091
  Ccr:  CC1427 CC2601
_______

[L] COG2231 Uncharacterized protein related to Endonuclease III
  Mac:  MA2268
  Mth:  MTH746
  Mja:  MJ1434
  Tac:  Ta0321
  Tvo:  TVN1273
  Sso:  SSO2484
  Aae:  aq_172
  Tma:  TM0382
  Sau:  SA0565
  Lin:  lin0662
  Hpy:  HP0602
  jHp:  jhp0549
  Cje:  Cj1083c
_______

[R] COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase
  Afu:  AF2257
  Mac:  MA3870
  Mth:  MTH947
  Mja:  MJ0776
  Mka:  MK1589
_______

[F] COG2233 Xanthine/uracil permeases
  Pab:  PAB1838
  Spo:  SPAC1399.01c
  Tma:  TM0819
  Fnu:  FN0888
  Dra:  DR2280 DRA0176
  Cac:  CAC0872 CAC2112
  Cgl:  Cgl1894 Cgl2307_1
  Lla:  L160092 L46118
  Spy:  SPy0831 SPy1137
  Spn:  SP1286 SP1848
  Sau:  SA0374 SA1042
  Lin:  lin1953 lin1997
  Bsu:  BS_pbuX BS_pyrP BS_yunJ BS_yunK BS_ywdJ
  Bha:  BH2540
  Eco:  uraA ybbY ycdG ygfO ygfU yicE
  EcZ:  ZuraA ZybbY ZycdG ZygfO ZygfU ZyicE
  Ecs:  ECs0575 ECs1252 ECs3359 ECs3755 ECs3760 ECs4530
  Ype:  YPO0034
  Sty:  STM0524 STM2497 STM3631 STM3747
  Vch:  VC2171 VC2712
  Pae:  PA0166 PA0352 PA1507 PA2938 PA4647
  Hin:  HI1227
  Pmu:  PM0018
  Nme:  NMB0930 NMB1315
  NmA:  NMA1126 NMA1528
  Rso:  RSc2118
  Atu:  AGl3468
  Sme:  SMb20134 SMb20289 SMc02512 SMc02513
  Bme:  BMEII0825
_______

[R] COG2234 Predicted aminopeptidases
  Afu:  AF0578
  Hbs:  VNG0575G VNG2002H
  Mac:  MA3216
  Mth:  MTH303
  Mka:  MK0503
  Pho:  PH0048
  Pab:  PAB0027
  Sce:  YBR074w YBR286w YDR415c
  Spo:  SPCC1259.02c SPCC1919.12c_1
  Aae:  aq_1891
  Cac:  CAC2843 CAC3508
  Mtu:  Rv0418 Rv1770
  MtC:  MT0432 MT1820.1
  Bsu:  BS_ywaD
  Bha:  BH3861
  Nos:  all2989 all4710
  Eco:  iap yfbL
  EcZ:  Ziap
  Ecs:  ECs3607
  Sty:  STM2936
  Vch:  VCA0813
  Pae:  PA0328_1 PA2939
  Xfa:  XF0820 XF2706
  Ccr:  CC0889 CC2502 CC2544 CC2579 CC2840 CC3107 CC3337_1
_______

[E] COG2235 Arginine deiminase
  Hbs:  VNG6317G
  Tac:  Ta0987
  Tvo:  TVN0477
  Sso:  SSO1148
  Mtu:  Rv1001
  MtC:  MT1030
  Lla:  L0329
  Spy:  SPy1547
  Spn:  SP2148
  Sau:  SA2428
  Lin:  lin0036
  Sty:  STM4467
  Vch:  VC0423
  Pae:  PA5171
  Sme:  SMa0693 SMa1670
  Mlo:  mll6733
  Bbu:  BB0841
  Mpn:  MPN304 MPN305 MPN560
_______

[R] COG2236 Predicted phosphoribosyltransferases
  Afu:  AF0239 AF1789
  Hbs:  VNG0335G
  Mac:  MA1687 MA4581
  Tac:  Ta1351
  Tvo:  TVN0260
  Pho:  PH0095 PH0271
  Pab:  PAB0060 PAB2405
  Pya:  PAE3049 PAE3514
  Sso:  SSO2342 SSO2424
  Ape:  APE0490 APE2071
  Sce:  YDR399w YJR133w
  Spo:  SPAC23C11.13c
  Cgl:  Cgl1433
  Nos:  all3704
  Nme:  NMB1912
  NmA:  NMA0543
  Rso:  RSc1227
  Hpy:  HP0735
  jHp:  jhp0672
  Cje:  Cj1370
  Tpa:  TP0050
  Bbu:  BB0103
_______

[S] COG2237 Predicted membrane protein
  Afu:  AF2058
  Hbs:  VNG0393C VNG2154C
  Mac:  MA1408
  Mja:  MJ1032
  Tac:  Ta1430
  Tvo:  TVN1448
  Pho:  PH1903
  Pab:  PAB1241
  Pya:  PAE1635
  Sso:  SSO0949
  Ape:  APE0771
_______

[J] COG2238 Ribosomal protein S19E (S16A)
  Afu:  AF2069
  Hbs:  VNG2010G
  Mac:  MA4117
  Mth:  MTH1616
  Mja:  MJ0692
  Mka:  MK1620
  Tac:  Ta0050
  Tvo:  TVN0007
  Pho:  PH1325
  Pab:  PAB1813
  Pya:  PAE3043
  Sso:  SSO0353
  Ape:  APE1090
  Sce:  YNL302c YOL121c
  Spo:  SPBC21C3.13 SPBC649.02
  Ecu:  ECU11g1620i
_______

[P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)
  Mth:  MTH620
  Tma:  TM1161
  Fnu:  FN1480
  Cac:  CAC0684
  Cgl:  Cgl0225 Cgl1101
  Mtu:  Rv0362 Rv1232c
  MtC:  MT0378 MT1270
  Sau:  SA0867
  Bsu:  BS_ykoK
  Bha:  BH0511 BH1947 BH1948 BH3224
  Syn:  slr1216
  Nos:  all1682 all5184
  Ype:  YPO2839
  Vch:  VC1655 VC2534 VCA0818
  Pae:  PA0913
  Xfa:  XF1400 XF1401
  Nme:  NMB1999
  NmA:  NMA0442
  Atu:  AGc1836 AGc2851
  Sme:  SMc01261
  Bme:  BMEII0418
  Mlo:  mll1318 mlr0521
  Ccr:  CC2174
  Rpr:  RP583
  Rco:  RC0886
  Ctr:  CT194
  Cpn:  CPn0286
  Tpa:  TP0917
  Bbu:  BB0380
  Uur:  UU009
  Mpu:  MYPU_4080
_______

[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase
  Sce:  YEL029c YNR027w
  Spo:  SPAC6F6.11c SPCC18.10
  Dra:  DRA0184
  Cac:  CAC1622
  Cgl:  Cgl0889
  Spy:  SPy1209
  Eco:  pdxK pdxY
  EcZ:  ZpdxK ZpdxY
  Ecs:  ECs2345 ECs3290
  Ype:  YPO2368
  Sty:  STM1450 STM2435
  Pae:  PA5516
  Hin:  HI0405
  Pmu:  PM0290
  Atu:  AGc4518
  Sme:  SMc04084
  Bme:  BMEI0221
  Mlo:  mlr4132
  Ccr:  CC0256
  Bbu:  BB0768
_______

[H] COG2241 Precorrin-6B methylase 1
  Afu:  AF0722
  Hbs:  VNG1568G
  Mac:  MA0520
  Mth:  MTH1514
  Mja:  MJ1522
  Mka:  MK1428
  Tac:  Ta0660_2
  Tvo:  TVN0916_2
  Pya:  PAE0340
  Sso:  SSO2296
  Fnu:  FN0966
  Cac:  CAC0584
  Cgl:  Cgl1449_1
  Mtu:  Rv2072c_1
  MtC:  MT2132_1
  Lin:  lin1158
  Syn:  sll0099_1
  Nos:  all3722_1
  Sty:  STM2031
  Pae:  PA2907_1
  Rso:  RSp0624
  Atu:  AGc5077_1
  Sme:  SMc03188_1
  Bme:  BMEI0716_1
  Mlo:  mlr1383_1
_______

[H] COG2242 Precorrin-6B methylase 2
  Afu:  AF0732
  Hbs:  VNG1550G
  Mac:  MA4263
  Mth:  MTH146
  Mja:  MJ0391
  Mka:  MK1037
  Tac:  Ta0657
  Tvo:  TVN0919
  Pya:  PAE0347
  Sso:  SSO2303
  Fnu:  FN0964
  Cac:  CAC1378
  Cgl:  Cgl1449_2
  Mtu:  Rv2072c_2
  MtC:  MT2132_2
  Lin:  lin1159
  Syn:  sll0099_2 slr1368
  Nos:  all3722_2 all3876
  Sty:  STM2030
  Pae:  PA2907_2
  Atu:  AGc5077_2
  Sme:  SMc03188_2
  Bme:  BMEI0716_2
  Mlo:  mlr1383_2
_______

[H] COG2243 Precorrin-2 methylase
  Afu:  AF0727
  Hbs:  VNG1551G
  Mac:  MA4262
  Mth:  MTH1348
  Mja:  MJ0771
  Mka:  MK1038
  Tac:  Ta0658
  Tvo:  TVN0918
  Pya:  PAE0348
  Sso:  SSO2301
  Fnu:  FN0959
  Cac:  CAC1379
  Mtu:  Rv2066_1
  MtC:  MT2126_1
  Lin:  lin1166
  Syn:  slr1879
  Nos:  all0455
  Sty:  STM2024
  Pae:  PA2904
  Rso:  RSp0621
  Atu:  AGc5080
  Sme:  SMc03191 SMc03194
  Bme:  BMEI0713
  Mlo:  mlr1380 mlr1461
_______

[R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
  Afu:  AF0595
  Hbs:  VNG0050C VNG0556G VNG1054G
  Mac:  MA1053 MA2180 MA2313 MA3764 MA4450 MA4461
  Mth:  MTH1471 MTH1472 MTH342 MTH347 MTH367 MTH379
  Mja:  MJ1068 MJ1375
  Mka:  MK1626
  Tac:  Ta0604 Ta0703
  Tvo:  TVN0654 TVN0889
  Pho:  PH0390 PH0421
  Pab:  PAB0766 PAB0783 PAB1409 PAB2422
  Sso:  SSO0837 SSO1624 SSO1780 SSO3228
  Tma:  TM0620
  Fnu:  FN1682
  Dra:  DRA0035
  Cac:  CAC1016 CAC1017 CAC2314 CAC2406 CAC3065 CAC3213
  Cgl:  Cgl0350
  Lla:  L13324 L52064
  Spy:  SPy0390 SPy0797
  Spn:  SP0356 SP1272 SP1529
  Sau:  SA0127 SA0462 SA1575
  Lin:  lin0247 lin1665 lin1666
  Bsu:  BS_spoVB BS_tuaB BS_yabM BS_ykvU BS_ytgP
  Bha:  BH0071 BH0822 BH1233 BH3277 BH3711
  Nos:  all2290 all4430 alr2857 alr3065 alr3072
  Eco:  rfbX wzxC wzxE yghQ
  EcZ:  Zwzx ZwzxC ZwzxE
  Ecs:  ECs2842 ECs2851 ECs4725
  Ype:  YPO3858
  Sty:  STM2088 STM2102 STM3926
  Vch:  VC0921
  Pae:  PA3153
  Hin:  HI0867 HI1700
  Pmu:  PM0507
  Xfa:  XF2362
  Nme:  NMB1818
  NmA:  NMA0643
  Rso:  RSc0686
  Atu:  AGc851 AGl151 AGl1596 AGl2565 AGl2615
  Sme:  SMb20950 SMb21050 SMb21244 SMb21513 SMc00743
  Bme:  BMEII0838 BMEII1003
  Mlo:  mll5270 mll6504 mlr3470 mlr6757 mlr9725
  Ccr:  CC1166 CC2426
_______

[S] COG2245 Predicted membrane protein
  Mja:  MJ1644
  Pho:  PH1319
  Pab:  PAB1809
  Pya:  PAE1128 PAE2762
  Ape:  APE1545
  Tma:  TM1675
_______

[S] COG2246 Predicted membrane protein
  Afu:  AF0615
  Hbs:  VNG1324C VNG2067H
  Mka:  MK0919
  Tac:  Ta0860m
  Tvo:  TVN0962
  Pho:  PH0051_2
  Pab:  PAB2307_2
  Pya:  PAE1555_2
  Sso:  SSO0449
  Ape:  APE0426_2
  Cac:  CAC1012
  Cgl:  Cgl0196
  Mtu:  Rv3277 Rv3789
  MtC:  MT3377 MT3897
  Mle:  ML0110 ML0734
  Lla:  L2829
  Spn:  SP1011
  Sau:  SA2219
  Lin:  lin2694
  Bsu:  BS_yngA BS_ywcD
  Syn:  sll1540_2
  Nos:  all2770_2 all4126_2
  Eco:  yfdG
  Sty:  STM0559 STM4206
  Pae:  PA4820
  Rso:  RSc0167
  Mlo:  mll3086 mlr4738 mlr8553
  Ccr:  CC2890
_______

[M] COG2247 Putative cell wall-binding domain
  Mja:  MJ0755
  Pho:  PH0614_1 PH1673 PH1674
  Pab:  PAB0336 PAB0337 PAB0953_1
  Bsu:  BS_lytB_1 BS_lytC_1
_______

[R] COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily)
  Afu:  AF0504
  Mja:  MJ1629
  Mka:  MK0213
  Pho:  PH1002
  Pab:  PAB1721
  Pya:  PAE3680
  Sso:  SSO3251
  Ape:  APE0500
_______

[R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B)
  Mac:  MA0147 MA0326
  Spo:  SPAC5H10.05c
  Fnu:  FN1233
  Cac:  CAC0018
  Lin:  lin1898 lin1903
  Bsu:  BS_ydeQ BS_yrkL BS_ywrO
  Bha:  BH2748 BH3885
  Eco:  mdaB yabF ycaK yheR
  EcZ:  ZmdaB ZyabF ZyheR
  Ecs:  ECs0049 ECs3910 ECs4202
  Ype:  YPO0190 YPO0670
  Sty:  STM0085 STM3179 STM3458
  Vch:  VC2607
  Pae:  PA0853 PA1224 PA1225 PA2580 PA4975
  Hin:  HI0648 HI1544
  Pmu:  PM0887
  Nme:  NMB0977 NMB1857
  NmA:  NMA0600 NMA1174
  Rso:  RSc2329 RSc3097
  Hpy:  HP0630
  jHp:  jhp0573
  Cje:  Cj1545c
  Sme:  SMa0346 SMa1168 SMc00379 SMc03185
  Mlo:  mll1286 mll1288 mll6586 mll7814
  Ccr:  CC0205 CC0277
  Uur:  UU380
_______

[S] COG2250 Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
  Afu:  AF0593 AF1585 AF1614 AF2305
  Mja:  MJ1304
  Mka:  MK1132 MK1138 MK1284 MK1292_2
  Pho:  PH0402 PH0690
  Pab:  PAB0897 PAB0899 PAB1764
  Pya:  PAE0044 PAE0168 PAE0273_1 PAE0904 PAE1155 PAE1310 PAE1319
        PAE1894 PAE1902 PAE2550 PAE2605 PAE2783 PAE3445
  Sso:  SSO1161 SSO1252 SSO1470 SSO1520 SSO1641 SSO1674 SSO1834
        SSO2106 SSO2294 SSO2530 SSO2780 SSO9136
  Ape:  APE0760 APE1272
  Tma:  TM0613
_______

[R] COG2251 Predicted nuclease (RecB family)
  Pho:  PH0109_1
  Pab:  PAB0067_1
  Tma:  TM0106
  Cgl:  Cgl2866
  Mtu:  Rv1251c_1
  MtC:  MT1290_1
  Mle:  ML1098_1
  Syn:  sll1686
  Nos:  all3209
_______

[R] COG2252 Permeases
  Hbs:  VNG2116C
  Mja:  MJ0326
  Pho:  PH1162
  Pab:  PAB1660
  Spo:  SPBC887.17
  Tma:  TM0594
  Fnu:  FN1025 FN1250 FN1877 FN2072
  Dra:  DRA0183
  Cac:  CAC2772 CAC2820
  Cgl:  Cgl0801
  Lla:  L171588
  Spy:  SPy1736
  Spn:  SP0287
  Sau:  SA2050
  Lin:  lin0582 lin1959 lin2356
  Bsu:  BS_yebB BS_ytiP
  Bha:  BH0608 BH1513 BH2030
  Syn:  slr0360
  Nos:  all7122
  Eco:  ygfQ ygfR yicO yieG yjcD
  EcZ:  Z4223 Z5153 Z5154 ZyieG ZyjcD
  Ecs:  ECs3757 ECs4600 ECs4601 ECs4651 ECs5046
  Ype:  YPO3629 YPO4107
  Sty:  STM3851 STM4268
  Vch:  VC2278
  Pae:  PA1519 PA4719
  Hin:  HI0125
  Pmu:  PM0287 PM0514
  Nme:  NMB0428
  NmA:  NMA2056
  Rso:  RSc0755 RSp1678
  Hpy:  HP1175
  jHp:  jhp1102
  Cje:  Cj1369
  Sme:  SMa1717 SMb21281
  Bme:  BMEII0617 BMEII0618
  Ccr:  CC0186
  Tpa:  TP0451a
  Bbu:  BBB22 BBB23
  Mpu:  MYPU_2810
_______

[S] COG2253 Uncharacterized conserved protein
  Hbs:  VNG6087C VNG7066 VNG7143
  Pho:  PH0371 PH0419
  Pab:  PAB1033 PAB2322
  Mtu:  Rv2826c
  MtC:  MT2893
_______

[L] COG2254 Predicted HD superfamily hydrolase, possibly a nuclease
  Afu:  AF1875
  Mja:  MJ0384
  Pho:  PH0916
  Pab:  PAB1690
  Pya:  PAE0067 PAE0207
  Sso:  SSO1269 SSO1403 SSO1439 SSO2001
  Ape:  APE1231
_______

[L] COG2255 Holliday junction resolvasome, helicase subunit
  Tma:  TM1730
  Fnu:  FN1217
  Dra:  DR0596
  Cac:  CAC2284
  Cgl:  Cgl1620
  Mtu:  Rv2592c
  MtC:  MT2669
  Mle:  ML0483
  Lla:  L0267
  Spy:  SPy0038
  Spn:  SP0259
  Sau:  SA1467
  Lin:  lin1567
  Bsu:  BS_ruvBm
  Bha:  BH1225
  Syn:  sll0613
  Nos:  all2894
  Eco:  ruvB
  EcZ:  ZruvB
  Ecs:  ECs2570
  Ype:  YPO2058
  Sty:  STM1894
  Vch:  VC1845
  Pae:  PA0967
  Hin:  HI0312
  Pmu:  PM0976
  Xfa:  XF1902
  Nme:  NMB1243
  NmA:  NMA1412
  Rso:  RSc0500
  Hpy:  HP1059
  jHp:  jhp0366
  Cje:  Cj1362
  Atu:  AGl2225
  Sme:  SMc03965
  Bme:  BMEI0334
  Mlo:  mll3895
  Ccr:  CC3236
  Rpr:  RP386
  Rco:  RC0533
  Ctr:  CT040
  Cpn:  CPn0390
  Tpa:  TP0162
  Bbu:  BB0022
  Uur:  UU438 UU448
  Mpu:  MYPU_6580
  Mpn:  MPN536
  Mge:  MG359
_______

[L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
  Sce:  YNL218w
  Spo:  SPAC26H5.02c
  Tma:  TM0508_1
  Fnu:  FN0297
  Dra:  DR1898
  Cac:  CAC0326 CAC1671
  Cgl:  Cgl1595
  Mtu:  Rv2559c
  MtC:  MT2636
  Mle:  ML0510
  Lla:  L99272
  Spy:  SPy1992
  Spn:  SP1790
  Sau:  SA1454
  Lin:  lin1549
  Bsu:  BS_yrvN
  Bha:  BH1257
  Eco:  ycaJ
  EcZ:  ZycaJ
  Ecs:  ECs0977
  Ype:  YPO1378
  Sty:  STM0962
  Vch:  VC1108
  Pae:  PA2613
  Hin:  HI1590
  Pmu:  PM0257
  Xfa:  XF1453
  Nme:  NMB1258
  NmA:  NMA1433
  Rso:  RSc2338
  Hpy:  HP1026
  jHp:  jhp0398
  Cje:  Cj0198c
  Atu:  AGc3505
  Sme:  SMc01279
  Bme:  BMEI0784
  Mlo:  mlr0329
  Ccr:  CC1283
  Uur:  UU196
_______

[S] COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB
  Tma:  TM1672
  Cac:  CAC0639
  Bsu:  BS_ylqH
  Bha:  BH1475 BH2473
  Pae:  PA1473
  Hpy:  HP1575
  jHp:  jhp1483
  Cje:  Cj0848c
  Ccr:  CC1907
  Tpa:  TP0911
_______

[S] COG2258 Uncharacterized protein conserved in bacteria
  Dra:  DR0134 DR0273 DR1051 DR1883
  Cac:  CAC1991
  Cgl:  Cgl0198
  Mtu:  Rv1864c
  MtC:  MT1913
  Sau:  SA2128
  Lin:  lin2166
  Bsu:  BS_yflK
  Bha:  BH0616
  Eco:  yiiM
  EcZ:  ZyiiM
  Ecs:  ECs4836
  Sty:  STM4056
  Pae:  PA0529 PA2229 PA4536 PA4875
  Hin:  HI0279m
  Rso:  RSc1157
  Cje:  Cj0602c
  Atu:  AGc144
  Bme:  BMEI0281
_______

[S] COG2259 Predicted membrane protein
  Hbs:  VNG2413H
  Sso:  SSO2707 SSO3091
  Sce:  YGR284c
  Spo:  SPCC970.06
  Dra:  DR1841
  Cgl:  Cgl0446 Cgl0862 Cgl1237 Cgl1340_1
  Mtu:  Rv3005c Rv3064c Rv3486
  MtC:  MT3085 MT3150 MT3590
  Mle:  ML0956 ML1698
  Sau:  SA0890
  Bsu:  BS_ydfP BS_yfiD
  Bha:  BH2085 BH2253 BH3304
  Nos:  all3051
  Eco:  yphA yqjF
  EcZ:  ZyphA ZyqjF
  Ecs:  ECs3409 ECs3983
  Ype:  YPO0568
  Sty:  STM3232
  Vch:  VCA1019
  Pae:  PA2864 PA3281 PA4104 PA4205
  Hin:  HI0886 HI1602
  Pmu:  PM0213
  Nme:  NMB0291 NMB2140
  NmA:  NMA0226 NMA2196
  Rso:  RSc0240 RSc2500 RSp1037
  Atu:  AGc1217 AGc388 AGc4242 AGl1741
  Sme:  SMa0333 SMa1817 SMb20527 SMb20597 SMc00346 SMc02174
  Bme:  BMEII1052
  Mlo:  mll1639 mll1779 mll1960 mll8168 mll8170 mlr1652 mlr7893
  Ccr:  CC3257
_______

[J] COG2260 Predicted Zn-ribbon RNA-binding protein
  Afu:  AF0526
  Hbs:  VNG0548C
  Mac:  MA0643
  Mth:  MTH1307
  Mja:  MJ0116.1
  Mka:  MK0420
  Tac:  Ta1202
  Tvo:  TVN0411
  Pho:  PH0959a
  Pab:  PAB7213
  Pya:  PAE3031
  Sso:  SSO7115
  Ape:  APE0433a
  Sce:  YHR072w-a
  Spo:  SPAP27G11.13c
_______

[S] COG2261 Predicted membrane protein
  Dra:  DR2389
  Cgl:  Cgl2877
  Mtu:  Rv1861
  MtC:  MT1910
  Mle:  ML2054
  Lla:  L144047 L67002
  Spy:  SPy1265 SPy1768
  Spn:  SP0279 SP1801
  Sau:  SA0360
  Bsu:  BS_ydaS BS_ywzA
  Nos:  asl4654 asr3089
  Eco:  yeaQ ymgE
  EcZ:  ZyeaQ ZymgE
  Ecs:  ECs1692 ECs2504
  Ype:  YPO1181
  Sty:  STM1274 STM1797
  Pae:  PA5424
  Rso:  RSc1077
  Atu:  AGc2645 AGc3015 AGl1519
  Sme:  SMa1766 SMc01036 SMc02320
  Bme:  BMEI0216 BMEI1013 BMEI1501
  Mlo:  msl3293 msl4714 msl5749 msr0259 msr0389 msr2497
  Ccr:  CC1682
_______

[R] COG2262 GTPases
  Hbs:  VNG1275Gm VNG2611G
  Mac:  MA3622
  Mja:  MJ1126
  Mka:  MK0456
  Pho:  PH1132
  Pab:  PAB0722
  Pya:  PAE0782
  Sso:  SSO0269
  Ape:  APE2007
  Aae:  aq_1908
  Tma:  TM0527
  Fnu:  FN0823
  Dra:  DR0139
  Cac:  CAC2299
  Cgl:  Cgl1895
  Mtu:  Rv2725c
  MtC:  MT2797
  Mle:  ML0997
  Lla:  L0162
  Spy:  SPy0922
  Spn:  SP0672
  Sau:  SA1147
  Lin:  lin0756 lin1334
  Bsu:  BS_ynbA
  Bha:  BH2362
  Syn:  slr1521
  Nos:  all3862
  Eco:  hflX
  EcZ:  ZhflX
  Ecs:  ECs5149
  Ype:  YPO0374
  Sty:  STM4362
  Vch:  VC0348
  Pae:  PA4943
  Pmu:  PM0907
  Xfa:  XF0088
  Nme:  NMB1041
  NmA:  NMA1445
  Rso:  RSc1221
  Atu:  AGc2675 AGc2676
  Sme:  SMc01049
  Bme:  BMEI0873
  Mlo:  mlr0403
  Ccr:  CC1746
  Ctr:  CT379
  Cpn:  CPn0478
_______

[J] COG2263 Predicted RNA methylase
  Afu:  AF0205
  Hbs:  VNG0857Cm
  Mac:  MA0719
  Mth:  MTH1918
  Mja:  MJ0284
  Mka:  MK0062 MK1438
  Tac:  Ta1320
  Tvo:  TVN0270
  Pho:  PH1948
  Pab:  PAB1205
  Pya:  PAE0261
  Sso:  SSO2158
  Ape:  APE0446
  Ecu:  ECU08g1860
_______

[J] COG2264 Ribosomal protein L11 methylase
  Aae:  aq_2102
  Tma:  TM1079
  Fnu:  FN1608
  Dra:  DR1521
  Cac:  CAC1284
  Lla:  L104221
  Spy:  SPy1988
  Spn:  SP1782
  Sau:  SA1407
  Lin:  lin1508
  Bsu:  BS_yqeT
  Bha:  BH1349
  Syn:  sll1909
  Nos:  alr1419 alr1891
  Eco:  prmA
  EcZ:  ZprmA
  Ecs:  ECs4131
  Ype:  YPO3656
  Sty:  STM3383
  Vch:  VC0293
  Pae:  PA4850
  Hin:  HI0978
  Pmu:  PM1088
  Xfa:  XF2201
  Nme:  NMB1862
  NmA:  NMA0595
  Rso:  RSc2788
  Hpy:  HP1068
  jHp:  jhp0357
  Cje:  Cj1117c
  Atu:  AGc3754
  Sme:  SMa0773 SMc01472
  Bme:  BMEI0592
  Mlo:  mlr1533
  Ccr:  CC1526
_______

[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase
  Pho:  PH1137 PH1259
  Pab:  PAB0719 PAB0760
  Sce:  YKR056w
  Spo:  SPAC4G8.07c
  Aae:  aq_257
  Tma:  TM1094
  Fnu:  FN1713
  Dra:  DR0238
  Cac:  CAC0523 CAC1435
  Cgl:  Cgl1857
  Mtu:  Rv2689c
  MtC:  MT2763
  Lla:  L193873 L37880
  Spy:  SPy1346 SPy1606
  Spn:  SP1029 SP1901
  Sau:  SA1713
  Lin:  lin1815 lin1863
  Bsu:  BS_yefA BS_yfjO
  Bha:  BH0687 BH0897
  Syn:  sll1967
  Nos:  alr3654
  Eco:  trmA ybjF ygcA
  EcZ:  ZtrmA ZybjF ZygcA
  Ecs:  ECs0939 ECs3645 ECs4896
  Ype:  YPO1336 YPO3911
  Sty:  STM0882 STM2957 STM4129
  Vch:  VC0154 VC2452 VCA0929
  Pae:  PA0933 PA4720
  Hin:  HI0333 HI0848 HI0958
  Pmu:  PM0070 PM1803 PM1866
  Xfa:  XF2358
  Nme:  NMB1679
  NmA:  NMA1938
  Rso:  RSc1209
  Cje:  Cj0831c
  Atu:  AGc1331
  Sme:  SMc00974
  Bme:  BMEI1496
  Mlo:  mlr7480
  Ccr:  CC1326
  Ctr:  CT742
  Cpn:  CPn0885
_______

[H] COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase
  Afu:  AF2321
  Hbs:  VNG1581C
  Mac:  MA0938
  Mth:  MTH1152
  Mja:  MJ1117
  Mka:  MK1670
  Tac:  Ta1409m
  Tvo:  TVN1428
  Pho:  PH0372
  Pab:  PAB2323
  Pya:  PAE0369_1
  Sso:  SSO0054
  Ape:  APE2034
_______

[I] COG2267 Lysophospholipase
  Afu:  AF1753
  Pab:  PAB1050
  Sce:  YKL094w
  Spo:  SPCC5E4.05c
  Tma:  TM1350
  Fnu:  FN1306_1
  Dra:  DR1537 DR2522
  Cac:  CAC2246
  Cgl:  Cgl1956 Cgl2514
  Mtu:  Rv0183 Rv2854
  MtC:  MT0192 MT2921
  Mle:  ML2603
  Lla:  L7563
  Sau:  SA1143 SA1584
  Lin:  lin1226
  Bsu:  BS_ytpA
  Bha:  BH0879 BH3288
  Nos:  alr0851
  Eco:  pldB ynbC_1
  EcZ:  Z2317_1 ZpldB
  Ecs:  ECs2012_1 ECs4755
  Ype:  YPO2814_1 YPO3830 YPO4014
  Sty:  STM3961
  Vch:  VC0135
  Pae:  PA0308 PA2540_1 PA3301
  Hin:  HI0645
  Pmu:  PM1631
  Rso:  RSc2319 RSc3346
  Atu:  AGc3857 AGl1924
  Sme:  SMc02818 SMc04041
  Bme:  BMEI0552 BMEII0047
  Mlo:  mlr1612 mlr3034
  Ccr:  CC1734 CC2083 CC2253 CC3441
_______

[S] COG2268 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl0631
  Lla:  L145739
  Bsu:  BS_yuaG
  Bha:  BH3500
  Syn:  sll1021
  Nos:  all0966 alr4526 alr4528
  Eco:  yqiK
  EcZ:  Z4403
  Ecs:  ECs3933
  Sty:  STM3199
  Pae:  PA3729
  Mlo:  mll0592
_______

[J] COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
  Aae:  aq_763
  Eco:  yjeA
  EcZ:  ZyjeA
  Ecs:  ECs5136
  Ype:  YPO0362
  Sty:  STM4344
  Buc:  BU582
  Vch:  VC2655
  Hin:  HI0836
  Pmu:  PM0202
  Xfa:  XF2555
  Atu:  AGc4627
  Sme:  SMc00356
  Mlo:  mlr8260
  Ccr:  CC0720
  Tpa:  TP1040
_______

[R] COG2270 Permeases of the major facilitator superfamily
  Sce:  YCL038c
  Spo:  SPAC2G11.13
  Aae:  aq_1569
  Cac:  CAC1585 CAC2743
  Cgl:  Cgl2562
  Mtu:  Rv2508c
  MtC:  MT2583
  Mle:  ML0430
  Lin:  lin1456
  Bsu:  BS_yxiO
  Bha:  BH2931m
  Atu:  AGc5017
  Sme:  SMc04087
  Bme:  BMEI0232
  Mlo:  mll4103
  Ccr:  CC2954
_______

[G] COG2271 Sugar phosphate permease
  Lla:  L148346
  Spy:  SPy0442
  Sau:  SA0214 SA0325
  Bsu:  BS_glpT
  Eco:  glpT uhpC uhpT
  EcZ:  Z0461 ZglpT ZuhpC ZuhpT
  Ecs:  ECs0416 ECs3125 ECs4603 ECs4604
  Ype:  YPO4007
  Sty:  STM2198 STM2283 STM2399 STM3787 STM3788
  Vch:  VCA0137 VCA0684 VCA0707
  Pae:  PA1144 PA1569 PA5235
  Hin:  HI0686
  Pmu:  PM1338 PM1341 PM1443
  Cje:  Cj0291c
  Rpr:  RP054
  Rco:  RC0082
  Ctr:  CT544
  Cpn:  CPn0665
_______

[I] COG2272 Carboxylesterase type B
  Spo:  SPCC417.12
  Dra:  DR0415 DR2626
  Cac:  CAP0050
  Cgl:  Cgl1109 Cgl2249
  Mtu:  Rv1104 Rv1105 Rv2045c
  MtC:  MT2105
  Sau:  SA2240
  Bsu:  BS_pnbA
  Sty:  STM1623
  Rso:  RSc2593
  Ccr:  CC0799
_______

[G] COG2273 Beta-glucanase/Beta-glucan synthetase
  Sce:  YEL040w YGR143w YGR189c YLR213c YPR159w
  Spo:  SPAC17G6.11c SPAC23H3.11c
  Tma:  TM0024
  Cac:  CAC2807
  Mtu:  Rv0315
  MtC:  MT0329
  Bsu:  BS_bglS
  Bha:  BH3231 BH3232
  Atu:  AGl1600 AGl2532_2
  Sme:  SMa1587_2 SMb20932_2 SMb20955
  Mlo:  mll2585_2 mlr5264
  Ccr:  CC0380
_______

[V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
  Cac:  CAP0073
  Lla:  L82520
  Spn:  SP0042 SP1953
  Bsu:  BS_sunT
  Bha:  BH0451
  Syn:  sll1180 slr1651
  Nos:  all2020 all2021 all2676 all7315 alr1201 alr1614 alr1927
        alr2817 alr4239 alr5147 alr7014 alr7295 alr7297
  EcZ:  Z0634
  Ecs:  ECs0543
  Ype:  YPO2252
  Sty:  STM2691 STM4262
  Vch:  VC1446 VC1448 VCA1084
  Pae:  PA1876 PA4143
  Xfa:  XF1220 XF2397
  Nme:  NMB1400
  NmA:  NMA1620
  Rso:  RSp0292 RSp1182
  Sme:  SMc02661
  Mlo:  mlr0588
  Ccr:  CC0684
  Uur:  UU510
  Mpu:  MYPU_3760
  Mpn:  MPN571
  Mge:  MG390
_______

[G] COG2301 Citrate lyase beta subunit
  Hbs:  VNG0627G
  Sso:  SSO1254
  Ape:  APE0311
  Fnu:  FN1379
  Dra:  DR1240 DR2206 DR2219
  Cgl:  Cgl0839
  Mtu:  Rv2498c Rv3075c
  MtC:  MT2573 MT3160
  Lla:  L0040
  Spy:  SPy1188
  Eco:  citE
  EcZ:  Z1166 Z1605 ZcitE
  Ecs:  ECs0655 ECs1345
  Ype:  YPO0289 YPO1928
  Sty:  STM0060 STM0622 STM0854 STM3120
  Vch:  VC0798
  Pae:  PA0883
  Hin:  HI0023
  Rso:  RSc1999
  Atu:  AGc5061
  Sme:  SMc01014 SMc03793
  Bme:  BMEII0413 BMEII1074
  Mlo:  mll6008 mlr0906 mlr1323 mlr4422
  Ccr:  CC2999 CC3659
_______

[S] COG2302 Uncharacterized conserved protein, contains S4-like domain
  Fnu:  FN0172
  Dra:  DR0787
  Lla:  L118668
  Spy:  SPy1515
  Spn:  SP1662
  Sau:  SA1034
  Lin:  lin2134
  Bsu:  BS_ylmH
  Bha:  BH2547
  Syn:  sll1252
  Nos:  alr2890
_______

[E] COG2303 Choline dehydrogenase and related flavoproteins
  Hbs:  VNG1035C
  Mth:  MTH853
  Mja:  MJ1450
  Mka:  MK1562
  Dra:  DR0965 DRA0127
  Mtu:  Rv0492c Rv0697 Rv1279 Rv3409c
  MtC:  MT0511 MT0724 MT1316 MT3517
  Mle:  ML0389
  Sau:  SA2405
  Nos:  alr1576
  Eco:  betA
  EcZ:  ZbetA
  Ecs:  ECs0357
  Ype:  YPO1165
  Pae:  PA0364 PA2124 PA2265 PA3710 PA4100 PA5372
  Rso:  RSc0123 RSc0771 RSc3345 RSp0904 RSp1167
  Cje:  Cj0415
  Atu:  AGc1517 AGl1138 AGl1451 AGl980 AGpT129
  Sme:  SMa1414 SMa2025 SMb20496 SMb20694 SMc00093 SMc03116 SMc04390
        SMc04392
  Bme:  BMEI0025 BMEI0027 BMEI0028 BMEI0029 BMEI0388 BMEI1380 BMEI1381
        BMEII0339 BMEII0870
  Mlo:  mll1008 mll3225 mll4837 mll6785 mll7609 mll9006 mlr2604
        mlr3056 mlr3058 mlr5266 mlr6655 mlr6656 mlr6792 mlr7098
  Ccr:  CC0945 CC1278 CC1634 CC1638 CC2642
_______

[R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
  Afu:  AF1444
  Mac:  MA0247 MA2454
  Sso:  SSO1089 SSO1091
  Ape:  APE0605
  Fnu:  FN0576
  Dra:  DRA0331
  Cgl:  Cgl0992 Cgl1370 Cgl2956
  Mtu:  Rv1481
  MtC:  MT1528
  Mle:  ML1808
  Bsu:  BS_yabS BS_ywmC BS_ywmD
  Bha:  BH0079
  Syn:  sll0103
  Nos:  all1782_1 all4403_2 alr4359 alr4360 alr4412
  Eco:  yfbK
  Ype:  YPO3007
  Sty:  STM2315
  Vch:  VCA0171_1 VCA0172
  Pae:  PA3073 PA3074_1
  Mlo:  mll1222 mlr6511_1
  Bbu:  BB0172 BB0173
_______

[S] COG2306 Uncharacterized conserved protein
  Pho:  PH1613
  Pab:  PAB0381
  Dra:  DR2029
  Cgl:  Cgl1072
  Mtu:  Rv1632c
  MtC:  MT1668
  Sau:  SA0626
_______

[S] COG2307 Uncharacterized protein conserved in bacteria
  Dra:  DR2041
  Mtu:  Rv2410c Rv2567_2
  MtC:  MT2643_2 MT2483
  Mle:  ML0606 ML2679_2
  Syn:  sll1039
  Pae:  PA1731 PA4927_2
  Rso:  RSc1122
  Atu:  AGc4249 AGl1958_2
  Sme:  SMb20887 SMc04057_2
  Mlo:  mll0716 mll2876_2
  Ccr:  CC1601
_______

[S] COG2308 Uncharacterized conserved protein
  Sso:  SSO1308
  Dra:  DR2042
  Mtu:  Rv2411c Rv2567_1
  MtC:  MT2484 MT2643_1
  Mle:  ML0605 ML2679_1
  Syn:  sll0335
  Pae:  PA1730 PA4927_1
  Rso:  RSc1121
  Atu:  AGc4248 AGl1958_1
  Sme:  SMb20886 SMc04057_1
  Mlo:  mll0717 mll2876_1
  Ccr:  CC1602
_______

[E] COG2309 Leucyl aminopeptidase (aminopeptidase T)
  Hbs:  VNG0096C VNG0186G VNG2449G VNG2546G
  Mka:  MK0360
  Pho:  PH1046 PH1048
  Ape:  APE2081
  Aae:  aq_492
  Dra:  DR0236 DR0585 DR2188
  Spn:  SP0278
  Sau:  SA1695
  Lin:  lin1644 lin1823
  Bsu:  BS_ampS
  Bha:  BH2245 BH3246
  Atu:  AGc470
  Sme:  SMc00382
  Bme:  BMEI1981
  Mlo:  mll7396
  Bbu:  BB0069
_______

[T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
  Dra:  DR2217_1 DR2217_2 DR2221 DR2223_1 DR2224 DR2225 DRA0057_1
  Cac:  CAC1412 CAC1414
  Bsu:  BS_yceC BS_yceD BS_yceE
  Syn:  slr1764
  EcZ:  ZterA.2_1 ZterA_1 ZterD ZterD.2 ZterE ZterE.2 ZterF
        ZterF.2 ZterZ ZterZ.2
  Ecs:  ECs1352_1 ECs1351 ECs1355 ECs1356 ECs1358
  Ype:  YPO0294 YPO0295_1 YPO0298 YPO0299 YPO0596
_______

[S] COG2311 Predicted membrane protein
  Hbs:  VNG2097C
  Dra:  DR2253
  Cgl:  Cgl1866 Cgl2370
  Bsu:  BS_yrkO BS_yxaH
  Bha:  BH0357 BH0583 BH0756 BH1045 BH1046 BH3427 BH3693
  Eco:  yeiB
  EcZ:  Z3408
  Ecs:  ECs3044
  Ype:  YPO1506
  Sty:  STM2192
  Xfa:  XF0651
  Ccr:  CC0714
_______

[R] COG2312 Erythromycin esterase homolog
  Hbs:  VNG1811G
  Dra:  DR2257 DRA0345
  Mtu:  Rv2030c_2
  MtC:  MT2089_2
  Bsu:  BS_ybfO
  Bha:  BH2240
  Sme:  SMb20088_2
  Ccr:  CC0867
_______

[Q] COG2313 Uncharacterized enzyme involved in pigment biosynthesis
  Spo:  SPBC1861.05_1
  Tma:  TM1464
  Dra:  DR2311
  Sau:  SA0301
  Lin:  lin2434
  Eco:  yeiN
  EcZ:  ZyeiN
  Ecs:  ECs3057
  Atu:  AGc3443
  Sme:  SMc00472
  Mlo:  mll0028
_______

[S] COG2314 Predicted membrane protein
  Mac:  MA3321
  Mja:  MJ1516
  Dra:  DR2326_2
  Mtu:  Rv1615
  MtC:  MT1651
  Lla:  L50682
  Sau:  SA0892 SA1057
  Bsu:  BS_xynAa
  Bha:  BH0908
  Syn:  sll0498 sll1834
  Nos:  all2977 all3298 asl3784
  Pae:  PA0398 PA0825
  Rso:  RSc0929 RSc1614
  Bbu:  BBC08 BBI43 BBK54 BBQ01 BBU09
_______

[S] COG2315 Uncharacterized protein conserved in bacteria
  Fnu:  FN0897
  Dra:  DR2400
  Cgl:  Cgl1049
  Lla:  L35832
  Spy:  SPy1552
  Spn:  SP1259
  Lin:  lin1469 lin2819
  Bsu:  BS_yyaQ
  Eco:  ybdF yjbR
  EcZ:  ZybdF ZyjbR
  Ecs:  ECs0617 ECs5039
  Ype:  YPO0323
  Sty:  STM0579 STM4251
  Pae:  PA1995
  Rso:  RSc2592
  Atu:  AGc555
  Mlo:  mll3428
  Ccr:  CC0993
_______

[R] COG2316 Predicted hydrolase (HD superfamily)
  Afu:  AF0032
  Tma:  TM1558
  Dra:  DR2421
_______

[E] COG2317 Zn-dependent carboxypeptidase
  Hbs:  VNG2616G
  Pho:  PH0465
  Pab:  PAB1320
  Pya:  PAE0885
  Sso:  SSO3105
  Ape:  APE1775
  Fnu:  FN0061
  Dra:  DR2423
  Lin:  lin1999
  Bsu:  BS_ypwA
  Bha:  BH2149
  Ype:  YPO2310
  Vch:  VC1414
  Mlo:  mlr3932
  Rco:  RC0228
_______

[S] COG2318 Uncharacterized protein conserved in bacteria
  Dra:  DR0050 DR0053 DR2439
  Bsu:  BS_dinB BS_yisT BS_yjoA BS_yrdA
  Bha:  BH1890 BH1892 BH3115 BH3685
  Syn:  slr1116
  Pae:  PA2496
  Atu:  AGl2230
  Sme:  SMc00593
  Bme:  BMEI1257
  Mlo:  mlr7920 mlr8307
_______

[R] COG2319 FOG: WD40 repeat
  Mac:  MA0873 MA0874 MA1519 MA2525 MA2580
  Sce:  YAR003w YBL008w YBR103w YBR175w YBR195c YBR198c YBR234c
        YCL039w YCR057c YCR067c YCR072c YCR084c YDL145c YDL156w
        YDL195w YDR030c YDR128w YDR142c YDR267c YDR324c YDR364c
        YDR488c YEL056w YER066w YER082c YER107c YFL009w YFR021w
        YGL003c_1 YGL003c_2 YGL004c YGL094c_1 YGL100w YGL116w YGL137w
        YGL213c YGR145w YGR200c YGR223c YGR225w YHR186c YIL046w
        YIR012w YJL069c YJL112w_2 YKL018w YKL021c YKL121w YKL213c
        YKR036c_2 YLL011w YLR055c YLR129w YLR196w YLR208w YLR222c
        YLR409c YLR429w YML088w YML102w YMR049c YMR092c YMR093w
        YMR102c YMR116c YMR131c YMR146c YNL006w YNL035c YNL182c
        YNL253w YNL317w YNR026c YOL138c YOR026w YOR038c YOR212w
        YOR229w YOR230w YOR269w YOR272w YPL100w YPL126w YPL139c
        YPL151c YPL183c YPL247c YPR135w YPR137w YPR169w YPR178w
  Spo:  SPAC1006.02 SPAC11E3.05 SPAC12B10.03 SPAC12G12.14c SPAC13G6.08 SPAC13G7.08c SPAC144.13c
        SPAC15F9.02 SPAC17H9.19c SPAC18B11.10 SPAC1A6.02 SPAC1B3.13 SPAC227.12 SPAC22G7.04_1
        SPAC23C4.02 SPAC23H3.05c SPAC23H3.08c SPAC25H1.06 SPAC25H1.08c SPAC26H5.03 SPAC29A4.18
        SPAC29E6.01 SPAC2E1P5.05 SPAC31A2.14 SPAC343.04c SPAC343.17c SPAC3H5.08c SPAC458.06
        SPAC4D7.03 SPAC4D7.05 SPAC4F10.18 SPAC4F8.11 SPAC57A10.05c SPAC57A7.11 SPAC589.07c
        SPAC630.14c SPAC6B12.15 SPAC806.02c_2 SPAC821.08c SPAC823.16c SPAC824.04 SPAC890.04c
        SPAC959.03c SPAC9G1.05 SPAP17D4.01 SPAPB1E7.02c SPBC1198.12 SPBC1289.11 SPBC1306.02
        SPBC14C8.06 SPBC14C8.17c SPBC15D4.03 SPBC15D4.14 SPBC16A3.05c SPBC1703.06 SPBC1711.07
        SPBC1711.16 SPBC1773.01_2 SPBC17D11.08 SPBC18H10.05 SPBC18H10.06c SPBC19F5.02c SPBC1A4.07c
        SPBC215.15 SPBC21B10.05c SPBC244.03 SPBC27B12.05 SPBC28E12.06c SPBC29A3.06 SPBC2A9.03
        SPBC2G2.18 SPBC31F10.13c SPBC32F12.02 SPBC32H8.07 SPBC32H8.09 SPBC354.03 SPBC3D6.12
        SPBC3H7.01 SPBC428.19c SPBC4F6.13c SPBC577.09 SPBC609.03 SPBC6B1.10 SPBC713.04c
        SPBC713.05 SPBC855.01c SPBC887.04c SPBC8D2.20c SPBP16F5.01c_2 SPBP22H7.07 SPBPJ4664.04
        SPCC1020.09 SPCC1235.09 SPCC126.01c SPCC1620.04c SPCC1672.07 SPCC1672.10 SPCC16A11.02
        SPCC16C4.08c SPCC18.05c SPCC18B5.10c SPCC330.09_1 SPCC553.04_1 SPCC5E4.03c SPCC613.12c
        SPCC63.06 SPCC895.06
  Ecu:  ECU01g0610 ECU01g0980 ECU01g1290 ECU01g1300 ECU02g0240 ECU02g0640 ECU02g0710
        ECU02g1400 ECU02g1530 ECU03g0430 ECU03g1230 ECU03g1520 ECU04g1250 ECU04g1580
        ECU05g0060_2 ECU05g0190 ECU05g0220 ECU05g0740 ECU05g1010 ECU05g1500 ECU06g0370i
        ECU06g1550 ECU07g0750 ECU07g1020 ECU08g0210 ECU08g0310 ECU08g1110 ECU08g1180
        ECU08g1250 ECU08g1260 ECU09g1480 ECU09g1740 ECU09g1770 ECU10g0220 ECU11g1170
        ECU11g1450 ECU11g1750 ECU11g1970
  Tma:  TM1846
  Fnu:  FN0722_2
  Dra:  DR0829 DR0960 DR1725 DR2062 DR2484
  Syn:  sll0163 sll1315 sll1491 slr0143_2 slr0439 slr1409 slr1410
  Nos:  all0283_3 all0284_3 all0438_2 all0478 all0664 all0759_2 all1750
        all2124_3 all2352 all3169_2 all4759 all4834 all8544 alr0029_2
        alr0247 alr0671 alr2791_2 alr2800_2 alr3119_2 alr4559 alr4877
        alr7101 alr7129_2 alr7190_2 asl3856
  Vch:  VC0353
  Atu:  AGl735
  Sme:  SMc02979
  Bme:  BMEII0307
  Mlo:  mll2069 mll2837_3 mll5154 mlr3303_1
  Ccr:  CC0323
_______

[S] COG2320 Uncharacterized conserved protein
  Hbs:  VNG0892a
  Mac:  MA3535
  Dra:  DR2534
  Mtu:  Rv1631_2
  MtC:  MT1667_2
  Mle:  ML1383_2
  Bsu:  BS_yqkA_2
  Bha:  BH1888
  Vch:  VCA0354
  Pae:  PA4798
_______

[R] COG2321 Predicted metalloprotease
  Dra:  DR2596
  Cgl:  Cgl1598
  Mtu:  Rv0419 Rv2575
  MtC:  MT0433 MT2651
  Spy:  SPy0775
  Eco:  ypfJ
  EcZ:  Z3734
  Ecs:  ECs3337
  Ype:  YPO3058
  Sty:  STM2486
  Pae:  PA4717
  Pmu:  PM1973
  Rso:  RSc2503
  Atu:  AGc3948
  Sme:  SMc01213
  Bme:  BMEI0525
  Mlo:  mll2493
_______

[S] COG2322 Predicted membrane protein
  Hbs:  VNG0671H VNG1492C
  Aae:  aq_156
  Dra:  DR2616
  Sau:  SA0966
  Lin:  lin0659
  Bsu:  BS_yozB
  Bha:  BH2611
_______

[S] COG2323 Predicted membrane protein
  Fnu:  FN0036
  Dra:  DR0048
  Cac:  CAC0671 CAC1521 CAC3372 CAP0075 CAP0147
  Lla:  L163025
  Spn:  SP1841
  Bsu:  BS_ydfR BS_ydfS BS_yetF BS_ykjA BS_yrbG
  Bha:  BH0664 BH1232 BH1290 BH1565 BH1572 BH1758 BH1970
        BH1973 BH2201 BH2297
  Nos:  alr3394
  Eco:  ycaP
  EcZ:  ZycaP
  Ecs:  ECs0989
  Sty:  STM0976
  Sme:  SMb21362
_______

[S] COG2324 Predicted membrane protein
  Hbs:  VNG1681C
  Mth:  MTH1810
  Dra:  DR0091
  Syn:  sll0814
  Nos:  all0144
_______

[S] COG2326 Uncharacterized conserved protein
  Mac:  MA2391 MA2502
  Dra:  DR0132
  Cgl:  Cgl0893 Cgl2657
  Mtu:  Rv3232c
  MtC:  MT3329
  Syn:  slr1363
  Nos:  all2088 alr2191
  Vch:  VC0728
  Pae:  PA0141 PA2428 PA3455
  Rso:  RSc0138
  Cje:  Cj0604
  Atu:  AGc733
  Sme:  SMa0172 SMa0670 SMc02148
  Bme:  BMEI1625
  Mlo:  mll5641 mlr8387
  Ccr:  CC3416
_______

[S] COG2327 Uncharacterized conserved protein
  Mth:  MTH340
  Tma:  TM0682
  Dra:  DR0161
  Cac:  CAC3050
  Syn:  slr0688
  Nos:  all2293 alr4509
  Eco:  wcaK
  EcZ:  ZwcaK
  Ecs:  ECs2850
  Sty:  STM2101
  Atu:  AGl149 AGl2568
  Bme:  BMEII0836
_______

[R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
  Hbs:  VNG2021C_2
  Tac:  Ta0579
  Tvo:  TVN0652
  Sso:  SSO11196
  Ape:  APE1333
  Dra:  DR0272 DR0446 DR1636
  Cgl:  Cgl2621 Cgl2935
  Mtu:  Rv3592
  MtC:  MT3698
  Mle:  ML1922
  Sau:  SA0160 SA0983 SA2403
  Lin:  lin0487 lin2316
  Bsu:  BS_yczJ BS_yetG BS_yhgC BS_yqjZ
  Bha:  BH3293 BH3883
  Pae:  PA2268_2
  Rso:  RSc0282
  Atu:  AGc2463 AGc4468 AGpA263
  Sme:  SMc01518
  Bme:  BMEI0152 BMEII0706
  Mlo:  mll4602 mlr1159
_______

[S] COG2331 Uncharacterized protein conserved in bacteria
  Tma:  TM0144
  Dra:  DR0301
  Mtu:  Rv0991c
  MtC:  MT1020
  Mle:  ML0180
  Rso:  RSc0464
_______

[O] COG2332 Cytochrome c-type biogenesis protein CcmE
  Mac:  MA4149
  Dra:  DR0347
  Eco:  ccmE
  EcZ:  ZccmE
  Ecs:  ECs3086
  Ype:  YPO2738
  Sty:  STM2250 STM3815
  Vch:  VC2053
  Pae:  PA1479
  Hin:  HI1093
  Pmu:  PM0009
  Xfa:  XF2459
  Atu:  AGc1786
  Sme:  SMc02362
  Bme:  BMEI1333
  Mlo:  mlr7689
  Ccr:  CC2761
  Rpr:  RP588
  Rco:  RC0896
_______

[R] COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily)
  Hbs:  VNG6354G_1
  Dra:  DR0361 DR1854_2
  Cac:  CAC0946 CAC2622
  Lla:  L0317_2
  Spy:  SPy1408_2
  Spn:  SP0930_1 SP0955_2
  Sau:  SA1416_2
  Lin:  lin0301 lin0944_1 lin1517_2
  Bsu:  BS_comEC_2
  Bha:  BH1335_2 BH3961
  Nos:  all1983_2
  Eco:  ycaI_2
  EcZ:  ZycaI_2
  Ecs:  ECs0996_2
  Ype:  YPO1394_2
  Sty:  STM0983_2
  Vch:  VC1879_2
  Pae:  PA2984_2
  Hin:  HI0061_2
  Pmu:  PM0862_2
  Xfa:  XF1078_2
  Nme:  NMB0702_2
  NmA:  NMA0906_2
  Rso:  RSc1120_2
_______

[R] COG2334 Putative homoserine kinase type II (protein kinase fold)
  Mac:  MA2899
  Fnu:  FN0922
  Dra:  DR0394
  Bsu:  BS_yerI
  Bha:  BH3399
  Syn:  sll1119
  Eco:  yihE
  EcZ:  ZyihE
  Ecs:  ECs4782
  Ype:  YPO0014
  Sty:  STM3996
  Vch:  VC0035
  Pae:  PA0486 PA5495
  Nme:  NMB2029
  NmA:  NMA0411
  Rso:  RSc0540 RSc2233
  Atu:  AGc1416 AGpA360
  Sme:  SMa1760 SMb20973_1 SMc00017 SMc00675_1 SMc00677_1
  Bme:  BMEI1458 BMEII0132 BMEII0347_1
  Mlo:  mlr6025 mlr6716 mlr7168 mlr7503
  Ccr:  CC3364
_______

[M] COG2335 Secreted and surface protein containing fasciclin-like repeats
  Mac:  MA1723_1 MA1723_3 MA1996
  Sce:  YLR001c
  Spo:  SPAC22H12.05c
  Dra:  DR0399
  Mtu:  Rv2873 Rv2875
  MtC:  MT2940 MT2943
  Syn:  sll1483 sll1735
  Nos:  all3797 all4647 all4894 all5264 alr1320 alr1819_2
  Atu:  AGc835
  Sme:  SMa1077
  Mlo:  mll4821 mlr4813
  Ccr:  CC0414
_______

[T] COG2336 Growth regulator
  Dra:  DR0416
  Bha:  BH3720
  Nos:  asl3212
  Eco:  chpR chpS
  EcZ:  ZchpR ZchpS
  Ecs:  ECs3643 ECs5202
  Nme:  NMB0914 NMB2037
  NmA:  NMA0401
  Rso:  RSc3056
  Atu:  AGc1711
_______

[T] COG2337 Growth inhibitor
  Dra:  DR0417 DR0662
  Cac:  CAC0083 CAC0494
  Mtu:  Rv0659c Rv1102c Rv1495 Rv1942c Rv1991c Rv2801c
  MtC:  MT0688 MT1134 MT1542 MT1992 MT2046 MT2123 MT2869
  Sau:  SA1873
  Lin:  lin0887
  Bsu:  BS_ydcE
  Bha:  BH0522 BH3721
  Nos:  all0337 all3211 alr4921
  Eco:  chpA chpB
  EcZ:  ZchpA ZchpB
  Ecs:  ECs3642 ECs5203
  Xfa:  XF1862 XFa0027
  Nme:  NMB0913 NMB2038
  NmA:  NMA0400
  Atu:  AGc1712
  Sme:  SMb21475 SMb21476
  Bme:  BMEII0186
  Rco:  RC0006
_______

[S] COG2339 Predicted membrane protein
  Hbs:  VNG2625C
  Pho:  PH0065
  Pab:  PAB0037
  Dra:  DR0441
  Cgl:  Cgl0156
  Spy:  SPy1366
  Spn:  SP0026
  Sau:  SA0228
  Lin:  lin1229
  Bsu:  BS_ypdC
  Bha:  BH1625
  Nos:  all2084 alr1728 alr4305_2
_______

[S] COG2340 Uncharacterized protein with SCP/PR1 domains
  Afu:  AF0003
  Sce:  YJL078c_1 YJL079c YKR013w
  Ecu:  ECU03g0990_1
  Fnu:  FN1234
  Dra:  DR0465 DR1009 DR1442 DR1548 DR2600
  Cac:  CAC2230
  Cgl:  Cgl0671 Cgl2466
  Sau:  SA0967 SA1173
  Lin:  lin2162
  Bsu:  BS_ykwD BS_ylbC
  Bha:  BH1803_2 BH2604 BH2878
  Nos:  all1881 all1882 all3792 all3793 all4618
  Pae:  PA1139
  Atu:  AGc862
  Sme:  SMc02243
  Bme:  BMEI1613
  Mlo:  mll8234
  Ccr:  CC2118
  Bbu:  BB0689
_______

[G] COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase
  Mja:  MJ1477
  Mka:  MK1100 MK1125 MK1187
  Tma:  TM1410
  Fnu:  FN0386 FN0500
  Dra:  DR0705
  Rso:  RSc2241
_______

[S] COG2343 Uncharacterized protein conserved in bacteria
  Dra:  DR0923
  Mtu:  Rv0140 Rv1056 Rv1670
  MtC:  MT0148 MT1085 MT1708
  Syn:  slr0655 ssl3291
  Nos:  asl0060 alr4241
  Rso:  RSc0235
  Sme:  SMb21379
  Mlo:  mll2277 mll7342 mll7534 mlr9549
_______

[R] COG2344 AT-rich DNA-binding protein
  Tma:  TM0169 TM1427
  Dra:  DR0939
  Cac:  CAC2713
  Lla:  L71932
  Spy:  SPy1120
  Spn:  SP1090
  Sau:  SA1851
  Lin:  lin2178
  Bsu:  BS_ydiH
  Bha:  BH0551
_______

[K] COG2345 Predicted transcriptional regulator
  Tac:  Ta0201 Ta1186
  Tvo:  TVN1392 TVN1422
  Dra:  DR0999
  Cgl:  Cgl1159 Cgl1528
  Mtu:  Rv1460 Rv2618 Rv2621c
  MtC:  MT1507 MT2693 MT2696
  Mle:  ML0592
  Bha:  BH3429
  Syn:  sll0088
  Nos:  all2491
  Ype:  YPO4077
  Vch:  VC2666
_______

[R] COG2346 Truncated hemoglobins
  Dra:  DR1002
  Cgl:  Cgl2394
  Mtu:  Rv1542c Rv2470
  MtC:  MT1594 MT2546
  Mle:  ML1253
  Sau:  SA0861
  Bsu:  BS_yjbI
  Bha:  BH2854
  Syn:  slr2097
  Rso:  RSc2090
  Cje:  Cj0465c
  Atu:  AGc428 AGc4317
  Sme:  SMc01520 SMc02351
  Bme:  BMEII0398
  Mlo:  mlr0267
  Ccr:  CC3056
_______

[V] COG2348 Uncharacterized protein involved in methicillin resistance
  Mac:  MA3846
  Dra:  DR1062
  Spy:  SPy0615 SPy0616 SPy1205
  Spn:  SP0615 SP0616
  Sau:  SA1091 SA1206 SA1207 SA2057 SA2199
  Tpa:  TP0806
  Bbu:  BB0586
_______

[S] COG2350 Uncharacterized protein conserved in bacteria
  Fnu:  FN0584
  Dra:  DR1071
  Cac:  CAP0038
  Cgl:  Cgl1920
  Bsu:  BS_yjpA
  Syn:  ssl2595
  Nos:  all7347 asr4959
  Eco:  yciI
  EcZ:  ZyciI
  Ecs:  ECs1751
  Ype:  YPO1733 YPO2192
  Sty:  STM1738
  Vch:  VC1702
  Pae:  PA3202
  Hin:  HI0828
  Pmu:  PM0327
  Nme:  NMB0343
  NmA:  NMA2144
  Rso:  RSp0019
  Atu:  AGc4590 AGc4802
  Sme:  SMc03228
  Bme:  BMEI0173
  Mlo:  mlr3009 msr4226
  Ccr:  CC0069
_______

[R] COG2351 Transthyretin-like protein
  Spo:  SPCC285.04
  Dra:  DR1161
  Bsu:  BS_yunM
  Bha:  BH0760
  Eco:  yedX
  EcZ:  Z3062
  Ecs:  ECs2708
  Sty:  STM1097
  Pae:  PA1518
  Rso:  RSc2116
  Cje:  Cj0715
  Atu:  AGc4223
  Sme:  SMb20872 SMb21285
  Bme:  BMEI1429
  Mlo:  mlr5133
  Ccr:  CC2620
_______

[C] COG2352 Phosphoenolpyruvate carboxylase
  Dra:  DR1283
  Cgl:  Cgl1547
  Mle:  ML0578
  Spy:  SPy0608
  Spn:  SP1068
  Syn:  sll0920
  Nos:  all4861
  Eco:  ppc
  EcZ:  Zppc
  Ecs:  ECs4885
  Ype:  YPO3929
  Sty:  STM4119
  Vch:  VC2646
  Pae:  PA3687
  Hin:  HI1636
  Pmu:  PM0546
  Nme:  NMB2061
  NmA:  NMA0374
  Rso:  RSc2358
  Ccr:  CC1493
_______

[S] COG2353 Uncharacterized conserved protein
  Tac:  Ta0132 Ta1230
  Tvo:  TVN0211 TVN0365
  Dra:  DR1287
  Cgl:  Cgl1144 Cgl1441
  Mtu:  Rv1890c
  MtC:  MT1940
  Sau:  SA2479
  Lin:  lin0789
  Eco:  yceI
  EcZ:  ZyceI
  Ecs:  ECs1434
  Ype:  YPO2315
  Sty:  STM1157 STM1621
  Vch:  VCA0539
  Pae:  PA0423
  Xfa:  XF1086 XF1327 XF1329 XF1840
  Nme:  NMB1030
  NmA:  NMA1457
  Rso:  RSc0790 RSc2717 RSc2718 RSp1238
  Hpy:  HP1286
  jHp:  jhp1206
  Cje:  Cj0420
  Atu:  AGc2742
  Sme:  SMc01021
  Mlo:  mll5048
  Ccr:  CC2119 CC2609 CC3391_2 CC3392
_______

[S] COG2354 Uncharacterized protein conserved in bacteria
  Dra:  DR1297
  Cgl:  Cgl1064
  Mtu:  Rv3092c
  MtC:  MT3176.1
  Eco:  yedI
  EcZ:  ZyedI
  Ecs:  ECs2696
  Sty:  STM1989
  Vch:  VCA0930
  Pae:  PA1857
  Nme:  NMB0714
  Bme:  BMEII0811
  Ccr:  CC1436
_______

[E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog
  Pho:  PH0975 PH1026
  Pab:  PAB2388
  Pya:  PAE0005
  Sso:  SSO1864
  Ape:  APE0337
  Spo:  SPAC3A11.10c SPCC965.12
  Dra:  DR1346
  Lin:  lin2556
  Bha:  BH2271
  Pae:  PA2393 PA5396
  Rso:  RSp0056
  Atu:  AGc4575 AGl875
  Sme:  SMb20384 SMc01524 SMc03264 SMc03267
  Bme:  BMEII0626
  Mlo:  mll3679 mlr6286
  Ccr:  CC2746
  Ctr:  CT138
  Cpn:  CPn0269
_______

[L] COG2356 Endonuclease I
  Dra:  DR1600
  Bsu:  BS_yurI
  Eco:  endA
  EcZ:  ZendA
  Ecs:  ECs3821
  Ype:  YPO0933
  Sty:  STM3093
  Buc:  BU409
  Vch:  VC0470
  Pae:  PA2749
_______

[S] COG2357 Uncharacterized protein conserved in bacteria
  Fnu:  FN0926
  Dra:  DR1631
  Cac:  CAC0642 CAC3340
  Cgl:  Cgl1151 Cgl2067
  Mtu:  Rv1366
  MtC:  MT1412
  Lla:  L166082 L96605
  Spy:  SPy0873 SPy1125
  Spn:  SP1097
  Sau:  SA0864 SA2297
  Lin:  lin0794 lin0966
  Bsu:  BS_yjbM BS_ywaC
  Bha:  BH1885 BH2849
_______

[R] COG2358 TRAP-type uncharacterized transport system, periplasmic component
  Afu:  AF0467 AF0635 AF0988
  Hbs:  VNG0540G
  Ape:  APE2136 APE2545
  Dra:  DR1649
  Bha:  BH0601 BH2937 BH2947
  Syn:  sll1037
  Vch:  VC0430 VCA0144
  Pae:  PA3848 PA5545
  Pmu:  PM0472 PM1578
  Sme:  SMb20292
  Bme:  BMEI0796
  Rpr:  RP197
  Rco:  RC0259
_______

[S] COG2359 Uncharacterized protein conserved in bacteria
  Tma:  TM0192 TM0897 TM1059
  Dra:  DR1661
  Cac:  CAC1750 CAC1817
  Bsu:  BS_spoVS
  Bha:  BH2375
_______

[O] COG2360 Leu/Phe-tRNA-protein transferase
  Dra:  DR1713
  Syn:  sll0869
  Nos:  all3967
  Eco:  aat
  EcZ:  Zaat
  Ecs:  ECs0970
  Ype:  YPO1371
  Sty:  STM0955
  Vch:  VC1735
  Pae:  PA2617
  Xfa:  XF1446
  Nme:  NMB0206
  NmA:  NMA0063
  Rso:  RSc1617
  Cje:  Cj1109
  Atu:  AGc2449
  Sme:  SMc01346
  Bme:  BMEI1064
  Mlo:  mll0202
  Ccr:  CC1885
_______

[S] COG2361 Uncharacterized conserved protein
  Mac:  MA0101 MA0767 MA1296 MA2130
  Mja:  MJ0125 MJ0127 MJ0434_1 MJ1216 MJ1380
  Dra:  DR0248_2 DR0680 DR1807
  Syn:  sll1411 sll1505
  Nme:  NMB1264
  Atu:  AGc4225A
  Ccr:  CC3079
_______

[E] COG2362 D-aminopeptidase
  Pho:  PH1582
  Pab:  PAB1969
  Ape:  APE0314
  Dra:  DR1843
  Lin:  lin0201
  Bsu:  BS_dppA
  Rso:  RSc1384
  Mlo:  mll6661
_______

[S] COG2363 Uncharacterized small membrane protein
  Spo:  SPAC1782.12c
  Dra:  DR1864
  Sau:  SA0540
  Lin:  lin0671
  Bsu:  BS_ywdK
  Bha:  BH3828
  Nos:  alr3204
  Eco:  ygdD
  EcZ:  ZygdD
  Ecs:  ECs3667
  Ype:  YPO1030
  Sty:  STM2981
  Vch:  VC0897
  Pae:  PA0379
  Hin:  HI1073
  Pmu:  PM0770
  Atu:  AGc4318
  Sme:  SMc01519
  Bme:  BMEI1310
  Mlo:  mll8379
  Ccr:  CC1231
_______

[S] COG2364 Predicted membrane protein
  Dra:  DR1875
  Cac:  CAC0198
  Cgl:  Cgl0007
  Bsu:  BS_yczE BS_yyaS
  Bha:  BH1258 BH3078
  Hin:  HI0522
  Pmu:  PM1293
_______

[T] COG2365 Protein tyrosine/serine phosphatase
  Sce:  YCR095c YDR067c YNL032w YNL056w YNL099c
  Spo:  SPBC17A3.03c
  Dra:  DR1912
  Mtu:  Rv0153c
  MtC:  MT0162
  Lla:  L87497
  Lin:  lin1914 lin2049
  Ype:  YPO3785
  Pae:  PA3885
  Rso:  RSp1469
  Atu:  AGc2266 AGc3912
  Ccr:  CC0306 CC2955
_______

[R] COG2366 Protein related to penicillin acylase
  Afu:  AF0487
  Tac:  Ta0676 Ta1462
  Tvo:  TVN1200
  Pya:  PAE3124
  Sso:  SSO1460 SSO1638
  Ape:  APE0336
  Dra:  DRA0255
  Syn:  slr0378
  Nos:  all3924
  Pae:  PA0305 PA1032 PA1893 PA2385
  Rso:  RSc2547
  Bme:  BMEII0211 BMEII0212
  Ccr:  CC1025 CC1122
_______

[V] COG2367 Beta-lactamase class A
  Fnu:  FN1584
  Dra:  DR0433 DR1985 DRA0241
  Cac:  CAC0190
  Mtu:  Rv2068c Rv3593
  MtC:  MT2128 MT3699
  Mle:  ML1923
  Lla:  L22496
  Spy:  SPy0012
  Spn:  SP0010
  Sau:  SAP010
  Lin:  lin0199
  Bsu:  BS_penP
  Syn:  slr0121
  Nos:  all4822_2 alr4543
  Atu:  AGl2891
  Sme:  SMa1952 SMa1953 SMc00047 SMc02026
_______

[Q] COG2368 Aromatic ring hydroxylase
  Afu:  AF0333 AF0885 AF1027
  Pya:  PAE2693
  Sso:  SSO2053 SSO2503 SSO2738
  Dra:  DRA0223
  Bsu:  BS_yoaI
  Bha:  BH3836
  Ype:  YPO1769
  Sty:  STM1099
  Pae:  PA2256 PA4091
  Pmu:  PM1523
_______

[S] COG2369 Uncharacterized protein, homolog of phage Mu protein gp30
  Mja:  MJ0329
  Dra:  DRA0097
  Lin:  lin1730
  Ecs:  ECs4971
  Hin:  HI1407 HI1502
  Xfa:  XF1574 XF1679
  Nme:  NMB1096_1
  NmA:  NMA1315_1 NMA1850_1
_______

[O] COG2370 Hydrogenase/urease accessory protein
  Aae:  aq_666
  Dra:  DRA0317
  Syn:  slr2135
  Nos:  alr4717
  Pae:  PA4894
  Rso:  RSc2034
  Atu:  AGc4126
  Mlo:  mll4945
_______

[O] COG2371 Urease accessory protein UreE
  Dra:  DRA0314
  Cgl:  Cgl0087
  Sau:  SA2085
  Bha:  BH0255
  Syn:  slr1219
  Nos:  alr0733
  EcZ:  ZureE ZureE.2
  Ecs:  ECs1325
  Ype:  YPO2668
  Pae:  PA4891
  Hin:  HI0538
  Rso:  RSc2031
  Hpy:  HP0070
  jHp:  jhp0065
  Atu:  AGc4352
  Sme:  SMc01832
  Bme:  BMEI0646 BMEI1651
  Mlo:  mll4937
  Uur:  UU431
_______

[R] COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC
  Dra:  DRA0299
  Cgl:  Cgl1634
  Lin:  lin2168_1
  Bsu:  BS_ycnJ_1
  Bha:  BH2291
  Eco:  yobA
  EcZ:  Z2889
  Ecs:  ECs2551
  Ype:  YPO1784
  Sty:  STM1875
  Rso:  RSp0658
  Sme:  SMa1198_1
  Mlo:  mll3323_1
_______

[R] COG2373 Large extracellular alpha-helical protein
  Tma:  TM0984
  Fnu:  FN0579
  Dra:  DRA0293
  Nos:  all5100
  Eco:  yfaS+R yfhM
  EcZ:  Z3481 Z3787
  Ecs:  ECs3111 ECs3386
  Ype:  YPO2573
  Sty:  STM2532
  Pae:  PA4489
  Pmu:  PM0659
  Xfa:  XF1252
  Rso:  RSc3030
  Atu:  AGl2284
  Sme:  SMb21298
  Mlo:  mlr1663
  Ccr:  CC3571
  Rpr:  RP558 RP559
  Rco:  RC0835
_______

[R] COG2374 Predicted extracellular nuclease
  Dra:  DRB0067_2
  Cgl:  Cgl2538_1
  Spy:  SPy0747
  Syn:  sll0656_2
  Nos:  alr0276_2
  Vch:  VC2621
  Pae:  PA3909
  Tpa:  TP0544
_______

[P] COG2375 Siderophore-interacting protein
  Dra:  DRB0017 DRB0124
  Cgl:  Cgl0039 Cgl0645 Cgl0784 Cgl1219 Cgl1416
  Mtu:  Rv1348_1 Rv2895c
  MtC:  MT1390_1 MT2963
  Eco:  yqjH
  EcZ:  ZyqjH
  Ecs:  ECs3952
  Sty:  STM3214
  Vch:  VC2210
  Pae:  PA2033
  Rso:  RSp0257
  Atu:  AGc4456 AGpA448
  Sme:  SMa1740
_______

[G] COG2376 Dihydroxyacetone kinase
  Sce:  YFL053w YML070w
  Spo:  SPAC22A12.11 SPAC977.16c
  Fnu:  FN1840 FN1841
  Dra:  DRB0053
  Lla:  L44063 L45677 L46694
  Sau:  SA0605 SA0606
  Lin:  lin0365 lin0366 lin2843 lin2844
  Bha:  BH3393 BH3396 BH3397
  Eco:  ycgS ycgT
  EcZ:  Z1970 Z1971
  Ecs:  ECs1704 ECs1705
  Ype:  YPO3349 YPO3350
  Pmu:  PM1648 PM1649
  Atu:  AGl2580
  Sme:  SMb20307 SMb20312_2 SMb20313 SMb20314 SMb20767
  Bme:  BMEI0396 BMEI0397 BMEI0398_2 BMEI0399
  Mlo:  mll5289 mll5295 mll5296 mll7278 mll7280 mlr9018
_______

[O] COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases
  Mka:  MK0840
  Dra:  DRA0212
  Syn:  slr1179
  Nos:  all4520
  Eco:  ydhH
  EcZ:  Z2654
  Ecs:  ECs2349
  Ype:  YPO2372
  Sty:  STM1446
  Vch:  VC0691
  Pae:  PA0666
  Hin:  HI0753
  Pmu:  PM1831
  Xfa:  XF0166
  Nme:  NMB0377
  NmA:  NMA2111
  Rso:  RSc0495
  Atu:  AGc3353
  Sme:  SMc00527
  Bme:  BMEI1046
  Mlo:  mll7241
  Ccr:  CC1869
_______

[K] COG2378 Predicted transcriptional regulator
  Fnu:  FN1249
  Dra:  DR0055
  Cac:  CAC3494
  Cgl:  Cgl1456 Cgl1457
  Mtu:  Rv2095c Rv2096c
  MtC:  MT2156 MT2157
  Mle:  ML1329 ML1330
  Sau:  SA2105
  Lin:  lin0383 lin0395 lin0464 lin2535
  Bsu:  BS_yobV
  Bha:  BH0411 BH1889
  Eco:  yafY yfjR
  Sty:  STM0410
  Vch:  VC1772
  Pae:  PA1467
  Xfa:  XF1630
  NmA:  NMA1157
  Rso:  RSc2673
  Cje:  Cj0571
  Atu:  AGc1585 AGc1603 AGpA393
  Sme:  SMc00107 SMc02902
  Bme:  BMEI0305
  Mlo:  mll3208 mll4985 mlr3764
  Ccr:  CC1095 CC2312
_______

[G] COG2379 Putative glycerate kinase
  Tac:  Ta0453m
  Tvo:  TVN0783
  Pho:  PH0495
  Pab:  PAB1021
  Pya:  PAE1309
  Sso:  SSO0666
  Ape:  APE0996
  Tma:  TM1585
  Dra:  DR1157
  Pae:  PA1499
  Rso:  RSc0486 RSp1449
  Atu:  AGl3166 AGpAbx66
  Sme:  SMa1406 SMb20678 SMc04389
  Bme:  BMEI1570
  Mlo:  mlr5146
_______

[S] COG2380 Uncharacterized protein conserved in bacteria
  Aae:  aq_977
  Tma:  TM1739
  Dra:  DR0836
_______

[P] COG2382 Enterochelin esterase and related enzymes
  Dra:  DR2506
  Cac:  CAP0071_1
  Cgl:  Cgl2422
  Sau:  SA0872
  Lin:  lin0976
  Bsu:  BS_yjcH
  Bha:  BH1440
  Eco:  fes yieL
  EcZ:  Z1191 Z1631 Zfes
  Ecs:  ECs0624 ECs1371
  Sty:  STM0586 STM2775
  Pae:  PA2451
_______

[S] COG2383 Uncharacterized conserved protein
  Mja:  MJ0067
  Pho:  PH1115
  Pab:  PAB7281
  Ape:  APE1529
  Dra:  DR0193
_______

[R] COG2384 Predicted SAM-dependent methyltransferase
  Dra:  DR0276
  Cac:  CAC1302
  Lla:  L84257
  Spy:  SPy0930
  Spn:  SP1610
  Sau:  SA1389
  Lin:  lin1490
  Bsu:  BS_yqfN
  Bha:  BH1379
  Vch:  VCA0634
  Uur:  UU350
  Mpn:  MPN351
  Mge:  MG248
_______

[D] COG2385 Sporulation protein and related proteins
  Fnu:  FN0806
  Dra:  DR0572
  Cac:  CAC2506_1 CAC2861
  Bsu:  BS_lytB_2 BS_spoIID
  Bha:  BH3648_2 BH3748
  Syn:  sll0252 sll1283 slr0191
  Nos:  alr1605 alr4147
_______

[O] COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component
  Afu:  AF0983
  Mac:  MA1429
  Dra:  DR0407
  Eco:  ccmB
  EcZ:  ZccmB
  Ecs:  ECs3089
  Ype:  YPO2735
  Sty:  STM2253 STM3818
  Vch:  VC2056
  Pae:  PA1476
  Hin:  HI1090
  Pmu:  PM0006
  Xfa:  XF2456
  Atu:  AGc4870
  Sme:  SMc03848
  Bme:  BMEI1852
  Mlo:  mll4332
  Ccr:  CC3669
_______

[R] COG2388 Predicted acetyltransferase
  Afu:  AF0345
  Ape:  APE0900
  Fnu:  FN1391
  Dra:  DR1844
  Cgl:  Cgl2321 Cgl2510
  Lla:  L86554
  Sau:  SA2309
  Lin:  lin0181
  Eco:  yjdJ
  EcZ:  ZyjdJ
  Ecs:  ECs5109
  Vch:  VCA0043
  Pae:  PA1749
  Pmu:  PM0090
  Atu:  AGc4412
  Sme:  SMc00656
  Bme:  BMEI0426
  Mlo:  msl3681
  Ccr:  CC0893
_______

[R] COG2389 Uncharacterized metal-binding protein
  Mac:  MA1926
  Aae:  aq_2157
  Dra:  DR1889
  Syn:  sll0924
  Nos:  alr0511
_______

[K] COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
  Dra:  DR1935
  Cac:  CAC0708
  Lla:  L0037
  Spy:  SPy2053
  Spn:  SP0247
  Sau:  SA0726
  Lin:  lin0551 lin2104 lin2554
  Bsu:  BS_deoR BS_yvbQ
  Bha:  BH0780 BH3561
  Eco:  ydeW yjhU
  EcZ:  Z5619 ZydeW
  Ecs:  ECs2119 ECs5004
  Ype:  YPO1810 YPO2324 YPO3310 YPO3348
  Sty:  STM4073
  Vch:  VCA0621
  Pmu:  PM1273 PM1646
  Rso:  RSc2127
  Atu:  AGc3494 AGl1935 AGl814 AGl843
  Sme:  SMb20312_1 SMb20501 SMb20619 SMb20851 SMb21021 SMc01495 SMc01629
        SMc03123
  Bme:  BMEI0398_1 BMEII0427
  Mlo:  mll3409 mll3605 mll4931 mll7290 mlr7259
_______

[R] COG2391 Predicted transporter component
  Hbs:  VNG6061H VNG6062H VNG6464H VNG6465H VNG7044 VNG7046 VNG7164
        VNG7165
  Mka:  MK0262
  Tac:  Ta0467 Ta0679
  Tvo:  TVN0472 TVN0476 TVN0965
  Pya:  PAE2635
  Sso:  SSO1462 SSO3085
  Tma:  TM0982
  Dra:  DRA0162 DRA0163
  Sau:  SA1850
  Eco:  yedE yeeE
  EcZ:  ZyedE ZyeeE
  Ecs:  ECs2668 ECs2815
  Ype:  YPO0274
  Sty:  STM1965
  Vch:  VCA0640 VCA0641
  Pae:  PA3631 PA5430
  Xfa:  XF0765 XF0766
  Rso:  RSc0437 RSc0438 RSc0739
  Cje:  Cj1500
  Atu:  AGl2723 AGl2724
  Sme:  SMa1052 SMa1053 SMb21550
  Bme:  BMEII0808 BMEII0809
  Mlo:  mlr2160 msr8615
_______

[R] COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain
  Afu:  AF1064
  Mka:  MK0520
  Pho:  PH1507
  Pab:  PAB1929
  Ape:  APE2272
  Ype:  YPMT1.26c YPMT1.27c
_______

[R] COG2402 Predicted nucleic acid-binding protein, contains PIN domain
  Afu:  AF0300 AF1683
  Hbs:  VNG0072H VNG6166H VNG6396H
  Pab:  PAB0786 PAB1599
  Pya:  PAE2676
  Aae:  aq_aa03
  Mtu:  Rv0582 Rv2549c
  Syn:  sll1715
  Nos:  alr0683
_______

[R] COG2403 Predicted GTPase
  Mth:  MTH223
  Mka:  MK0505
  Pho:  PH0578
  Pab:  PAB0938 PAB2252
  Pya:  PAE3146
  Ape:  APE1971
  Syn:  sll0572
_______

[R] COG2404 Predicted phosphohydrolase (DHH superfamily)
  Hbs:  VNG2519H
  Mac:  MA4172
  Sso:  SSO2457
  Ape:  APE0124
  Fnu:  FN1601
  Bsu:  BS_yngD
  Hpy:  HP1042
  jHp:  jhp0382
  Cje:  Cj0881c
_______

[R] COG2405 Predicted nucleic acid-binding protein, contains PIN domain
  Afu:  AF0099 AF0598
  Ape:  APE0276 APE0890
  Syn:  sll0658
  Nos:  all2804
_______

[R] COG2406 Protein distantly related to bacterial ferritins
  Mac:  MA2882
  Mth:  MTH474
  Pya:  PAE2701
  Sso:  SSO2079
  Ape:  APE1457
  Tma:  TM0560
_______

[G] COG2407 L-fucose isomerase and related proteins
  Pho:  PH1462
  Pab:  PAB1900
  Pya:  PAE1173 PAE3580
  Ape:  APE1887
  Tma:  TM0307 TM0951
  Cac:  CAC2610
  Spn:  SP2158
  Eco:  fucI
  EcZ:  ZfucI
  Ecs:  ECs3662
  Ype:  YPO3311
  Sty:  STM2976
  Hin:  HI0614
_______

[R] COG2409 Predicted drug exporters of the RND superfamily
  Tac:  Ta0470
  Tvo:  TVN0985
  Pya:  PAE2290
  Sso:  SSO0466
  Ape:  APE2500
  Dra:  DR0108
  Cac:  CAC3431 CAP0102
  Cgl:  Cgl0232 Cgl0608 Cgl0900 Cgl2807
  Mtu:  Rv0202c Rv0206c Rv0402c Rv0450c Rv0507 Rv0676c Rv1145
        Rv1146 Rv1183 Rv1522c Rv1557 Rv2339 Rv2942 Rv3823c
  MtC:  MT0212 MT0216 MT0412 MT0466 MT0528 MT0705 MT1220
        MT1573 MT1608 MT1802 MT2402 MT3012 MT3931
  Mle:  ML0137 ML1231 ML2378 ML2617 ML2620
  Sau:  SA2339
  Lin:  lin1189 lin2557
  Bsu:  BS_ydfJ BS_ydgH
_______

[S] COG2410 Uncharacterized conserved protein
  Afu:  AF1103
  Mth:  MTH1199
  Mka:  MK0145
  Pya:  PAE2091
  Sso:  SSO2591
  Ape:  APE0097
_______

[S] COG2411 Uncharacterized conserved protein
  Afu:  AF1523 AF1812
  Mka:  MK1577
  Pho:  PH0448 PH1656
  Pab:  PAB1311 PAB2020
  Pya:  PAE0638 PAE2152
  Ape:  APE0116
_______

[S] COG2412 Uncharacterized conserved protein
  Afu:  AF2325
  Hbs:  VNG2470C
  Mac:  MA0680
  Mka:  MK0968
  Tac:  Ta0800
  Tvo:  TVN1031
  Pho:  PH0989
  Pab:  PAB1715
  Sso:  SSO2382
  Ape:  APE0132
_______

[R] COG2413 Predicted nucleotidyltransferase
  Afu:  AF1979
  Mka:  MK0982 MK1464
  Pho:  PH0007
  Pab:  PAB0004
  Sso:  SSO0086
  Ape:  APE0213
_______

[C] COG2414 Aldehyde:ferredoxin oxidoreductase
  Afu:  AF0023 AF0077 AF0340 AF2281
  Mac:  MA1714 MA2962 MA3989
  Mja:  MJ1185
  Tac:  Ta0810 Ta0834 Ta1142
  Tvo:  TVN0795 TVN1239
  Pho:  PH0028 PH0457 PH0891 PH0892 PH1019 PH1274
  Pab:  PAB0647 PAB0798 PAB1315 PAB2085 PAB2330
  Pya:  PAE0622 PAE1029 PAE2052 PAE3427
  Ape:  APE0266
  Cac:  CAC2018
  Eco:  ydhV
  EcZ:  Z2701
  Ecs:  ECs2380
_______

[S] COG2419 Uncharacterized conserved protein
  Afu:  AF0031
  Mka:  MK1026
  Pho:  PH0711
  Pab:  PAB0880
  Pya:  PAE0001
  Sso:  SSO1087
  Ape:  APE0498
_______

[C] COG2421 Predicted acetamidase/formamidase
  Pho:  PH1041
  Pab:  PAB0614
  Sso:  SSO2810
  Ape:  APE0528
  Spo:  SPAC869.04
  Tma:  TM0119
  Lin:  lin2752
  Bha:  BH0025
  Nos:  all0706
  Sme:  SMc04290
  Ccr:  CC2611
_______

[E] COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog
  Afu:  AF1665
  Hbs:  VNG1364G VNG2224G
  Mac:  MA3252
  Mth:  MTH1495
  Mka:  MK1411
  Tac:  Ta0480
  Tvo:  TVN0824
  Pya:  PAE2445
  Sso:  SSO0378 SSO3243
  Ape:  APE0916
  Sce:  YGL159w
  Spo:  SPAP11E10.01
  Cgl:  Cgl1544
  Sau:  SA0113
  Ype:  YPO4090
  Pae:  PA3862 PA4908
  Rso:  RSc3352 RSp0418 RSp0483
  Atu:  AGl1687 AGl1691 AGl1807 AGl247 AGpT54
  Sme:  SMa0486 SMa1871 SMb20433 SMb21494
  Bme:  BMEII0397
  Mlo:  mll6776 mlr1729 mlr2282 mlr3204 mlr7139
_______

[R] COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
  Mac:  MA0253 MA2199
  Mja:  MJ0077 MJ0811
  Mka:  MK0479
  Pya:  PAE2059 PAE2899
  Sso:  SSO2360
  Ape:  APE1031
  Eco:  yieM
  EcZ:  ZyieM
  Ecs:  ECs4687
  Ype:  YPO0004
  Sty:  STM3878
  Vch:  VCA0762
_______

[S] COG2426 Predicted membrane protein
  Afu:  AF1696
  Pho:  PH1658
  Pab:  PAB2022
  Ape:  APE1041
  Bha:  BH1234
_______

[S] COG2427 Uncharacterized conserved protein
  Afu:  AF0272 AF0558 AF1717
  Tac:  Ta0424 Ta1125 Ta1412
  Tvo:  TVN0244 TVN1207 TVN1431
  Pya:  PAE2619 PAE2833
  Sso:  SSO1119 SSO2259 SSO2632 SSO2822
  Ape:  APE1042
  Sau:  SA2101
  Lin:  lin2730
  Bsu:  BS_yjgD BS_yjlC BS_yrhD
_______

[S] COG2428 Uncharacterized conserved protein
  Mka:  MK0095
  Pho:  PH1577
  Pab:  PAB0401
  Ape:  APE1363
  Sce:  YOR021c
_______

[S] COG2429 Uncharacterized conserved protein
  Hbs:  VNG1011Cm VNG1021C
  Mth:  MTH1017
  Mja:  MJ0145
  Pya:  PAE2984
  Sso:  SSO0399
  Ape:  APE1365
_______

[S] COG2430 Uncharacterized conserved protein
  Afu:  AF1545
  Mac:  MA1719
  Pho:  PH0335
  Pab:  PAB1280
  Pya:  PAE3212
  Ape:  APE1442 APE1868
_______

[S] COG2431 Predicted membrane protein
  Pho:  PH0673
  Pab:  PAB0910
  Pya:  PAE1479
  Sso:  SSO2175
  Ape:  APE1477
  Fnu:  FN1083
  Eco:  ybjE
  EcZ:  ZybjE
  Ecs:  ECs0960
  Ype:  YPO1361
  Sty:  STM0938
  Vch:  VC1151
  Hin:  HI1452
  Pmu:  PM0465
  Nme:  NMB1562
  NmA:  NMA1750
_______

[S] COG2433 Uncharacterized conserved protein
  Afu:  AF2427
  Hbs:  VNG2238C
  Mac:  MA2517
  Mth:  MTH838 MTH839
  Mka:  MK0407
  Pho:  PH0620
  Pab:  PAB1429
  Pya:  PAE0678
  Sso:  SSO0198
  Ape:  APE1599
_______

[C] COG2440 Ferredoxin-like protein
  Tac:  Ta0327
  Tvo:  TVN1279
  Pya:  PAE0723
  Sso:  SSO11114 SSO11231
  Ape:  APE2460
  Tma:  TM1533
  Fnu:  FN1545
  Eco:  fixX ydiT ygcO
  EcZ:  Z4077 ZfixX ZydiT
  Ecs:  ECs0047 ECs2407 ECs3622
  Sty:  STM0078 STM1351
  Sme:  SMa0816
  Mlo:  msl5859
_______

[C] COG2441 Predicted butyrate kinase
  Afu:  AF0850
  Pho:  PH0228
  Pab:  PAB0142
  Sso:  SSO0214
  Ape:  APE2481
_______

[S] COG2442 Uncharacterized conserved protein
  Pho:  PHS008
  Sso:  SSO2736
  Ape:  APES076
  Mtu:  Rv2018 Rv2308
  MtC:  MT2074 MT2366
  Syn:  slr0770 slr1209 ssl2733 ssr2962
  Nos:  alr1493 alr1892 alr5160 asl2403 asr1559 asr2172 asr2958
        asr3960 asr4133 asr4560 alr5180
  Xfa:  XF2030
_______

[U] COG2443 Preprotein translocase subunit Sss1
  Afu:  AF0536
  Hbs:  VNG0375G
  Mac:  MA4272
  Mth:  MTH1677
  Mja:  MJ0371
  Mka:  MK0822
  Tac:  Ta1426m
  Tvo:  TVN1444
  Pho:  PH0002a
  Pab:  PAB3002
  Ape:  APE2176a
  Sce:  YDR086c
  Spo:  SPAC4G8.02c
  Ecu:  ECU05g0885
_______

[S] COG2445 Uncharacterized conserved protein
  Afu:  AF0947 AF2169 AF2433
  Mac:  MA0174 MA1852 MA4417
  Mth:  MTH304 MTH409 MTH463
  Mja:  MJ1548
  Pab:  PAB1546 PAB2339
  Pya:  PAE0028_1 PAE0165 PAE1869 PAE1949 PAE2032 PAE2506_1 PAE2759
        PAE2870
  Aae:  aq_1668
  Sau:  SA0789
  Bsu:  BS_yutE
  Bha:  BH3430
_______

[S] COG2450 Uncharacterized conserved protein
  Afu:  AF0782
  Hbs:  VNG2644C
  Mac:  MA3884
  Mth:  MTH1838
  Mja:  MJ0919
  Mka:  MK0034
  Tac:  Ta0155m
  Tvo:  TVN0225
  Pho:  PH1781
  Pab:  PAB2117
_______

[J] COG2451 Ribosomal protein L35AE/L33A
  Mka:  MK0155
  Pho:  PHS052
  Pab:  PAB7092
  Ape:  APE2324
  Sce:  YOR234c YPL143w
  Spo:  SPBC1921.01c SPCP31B10.08c
  Ecu:  ECU02g0900
_______

[L] COG2452 Predicted site-specific integrase-resolvase
  Mja:  MJ0014
  Tac:  Ta0563
  Tvo:  TVN0765 TVN1223
  Pab:  PAB2076
  Sso:  SSO0836 SSO1073 SSO1181 SSO1217 SSO1335 SSO1349 SSO1497
        SSO1564 SSO1658 SSO1760 SSO1830 SSO1915 SSO1927 SSO1964
        SSO2943 SSO3154 SSO3171 SSO9134 SSO9135 SSO9270 SSO9368
  Mtu:  Rv0605 Rv0921 Rv2792c Rv2886c Rv2979c Rv3828c
  MtC:  MT0633 MT0948 MT2862 MT2954 MT3057 MT3936
  Nos:  asr7146 asr7152
  Xfa:  XF0325 XF0535
_______

[T] COG2453 Predicted protein-tyrosine phosphatase
  Mac:  MA1867 MA2385
  Mja:  MJ0215 MJECL20
  Pho:  PH1732
  Pab:  PAB0279
  Pya:  PAE1536
  Sso:  SSO2453
  Sce:  YBR276c_2 YFR028c_1 YIL113w YIR026c YNL053w YNL128w
  Spo:  SPAC1782.09c SPBC1685.01 SPBC17A3.06 SPBC609.02
  Dra:  DR2161
  Cgl:  Cgl1674
  Nos:  all4761
  Eco:  ynbD_2
  EcZ:  ZynbD_2
  Ecs:  ECs2013_2
  Ype:  YPO2813_2
  Vch:  VC1070
  Pae:  PA2539_2
_______

[S] COG2454 Uncharacterized conserved protein
  Mac:  MA3253
  Mth:  MTH1687 MTH1688
  Mja:  MJ0935
  Mka:  MK0174
  Pho:  PH1730
  Pab:  PAB2059
  Sso:  SSO0340
  Cac:  CAC1606
_______

[S] COG2456 Uncharacterized conserved protein
  Mth:  MTH137
  Mja:  MJ1580
  Pho:  PH1586
  Pab:  PAB1972
_______

[S] COG2457 Uncharacterized conserved protein
  Afu:  AF1834
  Mac:  MA0695
  Mth:  MTH863
  Mja:  MJ1453
  Mka:  MK0195
  Pho:  PH1326
  Pab:  PAB1814
  Sso:  SSO0724
_______

[S] COG2461 Uncharacterized conserved protein
  Afu:  AF0170
  Pab:  PAB1709
  Tma:  TM1002 TM1004
  Fnu:  FN1655
  Cac:  CAC1531
  Lla:  L52568
  Spn:  SP0562 SP1472_2
  Bha:  BH0228
_______

[S] COG2469 Uncharacterized conserved protein
  Afu:  AF1043
  Hbs:  VNG0964C VNG0965C
  Mac:  MA3069
  Mja:  MJ1615
  Pho:  PH0494
  Pab:  PAB1338
_______

[S] COG2501 Uncharacterized conserved protein
  Fnu:  FN2129
  Dra:  DR1391
  Cac:  CAC0003
  Cgl:  Cgl0147
  Lla:  L34138
  Spy:  SPy2203
  Spn:  SP2226
  Sau:  SA0003
  Lin:  lin0004
  Bsu:  BS_yaaA
  Bha:  BH0003
  Nos:  asl3253
  Eco:  ybcJ
  EcZ:  ZybcJ
  Ecs:  ECs0590
  Ype:  YPO2825
  Sty:  STM0541
  Vch:  VCA0582
  Nme:  NMB1826
  NmA:  NMA0633
  Rso:  RSc0789
  Uur:  UU080
  Mpu:  MYPU_0030
_______

[E] COG2502 Asparagine synthetase A
  Fnu:  FN0776
  Spy:  SPy1539
  Spn:  SP1970
  Eco:  asnA
  EcZ:  ZasnA
  Ecs:  ECs4686
  Ype:  YPO0003
  Sty:  STM3877
  Hin:  HI0564
  Pmu:  PM1574
  Tpa:  TP0556
  Uur:  UU363
_______

[R] COG2503 Predicted secreted acid phosphatase
  Spy:  SPy1882
  Sau:  SA0295
  Nos:  all7324
  Hin:  HI0693
  Pmu:  PM1064
  Hpy:  HP1285
  jHp:  jhp1205
  Uur:  UU526_2
_______

[TQ] COG2508 Regulator of polyketide synthase expression
  Dra:  DRA0217
  Cac:  CAC1426 CAC3236 CAP0121
  Cgl:  Cgl0471 Cgl2446
  Mtu:  Rv1186c Rv1194c Rv1429 Rv1453 Rv2242 Rv2370c
  MtC:  MT1223 MT1231 MT1472 MT1500 MT2302 MT2439
  Mle:  ML1052 ML1652
  Lla:  L26721
  Spy:  SPy1978
  Spn:  SP0593
  Lin:  lin0472 lin2875
  Bsu:  BS_ycgP BS_yukF BS_yunI BS_yxkF
  Bha:  BH0757 BH1072 BH1141 BH1735 BH1994_2
  Pae:  PA1915
  Atu:  AGpA324
_______

[R] COG2509 Uncharacterized FAD-dependent dehydrogenases
  Afu:  AF0654
  Mac:  MA2677
  Mka:  MK0501
  Pho:  PH0303
  Pab:  PAB1091
  Pya:  PAE0983
  Sso:  SSO0244
  Tma:  TM0600
  Fnu:  FN0904
  Cac:  CAC3077 CAC3595
  Lla:  L195271
  Bha:  BH1470
  Syn:  sll0175
  Vch:  VC0806
  Ccr:  CC1423
_______

[S] COG2510 Predicted membrane protein
  Mth:  MTH630
  Mja:  MJ1333.1
  Mka:  MK0670
  Pho:  PH1270
  Pab:  PAB0665
  Nos:  alr2616
  Ype:  YPO2687
  Pae:  PA5444
  Nme:  NMB1840
  NmA:  NMA0616
  Atu:  AGl3039
  Bme:  BMEI0697
_______

[J] COG2511 Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain)
  Afu:  AF1440
  Hbs:  VNG1352G
  Mac:  MA2862
  Mth:  MTH707
  Mja:  MJ0019
  Mka:  MK0129
  Tac:  Ta0971
  Tvo:  TVN1117
  Pho:  PH1464
  Pab:  PAB1902
  Pya:  PAE3222
  Sso:  SSO0936
  Ape:  APE2202
_______

[S] COG2512 Uncharacterized membrane-associated protein/domain
  Afu:  AF0999
  Mac:  MA1985 MA2546 MA2574 MA3601
  Tac:  Ta1503
  Tvo:  TVN1203
  Pho:  PH0614_2 PH0804 PH0995
  Pab:  PAB0661 PAB0953_2 PAB1544
  Pya:  PAE0146 PAE0640 PAE3650
  Sso:  SSO3103
  Ape:  APE1711
_______

[G] COG2513 PEP phosphonomutase and related enzymes
  Tac:  Ta1227
  Tvo:  TVN0368
  Pya:  PAE1716 PAE1872
  Sso:  SSO2587
  Ape:  APE0222
  Cgl:  Cgl0638 Cgl0675 Cgl1036
  Mtu:  Rv1998c
  MtC:  MT2054
  Lin:  lin0067
  Bsu:  BS_yqiQ
  Bha:  BH3922
  Nos:  all1863
  Eco:  prpB
  EcZ:  ZprpB
  Ecs:  ECs0385
  Sty:  STM0368
  Vch:  VC1336
  Pae:  PA0796 PA3682 PA4872
  Xfa:  XF1234
  Nme:  NMB0430
  NmA:  NMA2055
  Rso:  RSc1448 RSc2000 RSp0122
  Sme:  SMc01727 SMc02687
  Mlo:  mll2772 mll5340 mlr5882 mlr9115
  Ccr:  CC1903
_______

[R] COG2514 Predicted ring-cleavage extradiol dioxygenase
  Pya:  PAE2685
  Ape:  APE2519
  Dra:  DR1764
  Cgl:  Cgl2035
  Spy:  SPy2103
  Spn:  SP0073
  Sau:  SA1037 SA2310
  Lin:  lin0649
  Bsu:  BS_yfiE
  Bha:  BH2142 BH3305
  Atu:  AGc1468 AGc1648
  Sme:  SMc00115
  Bme:  BMEI1118
  Mlo:  mlr0078
_______

[E] COG2515 1-aminocyclopropane-1-carboxylate deaminase
  Pho:  PH0054
  Pab:  PAB2303
  Spo:  SPAC922.03
  Tma:  TM0225
  Nos:  alr4447
  Eco:  yedO
  EcZ:  ZyedO
  Ecs:  ECs2657 ECs2658
  Ype:  YPO1845
  Sty:  STM1953
  Vch:  VC1743
  Rso:  RSp0646
  Cje:  Cj0600
  Mlo:  mlr5932
  Ccr:  CC2032
_______

[R] COG2516 Biotin synthase-related enzyme
  Mac:  MA0436
  Pho:  PH0234
  Pab:  PAB2355
  Sso:  SSO1115
  Aae:  aq_1958
  Tma:  TM0243
  Syn:  sll0785
_______

[R] COG2517 Predicted RNA-binding protein containing a C-terminal EMAP domain
  Afu:  AF0375
  Mth:  MTH975
  Mka:  MK0983
  Pho:  PH0536
  Pab:  PAB1368
_______

[O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase
  Afu:  AF0036 AF2322
  Hbs:  VNG0089G
  Mac:  MA0543 MA0544
  Mth:  MTH827
  Mja:  MJ0172
  Mka:  MK0282
  Pho:  PH1886
  Pab:  PAB1206
  Pya:  PAE0701
  Sso:  SSO2599
  Ape:  APE1011
  Spo:  SPAC869.08
  Tma:  TM0704
  Eco:  pcm
  EcZ:  Zpcm
  Ecs:  ECs3597
  Ype:  YPO3357
  Sty:  STM2926
  Vch:  VC0532
  Pae:  PA3624
  Xfa:  XF0857 XF2585
  Nme:  NMB1885
  NmA:  NMA0572
  Rso:  RSc0697 RSc1205
  Hpy:  HP0363
  jHp:  jhp1017
  Cje:  Cj0228c
  Atu:  AGc3127 AGc3159
  Sme:  SMa1547 SMb20088_1 SMc02062 SMc02083
  Bme:  BMEI1030 BMEI1080
  Mlo:  mll1078 mll1108 mll2628 mlr2502 mlr9350
  Ccr:  CC1317 CC1997
_______

[J] COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases
  Afu:  AF0216
  Hbs:  VNG0425G
  Mth:  MTH1414
  Mja:  MJ0134
  Mka:  MK1415
  Tac:  Ta0852
  Tvo:  TVN0955
  Pho:  PH1858
  Pab:  PAB0283
  Pya:  PAE2166
  Sso:  SSO0427
  Ape:  APE2486
  Sce:  YJL125c
  Spo:  SPAC9G1.12
  Aae:  aq_311
  Tma:  TM0748
  Cgl:  Cgl1462
  Mtu:  Rv2118c
  MtC:  MT2178
  Mle:  ML1313
_______

[R] COG2520 Predicted methyltransferase
  Afu:  AF0704 AF1973
  Hbs:  VNG1117C VNG2475C
  Mac:  MA0613 MA1651 MA2064
  Mth:  MTH1200 MTH1873
  Mja:  MJ0883 MJ1557
  Mka:  MK0599 MK0940
  Tac:  Ta0836 Ta0926
  Tvo:  TVN0815 TVN1074
  Pho:  PH0115 PH0793 PH1416
  Pab:  PAB0505 PAB1538 PAB2272
  Pya:  PAE1486
  Sso:  SSO2223 SSO2439
  Ape:  APE0815 APE1106
  Sce:  YHR070w YML005w
  Spo:  SPAC4G8.06c
  Ecu:  ECU04g0620
_______

[R] COG2521 Predicted archaeal methyltransferase
  Mja:  MJ1233
  Mka:  MK0595
  Pho:  PH1028
  Pab:  PAB1736
  Pya:  PAE0636
  Ape:  APE0964
  Xfa:  XF0811
_______

[R] COG2522 Predicted transcriptional regulator
  Afu:  AF0184 AF0566
  Hbs:  VNG0247C_1
  Mac:  MA2719 MA4060
  Pho:  PH0716_1
  Pab:  PAB0668 PAB0877_1
  Pya:  PAE1205 PAE2210_1
  Sso:  SSO0468_1 SSO0931
  Ape:  APE0776
_______

[K] COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains
  Afu:  AF0111
  Hbs:  VNG0890G
  Mac:  MA1391
  Mth:  MTH126
  Mja:  MJ1232
  Pya:  PAE3319
  Sso:  SSO0110
  Ape:  APE0974
_______

[V] COG2602 Beta-lactamase class D
  Sau:  SA0039_2 SAP011_2
  Bsu:  BS_ybxI
  Syn:  slr0319
  Nos:  all2480
  Pae:  PA5514
  Rso:  RSp0030
  Cje:  Cj0299
  Atu:  AGc1700
  Mlo:  mll0916
  Rco:  RC1243 RC1244
_______

[R] COG2603 Predicted ATPase
  Mja:  MJ0052 MJ0053
  Eco:  ybbB
  EcZ:  ZybbB
  Ecs:  ECs0564
  Sty:  STM0513
  Pae:  PA1643
  Cje:  Cj0500
_______

[S] COG2604 Uncharacterized protein conserved in bacteria
  Cac:  CAC2168 CAC2196 CAC2200 CAC2202
  Hpy:  HP0114 HP0465
  jHp:  jhp0106 jhp0417
  Cje:  Cj1318 Cj1333 Cj1334 Cj1335 Cj1336 Cj1337 Cj1340c
        Cj1341c
  Tpa:  TP0175
_______

[R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase
  Tac:  Ta0344m Ta1304
  Tvo:  TVN0504 TVN0888
  Cac:  CAC3055
  Mtu:  Rv0115
  MtC:  MT0123
  Syn:  slr0862
  Cje:  Cj1425c
_______

[S] COG2606 Uncharacterized conserved protein
  Pya:  PAE1677
  Ape:  APE2540
  Fnu:  FN0673 FN1373
  Cgl:  Cgl0364
  Mtu:  Rv3224a
  Mle:  ML0799
  Lla:  L115671
  Spy:  SPy0599
  Spn:  SP0985
  Sau:  SA0652
  Lin:  lin0783
  Bsu:  BS_yjdI BS_ywhH
  Nos:  all0659
  Eco:  ybaK yeaK
  EcZ:  ZybaK ZyeaK
  Ecs:  ECs0534 ECs2496
  Ype:  YPO3088
  Sty:  STM0495 STM1282 STM4549
  Vch:  VC2172
  Pae:  PA1357 PA2301 PA3580 PA5346_1
  Hin:  HI1434
  Pmu:  PM0485
  Nme:  NMB1026
  NmA:  NMA1462
  Rso:  RSc0260 RSc2545 RSc2911
  Atu:  AGc159 AGc472
  Sme:  SMc00385 SMc01705 SMc02318
  Bme:  BMEII0708
  Mlo:  mlr1045 mlr8433
  Ccr:  CC0963
_______

[R] COG2607 Predicted ATPase (AAA+ superfamily)
  Aae:  aq_336
  Cac:  CAC3262
  Syn:  slr0930
  Nos:  all2461
  Pae:  PA2823
  Nme:  NMB1246
  NmA:  NMA1415
  Rso:  RSc2832
  Cje:  Cj1084c
  Atu:  AGc2880
  Sme:  SMc02059
  Bme:  BMEI1078
  Mlo:  mlr1073
  Ccr:  CC1993
_______

[P] COG2608 Copper chaperone
  Afu:  AF0346
  Hbs:  VNG0702H VNG2581H
  Mac:  MA1326 MA1336 MA1337 MA1338
  Tac:  Ta1342
  Tvo:  TVN0252
  Sso:  SSO11412
  Ape:  APE0009
  Sce:  YMR038c YNL259c
  Spo:  SPAC22E12.04 SPBC1709.10c
  Aae:  aq_1840a
  Tma:  TM0320 TM0529
  Fnu:  FN0244 FN0259
  Dra:  DR2452
  Cac:  CAC0302 CAC1554_1 CAC3654
  Cgl:  Cgl1149 Cgl2901 Cgl2911 Cgl2918 Cgl3012 Cgl3020
  Lla:  L134080 L45583
  Spy:  SPy1714
  Sau:  SA2345
  Lin:  lin1966
  Bsu:  BS_yvgY
  Bha:  BH0556
  Syn:  ssr2857
  Nos:  asl2417 asl3721 asr7638
  Sty:  STM0355
  Pae:  PA3520
  Hin:  HI0291 HI0292 HI1050
  Pmu:  PM1213 PM1891
  Nme:  NMB1271
  NmA:  NMA1476
  Rso:  RSc3349
  Hpy:  HP1073
  jHp:  jhp0352
  Atu:  AGc1710 AGc2220
  Sme:  SMa1009 SMb20560
  Bme:  BMEI1032
  Uur:  UU202
_______

[C] COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component
  Dra:  DR0257
  Cgl:  Cgl2195
  Mtu:  Rv2241
  MtC:  MT2301
  Mle:  ML1651
  Eco:  aceE
  EcZ:  ZaceE
  Ecs:  ECs0118
  Ype:  YPO3419
  Sty:  STM0152
  Buc:  BU205
  Vch:  VC2414
  Pae:  PA5015
  Hin:  HI1233
  Pmu:  PM0895
  Xfa:  XF0669
  Nme:  NMB1341
  NmA:  NMA1554
  Rso:  RSc1600
  Mlo:  mlr9539
  Ccr:  CC1205
_______

[GE] COG2610 H+/gluconate symporter and related permeases
  Mac:  MA0021
  Fnu:  FN0225 FN0554 FN0815
  Cac:  CAC2835 CAC3605
  Cgl:  Cgl2846
  Spy:  SPy1641
  Sau:  SA2293
  Bsu:  BS_gntP BS_yojA BS_yxjC
  Bha:  BH0805 BH3897
  Eco:  dsdX gntP gntT gntU idnT ygbN yjhF
  EcZ:  Z3627 ZgntP ZgntT ZgntU
  Ecs:  ECs4257 ECs4285 ECs5280
  Ype:  YPO0767 YPO3954 YPO3979
  Sty:  STM0860 STM2913 STM3512 STM3541 STM3801 STM4482
  Vch:  VC0286 VCA0904
  Pae:  PA1051 PA2004 PA2322
  Hin:  HI0092 HI1015
  Pmu:  PM0793 PM1359 PM1740
  Nme:  NMB2027
  NmA:  NMA0413
  Rso:  RSc2518 RSp1189
_______

[P] COG2703 Hemerythrin
  Mja:  MJ0747
  Aae:  aq_1719
  Cac:  CAC0069
  Vch:  VC1216_1
  Pae:  PA1673
  Rso:  RSc0777
  Cje:  Cj0045c Cj0241c Cj1224
_______

[R] COG2704 Anaerobic C4-dicarboxylate transporter
  Cac:  CAC3500
  Eco:  dcuA dcuB
  EcZ:  ZdcuA ZdcuB
  Ecs:  ECs5105 ECs5119
  Ype:  YPO0347
  Sty:  STM3599 STM4301 STM4325
  Vch:  VC2699 VCA0205
  Hin:  HI0153 HI0746
  Pmu:  PM1434 PM1918
  Hpy:  HP0724
  jHp:  jhp0660
  Cje:  Cj0088 Cj0671
_______

[G] COG2706 3-carboxymuconate cyclase
  Spo:  SPBC18E5.01
  Cac:  CAC0086
  Lla:  L11851
  Spn:  SP1506
  Sau:  SA1737
  Lin:  lin0567
  Bsu:  BS_ykgB
  Eco:  ybhE
  EcZ:  ZybhE
  Ecs:  ECs0795
  Ype:  YPO1149
  Sty:  STM0785
  Buc:  BU293
  Pae:  PA4204
  Rso:  RSc0049 RSp0183
_______

[S] COG2707 Predicted membrane protein
  Cac:  CAC0092
  Lin:  lin1603
  Bsu:  BS_ytwI
  Bha:  BH3161
  Eco:  yeaL
  EcZ:  ZyeaL
  Ecs:  ECs2498
  Ype:  YPO3057
  Sty:  STM1280
  Hin:  HI1074
  Pmu:  PM0771
  Nme:  NMB0327
  NmA:  NMA2160
_______

[C] COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains
  Mac:  MA1208 MA1210 MA1216 MA1218 MA1219 MA1220 MA1631
        MA1632 MA2032_2 MA2033 MA3628 MA3898 MA3899 MA3900
        MA3901
  Mth:  MTH1482 MTH1522 MTH1563 MTH1564 MTH1565 MTH1566
  Mja:  MJ1423
  Mka:  MK1385
  Fnu:  FN0304
  Cac:  CAC0256 CAC0257 CAC0258 CAC0259_1
  Syn:  slr0750 slr0772
  Nos:  all1437 all1438 all1440 all1454 all5076 alr3441
  Sme:  SMa0827 SMa0829 SMa0830 SMa0873
  Mlo:  mlr5906 mlr5907 mlr5908 mlr5909
_______

[R] COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis.
  Cac:  CAC0469
  Bsu:  BS_spmA
  Bha:  BH1574
  Syn:  sll1677
  Pae:  PA5478_1
  Rso:  RSc0452_1
_______

[E] COG2716 Glycine cleavage system regulatory protein
  Eco:  gcvR
  EcZ:  ZgcvR
  Ecs:  ECs3341
  Ype:  YPO3063
  Sty:  STM2490
  Vch:  VC1249 VC2159
  Pae:  PA0484 PA1009
  Xfa:  XF0962
  Ccr:  CC3046
_______

[S] COG2717 Predicted membrane protein
  Dra:  DR2537
  Cac:  CAC0200 CAC0555
  Nos:  alr4711_2
  Eco:  yedZ
  EcZ:  Z3064
  Ecs:  ECs2710
  Ype:  YPO3661
  Sty:  STM3378
  Pae:  PA4691
  Pmu:  PM0538
  Rso:  RSc2980
  Cje:  Cj0378c
  Atu:  AGc3512
  Sme:  SMc01282
  Bme:  BMEII0304
  Ccr:  CC2747
  Tpa:  TP0572_1
_______

[S] COG2718 Uncharacterized conserved protein
  Hbs:  VNG0746C
  Cac:  CAC0580
  Bsu:  BS_yhbH
  Bha:  BH1031
  Eco:  yeaH
  EcZ:  ZyeaH
  Ecs:  ECs2493
  Ype:  YPO2152
  Sty:  STM1284
  Vch:  VC1873
  Pae:  PA0587
  Sme:  SMc01266
  Mlo:  mll9637
_______

[S] COG2719 Uncharacterized conserved protein
  Hbs:  VNG0745G
  Cac:  CAC0581
  Bsu:  BS_spoVR
  Bha:  BH1112
  Eco:  ycgB
  EcZ:  ZycgB
  Ecs:  ECs1683
  Ype:  YPO2145
  Sty:  STM1804
  Vch:  VC1874
  Pae:  PA0586
  Sme:  SMc01265
  Mlo:  mll9636
_______

[V] COG2720 Uncharacterized vancomycin resistance protein
  Dra:  DR0009 DR0025 DR1619
  Cac:  CAC0691
  Cgl:  Cgl2791
  Bsu:  BS_yoaR
  Bha:  BH1596
  Pae:  PA0749
_______

[G] COG2721 Altronate dehydratase
  Tac:  Ta1392 Ta1393
  Sso:  SSO1259 SSO1260
  Cac:  CAC0696
  Bsu:  BS_ycbH BS_yjmJ
  Bha:  BH0490
  Eco:  uxaA yhaG
  EcZ:  ZuxaA ZyhaG
  Ecs:  ECs3973 ECs4006
  Ype:  YPO0581
  Sty:  STM0649 STM0650 STM3250
  Rso:  RSp0830 RSp1615
  Cje:  Cj0482 Cj0483
  Atu:  AGc5115 AGl2029
  Sme:  SMc02776
  Bme:  BMEII0485
  Mlo:  mlr3330
  Ccr:  CC1488
_______

[G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
  Tac:  Ta1323
  Tvo:  TVN0685
  Pho:  PH0366 PH0501
  Pab:  PAB1740 PAB2376
  Pya:  PAE1736
  Sso:  SSO3019
  Cac:  CAC0385 CAC0743 CAC1084 CAC1405 CAC1408 CAC2963 CAP0010
  Cgl:  Cgl2783
  Lla:  L119614 L121426 L179659 L22116 L32812 L89194
  Spy:  SPy0574 SPy1328 SPy1599 SPy1916
  Spn:  SP0265 SP0303 SP0477 SP0578 SP1184 SP2021
  Sau:  SA0256 SA1991
  Lin:  lin0017 lin0288 lin0297 lin0328 lin0344 lin0391 lin0583
        lin0918 lin2904
  Bsu:  BS_bglA BS_bglH BS_yckE BS_ydhP
  Bha:  BH0182 BH0596 BH1923 BH3918
  Eco:  ascB bglA bglB
  EcZ:  ZascB ZbglA
  Ecs:  ECs3572 ECs3773
  Ype:  YPO1254
  Sty:  STM3051 STM3775
  Vch:  VC1558
  Atu:  AGl770
  Sme:  SMc03160
  Ccr:  CC2136
_______

[G] COG2730 Endoglucanase
  Pho:  PH1171
  Pab:  PAB0632
  Sce:  YBR056w YDR261c YLR300w YOR190w
  Spo:  SPAC12B10.11 SPBC1105.05 SPBC2D10.05
  Tma:  TM1751 TM1752
  Cac:  CAC0706 CAC0825 CAC0826 CAC0910 CAC0912_1 CAC3469_2
  Bsu:  BS_bglC
  Bha:  BH0603
  Nos:  alr0290_1
  Xfa:  XF0810_1 XF0818 XF2708
  Rso:  RSp0162
_______

[G] COG2731 Beta-galactosidase, beta subunit
  Fnu:  FN1134
  Cac:  CAC0836
  Spn:  SP1327 SP1680 SP1691
  Eco:  ebgC yhcH yiaL yjgK
  EcZ:  ZebgC ZyhcH ZyjgK
  Ecs:  ECs3959 ECs4094 ECs5229
  Ype:  YPO2541 YPO3019 YPO3447
  Sty:  STM3080 STM3335 STM3669 STM4468
  Vch:  VC1555
  Hin:  HI0227
  Pmu:  PM1255 PM1713
  Hpy:  HP1029
  jHp:  jhp0395
  Mpu:  MYPU_6600
_______

[K] COG2732 Barstar, RNAse (barnase) inhibitor
  Cac:  CAC0844
  Bsu:  BS_yrdF
  Eco:  yhcO
  EcZ:  ZyhcO
  Ecs:  ECs4112
  Ype:  YPO3690
  Sty:  STM3363
  Nme:  NMB0646
_______

[S] COG2733 Predicted membrane protein
  Cac:  CAC1095 CAC1096
  Cgl:  Cgl0372
  Mtu:  Rv0473
  MtC:  MT0490
  Eco:  yjiN
  EcZ:  ZyjiN
  Ecs:  ECs5299
  Sty:  STM4516
  Xfa:  XF1278
  Mlo:  mll1146
_______

[R] COG2738 Predicted Zn-dependent protease
  Tma:  TM1511
  Dra:  DR0194
  Cac:  CAC1724
  Sau:  SA1293
  Lin:  lin2033
  Bsu:  BS_yugP
  Bha:  BH0997 BH1677
_______

[S] COG2739 Uncharacterized protein conserved in bacteria
  Fnu:  FN1394
  Cac:  CAC1753
  Lla:  L57401
  Spy:  SPy1201
  Spn:  SP1288
  Sau:  SA1079
  Lin:  lin1916
  Bsu:  BS_ylxM
  Bha:  BH2485
  Uur:  UU142
  Mpu:  MYPU_6730
  Mpn:  MPN424
_______

[K] COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination
  Fnu:  FN2021_1
  Dra:  DR1798
  Cac:  CAC1800
  Cgl:  Cgl1940
  Mtu:  Rv2840c
  MtC:  MT2906
  Mle:  ML1557
  Lla:  L175136
  Spy:  SPy1723
  Spn:  SP0554
  Sau:  SA1110
  Lin:  lin1360
  Bsu:  BS_ylxR
  Bha:  BH2415
  Nos:  asr3830
  Hpy:  HP1049
  jHp:  jhp0376
  Cje:  Cj0135
  Atu:  AGc134
  Sme:  SMc02913
  Bme:  BMEI1966
  Mlo:  mlr5553
  Ccr:  CC0043
  Uur:  UU319
  Mpu:  MYPU_2040
_______

[V] COG2746 Aminoglycoside N3'-acetyltransferase
  Dra:  DR0599 DR2034
  Cac:  CAC2197
  Lin:  lin1820
  Bsu:  BS_yokD
  Nos:  alr1528
  Cje:  Cj1296 Cj1297 Cj1298
  Sme:  SMc02813
  Mlo:  mlr6282_2
_______

[KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor)
  Aae:  aq_357a
  Tma:  TM0085
  Cac:  CAC2214
  Bsu:  BS_flgM
  Bha:  BH3623
  Eco:  flgM
  EcZ:  ZflgM
  Ecs:  ECs1449
  Ype:  YPO1797
  Sty:  STM1172
  Vch:  VC2204
  Pae:  PA3351
  Rso:  RSp0340
_______

[E] COG2755 Lysophospholipase L1 and related esterases
  Sso:  SSO3052
  Sce:  YOR126c
  Spo:  SPCC126.10
  Cac:  CAC2619 CAC3024 CAC3448
  Mtu:  Rv1075c
  MtC:  MT1105
  Mle:  ML0466
  Lla:  L115789 L161059 L99502
  Spy:  SPy1115 SPy1492
  Spn:  SP1450
  Lin:  lin0495 lin0749 lin1976
  Bsu:  BS_ycsK BS_yesT BS_yesY BS_ypmR BS_yqeF BS_yxiM_2
  Bha:  BH1115_2 BH3963_2
  Syn:  slr1119
  Nos:  all0976 all1288 alr1529 alr1792
  Eco:  tesA
  EcZ:  ZtesA
  Ecs:  ECs0558
  Ype:  YPO3080
  Sty:  STM0506
  Vch:  VCA0783
  Pae:  PA2856 PA3125 PA3750
  Pmu:  PM1710
  Nme:  NMB1674
  NmA:  NMA1480 NMA1932
  Rso:  RSc1717 RSp1245
  Cje:  Cj0609c
  Atu:  AGc2642 AGc4857 AGl2749 AGpA668
  Sme:  SMa1993 SMa2002 SMc01033 SMc03836
  Bme:  BMEI1861
  Mlo:  mlr0387 mlr3756 mlr4086 mlr4347
  Ccr:  CC0812 CC1760 CC2152
_______

[F] COG2759 Formyltetrahydrofolate synthetase
  Tac:  Ta1478
  Tvo:  TVN0089
  Sce:  YBR084w_2 YGR204w_2
  Spo:  SPBC2G2.08_2 SPBC839.16_2
  Tma:  TM1766
  Fnu:  FN2082
  Cac:  CAC3201
  Lla:  L159505
  Spy:  SPy1213 SPy2085
  Spn:  SP1229
  Sau:  SA1553
  Lin:  lin1990
  Vch:  VCA0614
  Nme:  NMB1839
  NmA:  NMA0617
  Sme:  SMc02728
  Mlo:  mlr2763
  Uur:  UU221
_______

[Q] COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
  Hbs:  VNG0170Cm
  Sso:  SSO1074
  Dra:  DR0659
  Cac:  CAC3447
  Cgl:  Cgl2513
  Sau:  SA0860
  Lin:  lin0963
  Bsu:  BS_yjbH BS_ywbO
  Bha:  BH1902 BH2855
  Vch:  VCA0178
  Xfa:  XF2135
  Rso:  RSp0909
  Atu:  AGc3262 AGpA16
  Sme:  SMc00952
  Bme:  BMEII0690
  Mlo:  mlr0515
  Ccr:  CC1843
_______

[S] COG2764 Uncharacterized protein conserved in bacteria
  Cac:  CAC1525 CAC3689
  Cgl:  Cgl1051 Cgl2760
  Mtu:  Rv0887c
  MtC:  MT0910
  Lla:  L136968
  Sau:  SA2378
  Lin:  lin0813 lin1207 lin1676 lin2872
  Bha:  BH0850 BH2083
  Nos:  alr7163
  Eco:  phnB
  EcZ:  ZphnB
  Ecs:  ECs5089
  Sty:  STM4288
  Pae:  PA0803 PA1353
  Rso:  RSc0107 RSc2762 RSp0601
  Sme:  SMa2009 SMc01148_2 SMc03093
  Mlo:  mlr1197 mlr1599 mlr2640 mlr5539
  Ccr:  CC1279
_______

[T] COG2766 Putative Ser protein kinase
  Hbs:  VNG0748G VNG0749G
  Cac:  CAC0579
  Bsu:  BS_prkA
  Bha:  BH1029
  Eco:  yeaG
  EcZ:  ZyeaG
  Ecs:  ECs2492
  Ype:  YPO2153
  Sty:  STM1285
  Vch:  VC1872
  Pae:  PA0588
  Sme:  SMc01267
  Mlo:  mll9638
_______

[R] COG2768 Uncharacterized Fe-S center protein
  Afu:  AF1153
  Mac:  MA0367 MA3446
  Mth:  MTH1826
  Tma:  TM0034
  Cac:  CAC3464
_______

[T] COG2770 FOG: HAMP domain
  Afu:  AF1503_2 AF1620_2
  Mac:  MA1739_2 MA2555_2
  Aae:  aq_1825
  Dra:  DR1829_2
  Bsu:  BS_resE_2
  Syn:  slr0829_1 slr1860_2
  Nos:  all2260 alr1121_1 alr1883_2
  Vch:  VC1295_2 VC2750_2
  Pae:  PA0172_2 PA0847_2
  Rso:  RSp0012_1 RSp0253_1 RSp0254_1
  Atu:  AGl3494_1
  Sme:  SMb20450_2
  Mlo:  mll2385_1 mll6700_2
_______

[K] COG2771 DNA-binding HTH domain-containing proteins
  Mka:  MK1587_1
  Pya:  PAE3163
  Dra:  DR2312_1 DRC0012
  Cac:  CAC0445_1
  Cgl:  Cgl2343 Cgl2356 Cgl2507
  Mtu:  Rv0339c_2 Rv0386_3 Rv0890c_2 Rv1358_3 Rv2488c_3
  MtC:  MT0353_2 MT0399_3 MT0914_2 MT1402_3 MT2563_3
  Mle:  ML1753_3
  Lla:  L0226
  Sau:  SA0299_1
  Lin:  lin2435_1
  Bsu:  BS_gerE
  Bha:  BH2118_2 BH3075
  Syn:  ssl0564
  Nos:  all3447 all4978_2 all7016_2 alr7522_2 asl2551
  Eco:  csgD rcsA sdiA yahA_1 yeiI_1 yhiE yhiF
        ykgK yqeH
  EcZ:  Z0392 Z4184 ZcsgD ZrcsA ZsdiA ZyahA_1 ZyeiI_1
        ZyhiE ZyhiF ZykgK ZyqeH
  Ecs:  ECs0324 ECs0352 ECs0363_1 ECs1417 ECs2654 ECs2690 ECs3052_1
        ECs3703 ECs3720 ECs4378 ECs4392
  Ype:  YPO0985 YPO2449 YPO2457 YPO2593 YPO2955
  Sty:  PSLT012 STM0347 STM0552 STM1142 STM1265 STM1950 STM1982
        STM2866 STM3025 STM3124 STM3756 STM4314 STM4337
  Vch:  VC0396 VC0464 VCA0888 VCA0952 VCA1078_2
  Pae:  PA0533_2 PA1136 PA1430 PA1484 PA1898 PA2591 PA3477
        PA3599 PA3771 PA4074 PA4806
  Rso:  RSc1569 RSc1895 RSc3287 RSc3373 RSp0778 RSp0851 RSp0983
        RSp1096 RSp1141 RSp1142 RSp1192 RSp1470 RSp1512 RSp1579
  Atu:  AGc1279 AGc3081 AGc3566 AGc3670_2 AGc4154 AGc4942 AGc926
        AGc927 AGl329_2 AGl3540_2 AGpT249 AGpT32
  Sme:  SMb20405 SMc00170 SMc00658 SMc00877 SMc00878 SMc01630 SMc03015
        SMc03016 SMc03896 SMc04032
  Bme:  BMEI1758 BMEII1116
  Mlo:  mll1934 mll1989_2 mll2000_1 mll2414 mll4526_2 mll5244 mll5392_3
        mll6760_2 mll6877 mll8752 mll9138_2 mlr2896 mlr2897 mlr5637
        mlr6102 mlr9176 mlr9544 msl4031
  Ccr:  CC0782 CC1080 CC2921
_______

[L] COG2801 Transposase and inactivated derivatives
  Afu:  AF0309 AF1071 AF1310 AF1383 AF1410 AF1705
  Mac:  MA0351 MA0399 MA0579 MA1034 MA1116 MA1125 MA1379
        MA1434 MA1890 MA1930 MA2020 MA2187 MA2189 MA2836
        MA2931 MA2940 MA2983 MA3158 MA3841 MA4057 MA4463
        MA4483
  Tac:  Ta1408
  Tvo:  TVN0692 TVN0867 TVN1427
  Sce:  YGR109w-b_2 YIL082w-a_2
  Spo:  SPAC13D1.01c SPAC13D1.02c SPAC167.08 SPAC26A3.13c SPAC27E2.08 SPAC2E1P3.03c SPAC9.04
        SPBC1289.17 SPCC1020.14
  Fnu:  FN0137 FN0138 FN0139 FN0486 FN0787 FN0841 FN1442
        FN1447 FN1530 FN1680 FN1888 FN1889
  Dra:  DRA0075 DRB0019.2
  Cgl:  Cgl0239 Cgl0698 Cgl0874 Cgl0875 Cgl0880 Cgl0881 Cgl1485
        Cgl1687 Cgl1834 Cgl1835 Cgl2580 Cgl2704 Cgl2885 Cgl2886_2
  Mtu:  Rv0796 Rv1369c Rv1756c Rv1764 Rv2106 Rv2167c Rv2279
        Rv2355 Rv2479c Rv2649 Rv2812 Rv2814c Rv3185 Rv3187
        Rv3326 Rv3380c Rv3430c Rv3475
  MtC:  MT0413 MT1803 MT2879 MT2881 MT3100 MT3534 MT3879
  Lla:  L0432 L0433 L0434 L0435 L0436 L0438 L0439
        L0440 L0457 L0458 L0459 L0460 L0461 L0462
        L0463 L0464 L0465 L0466 L0467 L0468 L0469
        L0470 L0471 L0472
  Spy:  SPy0198 SPy0565_2 SPy1336
  Spn:  SP1485
  Sau:  SA0062 SA0063 SA1622 SA1623 SAP014
  Lin:  pli0058 pli0072 pli0076
  Bha:  BH0335 BH0689 BH2343 BH3417 BH3444
  Syn:  slr1523
  Nos:  all3630
  Eco:  b0257 b1578 b4285 tra5_g1 tra5_g2 tra5_g3 tra5_g4
        tra5_g5 yagA yehQ yi22 yi22_g1 yi22_g2 yi22_g3
        yi22_g4 yi22_g5 yi5B yjhS
  EcZ:  Z0322 Z1134 Z1198 Z1207 Z1221 Z1349 Z1466
        Z1573 Z1638 Z1647 Z1660 Z1793 Z1825 Z1934
        Z1957 Z2065 Z2066 Z2073 Z2108 Z2109 Z2111
        Z2376 Z2377 Z2430 Z2806 Z2981 Z3095 Z3107
        Z3162 Z3297 Z3342 Z3924 Z3925 Z3926 Z3927
        Z4334 Z4503 Z5089 Z5880 Z6054 ZyehQ ZyjhS
  Ecs:  ECs0288 ECs1088 ECs1090 ECs1207 ECs1208 ECs1311 ECs1380
        ECs1391 ECs1527 ECs1564 ECs1666 ECs1689 ECs1781 ECs1918
        ECs1961 ECs2189 ECs2219 ECs2262 ECs2478 ECs2636 ECs2745
        ECs2746 ECs2795 ECs2931 ECs2932 ECs2959 ECs2972 ECs3133
        ECs3491 ECs3498 ECs3862 ECs4025 ECs4537 ECs4549 ECs4945
        ECs4993 ECs5244 ECs5268
  Ype:  YPCD1.04 YPCD1.14c YPCD1.15c YPCD1.18c YPCD1.63 YPCD1.64 YPCD1.65
        YPCD1.69 YPCD1.75c YPCD1.81 YPCD1.82c YPCD1.89 YPCD1.93 YPCD1.94
        YPO0118 YPO0756 YPO0997 YPO1873 YPO1889 YPO2009 YPO2640
        YPO3491 YPO3703 YPO3932 YPO4047 YPO4092
  Sty:  PSLT044 STM0297 STM0298 STM0325 STM0947 STM2509 STM2764
        STM2765 STM2769 STM4457
  Vch:  VC0257 VC0817 VC1478 VC1789 VCA0371 VCA0508 VCA0791
  Pae:  PA0257 PA0978 PA0986 PA0987 PA1938 PA3142 PA3143
        PA3144 PA3868
  Hin:  HI0493 HI1280 HI1478 HI1721
  Nme:  NMB1081 NMB1751
  NmA:  NMA1234 NMA1284 NMA1882
  Rso:  RSc0423 RSc0578 RSc0828 RSc0829 RSc1435 RSc1436 RSc1438
        RSc1439 RSc1492 RSc1493 RSc1549 RSc1830 RSc2265 RSc2267
        RSc2313 RSc2331 RSc2405 RSc2406 RSc2408 RSc2706 RSc2707
        RSc3089 RSp0460 RSp0503 RSp0504 RSp0548 RSp0557 RSp0558
        RSp0567 RSp1216 RSp1217 RSp1299 RSp1303 RSp1333 RSp1624
        RSp1625 RSp1628 RSp1629
  Atu:  AGc3822 AGl10 AGl1690 AGl545 AGl547 AGl551 AGpA137
        AGpA37 AGpA508 AGpA535
  Sme:  SMa0360 SMa0444 SMa0806 SMa0841 SMa0846 SMa1029 SMa1171
        SMa1586 SMa1614 SMa1698 SMb20064 SMb20827 SMb20905 SMb20919
        SMb21233 SMc00343 SMc01050 SMc01811 SMc01994 SMc02303 SMc02329
        SMc03248 SMc03296 SMc03948 SMc04250 SMc04433
  Bme:  BMEI1223 BMEI1397 BMEI1401 BMEI1408 BMEI1420 BMEI1422 BMEI1423
        BMEII0183 BMEII0228 BMEII1097
  Mlo:  mll5774 mll6088 mll6089 mll9368 mlr4020 mlr4024 mlr4025
        mlr5757 mlr5807 mlr5843 mlr5946 mlr5952 mlr5973_1 mlr6150
        mlr6273 msr5947 msr9548
  Ccr:  CC0514 CC0515 CC0624 CC2290 CC2291 CC2656 CC2689
        CC2690 CC2729 CC2741 CC2742
  Uur:  UU372
  Mpu:  MYPU_0180 MYPU_1510 MYPU_3940 MYPU_7560
_______

[R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease
  Spo:  SPBC14F5.10c_2
  Dra:  DR2189
  Mtu:  Rv0434
  MtC:  MT0449
  Syn:  sll0195
  Nos:  all4335
  Vch:  VC2303
  Pae:  PA4012
  Rso:  RSc0402
  Atu:  AGl2278
  Sme:  SMc03802
  Bme:  BMEII0402
  Mlo:  mll4430
  Ccr:  CC0109
_______

[NU] COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
  Aae:  aq_1474 aq_1971
  Tma:  TM0837
  Fnu:  FN2095
  Dra:  DR1964
  Cac:  CAC2105
  Lla:  L0313
  Spy:  SPy0101
  Spn:  SP2053
  Sau:  SA1374
  Lin:  lin1384
  Bsu:  BS_comGA
  Bha:  BH2832
  Syn:  slr0063 slr0079
  Nos:  all2444
  Eco:  gspE hofB
  EcZ:  ZhofB
  Ecs:  ECs0111
  Ype:  YPO0815 YPO3426
  Sty:  STM0143
  Vch:  VC0405 VC0835 VC2424 VC2732
  Pae:  PA0686 PA2677 PA3103 PA4526 PA5210
  Hin:  HI0298
  Pmu:  PM0085
  Xfa:  XF1517 XF2544
  Nme:  NMB0329
  NmA:  NMA2159
  Rso:  RSc2308 RSc2825 RSc3115 RSp0148 RSp0464
  Cje:  Cj1471c
  Mlo:  mlr6819
  Ccr:  CC0174
  Ctr:  CT571
  Cpn:  CPn0816
_______

[NU] COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT
  Aae:  aq_2151 aq_745
  Tma:  TM1362
  Fnu:  FN1613
  Dra:  DR0442 DR1163 DR1963
  Cac:  CAC1690
  Syn:  sll1533 slr0161
  Nos:  all2443 all3329
  Eco:  yggR
  EcZ:  ZyggR
  Ecs:  ECs3827
  Ype:  YPO0940
  Sty:  STM3099
  Vch:  VC0462
  Pae:  PA0395
  Xfa:  XF1633
  Nme:  NMB0052
  NmA:  NMA0218
  Rso:  RSc2682
_______

[P] COG2807 Cyanate permease
  Dra:  DR0260
  Cac:  CAC0161
  Cgl:  Cgl0827 Cgl0861
  Spn:  SP0101
  Lin:  lin0946
  Bsu:  BS_yycB
  Eco:  cynX yeaN
  EcZ:  ZcynX ZyeaN
  Ecs:  ECs0394 ECs2500
  Sty:  STM1278
  Pae:  PA0273 PA1626 PA2500
  Rso:  RSp0667
  Cje:  Cj1040c
  Bme:  BMEI1372
_______

[K] COG2808 Transcriptional regulator
  Sce:  YKL070w
  Dra:  DR1683
  Bsu:  BS_paiB
  Bha:  BH0412
  Pae:  PA4182
  Xfa:  XF2038
  Rso:  RSp0689
  Mlo:  mll0013 mlr6176
  Ccr:  CC2566
_______

[V] COG2810 Predicted type IV restriction endonuclease
  Pho:  PH0103
  Pab:  PAB0064
  Ape:  APE1558
  Dra:  DR0137
_______

[C] COG2811 Archaeal/vacuolar-type H+-ATPase subunit H
  Afu:  AF1158
  Hbs:  VNG2146H
  Mac:  MA4152
  Mth:  MTH961
  Mja:  MJ0223
  Tac:  Ta0007a
  Tvo:  TVN0055
  Pho:  PH1983
  Pab:  PAB1179
  Dra:  DR0694
_______

[L] COG2812 DNA polymerase III, gamma/tau subunits
  Aae:  aq_1855
  Tma:  TM0686
  Fnu:  FN1830
  Dra:  DR2410
  Cac:  CAC0125 CAC0300
  Cgl:  Cgl0243
  Mtu:  Rv3721c
  MtC:  MT3824
  Mle:  ML2335
  Lla:  L0279
  Spy:  SPy1364
  Spn:  SP0865
  Sau:  SA0436
  Lin:  lin2852
  Bsu:  BS_dnaX
  Bha:  BH0034
  Syn:  sll1360_1 sll1360_3
  Nos:  alr4932 alr7570
  Eco:  dnaX
  EcZ:  ZdnaX
  Ecs:  ECs0523
  Ype:  YPO3122
  Sty:  STM0484
  Buc:  BU481
  Vch:  VC1054
  Pae:  PA1532
  Hin:  HI1229
  Pmu:  PM0364
  Xfa:  XF1807
  Nme:  NMB1443
  NmA:  NMA1656
  Rso:  RSc1191
  Hpy:  HP0717
  jHp:  jhp0655
  Cje:  Cj1157
  Atu:  AGc147
  Sme:  SMc02905
  Bme:  BMEI1908
  Mlo:  mlr5503
  Ccr:  CC0267
  Rpr:  RP865
  Rco:  RC1336
  Ctr:  CT334
  Cpn:  CPn0040
  Tpa:  TP1005
  Bbu:  BB0461 BB0765
  Uur:  UU087
  Mpu:  MYPU_0490
  Mpn:  MPN618
  Mge:  MG419 MG420
_______

[J] COG2813 16S RNA G1207 methylase RsmC
  Mja:  MJ0882
  Mka:  MK0709
  Pho:  PH1642
  Pab:  PAB0359
  Sso:  SSO0392
  Tma:  TM1664
  Dra:  DR0914
  Lla:  L65498
  Spy:  SPy1232
  Spn:  SP0841
  Sau:  SA0499
  Lin:  lin0284
  Bsu:  BS_ybxB
  Bha:  BH0124
  Eco:  rsmC ygjO
  EcZ:  ZygjO ZyjjT
  Ecs:  ECs3966 ECs5329
  Ype:  YPO0427 YPO0588
  Sty:  STM3220 STM4556
  Buc:  BU328
  Vch:  VC0623 VC2297
  Pae:  PA4617 PA4627
  Hin:  HI0012
  Pmu:  PM0958
  Atu:  AGc122
  Sme:  SMc00325
  Bme:  BMEI1959 BMEI1960
  Mlo:  mlr5563
  Ccr:  CC1837
_______

[G] COG2814 Arabinose efflux permease
  Cgl:  Cgl0650 Cgl2949
  Mtu:  Rv0191
  MtC:  MT0201
  Lla:  L131423
  Sau:  SA2241
  Lin:  lin0870
  Bsu:  BS_ybcL BS_yceJ BS_ydhL BS_yfhI BS_ytbD BS_ywfA
  Bha:  BH2116
  Eco:  araJ ydeA ydhP yicM
  EcZ:  Z0348 Z2679 ZaraJ ZydeA ZyicM
  Ecs:  ECs0311 ECs0446 ECs2135 ECs2366 ECs4596
  Ype:  YPO0798
  Sty:  STM0257 STM0394 STM1522 STM3776
  Pae:  PA2092 PA2219 PA2314 PA2933 PA3303 PA3336 PA4113
        PA4355 PA5548
  Hin:  HI0135
  Pmu:  PM0949
  Xfa:  XF1728 XF1749
  Rso:  RSc0207 RSc1153 RSc3400
  Hpy:  HP1185
  jHp:  jhp1111
  Cje:  Cj1241
  Atu:  AGc1839 AGl1145 AGl2058 AGl23
  Sme:  SMa1485 SMb20071 SMb20625 SMb21168 SMc02161
  Mlo:  mll0781 mll2510 mll3374 mll6183 mll7282 mlr2471 mlr2770
        mlr4084
_______

[S] COG2815 Uncharacterized protein conserved in bacteria
  Tma:  TM1716
  Fnu:  FN0678
  Dra:  DR0350_2
  Cac:  CAC1728_2
  Cgl:  Cgl0041_2 Cgl2127_2
  Mtu:  Rv0014c_2
  MtC:  MT0017_2
  Mle:  ML0016_2
  Lla:  L138452_2
  Spy:  SPy1625_2
  Spn:  SP1732_2
  Sau:  SA1063_2
  Lin:  lin1934_2
  Bsu:  BS_yloP_2
  Bha:  BH2504_2
  Tpa:  TP0307
  Bbu:  BB0063
_______

[L] COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding
  Mac:  MA1439
  Sce:  YGL067w
  Spo:  SPBC1778.03c
  Dra:  DR1168
  Cac:  CAC0145 CAC3396
  Cgl:  Cgl0754
  Mtu:  Rv3199c
  MtC:  MT3293
  Eco:  yjaD
  EcZ:  ZyjaD
  Ecs:  ECs4919
  Ype:  YPO3736
  Sty:  STM4166
  Vch:  VC0331
  Pae:  PA1823
  Hin:  HI0432
  Pmu:  PM1735
  Atu:  AGc150
  Sme:  SMc02903
  Bme:  BMEI1906
  Mlo:  mll5500
  Ccr:  CC0266
_______

[L] COG2818 3-methyladenine DNA glycosylase
  Cgl:  Cgl0145 Cgl2777
  Mtu:  Rv1210
  MtC:  MT1248
  Mle:  ML1066
  Lla:  L0289
  Spy:  SPy2118
  Spn:  SP0180
  Sau:  SA1489
  Lin:  lin1680
  Bha:  BH1453_1
  Eco:  tag
  EcZ:  Ztag
  Ecs:  ECs4434
  Ype:  YPO4074
  Sty:  STM3642
  Vch:  VC1672
  Pae:  PA0010 PA1193
  Hin:  HI0654
  Pmu:  PM1601
  Nme:  NMB1673
  NmA:  NMA1931
  Rso:  RSp0666
  Atu:  AGc1200
  Sme:  SMc00923
  Bme:  BMEII1058
  Mlo:  mll0820 mlr6925
  Ccr:  CC0382
_______

[R] COG2819 Predicted hydrolase of the alpha/beta superfamily
  Dra:  DR0779_2
  Cac:  CAC1962
  Spn:  SP0882
  Bsu:  BS_ybbA BS_yuiI
  EcZ:  Z1341
  Ecs:  ECs1077
  Sty:  STM2776
  Pae:  PA2689
  Nme:  NMB1828
  Cje:  Cj1376
  Atu:  AGpA515
  Ccr:  CC0341
_______

[F] COG2820 Uridine phosphorylase
  Hbs:  VNG0893G VNG1850G
  Pya:  PAE1476 PAE3111
  Sso:  SSO2706
  Ape:  APE0993 APE2105
  Mle:  ML2177
  Lla:  L54803
  Spy:  SPy1869
  Eco:  udp
  EcZ:  Zudp
  Ecs:  ECs4761
  Ype:  YPO3786
  Sty:  STM3968
  Vch:  VC1034 VCA0134
  Hin:  HI0280
  Pmu:  PM1572
  Tpa:  TP1027
_______

[M] COG2821 Membrane-bound lytic murein transglycosylase
  Syn:  sll0016
  Nos:  alr0564 alr2933
  Eco:  mltA
  EcZ:  ZmltA
  Ecs:  ECs3673
  Ype:  YPO1025
  Sty:  STM2988
  Buc:  BU458
  Vch:  VC2312
  Pae:  PA1222
  Hin:  HI0117
  Pmu:  PM0928
  Nme:  NMB0033
  NmA:  NMA0279
  Rso:  RSc2876
  Atu:  AGc15
  Sme:  SMc02785
  Bme:  BMEI2052
  Mlo:  mlr4546
  Ccr:  CC3740
_______

[P] COG2822 Predicted periplasmic lipoprotein involved in iron transport
  Sau:  SA0331
  Lin:  lin0385
  Bsu:  BS_ywbM
  Eco:  ycdO
  EcZ:  ZycdO
  Ecs:  ECs1264
  Ype:  YPO1855
  Nme:  NMB0035
  NmA:  NMA0281
_______

[R] COG2823 Predicted periplasmic or secreted lipoprotein
  Dra:  DR0392
  Cac:  CAC0440
  Eco:  osmY yraP
  EcZ:  ZosmY ZyraP
  Ecs:  ECs4031 ECs5334
  Ype:  YPO0431 YPO2202 YPO3551
  Sty:  STM3267 STM4561
  Vch:  VC0578
  Pae:  PA4426 PA4739
  Hin:  HI1658
  Pmu:  PM0649
  Nme:  NMB2091
  NmA:  NMA0339
  Rso:  RSc0186 RSc0189 RSc3264_1
  Sme:  SMa1153 SMb20225 SMb21444
  Rpr:  RP391
  Rco:  RC0538
_______

[P] COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
  Cgl:  Cgl1039
  Lla:  L115500
  Spy:  SPy1277
  Spn:  SP1602
  Lin:  lin0389
  Eco:  phnA
  EcZ:  ZphnA
  Ecs:  ECs5090
  Ype:  YPO2730
  Sty:  STM4289
  Vch:  VCA0549
  Pae:  PA0128
  Hin:  HI0046
  Pmu:  PM0158
  Nme:  NMB0037
  NmA:  NMA0283
  Rso:  RSp1381
  Hpy:  HP0872
  jHp:  jhp0806
  Cje:  Cj0185c
  Atu:  AGpT201
  Sme:  SMc00099
  Bme:  BMEI0547
  Mlo:  msr9307
  Ccr:  CC3005
_______

[M] COG2825 Outer membrane protein
  Aae:  aq_157
  Tma:  TM1053
  Dra:  DR0988 DR0989
  Eco:  hlpA
  EcZ:  ZhlpA
  Ecs:  ECs0180
  Ype:  YPO1053
  Sty:  STM0225
  Vch:  VC2251
  Pae:  PA3647
  Hin:  HI0916
  Pmu:  PM1993
  Nme:  NMB0181
  NmA:  NMA0086
  Rso:  RSc1413
  Ccr:  CC1914
  Rpr:  RP264
  Rco:  RC0352
  Ctr:  CT242
  Cpn:  CPn0301
  Tpa:  TP0327
  Bbu:  BB0796
_______

[L] COG2826 Transposase and inactivated derivatives, IS30 family
  Cgl:  Cgl0182 Cgl2163 Cgl2786
  Mtu:  Rv3191c
  MtC:  MT3281
  Lla:  L00457 L0443 L0444 L0445 L0446 L0447 L0448
        L0449 L0450 L0451 L0452 L0453 L0454 L0455
        L0456
  Spn:  SP0915
  Bha:  BH2524 BH3503 BH3950
  Eco:  tra8_g1 tra8_g2 tra8_g3
  EcZ:  Z1133 Z1572 Ztra8.2 Ztra8.3
  Ecs:  ECs1310 ECs2647 ECs3505
  Nme:  NMB0225 NMB0443 NMB0635 NMB0805 NMB0834 NMB0911 NMB1022
        NMB1050 NMB1099 NMB1251 NMB1259 NMB1713 NMB1770 NMB2148
  NmA:  NMA0033 NMA0511 NMA0768 NMA1481 NMA1486 NMA1814
  Rso:  RSp1588
  Atu:  AGc2744 AGpA696
  Sme:  SMa0656 SMa0977 SMa2047 SMc01195
  Ccr:  CC1761
  Mpu:  MYPU_3910 MYPU_3920 MYPU_3990 MYPU_4000
_______

[L] COG2827 Predicted endonuclease containing a URI domain
  Hbs:  VNG2274C
  Fnu:  FN1575
  Lla:  L1889726
  Spy:  SPy1412
  Spn:  SP1535
  Sau:  SA0446
  Lin:  lin0209
  Bsu:  BS_yazA
  Bha:  BH0048
  Eco:  yhbQ
  EcZ:  ZyhbQ
  Ecs:  ECs4036
  Ype:  YPO3475
  Sty:  STM3271
  Vch:  VCA0739
  Pae:  PA3854
  Nme:  NMB0047 NMB0248 NMB0361
  NmA:  NMA0011 NMA0292 NMA2126
  Sme:  SMc00344 SMc02088
  Bme:  BMEII0261
  Mlo:  msl2076 msr4424
  Ccr:  CC0707 CC1343 CC3518
_______

[S] COG2828 Uncharacterized protein conserved in bacteria
  Bsu:  BS_yraM
  Eco:  ybhH
  EcZ:  ZybhH
  Ecs:  ECs0797
  Vch:  VC1339
  Pae:  PA0793
  Xfa:  XF1243
  Nme:  NMB0434
  NmA:  NMA2051
  Rso:  RSp0119
  Atu:  AGl1196
  Sme:  SMc00497
  Mlo:  mll6980
_______

[M] COG2829 Outer membrane phospholipase A
  Eco:  pldA
  EcZ:  ZpldA
  Ecs:  ECs4751
  Ype:  YPO3834
  Sty:  STM3957
  Pmu:  PM1426
  Nme:  NMB0464
  NmA:  NMA2021
  Hpy:  HP0499
  jHp:  jhp0451
  Cje:  Cj1351
_______

[S] COG2830 Uncharacterized protein conserved in bacteria
  Hin:  HI1552
  Pmu:  PM1902
  Nme:  NMB0473
  NmA:  NMA2012
  Cje:  Cj0305c
_______

[U] COG2831 Hemolysin activation/secretion protein
  Fnu:  FN0131 FN0292 FN0293 FN1818
  Syn:  slr1661
  Nos:  all1186 all5116 alr1659
  EcZ:  Z1200 Z1543 Z1640
  Ecs:  ECs1283 ECs1382
  Ype:  YPO0598 YPO2044 YPO2491 YPO3248 YPO3720 YPO4005
  Pae:  PA0040 PA0692 PA2463 PA4540 PA4624
  Hin:  HI0263
  Pmu:  PM0056 PM0058
  Xfa:  XF2550
  Nme:  NMB0496 NMB1762 NMB1780
  NmA:  NMA0687
  Rso:  RSc0888 RSc1779 RSc3182 RSp0550 RSp1075 RSp1095 RSp1445
        RSp1535
  Cje:  Cj0975
  Ccr:  CC0603
_______

[S] COG2832 Uncharacterized protein conserved in bacteria
  Fnu:  FN2099
  Dra:  DR1457
  Spn:  SP1261
  Sau:  SA0161
  Eco:  ybaN
  EcZ:  ZybaN
  Ecs:  ECs0521
  Sty:  STM0482
  Vch:  VC1052
  Pae:  PA1439
  Hin:  HI0213.1
  Pmu:  PM0679
  Nme:  NMB0571
  NmA:  NMA0754
  Atu:  AGc4462
  Sme:  SMb20557
  Bme:  BMEI1990
_______

[S] COG2833 Uncharacterized protein conserved in bacteria
  Hin:  HI0077
  Pmu:  PM0569
  Nme:  NMB0621
  NmA:  NMA0829
  Rso:  RSc1134
  Cje:  Cj1113
  Atu:  AGc3363
  Sme:  SMc00523 SMc00540
  Bme:  BMEI1050
_______

[M] COG2834 Outer membrane lipoprotein-sorting protein
  Afu:  AF1312 AF1927
  Hbs:  VNG0483C VNG1094H
  Mac:  MA0199 MA0563 MA1528 MA4325 MA4326 MA4327 MA4328
  Mja:  MJ0687
  Aae:  aq_1483
  Dra:  DR1370
  Cac:  CAC0491
  Bsu:  BS_ydcC
  Bha:  BH0519
  Eco:  lolA
  EcZ:  ZlolA
  Ecs:  ECs0976
  Ype:  YPO1377
  Sty:  STM0961
  Vch:  VC1107
  Pae:  PA2614
  Hin:  HI1591
  Pmu:  PM0256
  Xfa:  XF1452
  Nme:  NMB0622
  NmA:  NMA0830
  Rso:  RSc2340
  Hpy:  HP0785
  jHp:  jhp0722
  Cje:  Cj0943
  Atu:  AGc5005
  Sme:  SMc03809
  Bme:  BMEI0069
  Mlo:  mll4242 mll8064 mll9691
  Ccr:  CC3705
  Rpr:  RP864
  Rco:  RC1335
  Tpa:  TP0333
  Bbu:  BB0346
_______

[S] COG2835 Uncharacterized conserved protein
  Hbs:  VNG1090H
  Mac:  MA3281
  Pya:  PAE0284
  Sso:  SSO0206
  Ape:  APE0505
  Cgl:  Cgl1372
  Mtu:  Rv1684
  MtC:  MT1724
  Mle:  ML1347
  Eco:  ycaR
  EcZ:  ZycaR
  Ecs:  ECs1000
  Ype:  YPO1399
  Sty:  STM0987
  Vch:  VC1876
  Pae:  PA2980
  Pmu:  PM0859
  Xfa:  XF2673
  Nme:  NMB0674
  NmA:  NMA0874
  Rso:  RSc2531
  Sme:  SMc03803
  Bme:  BMEII0403
  Mlo:  msl4429
  Ccr:  CC0108
_______

[S] COG2836 Uncharacterized conserved protein
  Hbs:  VNG2199H
  Cac:  CAC1554_2
  Nos:  alr4711_1
  Vch:  VC1435
  Pae:  PA1547
  Nme:  NMB0759
  NmA:  NMA0970
  Rso:  RSc1284
  Hpy:  HP0861
  jHp:  jhp0795
  Cje:  Cj1493c
_______

[P] COG2837 Predicted iron-dependent peroxidase
  Dra:  DRA0145
  Cgl:  Cgl1632
  Mtu:  Rv0799c
  MtC:  MT0820
  Sau:  SA0332
  Lin:  lin0386
  Bsu:  BS_ywbN
  Nos:  alr1585
  Eco:  ycdB yfeX
  EcZ:  Z3696 ZycdB
  Ecs:  ECs1265 ECs3302
  Ype:  YPO1856 YPO3025
  Sty:  STM2446
  Vch:  VC2145
  Pae:  PA2765
  Pmu:  PM0455
  Nme:  NMB0036 NMB0786
  NmA:  NMA0282 NMA0996
  Rso:  RSc1546_1
  Mlo:  mlr1483
_______

[C] COG2838 Monomeric isocitrate dehydrogenase
  Cgl:  Cgl0644
  Mtu:  Rv0066c
  MtC:  MT0072
  Mle:  ML2672
  Vch:  VC1141
  Pae:  PA2624
  Xfa:  XF2700
  Nme:  NMB0920
  NmA:  NMA1116
  Cje:  Cj0531
_______

[S] COG2839 Uncharacterized protein conserved in bacteria
  Dra:  DR1441
  Sau:  SA0629
  Bsu:  BS_yqgC
  Bha:  BH3807
  Nos:  all3820
  Nme:  NMB0932
  NmA:  NMA1128
_______

[S] COG2840 Uncharacterized protein conserved in bacteria
  Eco:  ydaL yfcN
  EcZ:  Z3594 ZydaL
  Ecs:  ECs1924 ECs3214
  Ype:  YPO2749
  Sty:  STM1658 STM2386
  Buc:  BU098
  Vch:  VC2119 VC2222
  Pae:  PA1675
  Hin:  HI1202
  Pmu:  PM0391
  Xfa:  XF1295
  Nme:  NMB1016
  NmA:  NMA1237
  Rso:  RSc2343
  Atu:  AGc17
  Sme:  SMc02784
  Bme:  BMEI2051
  Mlo:  mlr4547
  Ccr:  CC3739
  Tpa:  TP0674
_______

[S] COG2841 Uncharacterized protein conserved in bacteria
  Eco:  ydcH
  EcZ:  ZydcH
  Ecs:  ECs2031
  Pae:  PA4611
  Pmu:  PM1568
  Nme:  NMB1059
  NmA:  NMA1258
  Hpy:  HP1242
  jHp:  jhp1163
  Cje:  Cj0449c
  Bme:  BMEII1067
_______

[R] COG2842 Uncharacterized ATPase, putative transposase
  Dra:  DRA0076
  Sau:  SAP015_1
  Lin:  pli0057
  Nos:  all3629
  Ecs:  ECs4946
  Hin:  HI1481
  Nme:  NMB1083_1
  NmA:  NMA1286 NMA1881
_______

[M] COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
  Mac:  MA3657
  Dra:  DRA0023
  Mtu:  Rv0574c
  MtC:  MT0602
  Spy:  SPy0818
  Spn:  SP1453
  Lin:  lin0516
  Bsu:  BS_ywtB
  Nme:  NMB1147 NMB1185
  NmA:  NMA1359
  Sme:  SMb21041
  Mlo:  mll2622 mlr3304_2
  Ccr:  CC1625
_______

[O] COG2844 UTP:GlnB (protein PII) uridylyltransferase
  Cgl:  Cgl2010
  Mtu:  Rv2918c
  MtC:  MT2986
  Eco:  glnD
  EcZ:  ZglnD
  Ecs:  ECs0169
  Ype:  YPO1042
  Sty:  STM0214
  Vch:  VC2262
  Pae:  PA3658
  Hin:  HI1719
  Pmu:  PM0460
  Nme:  NMB1203
  NmA:  NMA1374
  Rso:  RSc1402
  Atu:  AGc606
  Sme:  SMc01124
  Bme:  BMEI1804
  Mlo:  mll5321
  Ccr:  CC0013
_______

[S] COG2845 Uncharacterized protein conserved in bacteria
  Nme:  NMB1274
  NmA:  NMA1479
  Cje:  Cj0610c
  Atu:  AGl2110
  Sme:  SMc04025
  Bme:  BMEII0037
  Mlo:  mlr3028
  Tpa:  TP0565
_______

[D] COG2846 Regulator of cell morphogenesis and NO signaling
  Cac:  CAC0071
  Sau:  SA0249
  Eco:  ytfE
  EcZ:  ZytfE
  Ecs:  ECs5187
  Ype:  YPO3531
  Sty:  STM4399
  Hin:  HI1677
  Nme:  NMB1365
  NmA:  NMA1577
  Rso:  RSp0958
  Sme:  SMa1195
_______

[S] COG2847 Uncharacterized protein conserved in bacteria
  Pya:  PAE1332
  Aae:  aq_1253
  Dra:  DR1885
  Cgl:  Cgl1633
  Vch:  VCA0037
  Pae:  PA3785
  Pmu:  PM1845
  Nme:  NMB1557
  NmA:  NMA1745
  Rso:  RSc0038
  Cje:  Cj0909
  Atu:  AGc2707_2
  Sme:  SMc01242_2
  Bme:  BMEI1890_2
  Mlo:  mll3326
  Ccr:  CC3502
  Rpr:  RP573
  Rco:  RC0865
_______

[S] COG2848 Uncharacterized conserved protein
  Mac:  MA1691
  Mja:  MJ1665
  Mka:  MK1214
  Pya:  PAE2151 PAE3581
  Sso:  SSO0358
  Ape:  APE2446
  Cac:  CAC0479
  Cgl:  Cgl1509
  Lla:  L172471
  Spn:  SP0239
  Lin:  lin0538
  Nme:  NMB1652
  NmA:  NMA1908
_______

[S] COG2849 Uncharacterized protein conserved in bacteria
  Fnu:  FN0024 FN0025 FN0026 FN0043 FN0247 FN0248 FN0518
        FN0519 FN0601 FN0637 FN0738_1 FN0774 FN0846 FN1078
        FN1146 FN1230 FN1512 FN1514 FN1515 FN2110 FN2111
        FN2116 FN2117 FN2118 FN2119 FN2120 FN2121
  Bsu:  BS_ywqK
  Ype:  YPO1989_1
  Sty:  STM2007_1
  Pae:  PA2374
  Nme:  NMB1654
  NmA:  NMA1911
  Cje:  Cj0424
  Ctr:  CT476 CT648
  Cpn:  CPn0595 CPn0764
_______

[S] COG2850 Uncharacterized conserved protein
  Bsu:  BS_yxbC
  Eco:  ycfD
  EcZ:  ZycfD
  Ecs:  ECs1573
  Ype:  YPO1632 YPO2798
  Sty:  STM1229
  Pae:  PA2630
  Hin:  HI0396
  Pmu:  PM0167
  Xfa:  XF1552
  Nme:  NMB1786
  NmA:  NMA0679
  Rso:  RSc1148
_______

[C] COG2851 H+/citrate symporter
  Cgl:  Cgl0067
  Spy:  SPy1180
  Sau:  SA2411
  Bsu:  BS_citM BS_yraO BS_yxiQ
  Bha:  BH0745
  Pae:  PA5468
  Xfa:  XF0320
  Nme:  NMB1794
  NmA:  NMA0668
  Cje:  Cj0203
_______

[S] COG2852 Uncharacterized protein conserved in bacteria
  Dra:  DR0221
  Lin:  lin2582
  Nos:  all1265
  Eco:  ycjD
  Hin:  HI0925 HI1162
  Nme:  NMB1852
  NmA:  NMA0605
  Sme:  SMc02732
  Ccr:  CC0421 CC2814 CC2838
_______

[M] COG2853 Surface lipoprotein
  Fnu:  FN0279
  Eco:  vacJ
  EcZ:  ZvacJ
  Ecs:  ECs3229
  Ype:  YPO2743
  Sty:  STM2392
  Vch:  VC2048
  Pae:  PA2800 PA3239
  Hin:  HI0718
  Pmu:  PM1501
  Xfa:  XF0416
  Nme:  NMB1961
  NmA:  NMA0490
  Rso:  RSc2959 RSp0916
  Cje:  Cj1371
  Ccr:  CC3692
  Rpr:  RP093
  Rco:  RC0123
_______

[Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component
  Eco:  yrbC
  EcZ:  ZyrbC
  Ecs:  ECs4071
  Ype:  YPO3572
  Sty:  STM3310
  Vch:  VC2517
  Pae:  PA4453
  Hin:  HI1084
  Pmu:  PM0177
  Xfa:  XF0418
  Nme:  NMB1963
  NmA:  NMA0488
  Rso:  RSc2958
  Cje:  Cj1372
  Ccr:  CC3693
  Rpr:  RP094
  Rco:  RC0124
_______

[S] COG2855 Predicted membrane protein
  Afu:  AF1621
  Fnu:  FN0533
  Cgl:  Cgl0014
  Lla:  L178384
  Spy:  SPy1056
  Spn:  SP0034
  Sau:  SA0329
  Lin:  lin2251
  Eco:  yeiH
  EcZ:  ZyeiH
  Ecs:  ECs3050
  Ype:  YPO1307
  Sty:  STM2202
  Pae:  PA5383
  Hin:  HI1643
  Pmu:  PM1461
  Nme:  NMB1979
  NmA:  NMA0465
  Rso:  RSc1111
  Cje:  Cj0999c
  Atu:  AGc1202
  Sme:  SMa1737 SMb21531
  Bme:  BMEI1914
  Mlo:  mlr2225
  Ccr:  CC0425
_______

[E] COG2856 Predicted Zn peptidase
  Fnu:  FN2066
  Dra:  DR0167
  Cac:  CAC0548
  Mtu:  Rv2017_2 Rv2515c_2
  MtC:  MT2073_2 MT2591_2
  Spn:  SP1809_2
  Sau:  SA0142_2
  Lin:  lin1233 lin1763
  Bsu:  BS_ydcM
  Bha:  BH3550
  Nos:  all5131_2
  Xfa:  XF0496_2
  Nme:  NMB2012_2
  Rso:  RSc3252
  Bme:  BMEI1683
  Bbu:  BBB26
_______

[C] COG2857 Cytochrome c1
  Sce:  YOR065w
  Spo:  SPBC29A3.18
  Aae:  aq_042
  Bsu:  BS_ctaC_2
  Bha:  BH2615_2
  Vch:  VC0575
  Pae:  PA4429
  Xfa:  XF0910
  Nme:  NMB2051
  NmA:  NMA0385
  Rso:  RSc2927 RSp1564_2
  Hpy:  HP1538
  jHp:  jhp1461
  Cje:  Cj1184c
  Atu:  AGc4072
  Sme:  SMb21368_2 SMc00189
  Bme:  BMEI0475
  Mlo:  mll2705 mll9631_2
  Ccr:  CC0474
  Rpr:  RP272
  Rco:  RC0360
_______

[S] COG2859 Uncharacterized protein conserved in bacteria
  Syn:  slr1258
  EcZ:  Z2800
  Ecs:  ECs2473
  Vch:  VCA0167
  Cje:  Cj0034c
  Bbu:  BB0223 BB0224 BBK13
_______

[S] COG2860 Predicted membrane protein
  Hbs:  VNG0298H
  Pya:  PAE2348
  Sso:  SSO0012
  Dra:  DR2368
  Cgl:  Cgl0134 Cgl0652
  Lla:  L169795
  Spy:  SPy1701
  Bsu:  BS_yvgT
  Bha:  BH1709
  Eco:  yadS yicG
  EcZ:  ZyadS ZyicG
  Ecs:  ECs0161 ECs4521
  Ype:  YPO0042 YPO3386
  Sty:  STM0205 STM3738
  Vch:  VC2115 VC2382
  Pae:  PA1037
  Hin:  HI1240
  Pmu:  PM0935
  Rso:  RSc2344
  Cje:  Cj0593c
  Atu:  AGc252
  Sme:  SMc00330
  Bme:  BMEI1778
  Mlo:  mll3219
  Ccr:  CC3680
_______

[S] COG2861 Uncharacterized protein conserved in bacteria
  Bha:  BH1492
  Eco:  yibQ
  EcZ:  ZyibQ
  Ecs:  ECs4492
  Sty:  STM3706
  Pae:  PA5135
  Hin:  HI0755
  Pmu:  PM1508
  Cje:  Cj0633
  Atu:  AGc5032
  Sme:  SMc03784
  Mlo:  mll3999
  Ccr:  CC3439
  Bbu:  BB0770
_______

[S] COG2862 Predicted membrane protein
  Mac:  MA2651
  Aae:  aq_286
  Dra:  DR0275 DR1879
  Eco:  yqhA
  EcZ:  ZyqhA
  Ecs:  ECs3886
  Sty:  STM3153
  Buc:  BUpL02
  Vch:  VC0208
  Pae:  PA4574
  Hin:  HI0507
  Pmu:  PM1258
  Rso:  RSc1954
  Hpy:  HP0189
  jHp:  jhp0175
  Cje:  Cj1022c
  Atu:  AGc4155
  Ccr:  CC1036
_______

[C] COG2863 Cytochrome c553
  Dra:  DR2487
  Ype:  YPO1063 YPO1948
  Vch:  VC0112 VC2241 VCA0766
  Pae:  PA2257 PA2482 PA5490
  Pmu:  PM0446
  Nme:  NMB1805
  NmA:  NMA0658
  Rso:  RSc0197 RSc0999 RSc1000 RSc2987 RSc3263
  Hpy:  HP1227
  jHp:  jhp1148
  Cje:  Cj1153
  Sme:  SMb21367
_______

[C] COG2864 Cytochrome b subunit of formate dehydrogenase
  Afu:  AF1379
  Mac:  MA1143 MA1148
  Aae:  aq_1049
  Eco:  fdnI fdoI
  EcZ:  ZfdnI ZfdoI
  Ecs:  ECs2080 ECs4818
  Ype:  YPO4056
  Sty:  STM1568 STM4035
  Vch:  VC1511
  Pae:  PA4810
  Hin:  HI0008
  Pmu:  PM0406
  Rso:  RSc2370
  Cje:  Cj1509c
  Sme:  SMa0007
_______

[K] COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
  Mac:  MA2121 MA2369 MA2370 MA2413
  Pab:  PAB0790 PAB1002
  Fnu:  FN0191 FN0830 FN1662
  Dra:  DR2199
  Cgl:  Cgl0025
  Cje:  Cj1552c
  Uur:  UU038
_______

[E] COG2866 Predicted carboxypeptidase
  Mac:  MA3604
  Sce:  YHR132c
  Spo:  SPBC337.07c
  Bsu:  BS_yqgT
  Bha:  BH1603 BH3831 BH3865_1
  Syn:  sll0236
  Eco:  ycjI
  EcZ:  ZycjI
  Ecs:  ECs1905
  Ype:  YPO2340
  Sty:  STM1680
  Pae:  PA2831 PA3054_1
  Nme:  NMB1073
  NmA:  NMA1274
  Rso:  RSc2008
  Ccr:  CC0311_1
_______

[I] COG2867 Oligoketide cyclase/lipid transport protein
  Sce:  YOL008w
  Spo:  SPCC16A11.07
  Eco:  yfjG
  EcZ:  Z3912
  Ecs:  ECs3481
  Ype:  YPO1102
  Sty:  STM2687
  Vch:  VC0849
  Pae:  PA4767
  Pmu:  PM0165
  Xfa:  XF2347
  Nme:  NMB0797
  NmA:  NMA1006
  Rso:  RSc1425
  Atu:  AGc2657
  Sme:  SMc01038
  Bme:  BMEI0860
  Mlo:  mlr0393
  Ccr:  CC1736
  Rpr:  RP166
  Rco:  RC0208
_______

[J] COG2868 Predicted ribosomal protein
  Fnu:  FN1118
  Cac:  CAC1258
  Lla:  L90693
  Spy:  SPy0821
  Spn:  SP1106
  Sau:  SA1472
  Lin:  lin1576
  Bsu:  BS_ysxB
  Bha:  BH3010
  Tpa:  TP0744
  Bbu:  BB0779
  Uur:  UU211
  Mpn:  MPN326
  Mge:  MG233
_______

[C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC
  Ype:  YPO3238
  Vch:  VC2293
  Pae:  PA2997
  Hin:  HI0167
  Pmu:  PM1330
  Nme:  NMB0567
  NmA:  NMA0750
  Ctr:  CT279
  Cpn:  CPn0428
_______

[M] COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
  Mja:  MJ1336
  Aae:  aq_185 aq_565
  Fnu:  FN0930 FN1786
  Eco:  rfaE
  EcZ:  Z4405
  Ecs:  ECs3935
  Ype:  YPO0654
  Sty:  STM3200
  Buc:  BU060
  Pae:  PA4996
  Hin:  HI1526
  Pmu:  PM0884
  Nme:  NMB0825 NMB2076
  NmA:  NMA0356 NMA1034
  Rso:  RSc0309 RSc0914
  Hpy:  HP0858
  jHp:  jhp0792
  Cje:  Cj1150c
  Mlo:  mll2562
  Ccr:  CC3640
_______

[C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
  Ype:  YPO3235
  Vch:  VC2290
  Pae:  PA2994
  Hin:  HI0171
  Pmu:  PM1333
  Nme:  NMB0564
  NmA:  NMA0747
  Ctr:  CT740
  Cpn:  CPn0883
_______

[R] COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
  Mac:  MA2014
  Tac:  Ta0124m Ta0499
  Tvo:  TVN0201 TVN0756
  Pho:  PH0108 PH0574 PH1969
  Pab:  PAB0066 PAB1190 PAB1440
  Pya:  PAE2317
  Sso:  SSO0450 SSO1271
  Ape:  APE0903
  Sce:  YNL040w
  Tma:  TM1726
  Fnu:  FN0527
  Dra:  DR0502
  Cac:  CAC0906
  Bha:  BH2934
  Vch:  VC0764
  Pae:  PA2106
  Rso:  RSc0988
  Atu:  AGc2246
  Sme:  SMc01173
  Bme:  BMEI0932
  Mlo:  mlr0354
_______

[E] COG2873 O-acetylhomoserine sulfhydrylase
  Hbs:  VNG2421G
  Mac:  MA2715
  Sce:  YLR303w
  Spo:  SPBC428.11
  Tma:  TM0882
  Dra:  DR0873 DR2186
  Cac:  CAC0102 CAC2783
  Cgl:  Cgl0634
  Mtu:  Rv3340
  MtC:  MT3443
  Lla:  L75975
  Lin:  lin0604
  Bha:  BH2603
  Pae:  PA5025
  Pmu:  PM0738
  Rso:  RSc1562 RSc3415 RSp1583
  Cje:  Cj1727c
  Atu:  AGc2311
  Sme:  SMc01809
  Bme:  BMEI1166
  Mlo:  mlr8465
_______

[NU] COG2874 Predicted ATPases involved in biogenesis of archaeal flagella
  Afu:  AF1050
  Hbs:  VNG0950Gm
  Mac:  MA3057 MA3081
  Mja:  MJ0899
  Tac:  Ta0558
  Tvo:  TVN0612
  Pho:  PH0556
  Pab:  PAB1385
  Sso:  SSO2318
  Ape:  APE1898
_______

[H] COG2875 Precorrin-4 methylase
  Afu:  AF0726
  Hbs:  VNG1553G
  Mac:  MA4261
  Mth:  MTH602
  Mja:  MJ1578
  Mka:  MK1375
  Tac:  Ta0659
  Tvo:  TVN0917
  Pya:  PAE0349
  Sso:  SSO2299
  Fnu:  FN0957
  Cac:  CAC1380
  Mtu:  Rv2071c
  MtC:  MT2131
  Lin:  lin1160
  Syn:  slr0239
  Nos:  all4698
  Sty:  STM2029
  Pae:  PA2948
  Rso:  RSp0620
  Atu:  AGc5074
  Sme:  SMc03187
  Bme:  BMEI0701
  Mlo:  mlr1385
_______

[E] COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
  Tac:  Ta0247
  Tvo:  TVN1351
  Pab:  PAB0297
  Pya:  PAE1932
  Sso:  SSO0304
  Ape:  APE0581
  Tma:  TM0343
  Fnu:  FN1562
  Dra:  DR1001_2
  Cac:  CAC0892
  Spy:  SPy1576
  Sau:  SA1558_2
  Lin:  lin1641_2
  Bsu:  BS_aroA_2
  Bha:  BH3242_2
  Syn:  sll0934
  Nos:  all0408 all0747 alr3050
  Nme:  NMB1692
  Ctr:  CT382
  Cpn:  CPn0484
_______

[M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase
  Aae:  aq_085
  Fnu:  FN1224
  Eco:  kdsA
  EcZ:  ZkdsA
  Ecs:  ECs1720
  Ype:  YPO2021
  Sty:  STM1772
  Vch:  VC2175
  Pae:  PA3636
  Hin:  HI1557
  Pmu:  PM0558
  Xfa:  XF1289
  Nme:  NMB1283
  NmA:  NMA1493
  Rso:  RSc1127
  Hpy:  HP0003
  jHp:  jhp0003
  Cje:  Cj0384c
  Atu:  AGc2628
  Sme:  SMc01027
  Bme:  BMEI0850
  Mlo:  mlr0374
  Ccr:  CC1429
  Rpr:  RP062
  Rco:  RC0090
  Ctr:  CT655
  Cpn:  CPn0721
_______

[C] COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
  Mac:  MA0664
  Tma:  TM0249
  Fnu:  FN1591
  Eco:  ydgM
  EcZ:  Z2634
  Ecs:  ECs2337
  Ype:  YPO2245
  Sty:  STM1458
  Buc:  BU114
  Vch:  VC1016
  Pae:  PA3490
  Hin:  HI1684
  Pmu:  PM0386
  Xfa:  XF0547
  Nme:  NMB0208
  NmA:  NMA0061
  Rso:  RSc1006
_______

[S] COG2879 Uncharacterized small protein
  Eco:  ybdD yjiX
  EcZ:  ZyjiX
  Ecs:  ECs5312
  Ype:  YPO2233
  Sty:  STM0601 STM4531
  Pae:  PA4605
  Nme:  NMB1494
  NmA:  NMA1699
  Rso:  RSc0023
  Cje:  Cj0916c
_______

[S] COG2880 Uncharacterized protein conserved in archaea
  Afu:  AF0314 AF0316 AF0319 AF1074 AF1079 AF1084 AF1087
        AF1090 AF1092 AF1095 AF1712 AF2212
  Mja:  MJ0975 MJECL31
  Pab:  PAB3298 PAB8218
  Ape:  APES010 APES043
_______

[S] COG2881 Uncharacterized protein conserved in archaea
  Afu:  AF0147 AF0496 AF0793
  Hbs:  VNG0244H VNG1514H
  Mac:  MA1553 MA1729 MA1731 MA2708 MA4610
  Mth:  MTH1781
  Mja:  MJ0794
_______

[NUO] COG2882 Flagellar biosynthesis chaperone
  Tma:  TM0512
  Cac:  CAC2158
  Bsu:  BS_fliJ
  Bha:  BH2454
  Eco:  fliJ
  EcZ:  ZfliJ
  Ecs:  ECs2681
  Ype:  YPO1826
  Sty:  STM1973
  Buc:  BU077
  Vch:  VC2129
  Pae:  PA1105
  Rso:  RSp0394
  Tpa:  TP0403
_______

[D] COG2884 Predicted ATPase involved in cell division
  Dra:  DR1550_1
  Cac:  CAC0497
  Cgl:  Cgl0779
  Mtu:  Rv3102c
  MtC:  MT3186
  Mle:  ML0669
  Lla:  L0205
  Spy:  SPy0644
  Spn:  SP0756
  Lin:  lin2650
  Bsu:  BS_ftsE
  Bha:  BH3602
  Nos:  alr1706
  Eco:  ftsE
  EcZ:  ZftsE
  Ecs:  ECs4312
  Ype:  YPO3813
  Sty:  STM3570
  Vch:  VC0148
  Pae:  PA0374
  Hin:  HI0769
  Pmu:  PM1520
  Xfa:  XF2695
  Nme:  NMB0007
  NmA:  NMA0254
  Atu:  AGl2441
  Sme:  SMc00717
  Bme:  BMEI0072
  Mlo:  mlr3522
  Ccr:  CC2216
_______

[M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins
  Aae:  aq_2147
  Fnu:  FN0253 FN0335 FN1124 FN1265 FN2048 FN2059
  Mtu:  Rv0899
  MtC:  MT0922
  Nos:  all3031_2
  Eco:  ompA pal yfiB yiaD
  EcZ:  Z5895 ZompA Zpal ZyfiB ZyiaD
  Ecs:  ECs0776 ECs1041 ECs3468 ECs4437 ECs5257
  Ype:  YPO0448 YPO0974_2 YPO1125 YPO1435 YPO1469_2 YPO2953_2 YPO4076
  Sty:  STM0749 STM1070 STM3645
  Buc:  BU332
  Vch:  VC1008 VC1195 VC1622 VC1835 VC2213 VCA0659
  Pae:  PA0833 PA0973 PA1041 PA1048 PA1119 PA1777 PA2548_2
        PA2900 PA3526 PA3692
  Hin:  HI0381 HI1164
  Pmu:  PM0586_2 PM0786 PM0966
  Xfa:  XF0343 XF0363 XF1896
  Nme:  NMB0382
  NmA:  NMA2105
  Rso:  RSc0736 RSc0900 RSc2380 RSp0761
  Hpy:  HP1125
  jHp:  jhp1054
  Cje:  Cj0113 Cj0599_2 Cj1478c
  Atu:  AGc3445_2 AGc4934 AGl2246
  Sme:  SMa0626_1 SMc00141_2 SMc00354 SMc02942
  Bme:  BMEI0340 BMEI0786 BMEII0036
  Mlo:  mll2368 mll2374_2 mll3244_2 mll3887 mlr0220 mlr0358 mlr2412_2
  Ccr:  CC0201 CC0747_2 CC2845 CC3229 CC3494_2
  Rpr:  RP771
  Rco:  RC1200
  Ctr:  CT600
  Cpn:  CPn0781
  Tpa:  TP0292 TP0624_2
  Bbu:  BB0167
_______

[S] COG2886 Uncharacterized small protein
  Afu:  AF0100 AF0597
  Hbs:  VNG0066H
  Pho:  PH1135
  Pab:  PAB0720
  Pya:  PAE0976
  Ape:  APES040
  Syn:  ssl1255
  Nos:  asl0399 asl2805
_______

[L] COG2887 RecB family exonuclease
  Mac:  MA2359_2
  Ape:  APE0373
  Cgl:  Cgl0751_2 Cgl0752_2 Cgl1464
  Mtu:  Rv2119 Rv3201c_2 Rv3202c_2
  MtC:  MT2179 MT3295_2 MT3296_2
  Mle:  ML1312
  Rso:  RSc1189_2
  Hpy:  HP1089_2
  jHp:  jhp0336_2
  Cje:  Cj1482c_2
  Atu:  AGc40_2
  Sme:  SMc02759_2
  Bme:  BMEI2024_2
  Mlo:  mll5084_2
  Ccr:  CC3537_2
  Rpr:  RP403_2
  Rco:  RC0550_2
  Tpa:  TP0899
_______

[J] COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation
  Afu:  AF0573
  Hbs:  VNG1173a
  Mac:  MA1472
  Mth:  MTH1698a
  Mja:  MJ0458.1
  Mka:  MK0256
  Tac:  Ta0567
  Tvo:  TVN0619
  Pho:  PH0026a
  Pab:  PAB0018a
  Pya:  PAE0694
  Sso:  SSO5343
  Ape:  APE2480a
_______

[J] COG2890 Methylase of polypeptide chain release factors
  Afu:  AF1784
  Hbs:  VNG1163G
  Mac:  MA1440
  Mth:  MTH1329
  Mja:  MJ0928
  Mka:  MK1491
  Tac:  Ta0114
  Tvo:  TVN0191
  Pho:  PH1731
  Pab:  PAB0284
  Pya:  PAE2224
  Sso:  SSO0748
  Ape:  APE0554
  Sce:  YDR140w YNL063w
  Spo:  SPAC29B12.05c SPAC323.05c
  Ecu:  ECU06g0610
  Aae:  aq_099
  Tma:  TM0488
  Fnu:  FN1331
  Dra:  DR0245
  Cac:  CAC2885
  Cgl:  Cgl1175 Cgl1871
  Mtu:  Rv1300
  MtC:  MT1339
  Mle:  ML1135
  Lla:  L188472
  Spy:  SPy1142
  Spn:  SP1021
  Sau:  SA1919
  Lin:  lin2686
  Bsu:  BS_ywkE
  Bha:  BH3774
  Syn:  sll1237
  Nos:  alr0115 alr0720
  Eco:  hemK yfcB
  EcZ:  ZhemK ZyfcB
  Ecs:  ECs1717 ECs3215
  Ype:  YPO2018 YPO2750
  Sty:  STM1775 STM2385
  Buc:  BU172
  Vch:  VC2118 VC2178
  Pae:  PA1678 PA2179 PA4664
  Hin:  HI1201 HI1559
  Pmu:  PM0390 PM0556
  Xfa:  XF1368 XF1512
  Nme:  NMB1232 NMB1655 NMB2065
  NmA:  NMA0369 NMA1400 NMA1912
  Rso:  RSc1388 RSc2903 RSc3159
  Hpy:  HP0381
  jHp:  jhp1000
  Cje:  Cj0722c
  Atu:  AGl1352
  Sme:  SMb21514 SMc02435
  Bme:  BMEI0192
  Mlo:  mll3434 mlr6740
  Ccr:  CC0875
  Rpr:  RP847_1
  Rco:  RC1314_1
  Ctr:  CT024
  Cpn:  CPn0114
  Tpa:  TP0052
  Bbu:  BB0197
  Uur:  UU004m
  Mpu:  MYPU_1060
  Mpn:  MPN362_1
  Mge:  MG259_1
_______

[M] COG2891 Cell shape-determining protein
  Lla:  L98132
  Spn:  SP2217
  Sau:  SA1474
  Lin:  lin1581
  Bsu:  BS_mreD
  Bha:  BH3029
  Nos:  all0085
  Eco:  mreD
  EcZ:  ZmreD
  Ecs:  ECs4121
  Ype:  YPO3667
  Sty:  STM3372
  Vch:  VC0417
  Pae:  PA4479
  Hin:  HI0039
  Pmu:  PM1957
  Xfa:  XF1311
  Rso:  RSc0061
  Tpa:  TP0499
_______

[S] COG2892 Uncharacterized protein conserved in archaea
  Afu:  AF1149a
  Mac:  MA1740
  Mth:  MTH679
  Mja:  MJ0594a
  Mka:  MK0376
  Pho:  PH1899a
  Pab:  PAB3073
  Ape:  APE1440a
_______

[G] COG2893 Phosphotransferase system, mannose/fructose-specific component IIA
  Fnu:  FN0632
  Cac:  CAC1457 CAP0066_1
  Lla:  L1762179_1
  Spy:  SPy0634 SPy1057 SPy1738_1
  Spn:  SP0064 SP0284_1 SP0321 SP2164
  Lin:  lin0020 lin0143_1 lin0777 lin2105
  Bsu:  BS_levD
  Eco:  manX_1 yadI
  EcZ:  Z4488 Z5617 ZmanX_1 ZyadI
  Ecs:  ECs0133 ECs2527_1 ECs4014 ECs5002
  Ype:  YPO0837 YPO1758_1
  Sty:  STM0178 STM0577 STM1830_1 STM3772 STM4535
  Pmu:  PM0834_1
  Xfa:  XF1404
  Nme:  NMB2046
  NmA:  NMA0390
  Rso:  RSc0346
  Atu:  AGc50
  Sme:  SMc02753
  Bme:  BMEI2032
  Mlo:  mll5091
  Ccr:  CC0240
_______

[D] COG2894 Septum formation inhibitor-activating ATPase
  Aae:  aq_877
  Tma:  TM1870
  Fnu:  FN0176
  Dra:  DR0752
  Cac:  CAC1249
  Lin:  lin1579
  Bsu:  BS_minD
  Bha:  BH3027
  Syn:  sll0289
  Nos:  alr3456
  Eco:  minD
  EcZ:  ZminD
  Ecs:  ECs1669
  Ype:  YPO2077
  Sty:  STM1815
  Buc:  BU326
  Vch:  VC1960
  Pae:  PA3244
  Xfa:  XF1321
  Nme:  NMB0171
  NmA:  NMA0100
  Rso:  RSc3365
  Hpy:  HP0331
  jHp:  jhp0314
  Atu:  AGl3133
  Sme:  SMb21523
  Bme:  BMEII0926
  Mlo:  mll1950
_______

[P] COG2895 GTPases - Sulfate adenylate transferase subunit 1
  Cac:  CAC0110
  Cgl:  Cgl2753
  Mtu:  Rv1286_1
  MtC:  MT1324_1
  Eco:  cysN
  EcZ:  ZcysN
  Ecs:  ECs3605
  Ype:  YPO3365
  Sty:  STM2934
  Buc:  BU423
  Vch:  VC2559
  Pae:  PA4442_1
  Xfa:  XF1501_1
  Nme:  NMB1153 NMB1191
  NmA:  NMA1364
  Rso:  RSc2421
  Atu:  AGc1495
  Sme:  SMa0857_1 SMb21224_1 SMc00090
  Bme:  BMEI1754_1
  Mlo:  mlr7576_1
  Ccr:  CC1482_1
_______

[H] COG2896 Molybdenum cofactor biosynthesis enzyme
  Afu:  AF2006
  Hbs:  VNG0085G
  Mac:  MA0105
  Mth:  MTH1550 MTH62
  Mja:  MJ0824 MJ1632
  Mka:  MK0482_1 MK1540
  Tac:  Ta0443
  Tvo:  TVN1052
  Pho:  PH0114
  Pab:  PAB2273
  Pya:  PAE0814
  Sso:  SSO0362
  Ape:  APE0478
  Aae:  aq_2183
  Dra:  DR0266
  Cac:  CAC1993
  Cgl:  Cgl1171
  Mtu:  Rv0869c Rv3109
  MtC:  MT0892 MT3192 MT3427
  Sau:  SA2063
  Lin:  lin1039
  Bsu:  BS_narA
  Bha:  BH2526
  Syn:  slr0901
  Nos:  all3865
  Eco:  moaA
  EcZ:  ZmoaA
  Ecs:  ECs0859
  Ype:  YPO1159
  Sty:  STM0802
  Vch:  VC1024
  Pae:  PA1505 PA3870
  Hin:  HI1676
  Pmu:  PM0625
  Rso:  RSc1039
  Hpy:  HP0768
  jHp:  jhp0705
  Cje:  Cj0161c
  Atu:  AGc3114
  Sme:  SMc00144
  Bme:  BMEI1019
  Mlo:  mlr0541
  Ccr:  CC0018
_______

[P] COG2897 Rhodanese-related sulfurtransferase
  Hbs:  VNG2393G VNG2394G
  Mth:  MTH622
  Pya:  PAE2582 PAE2733
  Sso:  SSO1019 SSO1817
  Ape:  APE2595
  Sce:  YOR251c
  Spo:  SPCC4B3.01 SPCP25A2.01c
  Aae:  aq_1076 aq_1799
  Dra:  DR0217 DR2531
  Cgl:  Cgl0681 Cgl1390 Cgl2717
  Mtu:  Rv0815c Rv2291 Rv3117 Rv3283
  MtC:  MT0837 MT2348 MT3199 MT3382
  Mle:  ML0728 ML2198
  Bha:  BH1708
  Nos:  all0903 all3918
  Eco:  sseA ynjE
  EcZ:  Z2789 ZsseA
  Ecs:  ECs2463 ECs3387
  Ype:  YPO1194
  Sty:  STM2533
  Vch:  VCA0620
  Pae:  PA1292 PA4956
  Rso:  RSc2226
  Atu:  AGc2243_1
  Sme:  SMb21549 SMc01172
  Bme:  BMEI0931
  Mlo:  mlr0355
  Ccr:  CC1425
_______

[S] COG2898 Uncharacterized conserved protein
  Mac:  MA2695_2
  Cgl:  Cgl0941
  Mtu:  Rv1619 Rv1640c_1
  MtC:  MT1655 MT1678_1
  Mle:  ML1393_1
  Lla:  L129283_1
  Sau:  SA1193_2
  Lin:  lin1803_2
  Bsu:  BS_yfiX
  Pae:  PA0920_2
  Xfa:  XF1641_2
  Rso:  RSp1522_2
  Atu:  AGc4580_2
  Sme:  SMc00611_2
  Bme:  BMEII0682_2
  Mlo:  mll4560
  Ccr:  CC2047
_______

[S] COG2899 Uncharacterized protein conserved in bacteria
  Dra:  DR2226
  Mtu:  Rv3629c
  MtC:  MT3731
  Mle:  ML0205
  Lla:  L99421
  Xfa:  XF1192
  Atu:  AGc359
  Sme:  SMb21468
  Bme:  BMEI0545
_______

[S] COG2900 Uncharacterized protein conserved in bacteria
  Eco:  slyX
  EcZ:  ZslyX
  Ecs:  ECs4199
  Ype:  YPO0194
  Sty:  STM3454
  Vch:  VC0352
  Pae:  PA0960
  Hin:  HI0573
  Pmu:  PM1348
  Xfa:  XF1607
  Nme:  NMB2063
  NmA:  NMA0371
  Atu:  AGc187
  Sme:  SMc02883
  Bme:  BMEII0231
  Mlo:  msl3152
_______

[KL] COG2901 Factor for inversion stimulation Fis, transcriptional activator
  Eco:  fis
  EcZ:  Zfis
  Ecs:  ECs4133
  Ype:  YPO3654
  Sty:  STM3385
  Buc:  BU400
  Vch:  VC0290
  Pae:  PA4853
  Hin:  HI0980
  Pmu:  PM1086
  Xfa:  XF1998
  Nme:  NMB1420
  NmA:  NMA1632
  Rso:  RSc0505
_______

[E] COG2902 NAD-specific glutamate dehydrogenase
  Sce:  YDL215c
  Spo:  SPCC132.04c
  Mtu:  Rv2476c
  MtC:  MT2551
  Mle:  ML1249
  Vch:  VC1492
  Pae:  PA3068
  Xfa:  XF2091
  Atu:  AGc5015
  Sme:  SMc04085
  Bme:  BMEI0231
  Mlo:  mll4104
  Ccr:  CC0088
  Rpr:  RP758
  Rco:  RC1174
_______

[S] COG2904 Uncharacterized protein conserved in bacteria
  Eco:  yqcD_1
  EcZ:  ZyqcD_1
  Ecs:  ECs3654_1
  Ype:  YPO1034_1
  Sty:  STM2968_1
  Vch:  VC0902_1
  Pae:  PA2806_1
  Hin:  HI1291_1 HI1340_1
  Pmu:  PM0476_1
  Xfa:  XF2383_1
  Rso:  RSc0448_1
  Rpr:  RP072_1
  Rco:  RC0102_1
_______

[T] COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains
  Afu:  AF0971
  Aae:  aq_2107
  Cgl:  Cgl1258
  Bha:  BH3742 BH3833
  Vch:  VC0300 VC1291
  Pae:  PA3233
_______

[P] COG2906 Bacterioferritin-associated ferredoxin
  MtC:  MT1924.1
  Syn:  ssl2250
  Eco:  bfd
  EcZ:  ZyheA
  Ype:  YPO0205
  Sty:  STM3444
  Vch:  VC0364
  Pae:  PA3530
  Xfa:  XF0394
  Nme:  NMB0752
  NmA:  NMA0965
  Rso:  RSc0349
  Ccr:  CC3263
_______

[R] COG2907 Predicted NAD/FAD-binding protein
  Mtu:  Rv0449c
  MtC:  MT0465
  Vch:  VC1120
  Nme:  NMB1128 NMB1166
  NmA:  NMA1338
  Atu:  AGc3599
  Mlo:  mll8087
  Ccr:  CC2600
_______

[S] COG2908 Uncharacterized protein conserved in bacteria
  Tma:  TM0737
  Eco:  ybbF
  EcZ:  ZybbF
  Ecs:  ECs0586
  Ype:  YPO3075
  Sty:  STM0535
  Vch:  VC1850
  Pae:  PA1792 PA3219
  Hin:  HI0735
  Pmu:  PM0102
  Xfa:  XF2588
  Nme:  NMB0544
  NmA:  NMA0723
  Rso:  RSc1163 RSc2083
  Hpy:  HP0394
  jHp:  jhp0987
  Cje:  Cj0286c
  Atu:  AGc3038
  Sme:  SMc00171
  Mlo:  mll0806
  Ccr:  CC3344
_______

[K] COG2909 ATP-dependent transcriptional regulator
  Cac:  CAC3611
  Mtu:  Rv3080c_2
  MtC:  MT3165_2
  Eco:  malT
  EcZ:  ZmalT
  Ecs:  ECs4260
  Ype:  YPO0123
  Sty:  STM3515
  Vch:  VCA0011
  Pae:  PA1759 PA1760 PA3420 PA3921
_______

[R] COG2910 Putative NADH-flavin reductase
  Lla:  L3272
  Spn:  SP1627
  Lin:  lin0787
  Bsu:  BS_ywnB
  Vch:  VCA1054
  Pae:  PA0741
  Rso:  RSp0525
  Cje:  Cj1555c
  Atu:  AGc3633
  Sme:  SMa2099
  Mlo:  mll3416
_______

[S] COG2911 Uncharacterized protein conserved in bacteria
  Eco:  ytfN
  EcZ:  ZytfN
  Ecs:  ECs5199
  Ype:  YPO3523
  Sty:  STM4410
  Buc:  BU087
  Vch:  VC2547
  Pae:  PA2542
  Hin:  HI0696
  Pmu:  PM1808
  Xfa:  XF1232
  Nme:  NMB2135
  NmA:  NMA0295
  Rso:  RSc2383
  Atu:  AGc4743
  Sme:  SMc03096
  Bme:  BMEI1894
  Mlo:  mll1661
  Ccr:  CC1604
_______

[S] COG2912 Uncharacterized conserved protein
  Nos:  alr0024
  Eco:  ychA
  EcZ:  ZychA
  Ecs:  ECs1719
  Ype:  YPO2020
  Sty:  STM1773
  Buc:  BU173
  Vch:  VC2176
  Pae:  PA3419
  Hin:  HI1558
  Pmu:  PM0557
  Xfa:  XF1494
  Rso:  RSc2558
  Ccr:  CC0142
  Ctr:  CT114_1
  Cpn:  CPn0145_1
_______

[J] COG2913 Small protein A (tmRNA-binding)
  Eco:  smpA
  EcZ:  ZsmpA
  Ecs:  ECs3479
  Ype:  YPO1104
  Sty:  STM2685
  Buc:  BU186
  Vch:  VC0851
  Pae:  PA4765
  Hin:  HI0838
  Pmu:  PM0586_1 PM1886
  Xfa:  XF2345
  Nme:  NMB0204 NMB1898
  NmA:  NMA0065 NMA0557
  Rso:  RSc2746
  Atu:  AGc2171
  Sme:  SMc01781
  Bme:  BMEI1184
  Mlo:  mll8419
  Ccr:  CC1365
  Rpr:  RP774
  Rco:  RC1204
_______

[S] COG2914 Uncharacterized protein conserved in bacteria
  Eco:  yfjF
  EcZ:  Z3911
  Ecs:  ECs3480
  Ype:  YPO1103
  Sty:  STM2686
  Buc:  BU253
  Vch:  VC0850
  Pae:  PA4766
  Hin:  HI0395
  Pmu:  PM0166
  Xfa:  XF2346
  Nme:  NMB0796
  NmA:  NMA1005
  Rso:  RSc1426
_______

[R] COG2915 Uncharacterized protein involved in purine metabolism
  Eco:  ycfC
  EcZ:  ZycfC
  Ecs:  ECs1604
  Ype:  YPO1637
  Sty:  STM1233
  Buc:  BU262
  Vch:  VC1127
  Pae:  PA2627
  Hin:  HI0638
  Pmu:  PM1850
  Xfa:  XF1439
_______

[R] COG2916 DNA-binding protein H-NS
  Eco:  hns stpA
  EcZ:  Z5140 Zhns ZstpA
  Ecs:  ECs1739 ECs3530 ECs4588
  Ype:  YPO2175
  Sty:  STM1751 STM2799
  Buc:  BU272
  Vch:  VC1130
  Hin:  HI1587
  Pmu:  PM0872
  Xfa:  XF0446 XF0749 XF1493
  Rso:  RSc0867 RSp0029 RSp0335 RSp1033 RSp1098
_______

[D] COG2917 Intracellular septation protein A
  Eco:  yciB
  EcZ:  ZyciB
  Ecs:  ECs1754
  Ype:  YPO2196
  Sty:  STM1735
  Buc:  BU275
  Vch:  VC1700
  Pae:  PA3201
  Hin:  HI0826
  Pmu:  PM0329
  Nme:  NMB0342
  NmA:  NMA2145
  Rso:  RSc1746
  Sme:  SMc03853
  Bme:  BMEI0130
  Mlo:  mlr4321
  Ccr:  CC3678
  Rpr:  RP392
  Rco:  RC0539
_______

[H] COG2918 Gamma-glutamylcysteine synthetase
  Cac:  CAC1539
  Lin:  lin2913_1
  Eco:  gshA
  EcZ:  ZgshA
  Ecs:  ECs3550
  Ype:  YPO3301
  Sty:  STM2818
  Buc:  BU407
  Vch:  VC0556
  Pae:  PA5203
  Pmu:  PM1048_1
_______

[D] COG2919 Septum formation initiator
  Cgl:  Cgl0950
  Mtu:  Rv1024
  MtC:  MT1052
  Mle:  ML0256
  Lla:  L21634
  Spy:  SPy0010
  Spn:  SP0008
  Sau:  SA0465
  Lin:  lin0249
  Bsu:  BS_divIC
  Bha:  BH0076
  Eco:  ygbQ
  EcZ:  Z4056
  Ecs:  ECs3602
  Ype:  YPO3362
  Sty:  STM2931
  Buc:  BU421
  Vch:  VC0527
  Pae:  PA3634
  Hin:  HI0673
  Pmu:  PM1607
  Xfa:  XF1292
  Nme:  NMB1286
  NmA:  NMA1496
  Rso:  RSc1130
  Atu:  AGc2633
  Sme:  SMc01029
  Bme:  BMEI0853
  Mlo:  mlr0382
  Ccr:  CC1725
  Rpr:  RP423
  Rco:  RC0588
  Tpa:  TP0181
  Bbu:  BB0748
_______

[P] COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit
  Afu:  AF2228
  Pya:  PAE2566
  Eco:  yccK
  EcZ:  ZyccK
  Ecs:  ECs1053
  Ype:  YPO1447
  Sty:  STM1084
  Buc:  BU467
  Vch:  VC1356
  Pae:  PA2608
  Hin:  HI1371
  Pmu:  PM0401
_______

[S] COG2921 Uncharacterized conserved protein
  Eco:  ybeD
  EcZ:  ZybeD
  Ecs:  ECs0669
  Ype:  YPO2600
  Sty:  STM0636
  Buc:  BU488
  Vch:  VC0945
  Pae:  PA3998
  Hin:  HI0028
  Pmu:  PM1928
  Xfa:  XF1271
  Nme:  NMB1218
  NmA:  NMA1380
  Rso:  RSc0326
_______

[S] COG2922 Uncharacterized protein conserved in bacteria
  Eco:  smg
  EcZ:  Zsmg
  Ecs:  ECs4150
  Ype:  YPO0244
  Sty:  STM3404
  Buc:  BU495
  Vch:  VC0049
  Xfa:  XF0923
  Nme:  NMB0117
  NmA:  NMA0157
_______

[P] COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur
  Mac:  MA3927
  Mth:  MTH1358
  Tma:  TM0980
  Eco:  yheM
  EcZ:  ZyheM
  Ecs:  ECs4195
  Ype:  YPO0198
  Sty:  STM3450
  Buc:  BU531
  Vch:  VC0357
  Pae:  PA2606
  Hin:  HI0576.1
  Pmu:  PM1352
_______

[CO] COG2924 Fe-S cluster protector protein
  Eco:  yggX
  EcZ:  ZyggX
  Ecs:  ECs3838
  Ype:  YPO0953
  Sty:  STM3111
  Buc:  BU553
  Vch:  VC0451
  Pae:  PA5148
  Hin:  HI0760
  Pmu:  PM1320
  Xfa:  XF1908
  Nme:  NMB2021
  NmA:  NMA0419
  Rso:  RSc1235
_______

[L] COG2925 Exonuclease I
  Eco:  sbcB
  EcZ:  ZsbcB
  Ecs:  ECs2813
  Ype:  YPO1558
  Sty:  STM2067
  Buc:  BU555
  Vch:  VC1234
  Pae:  PA4316
  Hin:  HI1377
  Pmu:  PM0611
  Xfa:  XF2022
  Rso:  RSc3125
_______

[S] COG2926 Uncharacterized protein conserved in bacteria
  Fnu:  FN0411
  Eco:  yeeX
  EcZ:  ZyeeX
  Ecs:  ECs2809
  Ype:  YPO1560
  Sty:  STM2059
  Buc:  BU556
  Vch:  VCA0741
  Hin:  HI1168
  Pmu:  PM0836
_______

[L] COG2927 DNA polymerase III, chi subunit
  Eco:  holC
  EcZ:  ZholC
  Ecs:  ECs5236
  Ype:  YPO3442
  Sty:  STM4476
  Vch:  VC2502
  Pae:  PA3832
  Hin:  HI1397
  Pmu:  PM0822
  Xfa:  XF0136
  Nme:  NMB1568
  NmA:  NMA1757
  Rso:  RSc2414
  Atu:  AGc2056
  Sme:  SMc00586
  Bme:  BMEI1260
  Mlo:  mlr7869
  Ccr:  CC1693
  Rpr:  RP872
  Rco:  RC1346
_______

[S] COG2928 Uncharacterized conserved protein
  Hbs:  VNG2121C
  Fnu:  FN1485
  Bha:  BH1365
  Nos:  all1761
  Pae:  PA5151
  Xfa:  XF0199
  Nme:  NMB0465
  NmA:  NMA2020
  Rso:  RSc0465
  Atu:  AGc3280
  Sme:  SMc00229
  Mlo:  mll0832
  Ctr:  CT421
  Cpn:  CPn0506
_______

[S] COG2929 Uncharacterized protein conserved in bacteria
  Syn:  sll1965
  Nos:  asl2195 asl4138 asr0755
  Sty:  STM4528
  Vch:  VCA0332
  Xfa:  XF0533 XF1562
  Nme:  NMB1118
  NmA:  NMA1327
  Sme:  SMc04431
  Bme:  BMEI1004
  Ccr:  CC0489
_______

[S] COG2930 Uncharacterized conserved protein
  Sce:  YFR024c-a_1 YFR024c_1 YHR016c_1
  Spo:  SPAPJ696.02_1
  Tma:  TM0696
  Xfa:  XF0565
  Rso:  RSc1878
_______

[Q] COG2931 RTX toxins and related Ca2+-binding proteins
  Aae:  aq_1091
  Syn:  sll0721_1 sll1009 sll1951 slr1403_2
  Nos:  all0274_1 all0275_4 all0364_3 all2654_2 all2655_2 all3346 all7128_2
        alr0276_3 alr0290_2 alr0791 alr1403 alr3659 alr4072 alr4238_4
        alr7304_2
  Ype:  YPO0947 YPO3973
  Vch:  VC1451
  Pae:  PA1249
  Xfa:  XF0668 XF1011 XF2407 XF2759
  Nme:  NMB0365 NMB0585 NMB1405 NMB1409 NMB1415
  NmA:  NMA0787 NMA1625 NMA1626 NMA2123
  Rso:  RSc0102 RSc0104 RSc0246 RSc0249 RSp0294 RSp0295
  Atu:  AGc4905 AGl2532_1 AGl909_2
  Sme:  SMa0034 SMa1587_1 SMa2111 SMb20079 SMb20829 SMb20838 SMb20932_1
        SMb21229 SMb21314 SMb21397 SMb21402 SMb21496 SMb21543 SMc00286
        SMc01182 SMc03108 SMc04171
  Mlo:  mll1028 mll2585_1 mll6750_2
  Ccr:  CC0746 CC1007 CC2075 CC2610
_______

[K] COG2932 Predicted transcriptional regulator
  Fnu:  FN1589
  Lla:  L102100_2
  Spy:  SPy0657_2 SPy0939_2 SPy1198_2 SPy1486_2 SPy2125_2
  Sau:  SA1805_2
  EcZ:  Z1447_2
  Sty:  STM0898 STM2738
  Pae:  PA0611 PA0906
  Hin:  HI1476
  Pmu:  PM0417
  Xfa:  XF0696 XF1658 XF2511
  Nme:  NMB0556 NMB0910 NMB1078 NMB1079
  NmA:  NMA0738 NMA1884
  Atu:  AGc784_2 AGc858
  Sme:  SMc02223 SMc04198_2
  Bme:  BMEII0498
  Mlo:  mll8500 mlr2136_2 mlr5631
  Ccr:  CC0082
_______

[R] COG2933 Predicted SAM-dependent methyltransferase
  Eco:  ygdE
  EcZ:  ZygdE
  Ecs:  ECs3666
  Ype:  YPO1031
  Sty:  STM2980
  Pae:  PA1563
  Hin:  HI1195m
  Pmu:  PM0568
  Xfa:  XF0748
_______

[O] COG2935 Putative arginyl-tRNA:protein arginylyltransferase
  Sce:  YGL017w
  Spo:  SPAC3C7.07c
  Vch:  VC1736
  Pae:  PA2618
  Xfa:  XF1018
  Rso:  RSc1616
  Cje:  Cj1035c
  Atu:  AGc2146
  Sme:  SMc01764
  Bme:  BMEI1199
  Mlo:  mll8364
  Ccr:  CC1572
_______

[R] COG2936 Predicted acyl esterases
  Mtu:  Rv1215c Rv1835c Rv2800
  MtC:  MT1253 MT2868
  Lla:  L61341
  Sau:  SA2380
  Lin:  lin2898
  Syn:  slr1771
  Xfa:  XF1029
  Sme:  SMb21424 SMc01648
  Mlo:  mll5128 mlr6999
  Ccr:  CC0940 CC1622
_______

[I] COG2937 Glycerol-3-phosphate O-acyltransferase
  Mtu:  Rv1551 Rv2482c
  MtC:  MT1601 MT2555
  Mle:  ML1246
  Eco:  plsB
  EcZ:  ZplsB
  Ecs:  ECs5024
  Ype:  YPO0312
  Sty:  STM4235
  Vch:  VC0093
  Pae:  PA3673
  Hin:  HI0748
  Pmu:  PM1182
  Xfa:  XF1031
_______

[S] COG2938 Uncharacterized conserved protein
  Sce:  YOL071w
  Spo:  SPAC12B10.06c
  Eco:  ygfY
  EcZ:  ZygfY
  Ecs:  ECs3769
  Ype:  YPO0897
  Sty:  STM3047
  Vch:  VC2471
  Pae:  PA0760
  Hin:  HI0627
  Pmu:  PM1790
  Xfa:  XF1074
  Nme:  NMB0952
  NmA:  NMA1147
  Rso:  RSc1992
  Atu:  AGc3272
  Sme:  SMc00227
  Bme:  BMEII0687
  Mlo:  msl0828
  Ccr:  CC1845
  Rpr:  RP599
  Rco:  RC0914
_______

[E] COG2939 Carboxypeptidase C (cathepsin A)
  Sce:  YBR139w YGL203c YMR297w
  Spo:  SPAC1296.03c SPAC19G12.10c_2 SPBC16G5.09
  Dra:  DR0964
  Xfa:  XF1282
  Rso:  RSc1003
  Ccr:  CC3418
_______

[R] COG2940 Proteins containing SET domain
  Mac:  MA1679
  Sce:  YHR119w YHR207c YJL105w YJL168c YKR029c YPL165c
  Spo:  SPAC22E12.11c SPAC29B12.02c SPBC428.08c SPBP8B7.07c SPCC1739.05 SPCC297.04c SPCC306.04c
        SPCC4B3.12
  Ecu:  ECU09g1750
  Xfa:  XF1478
  Rso:  RSc3358
  Mlo:  mll7640 mlr3116
  Ctr:  CT737
  Cpn:  CPn0878
_______

[H] COG2941 Ubiquinone biosynthesis protein COQ7
  Sce:  YOR125c
  Spo:  SPBC337.15c
  Pae:  PA0655
  Xfa:  XF1538
  Rso:  RSc2854
  Ccr:  CC2197
  Rpr:  RP190
  Rco:  RC0239
_______

[G] COG2942 N-acyl-D-glucosamine 2-epimerase
  Syn:  slr1975
  Nos:  all3695
  Eco:  yihS
  EcZ:  ZyihS
  Ecs:  ECs4803
  Sty:  STM4021
  Xfa:  XF1611
  Rso:  RSc3058
  Atu:  AGc3910 AGl3017
  Sme:  SMa0058 SMb21082_2 SMc03111
  Bme:  BMEI1394
  Mlo:  mlr7607_2
  Ccr:  CC3617
_______

[M] COG2943 Membrane glycosyltransferase
  Eco:  mdoH
  EcZ:  ZmdoH
  Ecs:  ECs1427
  Sty:  STM1151
  Vch:  VC1287
  Pae:  PA5077
  Xfa:  XF1623
  Rso:  RSc2909
  Ccr:  CC2018
_______

[K] COG2944 Predicted transcriptional regulator
  Nos:  all1719
  Eco:  yiaG
  EcZ:  Z1059 Z5151 ZyiaG
  Ecs:  ECs4440 ECs4598
  Sty:  STM3648 STM3778 STM4033
  Vch:  VCA0469
  Xfa:  XF1710 XF2110
  Nme:  NMB1891
  NmA:  NMA0564
  Rso:  RSc0125
  Atu:  AGc3184
  Sme:  SMa2151 SMc01836
  Rco:  RC1223
_______

[R] COG2945 Predicted hydrolase of the alpha/beta superfamily
  Afu:  AF0514
  Hbs:  VNG1833C
  Pae:  PA4440
  Xfa:  XF1829
  Nme:  NMB0868
  NmA:  NMA1086
  Rso:  RSc0328
  Atu:  AGc3351
  Sme:  SMc00528
  Bme:  BMEI1044
  Mlo:  mll0014
  Ccr:  CC1867
  Rpr:  RP471
  Rco:  RC0713
_______

[L] COG2946 Putative phage replication protein RstA
  Bsu:  BS_ydcR
  Vch:  VC1454 VC1463
  Xfa:  XF1859
  Nme:  NMB1543 NMB1634
  NmA:  NMA0782 NMA1167 NMA1792 NMA1999
_______

[S] COG2947 Uncharacterized conserved protein
  Spo:  SPBC21.03c
  Dra:  DR0566
  Syn:  slr1468
  Nos:  all0984
  Pae:  PA5229
  Xfa:  XF2014
  Rso:  RSc2403
  Atu:  AGc4801
  Sme:  SMc03227
  Bme:  BMEI0172
  Mlo:  mlr4228
_______

[U] COG2948 Type IV secretory pathway, VirB10 components
  Xfa:  XF2049 XFa0014 XFa0040
  Rso:  RSc2575 RSp0179
  Hpy:  HP0041 HP0042 HP0527_2
  jHp:  jhp0036 jhp0476_2
  Atu:  AGpA231 AGpT13 AGpT71
  Sme:  SMa1303
  Bme:  BMEII0034
  Mlo:  mll9603 mlr6405 mlr6955 mlr9259
  Ccr:  CC2422 CC2685
  Rpr:  RP291
  Rco:  RC0389
_______

[S] COG2949 Uncharacterized membrane protein
  Dra:  DR0187
  Nos:  all7616
  Eco:  sanA ygjQ
  EcZ:  ZsanA ZygjQ
  Ecs:  ECs3036 ECs3968
  Ype:  YPO1510
  Sty:  STM2184 STM3222
  Vch:  VC1186
  Hin:  HI1262
  Pmu:  PM0867
_______

[M] COG2951 Membrane-bound lytic murein transglycosylase B
  Cgl:  Cgl0948
  Mtu:  Rv1022 Rv1230c
  MtC:  MT1050 MT1268
  Eco:  mltB
  EcZ:  ZmltB
  Ecs:  ECs3558
  Ype:  YPO2081 YPO2957
  Sty:  STM2831
  Vch:  VC1956
  Pae:  PA1171 PA3992 PA4001 PA4444
  Pmu:  PM0513
  Xfa:  XF2184
  Nme:  NMB1279
  NmA:  NMA1488
  Rso:  RSc0918 RSp1240
  Atu:  AGc140 AGc3849 AGc4522 AGl2112
  Sme:  SMa2033 SMc01845 SMc02909 SMc04024 SMc04411
  Bme:  BMEI0223 BMEI0561 BMEI1911 BMEII0024
  Mlo:  mll4372 mlr1581 mlr3027 mlr5511
  Ccr:  CC3322
_______

[S] COG2952 Uncharacterized protein conserved in bacteria
  Aae:  aq_1752
  Hpy:  HP1236
  jHp:  jhp1157
  Cje:  Cj1495c
_______

[S] COG2954 Uncharacterized protein conserved in bacteria
  Syn:  sgl0001 slr0698 ssl1045
  Nos:  all4694
  Xfa:  XF2357
  Nme:  NMB0309
  NmA:  NMA2178
  Atu:  AGl752
  Sme:  SMc03154
  Mlo:  mll4592
_______

[G] COG2956 Predicted N-acetylglucosaminyl transferase
  Eco:  yciM
  EcZ:  ZyciM
  Ecs:  ECs1853
  Ype:  YPO2225
  Sty:  STM1708
  Vch:  VC1912
  Hin:  HI1223
  Pmu:  PM0798
  Xfa:  XF2435
  Nme:  NMB0339
  NmA:  NMA2148
  Rso:  RSc0912
_______

[E] COG2957 Peptidylarginine deiminase and related enzymes
  Dra:  DR2359
  Lla:  L136332
  Spn:  SP0921
  Ype:  YPO0939
  Pae:  PA0292
  Xfa:  XF2442
  Hpy:  HP0049
  jHp:  jhp0042
  Cje:  Cj0949c
  Ccr:  CC0211
_______

[S] COG2958 Uncharacterized protein conserved in bacteria
  Pae:  PA2730
  Xfa:  XF2747
  Rso:  RSc0886
  Hpy:  HP0852
  jHp:  jhp0788
  Cje:  Cj1602
_______

[H] COG2959 Uncharacterized enzyme of heme biosynthesis
  Eco:  hemX
  EcZ:  ZhemX
  Ecs:  ECs4733
  Ype:  YPO3851
  Sty:  STM3936
  Vch:  VC0118
  Pae:  PA5258
  Hin:  HI0603m
  Pmu:  PM1814
  Nme:  NMB0778
  NmA:  NMA0989
  Rso:  RSc2356_2
_______

[S] COG2960 Uncharacterized protein conserved in bacteria
  Eco:  yqiC
  EcZ:  Z4400
  Ecs:  ECs3930
  Ype:  YPO0656
  Sty:  STM3196
  Vch:  VC0163
  Pae:  PA5289
  Xfa:  XF1178
  Nme:  NMB0404
  NmA:  NMA2081
  Rso:  RSc0340
  Atu:  AGc4019
  Sme:  SMc03744
  Bme:  BMEI0489
  Mlo:  mll2675
_______

[R] COG2961 Protein involved in catabolism of external DNA
  Eco:  yhiR
  EcZ:  ZyhiR
  Ecs:  ECs4371
  Ype:  YPO3976
  Sty:  STM3596
  Vch:  VC0187
  Pae:  PA5019
  Hin:  HI0441
  Pmu:  PM1234
  Xfa:  XF0043
  Nme:  NMB1061
  NmA:  NMA1260
  Rso:  RSc3368
  Atu:  AGc2101
  Sme:  SMc00608
  Bme:  BMEI1245
  Mlo:  mlr7888
  Ccr:  CC1096
  Rco:  RC1094
_______

[R] COG2962 Predicted permeases
  Cgl:  Cgl0133 Cgl2080
  Sau:  SA2487
  Lin:  lin0788
  Bsu:  BS_yojE
  Bha:  BH3866
  Eco:  rarD
  EcZ:  ZrarD
  Ecs:  ECs4749
  Ype:  YPO3836
  Sty:  STM2986 STM3955
  Vch:  VC0195
  Pae:  PA0485 PA3473
  Hin:  HI0223 HI0680
  Pmu:  PM1281
  Rso:  RSc0570
  Atu:  AGc1973
  Sme:  SMc02545
  Bme:  BMEI1269
  Mlo:  mlr7806
  Ccr:  CC0254
_______

[L] COG2963 Transposase and inactivated derivatives
  Tvo:  TVN0691 TVN0865
  Fnu:  FN0135 FN0485 FN0786 FN0840 FN1443 FN1887
  Dra:  DRB0019.1
  Cgl:  Cgl1688 Cgl1837 Cgl2705
  Mtu:  Rv0795 Rv1370c Rv1757c Rv1763 Rv2105 Rv2168c Rv2278
        Rv2354 Rv2480c Rv2648 Rv2815c Rv3184 Rv3186 Rv3325
        Rv3381c Rv3474
  MtC:  MT0414 MT1804 MT2882 MT3099
  Lla:  L129005 L131352 L137335 L138554 L140080 L140905 L155471
        L16826 L173048 L174282 L186703 L199247 L21385 L27434
        L28615 L36774 L37953 L38510 L425 L52494 L54760
        L651011 L76013 L87010 L91907 L93886
  Spy:  SPy0195 SPy0199 SPy0565_1 SPy1335
  Spn:  SP1596
  Sau:  SA0379
  Lin:  lin0664 lin0827 pli0025 pli0077
  Bha:  BH0334 BH0688 BH2342 BH3418 BH3445
  Eco:  b0298 b0373 b0540 b1027 b2088 yi21 yi21_g1
        yi21_g2 yi21_g3 yi21_g4 yi21_g5 yi5A yi91 yi91a
  EcZ:  Z0365 Z1150 Z1159 Z1199 Z1208 Z1222 Z1589
        Z1598 Z1639 Z1648 Z1661 Z1826 Z1927 Z1933
        Z1958 Z2074 Z2110 Z2375 Z2429 Z2804 Z2982
        Z3093 Z3154 Z3161 Z3299 Z3922 Z4315_2 Z4335
        Z4502 Z5088 Z5096 Z5879 Z6014
  Ecs:  ECs0328 ECs1089 ECs1102 ECs1209 ECs1309 ECs1328 ECs1337
        ECs1381 ECs1393 ECs1565 ECs1658 ECs1665 ECs1690 ECs1820
        ECs1919 ECs2220 ECs2222 ECs2477 ECs2637 ECs2744 ECs2789
        ECs2794 ECs2933 ECs2958 ECs3132 ECs3490 ECs3494 ECs3845
        ECs3846_2 ECs3863 ECs3867 ECs3871 ECs4024 ECs4535 ECs4545
        ECs5243
  Ype:  YPCD1.16c YPCD1.83c YPCD1.85 YPO0119 YPO0755 YPO0996 YPO3492
        YPO3592A YPO3702 YPO3931 YPO4046 YPO4091
  Sty:  STM0556 STM2768 STM3760
  Vch:  VC0256 VC1477 VC1790 VCA0372 VCA0507 VCA0792
  Pae:  PA0979 PA0983 PA1937
  Hin:  HI0112 HI1720
  Rso:  RSc0579 RSc1434 RSc1437 RSc1548 RSc1550 RSc1831 RSc2266
        RSc2268 RSc2314 RSc2332 RSc2335 RSc2409 RSc3090 RSp0461
        RSp0547 RSp0566
  Atu:  AGl548 AGl550 AGl9 AGpA530 AGpA536 AGpAbx152 AGpT284
  Sme:  SMa0445 SMa0722 SMa1030 SMa1615 SMa1623 SMa2191 SMb20543
        SMb20826 SMb20918 SMb21083 SMb21234 SMc01959 SMc02298 SMc03250
        SMc03278 SMc03293 SMc03295 SMc03301 SMc03898
  Bme:  BMEII0184 BMEII0227 BMEII0711
  Mlo:  mlr8759 msr5972 msr6149
  Ccr:  CC0625 CC2657 CC2728
_______

[S] COG2964 Uncharacterized protein conserved in bacteria
  Fnu:  FN1942
  Spy:  SPy0144
  Eco:  yheO
  EcZ:  ZyheO
  Ecs:  ECs4197
  Ype:  YPO0196 YPO0626 YPO1671
  Sty:  STM3452
  Vch:  VC0355
  Pae:  PA3864
  Hin:  HI0575
  Pmu:  PM1350
  Rso:  RSp1517
  Cje:  Cj1387c
  Sme:  SMa0496 SMc04327
_______

[L] COG2965 Primosomal replication protein N
  Eco:  priB
  EcZ:  ZpriB
  Ecs:  ECs5177
  Ype:  YPO3538
  Sty:  STM4392
  Vch:  VC0367
  Hin:  HI0546
  Pmu:  PM1179
  Nme:  NMB1322
  NmA:  NMA1536
  Rso:  RSc1308
_______

[S] COG2966 Uncharacterized conserved protein
  Mth:  MTH749_1
  Sce:  YJL107c YJL108c_1
  Spo:  SPAC16A10.01_1 SPAC7D4.12c_1
  Fnu:  FN0781
  Cac:  CAC2265
  Cgl:  Cgl2571_1
  Mtu:  Rv3737_1
  MtC:  MT3842_1
  Spn:  SP1731
  Sau:  SA0543 SA0700
  Lin:  lin0587
  Bha:  BH0081
  Eco:  yjjP
  EcZ:  ZyjjP
  Ecs:  ECs5324
  Ype:  YPO0484
  Sty:  STM4546
  Vch:  VC0438
  Hin:  HI0108_1
  Pmu:  PM1895
  Xfa:  XF1304_1
  Cje:  Cj1166c
_______

[P] COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport
  Dra:  DR0228
  Eco:  apaG
  EcZ:  ZapaG
  Ecs:  ECs0055
  Ype:  YPO0491
  Sty:  STM0089
  Vch:  VC0442
  Pae:  PA0591
  Xfa:  XF2149
  Rso:  RSc2878
  Atu:  AGc759
  Sme:  SMc02135
  Bme:  BMEI1618
  Mlo:  mll5649
  Ccr:  CC2239
_______

[S] COG2968 Uncharacterized conserved protein
  Hbs:  VNG2589C
  Mac:  MA0311
  Mtu:  Rv3623
  MtC:  MT3725
  Bha:  BH2247
  Syn:  slr0431
  Nos:  all0089
  Eco:  yggE
  EcZ:  ZyggE
  Ecs:  ECs3793
  Ype:  YPO0917
  Sty:  STM3065
  Vch:  VC0483
  Xfa:  XF1123
  Atu:  AGc3922
  Sme:  SMc01556
  Bme:  BMEI0536
  Mlo:  mlr2408
  Ccr:  CC2294
_______

[R] COG2969 Stringent starvation protein B
  Eco:  sspB
  EcZ:  ZsspB
  Ecs:  ECs4101
  Ype:  YPO3560
  Sty:  STM3341
  Vch:  VC0577
  Pae:  PA4427
  Hin:  HI1440
  Pmu:  PM0523
  Xfa:  XF0912
  Nme:  NMB1952
  NmA:  NMA0499
  Rso:  RSc2925
_______

[G] COG2971 Predicted N-acetylglucosamine kinase
  Tac:  Ta0122
  Tvo:  TVN0199
  Sso:  SSO0950 SSO3218
  Tma:  TM1280
  Dra:  DRA0191
  Cac:  CAC0183
  Nos:  alr4655
  Vch:  VC0614
  Sme:  SMc02875
  Bme:  BMEII0181 BMEII0756
  Mlo:  mll4769 mll7250
_______

[T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain
  Fnu:  FN0190
  Cac:  CAC0080 CAC1582
  Spy:  SPy0242 SPy0244 SPy1061 SPy1588 SPy1605
  Spn:  SP0155 SP0527 SP0662 SP2236
  Sau:  SA0216 SA1843
  Lin:  lin0043 lin0802 lin2119
  Bsu:  BS_yesM BS_ywpD_2
  Bha:  BH0792 BH1122 BH1547_3 BH1909 BH2013_3 BH2110 BH2727
        BH3447 BH3678 BH3841
  Vch:  VCA0851
  Pae:  PA5262
  Xfa:  XF1625
  Rso:  RSc1351
_______

[K] COG2973 Trp operon repressor
  Eco:  trpR
  EcZ:  ZtrpR
  Ecs:  ECs5351
  Ype:  YPO0453
  Sty:  STM4583
  Vch:  VC0701
  Hin:  HI0830
  Pmu:  PM0325
  Xfa:  XF1920
  Ctr:  CT169
_______

[L] COG2974 DNA recombination-dependent growth factor C
  Eco:  rdgC
  EcZ:  ZyaiD
  Ecs:  ECs0445
  Ype:  YPO3212
  Sty:  STM0392
  Vch:  VC0718
  Pae:  PA3263
  Hin:  HI0306
  Pmu:  PM0096
  Xfa:  XF0568
  Nme:  NMB0851
  NmA:  NMA1062
  Rso:  RSc0618
_______

[S] COG2975 Uncharacterized protein conserved in bacteria
  Eco:  yfhJ
  EcZ:  ZyfhJ
  Ecs:  ECs3390
  Ype:  YPO2890
  Sty:  STM2537
  Vch:  VC0754
  Pae:  PA3808
  Hin:  HI0371
  Nme:  NMB1137 NMB1175
  NmA:  NMA1347
  Rso:  RSc1026
_______

[S] COG2976 Uncharacterized protein conserved in bacteria
  Eco:  yfgM
  EcZ:  Z3776
  Ecs:  ECs3375
  Ype:  YPO2877
  Sty:  STM2521
  Buc:  BU608
  Vch:  VC0761
  Pae:  PA3801
  Hin:  HI0370
  Pmu:  PM2012
  Xfa:  XF0463
  Nme:  NMB0853
  NmA:  NMA1064
  Rso:  RSc1217
_______

[Q] COG2977 Phosphopantetheinyl transferase component of siderophore synthetase
  Cgl:  Cgl1934
  Mtu:  Rv2794c
  MtC:  MT2863
  Mle:  ML1547
  Eco:  entD
  EcZ:  ZentD
  Ecs:  ECs0622
  Ype:  YPO1580
  Sty:  STM0584
  Vch:  VC0780
  Pae:  PA1165
  Atu:  AGl205GM
  Bme:  BMEII0081
  Mlo:  mlr1970
_______

[H] COG2978 Putative p-aminobenzoyl-glutamate transporter
  Fnu:  FN0470 FN0591
  Cgl:  Cgl0101
  Sau:  SA2261
  Bha:  BH0866 BH1752
  Eco:  abgT
  EcZ:  Z2428 Z2431
  Ecs:  ECs1917 ECs1920
  Ype:  YPO1008
  Vch:  VC0863 VC0880
  Pmu:  PM1104
  Nme:  NMB1719
  NmA:  NMA1973
  Ccr:  CC0745 CC1624
_______

[S] COG2979 Uncharacterized protein conserved in bacteria
  Eco:  yebE
  EcZ:  ZyebE
  Ecs:  ECs2556
  Sty:  STM1880
  Vch:  VC0873
  Pae:  PA3712
  Pmu:  PM0946
  Nme:  NMB0286
  NmA:  NMA2201
  Atu:  AGl748
  Sme:  SMc03152
  Bme:  BMEI1092
  Mlo:  mll2991
_______

[M] COG2980 Rare lipoprotein B
  Eco:  rlpB
  EcZ:  ZrlpB
  Ecs:  ECs0679
  Ype:  YPO2609
  Sty:  STM0647
  Vch:  VC0954
  Pae:  PA3988
  Hin:  HI0922
  Pmu:  PM1215
  Xfa:  XF2177
  Nme:  NMB0707
  NmA:  NMA0912
  Rso:  RSc2743
_______

[E] COG2981 Uncharacterized protein involved in cysteine biosynthesis
  Syn:  slr1980
  Eco:  cysZ
  EcZ:  ZcysZ
  Ecs:  ECs3285
  Ype:  YPO2991
  Sty:  STM2429
  Vch:  VC0969
  Pae:  PA0846
  Hin:  HI1102
  Pmu:  PM1694
  Atu:  AGl822
  Sme:  SMc02882
  Bme:  BMEI1781
  Mlo:  mlr5338
_______

[M] COG2982 Uncharacterized protein involved in outer membrane biogenesis
  Eco:  asmA yhjG
  EcZ:  ZasmA ZyhjG
  Ecs:  ECs2871 ECs4404
  Ype:  YPO1526 YPO3987
  Sty:  STM2120 STM3610
  Vch:  VC1039
  Pae:  PA4879 PA5146
  Nme:  NMB1693
  NmA:  NMA1951
  Rso:  RSc0773
  Sme:  SMb20815 SMb20816 SMc00838
  Bme:  BMEI0415
  Mlo:  mll6538
  Rpr:  RP347
  Rco:  RC0472
_______

[S] COG2983 Uncharacterized conserved protein
  Mja:  MJ1479.1
  Eco:  ycgN
  EcZ:  ZycgN
  Ecs:  ECs1676
  Ype:  YPO2083
  Sty:  STM1811
  Vch:  VC1058
  Pae:  PA1299
  Hin:  HI1355
  Pmu:  PM0539
  Atu:  AGc1698
  Sme:  SMc00064
  Bme:  BMEI0534
  Mlo:  mll2411
  Ccr:  CC3276
_______

[R] COG2984 ABC-type uncharacterized transport system, periplasmic component
  Aae:  aq_1113
  Fnu:  FN2081
  Cgl:  Cgl2198
  Spy:  SPy1016
  Spn:  SP1069
  Vch:  VC1101
  Pae:  PA1612 PA3836
  Rso:  RSc1740
  Atu:  AGc4844
  Sme:  SMc03830
  Bme:  BMEI0015
  Mlo:  mll0624
  Rpr:  RP367
  Rco:  RC0498
  Ctr:  CT391
  Cpn:  CPn0496
_______

[R] COG2985 Predicted permease
  Hbs:  VNG7101
  Fnu:  FN1450
  Cgl:  Cgl0574 Cgl2162
  Eco:  ybjL yidE
  EcZ:  Z1074 ZyidE
  Ecs:  ECs0927 ECs4625
  Ype:  YPO1326 YPO4083
  Sty:  STM0870 STM3807
  Vch:  VC1145
  Hin:  HI0035
  Pmu:  PM1071
_______

[E] COG2986 Histidine ammonia-lyase
  Hbs:  VNG1212Gm
  Tac:  Ta0242
  Tvo:  TVN1353
  Fnu:  FN0791 FN1406
  Dra:  DRA0147
  Spy:  SPy2089
  Sau:  SA0008
  Bsu:  BS_hutH
  Bha:  BH1982
  Ype:  YPO4016
  Sty:  STM0791
  Vch:  VC1202
  Pae:  PA5093 PA5098
  Rso:  RSc2646 RSp0365
  Atu:  AGl1400GM AGl1825
  Sme:  SMa0306 SMb21165 SMc00669
  Bme:  BMEII0367 BMEII0368_2
  Mlo:  mll0151 mll7124 mlr1730 mlr8321
  Ccr:  CC0959
_______

[E] COG2987 Urocanate hydratase
  Hbs:  VNG1208G
  Tac:  Ta0239m
  Tvo:  TVN1356
  Fnu:  FN0792 FN1401
  Dra:  DRA0151
  Spy:  SPy2082
  Sau:  SA2122
  Bsu:  BS_hutU
  Bha:  BH1983
  Ype:  YPO4017
  Vch:  VC1203
  Pae:  PA5100
  Rso:  RSc2647
  Atu:  AGl1830
  Sme:  SMb21163
  Bme:  BMEII0365
  Mlo:  mlr8323
  Ccr:  CC0957
_______

[E] COG2988 Succinylglutamate desuccinylase
  Syn:  slr1705
  Nos:  alr3912
  Eco:  ydjS
  EcZ:  ZydjS
  Ecs:  ECs2450
  Ype:  YPO1966
  Sty:  STM1307
  Vch:  VC1242
  Pae:  PA0901
_______

[S] COG2989 Uncharacterized protein conserved in bacteria
  Eco:  ycbB
  EcZ:  ZycbB
  Ecs:  ECs1008
  Ype:  YPO1407
  Sty:  STM0995
  Vch:  VC1268
  Hin:  HI1667
  Pmu:  PM0270
  Atu:  AGc2155 AGc2975
  Sme:  SMc00150 SMc01769
  Bme:  BMEI1014 BMEI1193
  Mlo:  mll0533 mlr8397
  Ccr:  CC1511
_______

[S] COG2990 Uncharacterized protein conserved in bacteria
  Eco:  ybjX
  EcZ:  ZybjX
  Ecs:  ECs0963
  Ype:  YPO1363
  Sty:  STM0940 STM2781
  Vch:  VC1317
  Hin:  HI0461 HI1119
  Pmu:  PM0809 PM1512
  Nme:  NMB1357
  NmA:  NMA1569
  Cje:  Cj1069
  Mlo:  mll2190
_______

[S] COG2991 Uncharacterized protein conserved in bacteria
  Ype:  YPO3233
  Vch:  VC1322 VC2288
  Pae:  PA2992
  Hin:  HI0173
  Pmu:  PM1335
  Nme:  NMB0562
  NmA:  NMA0745
_______

[R] COG2992 Uncharacterized FlgJ-related protein
  Fnu:  FN1894
  Eco:  bax
  EcZ:  Zbax
  Ecs:  ECs4453
  Sty:  STM3663
  Vch:  VC1430
  Cje:  Cj1532
_______

[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit
  Vch:  VC1441
  Pae:  PA1553 PA1556
  Nme:  NMB1724
  NmA:  NMA1979
  Rso:  RSc1277 RSp0992
  Hpy:  HP0145
  jHp:  jhp0133
  Cje:  Cj1489c
  Atu:  AGc2832
  Sme:  SMa0615 SMa0766 SMa1216
  Bme:  BMEI1565
  Mlo:  mll6629 mlr6412
  Ccr:  CC1402
_______

[O] COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein)
  Syn:  sll0720
  Vch:  VC1450
  Nme:  NMB1210 NMB1763
  Rso:  RSp1074
  Sme:  SMc02660
_______

[S] COG2995 Uncharacterized paraquat-inducible protein A
  Eco:  pqiA yebS
  EcZ:  Z2880 ZpqiA
  Ecs:  ECs1034 ECs2543
  Ype:  YPO1420 YPO1702
  Sty:  STM1063 STM1848
  Vch:  VC1500 VC1753
  Hin:  HI1671
  Pmu:  PM0267
  Nme:  NMB1670
  NmA:  NMA1928
  Rso:  RSc0602 RSc0603
_______

[S] COG2996 Uncharacterized protein conserved in bacteria
  Fnu:  FN1042
  Cac:  CAC1635
  Lla:  L68401
  Spy:  SPy0464
  Spn:  SP0946
  Sau:  SA1223
  Lin:  lin1018
  Bsu:  BS_yitL
  Bha:  BH1329
  Vch:  VC1503
  Pae:  PA1116
_______

[H] COG2998 ABC-type tungstate transport system, permease component
  Mth:  MTH479
  Pya:  PAE0020
  Vch:  VC1523
  Rso:  RSc2093
  Cje:  Cj1540
_______

[O] COG2999 Glutaredoxin 2
  Eco:  grxB
  EcZ:  ZgrxB
  Ecs:  ECs1442
  Sty:  STM1165
  Vch:  VCA0992
  Pmu:  PM0518
  Nme:  NMB1734
  NmA:  NMA1990
_______

[I] COG3000 Sterol desaturase
  Sce:  YDR297w YGR060w YLR056w YMR272c_2
  Spo:  SPAC1687.16c SPAC19G12.08_2 SPAC630.08c SPBC887.15c
  Mtu:  Rv1814
  MtC:  MT1862
  Syn:  sll1510 slr0224
  Nos:  all2658
  Vch:  VC1534
  Pae:  PA0702 PA1897
  Rso:  RSc1254 RSc1297 RSp0730
  Atu:  AGc556
  Sme:  SMa2051 SMc02017 SMc02220
  Mlo:  mll1065 mll1880 mll6489 mlr0002 mlr0492 mlr7624
  Ccr:  CC0203 CC1444 CC1671
_______

[G] COG3001 Fructosamine-3-kinase
  Cgl:  Cgl2483
  Sau:  SA2374
  Syn:  slr1563
  Nos:  alr5126
  Eco:  yniA
  EcZ:  Z2754
  Ecs:  ECs2431
  Ype:  YPO2444
  Sty:  STM1324
  Vch:  VC1539
  Pmu:  PM0587
_______

[S] COG3002 Uncharacterized protein conserved in bacteria
  Aae:  aq_863
  Sau:  SA0412
  Bsu:  BS_ybcD
  Vch:  VC1582
_______

[P] COG3004 Na+/H+ antiporter
  Eco:  nhaA
  EcZ:  ZnhaA
  Ecs:  ECs0017
  Ype:  YPO0470
  Sty:  STM0039
  Vch:  VC1627
  Hin:  HI0225
  Pmu:  PM1684
  Hpy:  HP1552
  jHp:  jhp1447
  Cje:  Cj1654c Cj1655c
  Sme:  SMa1913
  Bme:  BMEI1535_1
  Mlo:  mlr5309
  Ccr:  CC0450
  Rco:  RC1354 RC1355
_______

[C] COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit
  Eco:  napC torC yecK
  EcZ:  ZnapC ZtorC ZyecK
  Ecs:  ECs1151 ECs2583 ECs3091
  Ype:  YPO3036
  Sty:  STM2255 STM3823
  Vch:  VC1693 VC1951 VCA0680
  Pae:  PA1172
  Hin:  HI0348 HI0644
  Pmu:  PM1598 PM1792
  Cje:  Cj0265c Cj1358c
  Atu:  AGl913
  Sme:  SMa0657 SMa0659 SMa1232
_______

[D] COG3006 Uncharacterized protein involved in chromosome partitioning
  Eco:  mukF
  EcZ:  ZmukF
  Ecs:  ECs1005
  Ype:  YPO1403
  Sty:  STM0992
  Vch:  VC1716
  Hin:  HI1372
  Pmu:  PM0607
_______

[S] COG3007 Uncharacterized paraquat-inducible protein B
  Cac:  CAC0462
  Ype:  YPO4104
  Vch:  VC1738 VC1739 VCA0784
  Pae:  PA2950
  Xfa:  XF1835
_______

[R] COG3008 Paraquat-inducible protein B
  Eco:  pqiB yebT
  EcZ:  Z2881 ZpqiB
  Ecs:  ECs1035 ECs2544
  Ype:  YPO1421 YPO1701
  Sty:  STM1064 STM1849
  Vch:  VC1501 VC1754
  Pae:  PA4689
  Hin:  HI1672
  Pmu:  PM0266
  Nme:  NMB1671
  NmA:  NMA1929
  Rso:  RSc0601 RSc2562
_______

[S] COG3009 Uncharacterized protein conserved in bacteria
  Eco:  ymbA
  EcZ:  ZymbA
  Ecs:  ECs1036
  Ype:  YPO1422
  Sty:  STM1065
  Vch:  VC1755
  Pae:  PA4963
  Nme:  NMB1672
  NmA:  NMA1930
  Rso:  RSc0600
_______

[G] COG3010 Putative N-acetylmannosamine-6-phosphate epimerase
  Fnu:  FN1476
  Cgl:  Cgl2596
  Lla:  L191486
  Spy:  SPy0251
  Spn:  SP1330 SP1685
  Sau:  SA0307
  Lin:  lin2933
  Eco:  nanE
  EcZ:  ZyhcJ
  Ecs:  ECs4096
  Ype:  YPO3023
  Sty:  STM1129 STM3337
  Vch:  VC1781
  Hin:  HI0145
  Pmu:  PM1711
  Bme:  BMEII0857_1
  Bbu:  BB0644
  Mpu:  MYPU_3630
_______

[S] COG3011 Uncharacterized protein conserved in bacteria
  Sau:  SA1942
  Bsu:  BS_yuxK
  Bha:  BH0852
  Syn:  slr0919
  Nos:  alr3172
  Ype:  YPO1564
  Vch:  VC1812
  Pae:  PA1134
  Xfa:  XF0941
  Rso:  RSc1136
  Mlo:  mll2461
  Ccr:  CC3583
_______

[S] COG3012 Uncharacterized protein conserved in bacteria
  Dra:  DR0483
  Cgl:  Cgl1403
  Eco:  ychJ
  EcZ:  ZychJ
  Ecs:  ECs1735
  Ype:  YPO2172
  Sty:  STM1755
  Vch:  VC1852
  Pae:  PA1039
  Hin:  HI0277
  Pmu:  PM1617
  Nme:  NMB1923
  Rso:  RSc0270
_______

[S] COG3013 Uncharacterized conserved protein
  Mja:  MJECS11
  Eco:  yfbU
  EcZ:  Z3555
  Ecs:  ECs3178
  Ype:  YPO2563
  Sty:  STM2335
  Vch:  VC1871
  Pmu:  PM1500
_______

[S] COG3014 Uncharacterized protein conserved in bacteria
  Vch:  VC1896
  Hpy:  HP0018
  jHp:  jhp0016
  Cje:  Cj0089
_______

[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance
  Eco:  cutF
  EcZ:  ZcutF
  Ecs:  ECs0194
  Ype:  YPO1067
  Vch:  VC1962
  Tpa:  TP0435
_______

[S] COG3016 Uncharacterized iron-regulated protein
  Aae:  aq_1477
  Vch:  VC2004
  Pae:  PA4705
  Cje:  Cj0177
_______

[M] COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis
  Eco:  hemM
  EcZ:  ZhemM
  Ecs:  ECs1714
  Ype:  YPO2015
  Sty:  STM1778
  Vch:  VC2181
  Pae:  PA4668
  Hin:  HI1607
  Pmu:  PM0246
  Xfa:  XF2646
  Nme:  NMB0873
  NmA:  NMA1091
  Rso:  RSc0397
_______

[S] COG3018 Uncharacterized protein conserved in bacteria
  Vch:  VC2206
  Hpy:  HP0836 HP0837
  jHp:  jhp0775
  Cje:  Cj1026c
_______

[R] COG3019 Predicted metal-binding protein
  Pya:  PAE2750
  Aae:  aq_1129
  Vch:  VC2216
  Pae:  PA4714
  Pmu:  PM1939
  Cje:  Cj1666c
  Sme:  SMa1008 SMb20881
_______

[S] COG3021 Uncharacterized protein conserved in bacteria
  Dra:  DR0632 DR2293
  Nos:  alr4222
  Eco:  yafD
  EcZ:  ZyafD
  Ecs:  ECs0205
  Ype:  YPO1077
  Sty:  STM0258
  Vch:  VC2238
  Pmu:  PM1075
  Atu:  AGc4075
  Bme:  BMEI1319
  Mlo:  mll7713
  Ccr:  CC1585
_______

[S] COG3022 Uncharacterized protein conserved in bacteria
  Aae:  aq_644
  Fnu:  FN1762
  Cgl:  Cgl1949
  Spy:  SPy2104
  Spn:  SP1547
  Eco:  yaaA
  EcZ:  ZyaaA
  Ecs:  ECs0006
  Ype:  YPO0462
  Sty:  STM0005
  Vch:  VC2355
  Pae:  PA3539
  Hin:  HI0984
  Pmu:  PM0066
  Nme:  NMB0895
  NmA:  NMA1114
  Rso:  RSc2009
  Cje:  Cj0984
  Ccr:  CC3385
  Rco:  RC0754
_______

[V] COG3023 Negative regulator of beta-lactamase expression
  Fnu:  FN0164
  Eco:  ampD ybjR
  EcZ:  Z1100 ZampD
  Ecs:  ECs0114 ECs0953
  Ype:  YPO1683 YPO1715 YPO3423
  Sty:  STM0146 STM0931
  Vch:  VC2421
  Pae:  PA0807 PA4522 PA5485
  Hin:  HI0300 HI1494
  Pmu:  PM0083
  Xfa:  XF2656
  Nme:  NMB0668
  NmA:  NMA0867
  Rso:  RSc1796 RSc2806
  Atu:  AGc3833
  Sme:  SMc01854
  Bme:  BMEI0565
  Mlo:  mll1570
  Ccr:  CC2567
  Rco:  RC0497 RC1358
_______

[S] COG3024 Uncharacterized protein conserved in bacteria
  Eco:  yacG
  EcZ:  ZyacG
  Ecs:  ECs0105
  Ype:  YPO3432
  Sty:  STM0138
  Vch:  VC2429
  Pae:  PA4530
  Hin:  HI0891m
  Pmu:  PM0089
  Nme:  NMB0330
  NmA:  NMA2158
  Rso:  RSc2830
  Sme:  SMc02312
  Bme:  BMEI1673
  Mlo:  msl6451
  Ccr:  CC2340
_______

[S] COG3025 Uncharacterized conserved protein
  Mac:  MA0084_1 MA2350_1
  Eco:  ygiF
  EcZ:  ZygiF
  Ecs:  ECs3937
  Ype:  YPO0652
  Sty:  STM3202
  Vch:  VC2440
  Pae:  PA5209
  Hin:  HI1598
  Pmu:  PM0251
  Rso:  RSc2886
  Mlo:  mll9114
  Ccr:  CC3522
_______

[T] COG3026 Negative regulator of sigma E activity
  Eco:  rseB
  EcZ:  ZrseB
  Ecs:  ECs3437
  Ype:  YPO2713
  Sty:  STM2638
  Vch:  VC2465
  Pae:  PA0764
  Hin:  HI0630
  Pmu:  PM1787
  Rso:  RSc1057
_______

[S] COG3027 Uncharacterized protein conserved in bacteria
  Cac:  CAC2355
  Sau:  SA0988
  Lin:  lin1192
  Bsu:  BS_yshA
  Bha:  BH3109
  Eco:  ygfE
  EcZ:  ZygfE
  Ecs:  ECs3781
  Ype:  YPO0912
  Sty:  STM3060
  Vch:  VC2478
  Pae:  PA5227
  Hin:  HI0857
  Pmu:  PM1722
  Xfa:  XF2012
  Nme:  NMB2058
  NmA:  NMA0377
  Atu:  AGl2200
  Sme:  SMc03976
  Bme:  BMEI0313
  Mlo:  mll3746
  Ccr:  CC3247
  Rpr:  RP756
  Rco:  RC1171
  Cpn:  CPn0439
_______

[S] COG3028 Uncharacterized protein conserved in bacteria
  Eco:  yjgA
  EcZ:  ZyjgA
  Ecs:  ECs5211
  Ype:  YPO3691
  Sty:  STM4437
  Vch:  VC2536
  Pae:  PA4473
  Hin:  HI1151
  Pmu:  PM0119
  Xfa:  XF1130
  Nme:  NMB0840
  NmA:  NMA1049
  Rso:  RSc0944
_______

[C] COG3029 Fumarate reductase subunit C
  Mtu:  Rv1554
  MtC:  MT1605
  Eco:  frdC
  EcZ:  ZfrdC
  Ecs:  ECs5133
  Ype:  YPO0358
  Sty:  STM4341
  Vch:  VC2658
  Hin:  HI0833
  Pmu:  PM0199
_______

[R] COG3030 Protein affecting phage T7 exclusion by the F plasmid
  Hbs:  VNG1906H
  Mac:  MA3261
  Cgl:  Cgl1446
  Mtu:  Rv2053c
  Lin:  lin1604
  Bsu:  BS_ytzA
  Bha:  BH3162
  Eco:  fxsA yjeG
  EcZ:  Z5745
  Ecs:  ECs5121
  Ype:  YPO0349
  Sty:  STM4327
  Vch:  VC2696
  Pae:  PA4387
  Pmu:  PM1105
  Nme:  NMB0730
  NmA:  NMA0940
  Atu:  AGc11
  Sme:  SMc02787
  Bme:  BMEI2054
  Mlo:  mll4543
_______

[U] COG3031 Type II secretory pathway, component PulC
  Aae:  aq_1473
  Eco:  gspC yghF
  Vch:  VC2734
_______

[E] COG3033 Tryptophanase
  Hbs:  VNG2373G
  Ape:  APE1275
  Fnu:  FN1943 FN1988
  Eco:  tnaA
  EcZ:  ZtnaA
  Ecs:  ECs4645
  Vch:  VCA0161
  Pmu:  PM0811 PM1420
_______

[S] COG3034 Uncharacterized protein conserved in bacteria
  Aae:  aq_183
  Eco:  yafK
  EcZ:  ZyafK
  Ecs:  ECs0251
  Ype:  YPO3241
  Sty:  STM0312 STM3277
  Vch:  VCA0164
  Pae:  PA3756
  Hpy:  HP0518
  jHp:  jhp0467
  Cje:  Cj0906c
  Atu:  AGl2392 AGl2977
  Sme:  SMc00689
  Bme:  BMEI0038
  Mlo:  mlr3577 mlr7497
_______

[S] COG3036 Uncharacterized protein conserved in bacteria
  Eco:  yhdL
  Ype:  YPO0237
  Sty:  STM3411
  Vch:  VCA0185
  Pae:  PA3990
  Hin:  HI0235
  Pmu:  PM1129
  Nme:  NMB1382
_______

[S] COG3037 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2977
  Spy:  SPy0174 SPy1949
  Spn:  SP2038 SP2129
  Sau:  SA0318
  Lin:  lin2798
  Bha:  BH0223
  Eco:  sgaT
  EcZ:  Z1087 ZsgaT
  Ecs:  ECs0940 ECs5169
  Ype:  YPO2782
  Sty:  STM0884 STM2342 STM4383
  Vch:  VCA0246_1
  Pmu:  PM0764_1
  Mpu:  MYPU_1980_1 MYPU_5940
  Mpn:  MPN496
_______

[C] COG3038 Cytochrome B561
  Syn:  slr1449
  Eco:  cybB yceJ yodB
  EcZ:  Z1693 ZcybB ZyodB
  Ecs:  ECs1435 ECs2023 ECs2712
  Ype:  YPO2316 YPO2974 YPO3321
  Sty:  STM1158 STM1253 STM1639
  Vch:  VCA0249 VCA0538
  Pae:  PA0422 PA0918 PA2936 PA3575
  Pmu:  PM1318
  Xfa:  XF1328
  NmA:  NMA0343
  Rso:  RSc0199 RSc2719
  Atu:  AGc2735 AGc4771
  Sme:  SMc01022
  Bme:  BMEII1041 BMEII1073
  Mlo:  mll5049 mlr3584 mlr4647
  Ccr:  CC3391_1
  Rco:  RC0602
_______

[L] COG3039 Transposase and inactivated derivatives, IS5 family
  Hbs:  VNG0035H VNG6040H VNG6486H VNG7034 VNG7175
  Mac:  MA2701 MA3798
  Tac:  Ta0379
  Tvo:  TVN1409 TVN1410
  Mtu:  Rv1034c Rv1035c Rv1036c Rv2961 Rv3386 Rv3387
  MtC:  MT1063 MT1065 MT3494 MT3494.1
  Eco:  yghP yi52_g10 yi52_g11 yi52_g2 yi52_g3 yi52_g4 yi52_g5
        yi52_g6 yi52_g7 yi52_g8a yi52_g9
  Vch:  VCA0282 VCA0472
  Nme:  NMB0141 NMB0919 NMB0991 NMB1054 NMB1399 NMB1539 NMB1553
        NMB1601 NMB1922
  NmA:  NMA0221 NMA0458 NMA0461 NMA0734 NMA1115 NMA1199 NMA1217
        NMA1253 NMA1618 NMA1619 NMA1641 NMA1738 NMA1741 NMA1775
        NMA1776
  Rso:  RSc0843 RSc1671 RSc1704 RSc3123 RSc3145 RSc3421 RSp0042
        RSp0093 RSp0155 RSp0206 RSp0301 RSp0582 RSp0584 RSp0991
        RSp1136 RSp1179
  Atu:  AGl863gl
  Sme:  SMa0475 SMa0476 SMa0591 SMa1636 SMa1637 SMb20665 SMc02430
        SMc03260 SMc04038 SMc04039
  Mlo:  mll6220 mll6225
_______

[M] COG3040 Bacterial lipocalin
  Cgl:  Cgl0611
  Eco:  blc
  EcZ:  Zblc
  Ecs:  ECs5130
  Sty:  STM4339
  Vch:  VCA0317 VCA0350 VCA0406 VCA0443
  Pae:  PA5107
  Cje:  Cj1547
  Atu:  AGl93
  Mlo:  mlr4717 mlr5751
  Ccr:  CC2917 CC3478
_______

[S] COG3041 Uncharacterized protein conserved in bacteria
  Spn:  SP0276
  Nos:  asr4471
  Eco:  yafQ
  EcZ:  Z0284
  Ecs:  ECs0252
  Sty:  STM3516
  Vch:  VCA0323
  Hin:  HI0711
  Xfa:  XF2080
  Hpy:  HP0892 HP0894
  jHp:  jhp0825 jhp0831
  Atu:  AGc1701
_______

[R] COG3042 Putative hemolysin
  Afu:  AF1947
  Eco:  yoaF
  EcZ:  ZyoaF
  Ecs:  ECs2502
  Ype:  YPO2331
  Sty:  STM1275 STM1649
  Vch:  VCA0594
  Nme:  NMB0772
  NmA:  NMA0983
  Rso:  RSp1194
  Mlo:  msl2463
_______

[C] COG3043 Nitrate reductase cytochrome c-type subunit
  Eco:  napB
  EcZ:  ZnapB
  Ecs:  ECs3092
  Ype:  YPO3037
  Sty:  STM2256
  Vch:  VCA0679
  Pae:  PA1173
  Hin:  HI0347
  Pmu:  PM1597
  Cje:  Cj0783
  Atu:  AGl915
  Sme:  SMa1233
_______

[R] COG3044 Predicted ATPase of the ABC class
  Mja:  MJ1628
  Mka:  MK0347
  Ape:  APE1810
  Vch:  VCA0786
_______

[S] COG3045 Uncharacterized protein conserved in bacteria
  Eco:  creA
  EcZ:  ZcreA
  Ecs:  ECs5355
  Ype:  YPO0457
  Sty:  STM4587
  Vch:  VCA0800
  Pae:  PA4564
  Nme:  NMB1335
  NmA:  NMA1549
  Rso:  RSc1471
  Atu:  AGc3762
  Sme:  SMc01465
  Bme:  BMEI0595
  Mlo:  mll1531
_______

[R] COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase
  Hbs:  VNG0705C
  Mth:  MTH1776
  Syn:  slr1343
  Vch:  VCA0809
  Atu:  AGl236
  Ccr:  CC0646
_______

[M] COG3047 Outer membrane protein W
  Eco:  ompW
  EcZ:  Z2557 ZyciD
  Ecs:  ECs1756
  Ype:  YPO2201
  Sty:  STM1732
  Vch:  VCA0867
  Pae:  PA4067
  Pmu:  PM0331
  Xfa:  XF0872
  Rso:  RSc2967 RSc3350
  Atu:  AGl3239
  Bme:  BMEI0454
  Mlo:  mll6127
  Ccr:  CC1287 CC1409
  Rpr:  RP075
  Rco:  RC0105
_______

[E] COG3048 D-serine dehydratase
  Fnu:  FN0553
  Bsu:  BS_yqjR
  Bha:  BH1762
  Eco:  dsdA
  EcZ:  ZdsdA
  Ecs:  ECs3245
  Sty:  STM3802
  Vch:  VCA0875
  Pae:  PA3357
_______

[M] COG3049 Penicillin V acylase and related amidases
  Mac:  MA0755
  Lla:  L149164 L86424
  Sau:  SA0264
  Bsu:  BS_yxeI
  Syn:  slr1772
  Sty:  STM1540
  Vch:  VCA0877
  Atu:  AGl573
  Bme:  BMEI0543
  Mlo:  mlr8141
_______

[L] COG3050 DNA polymerase III, psi subunit
  Eco:  holD
  EcZ:  ZholD
  Ecs:  ECs5330
  Ype:  YPO0428
  Sty:  STM4557
  Vch:  VC0656
  Hin:  HI0011
  Pmu:  PM0959
_______

[C] COG3051 Citrate lyase, alpha subunit
  Fnu:  FN1380
  Lla:  L0041
  Spy:  SPy1189
  Eco:  citF
  EcZ:  ZcitF
  Ecs:  ECs0654
  Sty:  STM0061 STM0621
  Vch:  VC0799
  Hin:  HI0022
_______

[C] COG3052 Citrate lyase, gamma subunit
  Fnu:  FN1378
  Lla:  L0039
  Spy:  SPy1186
  Eco:  citD
  EcZ:  ZcitD
  Ecs:  ECs0656
  Sty:  STM0059 STM0623
  Vch:  VC0797
  Hin:  HI0024
_______

[C] COG3053 Citrate lyase synthetase
  Fnu:  FN0319
  Lla:  L0038
  Spy:  SPy1192
  Eco:  citC
  EcZ:  ZcitC
  Ecs:  ECs0657
  Sty:  STM0058 STM0624
  Vch:  VC0796
  Hin:  HI0025
_______

[R] COG3054 Predicted transcriptional regulator
  Eco:  ytfJ
  EcZ:  ZytfJ
  Ecs:  ECs5194
  Ype:  YPO3528
  Sty:  STM4405
  Vch:  VC2550
  Hin:  HI0045
  Pmu:  PM0159
_______

[S] COG3055 Uncharacterized protein conserved in bacteria
  Fnu:  FN1470
  Eco:  yjhT
  EcZ:  Z5893 ZyjhT
  Ecs:  ECs5255 ECs5269
  Ype:  YPO1858
  Sty:  STM1130
  Vch:  VC1773 VC1774
  Hin:  HI0148
  Pmu:  PM1707
  Bme:  BMEII0856
_______

[M] COG3056 Uncharacterized lipoprotein
  Eco:  yajG
  EcZ:  ZyajG
  Ecs:  ECs0488
  Ype:  YPO3161
  Sty:  STM0445
  Vch:  VC2298
  Hin:  HI0162
  Pmu:  PM1323
_______

[L] COG3057 Negative regulator of replication initiationR
  Eco:  seqA
  EcZ:  ZseqA
  Ecs:  ECs0718
  Ype:  YPO2685
  Sty:  STM0697
  Vch:  VC2096
  Hin:  HI0192
  Pmu:  PM0356
_______

[O] COG3058 Uncharacterized protein involved in formate dehydrogenase formation
  Aae:  aq_1051
  Eco:  fdhE
  EcZ:  ZfdhE
  Ecs:  ECs4817
  Ype:  YPO4055
  Sty:  STM4034
  Pae:  PA4809
  Hin:  HI0009
  Pmu:  PM0405
  Sme:  SMa0009
_______

[S] COG3059 Predicted membrane protein
  Eco:  ykgB
  EcZ:  ZykgB
  Ecs:  ECs0340
  Sty:  STM0566
  Vch:  VC1587
  Hin:  HI0219
  Pmu:  PM1931
  Hpy:  HP0565
  jHp:  jhp0512
_______

[KE] COG3060 Transcriptional regulator of met regulon
  Eco:  metJ
  EcZ:  ZmetJ
  Ecs:  ECs4867
  Ype:  YPO0114
  Sty:  STM4099
  Vch:  VC2682
  Hin:  HI0294
  Pmu:  PM1290
_______

[M] COG3061 Cell envelope opacity-associated protein A
  Eco:  ytfB
  EcZ:  ZytfB
  Ecs:  ECs5184
  Ype:  YPO3533
  Sty:  STM4396
  Vch:  VC2567
  Hin:  HI0330
  Pmu:  PM0098
_______

[P] COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase
  Eco:  napD
  EcZ:  ZnapD
  Ecs:  ECs3096
  Ype:  YPO3039
  Sty:  STM2260
  Vch:  VCA0677
  Pae:  PA1175
  Hin:  HI0343
  Pmu:  PM1593
  Cje:  Cj0785
  Atu:  AGl919
  Sme:  SMa1239
_______

[NU] COG3063 Tfp pilus assembly protein PilF
  Ype:  YPO2881
  Vch:  VC1612
  Pae:  PA3805
  Hin:  HI0366
  Pmu:  PM2008
  Xfa:  XF0460
  Nme:  NMB1309
  NmA:  NMA1523
  Rso:  RSc1213
_______

[M] COG3064 Membrane protein involved in colicin uptake
  Eco:  tolA
  EcZ:  ZtolA
  Ecs:  ECs0774
  Ype:  YPO1123
  Sty:  STM0747
  Vch:  VC1837
  Hin:  HI0383
  Pmu:  PM0968
_______

[M] COG3065 Starvation-inducible outer membrane lipoprotein
  Eco:  slp yeaY
  EcZ:  Z2849 Zslp
  Ecs:  ECs2515 ECs4377
  Ype:  YPO2073
  Sty:  STM1819
  Vch:  VC1987
  Hin:  HI0389
  Pmu:  PM0708
  Xfa:  XF1811
_______

[L] COG3066 DNA mismatch repair protein
  Eco:  mutH
  EcZ:  ZmutH
  Ecs:  ECs3688
  Ype:  YPO0789
  Sty:  STM3005
  Vch:  VC0668
  Hin:  HI0403
  Pmu:  PM1067
_______

[P] COG3067 Na+/H+ antiporter
  Eco:  nhaB
  EcZ:  ZnhaB
  Ecs:  ECs1681
  Ype:  YPO2142
  Sty:  STM1806
  Vch:  VC1901
  Pae:  PA1820
  Hin:  HI0427
  Pmu:  PM0047
_______

[S] COG3068 Uncharacterized protein conserved in bacteria
  Eco:  yjaG
  EcZ:  ZyjaG
  Ecs:  ECs4922
  Ype:  YPO3732
  Sty:  STM4169
  Vch:  VC0268
  Hin:  HI0431
  Pmu:  PM1733
_______

[C] COG3069 C4-dicarboxylate transporter
  Eco:  dcuC dcuD
  EcZ:  Z4585 ZdcuC
  Ecs:  ECs0660 ECs4100
  Sty:  STM0627
  Vch:  VCA0665
  Hin:  HI0585 HI0586
  Pmu:  PM0230 PM0933 PM1299
_______

[K] COG3070 Regulator of competence-specific genes
  Cac:  CAC2476
  Spn:  SP0951
  Sau:  SA0087
  Lin:  lin2889
  Eco:  yccR
  EcZ:  Z1309
  Ecs:  ECs1043
  Ype:  YPO1437
  Sty:  STM1072
  Vch:  VC1153 VC1722
  Pae:  PA4703
  Hin:  HI0601
  Pmu:  PM1558
  Nme:  NMB0933_1
  Rso:  RSc0090
  Sme:  SMc00520
  Mlo:  mlr0026
  Ccr:  CC0401
  Rco:  RC0963
_______

[H] COG3071 Uncharacterized enzyme of heme biosynthesis
  Eco:  hemY
  EcZ:  ZhemY
  Ecs:  ECs4732
  Ype:  YPO3852
  Sty:  STM3935
  Vch:  VC0117
  Pae:  PA5257
  Hin:  HI0602
  Pmu:  PM1815
  Xfa:  XF1797
  Nme:  NMB0779
  NmA:  NMA0990
  Rso:  RSc2355
_______

[F] COG3072 Adenylate cyclase
  Eco:  cyaA
  EcZ:  ZcyaA
  Ecs:  ECs4736
  Ype:  YPO3848
  Sty:  STM3939
  Vch:  VC0122
  Pae:  PA5272
  Hin:  HI0604
  Pmu:  PM1811
_______

[T] COG3073 Negative regulator of sigma E activity
  Eco:  rseA
  EcZ:  ZrseA
  Ecs:  ECs3438
  Ype:  YPO2712
  Sty:  STM2639
  Vch:  VC2466
  Pae:  PA0763
  Hin:  HI0629
  Pmu:  PM1788
  Xfa:  XF2240
  Rso:  RSc1056
_______

[S] COG3074 Uncharacterized protein conserved in bacteria
  Eco:  yiiU
  EcZ:  ZyiiU
  Ecs:  ECs4853
  Ype:  YPO0093
  Sty:  STM4088
  Vch:  VC2686
  Hin:  HI0668
  Pmu:  PM1483
_______

[E] COG3075 Anaerobic glycerol-3-phosphate dehydrogenase
  Hbs:  VNG1971G
  Eco:  glpB
  EcZ:  ZglpB
  Ecs:  ECs3127
  Ype:  YPO3825
  Sty:  STM2285
  Vch:  VCA0748
  Hin:  HI0684
  Pmu:  PM1441
_______

[S] COG3076 Uncharacterized protein conserved in bacteria
  Eco:  yjgD
  EcZ:  ZyjgD
  Ecs:  ECs5232
  Ype:  YPO3445
  Sty:  STM4470
  Vch:  VC0424
  Hin:  HI0700
  Pmu:  PM1565
_______

[L] COG3077 DNA-damage-inducible protein J
  Fnu:  FN0773
  Spy:  SPy0550
  Spn:  SP0275
  Eco:  dinJ relB
  EcZ:  ZdinJ
  Ecs:  ECs0253
  Ype:  YPO3628
  Sty:  STM3517 STM4449
  Vch:  VCA0324
  Hin:  HI0710
  Xfa:  XF2081
  Atu:  AGc1704
  Sme:  SMa0471
  Rco:  RC1344
_______

[S] COG3078 Uncharacterized protein conserved in bacteria
  Eco:  yihI
  EcZ:  ZyihI
  Ecs:  ECs4788
  Ype:  YPO0020
  Sty:  STM4003
  Vch:  VC0114
  Hin:  HI0724
  Pmu:  PM1835
_______

[S] COG3079 Uncharacterized protein conserved in bacteria
  Eco:  ygfB
  EcZ:  ZygfB
  Ecs:  ECs3780
  Ype:  YPO0911
  Sty:  STM3059
  Vch:  VC2476
  Pae:  PA5225
  Hin:  HI0817
  Pmu:  PM1723
  Xfa:  XF2010
_______

[C] COG3080 Fumarate reductase subunit D
  Mtu:  Rv1555
  MtC:  MT1606
  Eco:  frdD
  EcZ:  ZfrdD
  Ecs:  ECs5132
  Ype:  YPO0357
  Sty:  STM4340
  Vch:  VC2659
  Hin:  HI0832
  Pmu:  PM0198
_______

[R] COG3081 Nucleoid-associated protein
  Eco:  yejK
  EcZ:  ZyejK
  Ecs:  ECs3078
  Ype:  YPO1262
  Sty:  STM2226
  Vch:  VC2039
  Pae:  PA3849
  Hin:  HI0839
  Pmu:  PM1885
_______

[S] COG3082 Uncharacterized protein conserved in bacteria
  Eco:  yejL
  EcZ:  ZyejL
  Ecs:  ECs3079
  Ype:  YPO1261
  Sty:  STM2227
  Vch:  VC2040
  Hin:  HI0840
  Pmu:  PM1884
_______

[R] COG3083 Predicted hydrolase of alkaline phosphatase superfamily
  Eco:  yejM
  EcZ:  ZyejM
  Ecs:  ECs3080
  Ype:  YPO1260
  Sty:  STM2228
  Vch:  VC2041 VC2600
  Pae:  PA0924
  Hin:  HI0841
  Pmu:  PM1883
_______

[S] COG3084 Uncharacterized protein conserved in bacteria
  Eco:  yihD
  EcZ:  ZyihD
  Ecs:  ECs4781
  Ype:  YPO0013a
  Sty:  STM3995
  Vch:  VC0037
  Hin:  HI0845
  Pmu:  PM1800
_______

[S] COG3085 Uncharacterized protein conserved in bacteria
  Eco:  yifE
  EcZ:  ZyifE
  Ecs:  ECs4699
  Ype:  YPO3903
  Sty:  STM3898
  Vch:  VCA1021
  Hin:  HI0847
  Pmu:  PM1802
_______

[T] COG3086 Positive regulator of sigma E activity
  Tma:  TM1356
  Fnu:  FN0338
  Eco:  rseC
  EcZ:  ZrseC
  Ecs:  ECs3436
  Ype:  YPO2714
  Sty:  STM2637
  Vch:  VC2464
  Pae:  PA0765
  Hin:  HI0589 HI0850
  Pmu:  PM1786
_______

[D] COG3087 Cell division protein
  Eco:  ftsN
  EcZ:  ZftsN
  Ecs:  ECs4860
  Ype:  YPO0107
  Sty:  STM4093
  Vch:  VC2676
  Pae:  PA5052
  Hin:  HI0896
  Pmu:  PM1136
  Xfa:  XF0146
  Nme:  NMB0406
  NmA:  NMA2079
  Rso:  RSc0286
_______

[O] COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes
  Dra:  DR0344
  Eco:  ccmH_1 nrfF
  EcZ:  ZccmH_1 ZnrfF
  Ecs:  ECs3083_1 ECs5057
  Ype:  YPO2741
  Sty:  STM2247_1 STM3812_1 STM4281_2
  Pae:  PA1482
  Hin:  HI0934_1 HI1096m
  Pmu:  PM0012 PM0029
  Xfa:  XF2462
  Atu:  AGc1789
  Sme:  SMc02364
  Bme:  BMEI1331
  Mlo:  mlr7691
  Ccr:  CC2759
_______

[S] COG3089 Uncharacterized protein conserved in bacteria
  Eco:  yheU
  EcZ:  ZyheU
  Ecs:  ECs4205
  Ype:  YPO0179
  Sty:  STM3463
  Vch:  VC2612
  Pae:  PA3463
  Hin:  HI0956
  Pmu:  PM1156
_______

[G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component
  Fnu:  FN1257 FN1473_1
  Cgl:  Cgl2288
  Bha:  BH0702 BH2672 BH3392
  Eco:  yiaM
  Ype:  YPO1578
  Sty:  STM3170 STM3671 STM4053
  Vch:  VC1778 VC1928
  Pae:  PA0885 PA3780 PA5168
  Hin:  HI0051 HI0147_1 HI1030
  Pmu:  PM0274 PM1254 PM1643 PM1652 PM1708_1
  Atu:  AGc4972 AGl113_1 AGl3113_1 AGl3124 AGl3307 AGl3346
  Sme:  SMa0155 SMa0249 SMb20034 SMb20296 SMb20322 SMb20373 SMb20443
        SMb20980 SMb21352 SMb21437 SMc00266_1 SMc00272
  Ccr:  CC1447
_______

[S] COG3091 Uncharacterized protein conserved in bacteria
  Lla:  L86677
  Spy:  SPy0581
  Spn:  SP0909
  Sau:  SA1867
  Lin:  lin0898
  Bsu:  BS_ydcK
  Bha:  BH0532
  Eco:  sprT
  EcZ:  ZsprT
  Ecs:  ECs3820
  Ype:  YPO0932
  Sty:  STM3092
  Vch:  VC0471
  Pae:  PA1189
  Hin:  HI1173
  Pmu:  PM1026
_______

[S] COG3092 Uncharacterized protein conserved in bacteria
  Eco:  yfbV
  EcZ:  Z3556
  Ecs:  ECs3179
  Ype:  YPO2564
  Sty:  STM2336
  Vch:  VC1099
  Hin:  HI1205
  Pmu:  PM0703
_______

[R] COG3093 Plasmid maintenance system antidote protein
  Fnu:  FN1665
  Cgl:  Cgl1005 Cgl1465 Cgl2962
  Nos:  asl2923
  Eco:  ybaQ yddM
  EcZ:  ZybaQ ZyddM
  Ecs:  ECs0536 ECs2081
  Vch:  VCA0392
  Pae:  PA4674
  Hin:  HI1251
  Xfa:  XF0720 XF1708
  Sme:  SMc02151 SMc02394 SMc02477
  Mlo:  mlr1577
  Ccr:  CC2867
_______

[S] COG3094 Uncharacterized protein conserved in bacteria
  Eco:  ychQ
  EcZ:  Z1984
  Ecs:  ECs1718
  Ype:  YPO2019
  Sty:  STM1774
  Vch:  VC2177
  Hin:  HI1253
  Pmu:  PM0842
  Nme:  NMB0746
  NmA:  NMA0959
_______

[D] COG3095 Uncharacterized protein involved in chromosome partitioning
  Eco:  mukE
  EcZ:  ZmukE
  Ecs:  ECs1006
  Ype:  YPO1404
  Sty:  STM0993
  Vch:  VC1715
  Hin:  HI1373
  Pmu:  PM0608
_______

[D] COG3096 Uncharacterized protein involved in chromosome partitioning
  Eco:  mukB
  EcZ:  ZmukB
  Ecs:  ECs1007
  Ype:  YPO1405
  Sty:  STM0994
  Vch:  VC1714
  Hin:  HI1374
  Pmu:  PM0609
_______

[S] COG3097 Uncharacterized protein conserved in bacteria
  Eco:  yqfB
  EcZ:  ZyqfB
  Ecs:  ECs3772
  Ype:  YPO1778
  Sty:  STM3050
  Vch:  VC1576
  Hin:  HI1394
  Pmu:  PM1447
_______

[S] COG3098 Uncharacterized protein conserved in bacteria
  Eco:  yqcC
  EcZ:  Z4108
  Ecs:  ECs3652
  Ype:  YPO1037
  Sty:  STM2965
  Vch:  VC0887
  Pae:  PA4698
  Hin:  HI1436
  Pmu:  PM0478
_______

[S] COG3099 Uncharacterized protein conserved in bacteria
  Eco:  yciU
  EcZ:  Z2024
  Ecs:  ECs1748
  Ype:  YPO2187
  Sty:  STM1740
  Vch:  VC1208
  Hin:  HI1450
  Pmu:  PM0536
_______

[S] COG3100 Uncharacterized protein conserved in bacteria
  Eco:  ycgL
  EcZ:  ZycgL
  Ecs:  ECs1674
  Ype:  YPO2080
  Sty:  STM1813
  Vch:  VC1957
  Pae:  PA1295
  Hin:  HI1446
  Pmu:  PM0444
_______

[S] COG3101 Uncharacterized protein conserved in bacteria
  Eco:  yfcM
  EcZ:  Z3589
  Ecs:  ECs3210
  Ype:  YPO2754
  Sty:  STM2381
  Vch:  VC2113
  Hin:  HI1563
  Pmu:  PM0469
_______

[S] COG3102 Uncharacterized protein conserved in bacteria
  Eco:  yecM
  EcZ:  ZyecM
  Ecs:  ECs2585
  Ype:  YPO2047
  Sty:  STM1908
  Vch:  VC2073
  Hin:  HI1581 HI1582
  Pmu:  PM0552
_______

[T] COG3103 SH3 domain protein
  Lin:  lin0018_1 lin0412_1 lin0591_2 lin1556_1 lin2100_2
  Bsu:  BS_yrvJ_1
  Eco:  ygiM
  EcZ:  ZygiM
  Ecs:  ECs3938
  Ype:  YPO0651
  Sty:  STM3203
  Vch:  VC2443
  Pae:  PA4154
  Hin:  HI1605
  Pmu:  PM0248
_______

[E] COG3104 Dipeptide/tripeptide permease
  Sce:  YKR093w
  Spo:  SPBC13A2.04c
  Ecu:  ECU11g1050
  Cac:  CAC0751
  Cgl:  Cgl2552 Cgl2994
  Lla:  L104437
  Sau:  SA0682
  Lin:  lin0564
  Bsu:  BS_yclF
  Eco:  ybgH ydgR yhiP yjdL
  EcZ:  ZybgH ZydgR ZyhiP ZyjdL
  Ecs:  ECs0734 ECs2343 ECs4368 ECs5112
  Ype:  YPO2361
  Sty:  STM0710 STM1452 STM2560 STM3592
  Vch:  VC0988
  Xfa:  XF1891
  Nme:  NMB2136
  NmA:  NMA0222
  Ccr:  CC3413
_______

[S] COG3105 Uncharacterized protein conserved in bacteria
  Eco:  yhcB
  EcZ:  ZyhcB
  Ecs:  ECs4106
  Ype:  YPO3565
  Sty:  STM3347
  Vch:  VC0567
  Pae:  PA4441
  Hin:  HI1628
  Pmu:  PM0688
_______

[R] COG3106 Predicted ATPase
  Eco:  ycjX
  EcZ:  ZycjX
  Ecs:  ECs1900
  Ype:  YPO2348
  Sty:  STM1685
  Vch:  VC1306
  Hin:  HI1637
  Pmu:  PM0910
  Atu:  AGc2507
  Sme:  SMc00467
  Bme:  BMEI0951
  Mlo:  mlr0775
_______

[R] COG3107 Putative lipoprotein
  Eco:  yraM
  EcZ:  ZyraM
  Ecs:  ECs4028
  Ype:  YPO3548
  Sty:  STM3264
  Vch:  VC0581
  Pae:  PA4423
  Hin:  HI1655
  Pmu:  PM0646
  Xfa:  XF0553
_______

[S] COG3108 Uncharacterized protein conserved in bacteria
  Eco:  ycbK
  EcZ:  ZycbK
  Ecs:  ECs1009
  Ype:  YPO1408
  Sty:  STM0996
  Vch:  VC1269
  Hin:  HI1665 HI1666
  Pmu:  PM0271
  Atu:  AGc3311 AGl2143_1
  Sme:  SMc00291 SMc04010_1
  Bme:  BMEI0722 BMEII0010_1
  Mlo:  mll2999_1 mlr0938 mlr6494_1
  Ccr:  CC1512
_______

[T] COG3109 Activator of osmoprotectant transporter ProP
  Eco:  proQm
  EcZ:  ZproQm
  Ecs:  ECs2541
  Ype:  YPO1704
  Sty:  STM1846
  Vch:  VC1497
  Pae:  PA2582
  Hin:  HI1669 HI1670
  Pmu:  PM0268
_______

[S] COG3110 Uncharacterized protein conserved in bacteria
  Eco:  yccT
  EcZ:  Z1315
  Ecs:  ECs1048
  Ype:  YPO1442
  Sty:  STM1077
  Vch:  VC1853 VCA0026
  Hin:  HI1681
  Pmu:  PM0395
_______

[S] COG3111 Uncharacterized conserved protein
  Eco:  ydeI ygiW
  EcZ:  Z1498 Z2099 ZydeI ZygiW
  Ecs:  ECs1244 ECs2145 ECs2197 ECs3906
  Ype:  YPO3027
  Sty:  PSLT020 STM1515 STM3176
  Vch:  VCA0732
  Pae:  PA0320
  Hin:  HI1709
  Pmu:  PM1171
_______

[S] COG3112 Uncharacterized protein conserved in bacteria
  Eco:  yacL
  EcZ:  ZyacL
  Ecs:  ECs0123
  Ype:  YPO3414
  Sty:  STM0160
  Vch:  VC0605
  Hin:  HI1724
  Pmu:  PM0457
_______

[R] COG3113 Predicted NTP binding protein (contains STAS domain)
  Eco:  yrbB
  EcZ:  ZyrbB
  Ecs:  ECs4070
  Ype:  YPO3571
  Sty:  STM3309
  Vch:  VC2516
  Hin:  HI1083
  Pmu:  PM0178
  Xfa:  XF0417
  Nme:  NMB1962
  NmA:  NMA0489
  Rso:  RSc2957
_______

[U] COG3114 Heme exporter protein D
  Eco:  ccmD
  EcZ:  ZccmD
  Ecs:  ECs3087
  Ype:  YPO2737
  Sty:  STM2251 STM3816
  Vch:  VC2054
  Pae:  PA1478
  Hin:  HI1092
  Pmu:  PM0008
_______

[D] COG3115 Cell division protein
  Eco:  zipA
  EcZ:  ZzipA
  Ecs:  ECs3284
  Ype:  YPO2990
  Sty:  STM2428
  Vch:  VC0970
  Pae:  PA1528
  Hin:  HI1101
  Pmu:  PM1695
  Xfa:  XF2557
_______

[D] COG3116 Cell division protein
  Eco:  ftsL
  EcZ:  ZftsL
  Ecs:  ECs0087
  Ype:  YPO0548
  Sty:  STM0121
  Buc:  BU223m
  Vch:  VC2408
  Pae:  PA4419
  Hin:  HI1131
  Pmu:  PM0135
  Xfa:  XF0791
  Rso:  RSc2851
_______

[S] COG3117 Uncharacterized protein conserved in bacteria
  Eco:  yrbK
  EcZ:  ZyrbK
  Ecs:  ECs4078
  Ype:  YPO3579
  Sty:  STM3317
  Vch:  VC2525
  Pae:  PA4459
  Hin:  HI1150
  Pmu:  PM0173
  Xfa:  XF1411
  Nme:  NMB0354 NMB0412
  NmA:  NMA2073 NMA2133
  Rso:  RSc0411
_______

[O] COG3118 Thioredoxin domain-containing protein
  Cgl:  Cgl0670 Cgl1191
  Mtu:  Rv1324
  MtC:  MT1366
  Mle:  ML1159
  Eco:  ybbN
  EcZ:  ZybbN
  Ecs:  ECs0555
  Ype:  YPO3082
  Sty:  STM0504
  Vch:  VC0977
  Pae:  PA4061
  Hin:  HI1159m
  Pmu:  PM0574
  Xfa:  XF2174
  Rso:  RSc0779
  Atu:  AGl2276
  Sme:  SMc03801
  Bme:  BMEII0401
  Mlo:  mll4432
  Ccr:  CC0110
_______

[P] COG3119 Arylsulfatase A and related enzymes
  Hbs:  VNG0061C VNG1057C VNG1337C
  Mac:  MA2645 MA2648 MA2650
  Pab:  PAB0793
  Spo:  SPBPB10D8.02c
  Mtu:  Rv0296c Rv0663 Rv0711 Rv3077 Rv3299c
  MtC:  MT0310 MT0692 MT0738 MT3162 MT3398
  Eco:  aslA ydeN yidJ
  EcZ:  Z1089 Z2210 ZaslA ZyidJ
  Ecs:  ECs0942 ECs2103 ECs4619 ECs4731
  Ype:  YPO0829 YPO0842 YPO3047
  Sty:  STM0035 STM0084 STM0886 STM3122
  Pae:  PA0031 PA0183 PA2333
  Hin:  HI1316
  Pmu:  PM0598 PM1682
  Atu:  AGl469
  Sme:  SMa0943 SMa1683 SMb20332 SMb20915 SMc00127 SMc00954
  Bme:  BMEII0110
  Mlo:  mll5471 mll7612 mlr3684
  Ccr:  CC1172
_______

[S] COG3120 Uncharacterized protein conserved in bacteria
  Eco:  ycbG
  EcZ:  ZycbG
  Ecs:  ECs1040
  Ype:  YPO1433
  Sty:  STM1069
  Vch:  VC1481
  Hin:  HI1323
  Pmu:  PM0482
_______

[NU] COG3121 P pilus assembly protein, chaperone PapD
  Dra:  DRB0062
  Syn:  slr1668
  Eco:  ecpD fimC sfmC ybgP ycbF ycbR yehC
        yfcS yhcA yqiH yraI
  EcZ:  Z0023 Z1534 Z1537 Z2201 Z4969 Z5223 Z5224
        ZecpD ZfimC ZsfmC ZybgP ZycbFm ZycbR ZyehC
        ZyfcS ZyraI
  Ecs:  ECs0023 ECs0144 ECs0593 ECs0742 ECs1022 ECs1028 ECs1276
        ECs1279 ECs2112 ECs2916 ECs3220 ECs4021 ECs4430 ECs4668
        ECs4669 ECs5275
  Ype:  YPMT1.82 YPO0303 YPO0699 YPO1304 YPO1697 YPO1708 YPO1711
        YPO1918 YPO1921 YPO2944 YPO3878 YPO3881 YPO4041
  Sty:  PSLT016 STM0022 STM0027 STM0176 STM0197 STM0300 STM0336
        STM0339 STM0545 STM2151 STM3027 STM3639 STM4573 STM4594
  Pae:  PA0499 PA0993 PA2129 PA2132 PA4083 PA4085 PA4651
  Xfa:  XF0082
  Rso:  RSc2694 RSp1499
  Atu:  AGl297
  Sme:  SMa1597
  Mlo:  mll7725
  Rco:  RC0639
_______

[S] COG3122 Uncharacterized protein conserved in bacteria
  Eco:  yaiL
  EcZ:  ZyaiL
  Ecs:  ECs0409
  Ype:  YPO1575
  Sty:  STM4192
  Pae:  PA0937
  Xfa:  XF1608
_______

[S] COG3123 Uncharacterized protein conserved in bacteria
  Eco:  yaiE
  EcZ:  ZyaiE
  Ecs:  ECs0441
  Ype:  YPO3213
  Sty:  STM0391
  Vch:  VCA0970
  Pae:  PA1574
  Rso:  RSc2552
_______

[S] COG3124 Uncharacterized protein conserved in bacteria
  Eco:  yajB
  EcZ:  ZyajB
  Ecs:  ECs0455
  Ype:  YPO3193
  Sty:  STM0403
  Vch:  VCA0769
  Pae:  PA4353
_______

[C] COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4
  Sau:  SA0910
  Lin:  lin0016
  Bsu:  BS_ctaF BS_qoxD
  Bha:  BH2067 BH2612
  Eco:  cyoD
  EcZ:  ZcyoD
  Ecs:  ECs0483
  Ype:  YPO3167
  Sty:  STM0440
  Buc:  BU469
  Pae:  PA1320
  Xfa:  XF1387
  Rso:  RSc1861 RSc2914
  Atu:  AGc223
  Bme:  BMEI1898
  Mlo:  mlr6849
  Ccr:  CC1770
_______

[S] COG3126 Uncharacterized protein conserved in bacteria
  Eco:  ybaY
  EcZ:  ZybaY
  Ecs:  ECs0507
  Ype:  YPO3140
  Sty:  STM0465
  Vch:  VC1064
  Pae:  PA3674 PA4058
  Atu:  AGc4472_1
  Bme:  BMEI1255_1
  Mlo:  mlr7916_1
_______

[Q] COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
  Eco:  ybbP
  EcZ:  ZybbP
  Ecs:  ECs0559
  Ype:  YPO3078
  Sty:  STM0508
  Vch:  VCA0781
  Pae:  PA2858
  Rso:  RSc2091
  Atu:  AGc4860
  Sme:  SMc03838
  Bme:  BMEI1860
  Mlo:  mll4345
  Ccr:  CC1758
_______

[S] COG3128 Uncharacterized iron-regulated protein
  Eco:  ybiX
  EcZ:  ZybiX
  Ecs:  ECs0882
  Pae:  PA4515
  Xfa:  XF0598
  Mlo:  mlr4439
  Ccr:  CC0027
_______

[R] COG3129 Predicted SAM-dependent methyltransferase
  Spo:  SPAC27D7.08c
  Eco:  ybiN
  EcZ:  ZybiN
  Ecs:  ECs0885
  Ype:  YPO2519
  Sty:  STM0826
  Vch:  VC1614
  Pae:  PA3840
_______

[J] COG3130 Ribosome modulation factor
  Eco:  rmf
  EcZ:  Zrmf
  Ecs:  ECs1037
  Ype:  YPO1423a
  Sty:  STM1066
  Vch:  VC1484
  Pae:  PA3049
_______

[P] COG3131 Periplasmic glucans biosynthesis protein
  Eco:  mdoG ydcG
  EcZ:  ZmdoG ZydcG
  Ecs:  ECs1426 ECs2029
  Sty:  STM1150 STM1622
  Vch:  VC1288
  Pae:  PA5078
  Xfa:  XF2682
  Rso:  RSc2908 RSc3057 RSp0262
_______

[S] COG3132 Uncharacterized protein conserved in bacteria
  Eco:  yceH
  EcZ:  ZyceH
  Ecs:  ECs1445
  Ype:  YPO2042_1
  Sty:  STM1168
  Vch:  VCA0740
  Pae:  PA3453
  Mlo:  mll4256
_______

[M] COG3133 Outer membrane lipoprotein
  Eco:  slyB
  EcZ:  ZslyB
  Ecs:  ECs2350
  Ype:  YPO2373 YPO3646
  Sty:  STM1445
  Pae:  PA1053
  Hin:  HI1579
  Pmu:  PM0554
  Rso:  RSc2792
_______

[S] COG3134 Predicted outer membrane lipoprotein
  Eco:  ycfJ
  EcZ:  ZycfJ
  Ecs:  ECs1488
  Ype:  YPO1624
  Sty:  STM1212
  Pae:  PA3819
  Xfa:  XF0178
_______

[Q] COG3135 Uncharacterized protein involved in benzoate metabolism
  Dra:  DR0056 DR1336
  Cgl:  Cgl2358
  Eco:  ydcO
  EcZ:  Z2286
  Ecs:  ECs2038
  Sty:  STM1606
  Vch:  VC1970
  Pae:  PA1651
  Sme:  SMc02691
  Bme:  BMEI2012
  Mlo:  mlr5064
_______

[R] COG3136 Uncharacterized membrane protein required for alginate biosynthesis
  Eco:  ydgC
  EcZ:  ZydgC
  Ecs:  ECs2313
  Ype:  YPO1863
  Sty:  STM1476
  Vch:  VCA0633
  Pae:  PA3585
  Mlo:  mlr8402
_______

[M] COG3137 Putative salt-induced outer membrane protein
  Eco:  ydiY
  EcZ:  Z2751
  Ecs:  ECs2428
  Ype:  YPO3290
  Sty:  STM1327
  Vch:  VC0370
  Xfa:  XF1628
_______

[E] COG3138 Arginine/ornithine N-succinyltransferase beta subunit
  Eco:  astA
  EcZ:  Z2779
  Ecs:  ECs2453
  Ype:  YPO1963
  Sty:  STM1304
  Vch:  VC2617
  Pae:  PA0896 PA0897
  Ccr:  CC0581 CC1606
_______

[S] COG3139 Uncharacterized protein conserved in bacteria
  Eco:  yeaC
  EcZ:  Z2816
  Ecs:  ECs2486
  Ype:  YPO2159
  Sty:  STM1292
  Vch:  VC1996
  Pae:  PA3085
_______

[S] COG3140 Uncharacterized protein conserved in bacteria
  Eco:  yoaH
  EcZ:  Z2854
  Ecs:  ECs2520
  Ype:  YPO1774
  Sty:  STM1823
  Vch:  VCA0569
  Hin:  HI1434.2
  Pmu:  PM0480
_______

[S] COG3141 Uncharacterized protein conserved in bacteria
  Eco:  yebG
  EcZ:  ZyebG
  Ecs:  ECs2558
  Ype:  YPO1777
  Sty:  STM1882
  Vch:  VC2326
  Pae:  PA3413
_______

[P] COG3142 Uncharacterized protein involved in copper resistance
  Fnu:  FN0469
  Lla:  L56431
  Spy:  SPy0408
  Spn:  SP1260
  Lin:  lin0025 lin1017
  Eco:  cutCm
  EcZ:  ZcutCm
  Ecs:  ECs2584
  Ype:  YPO2048
  Sty:  STM1907
  Vch:  VC0730
  Pmu:  PM0526
  Xfa:  XF1341
  Atu:  AGc4698
  Sme:  SMc02879
  Mlo:  mlr1122
  Ccr:  CC2360
_______

[NT] COG3143 Chemotaxis protein
  Eco:  cheZ
  EcZ:  ZcheZ
  Ecs:  ECs2591
  Ype:  YPO1681
  Sty:  STM1915
  Vch:  VC2064
  Pae:  PA1457
  Rso:  RSc0742 RSp1401
_______

[N] COG3144 Flagellar hook-length control protein
  Tma:  TM0672
  Cac:  CAC2157
  Bsu:  BS_fliK
  Bha:  BH2452
  Eco:  fliK
  EcZ:  ZfliK
  Ecs:  ECs2682
  Ype:  YPO0743 YPO1825
  Sty:  STM1974
  Buc:  BU079
  Vch:  VC2128
  Pae:  PA1441
  Rso:  RSp0395
_______

[L] COG3145 Alkylated DNA repair protein
  Spo:  SPAP8A3.02c SPBC13G1.04c
  Cgl:  Cgl0144
  Mtu:  Rv0999a
  MtC:  MT1029
  Mle:  ML0190
  Nos:  all7279
  Eco:  alkB
  EcZ:  ZalkB
  Ecs:  ECs3101
  Sty:  STM2264
  Vch:  VCA0961
  Pae:  PA3306
  Xfa:  XF1299
  Rso:  RSc2568
  Atu:  AGc894
  Sme:  SMb20399 SMc02566
  Bme:  BMEII0739
  Mlo:  mlr5099 mlr6860 msr6861
  Ccr:  CC0009
_______

[S] COG3146 Uncharacterized protein conserved in bacteria
  Syn:  slr0656
  Nos:  all4102
  Pae:  PA3230
  Xfa:  XF1447
  Rso:  RSc2348
  Atu:  AGc2531
  Sme:  SMc02105
  Bme:  BMEI0818
  Mlo:  mlr0661
  Ccr:  CC2156
_______

[S] COG3147 Uncharacterized protein conserved in bacteria
  Eco:  dedD
  EcZ:  ZdedD
  Ecs:  ECs3198
  Ype:  YPO2770
  Sty:  STM2364
  Vch:  VC1002
  Pae:  PA3110
  Xfa:  XF1947
  Rso:  RSc1978
_______

[S] COG3148 Uncharacterized conserved protein
  Eco:  yfiP
  EcZ:  ZyfiP
  Ecs:  ECs3449
  Ype:  YPO3271
  Sty:  STM2650
  Vch:  VC0131 VC1533 VC1980
  Pae:  PA1424 PA3606
_______

[U] COG3149 Type II secretory pathway, component PulM
  Eco:  yghD
  Vch:  VC2724
  Pae:  PA0684 PA3095
  Rso:  RSc3112
_______

[R] COG3150 Predicted esterase
  Eco:  ycfP yqiA
  EcZ:  ZycfP ZyqiA
  Ecs:  ECs1486 ECs3919
  Ype:  YPO0667 YPO1616
  Sty:  STM1210 STM3182
  Vch:  VC1892 VC2432
  Pae:  PA4968
  Pmu:  PM0825
  Rso:  RSc2781
_______

[S] COG3151 Uncharacterized protein conserved in bacteria
  Eco:  yqiB
  EcZ:  ZyqiB
  Ecs:  ECs3921
  Ype:  YPO0665
  Sty:  STM3184
  Vch:  VC2434
  Pae:  PA4970
  Xfa:  XF1261
_______

[S] COG3152 Predicted membrane protein
  Lla:  L133792 L85895 L86448
  Sau:  SA2133
  Lin:  lin0679 lin0680
  Eco:  yhaH yhaI yiiR
  EcZ:  ZyhaH ZyhaI ZyiiR
  Ecs:  ECs3985 ECs3986 ECs4846
  Ype:  YPO0087
  Sty:  STM3234 STM4083
  Vch:  VC2668 VCA0927
  Pae:  PA0563 PA0659_2
  Sme:  SMc01089
  Mlo:  mlr4394 mlr4395 mlr4844 mlr4846 mlr5366
  Ccr:  CC2178 CC2778
_______

[R] COG3153 Predicted acetyltransferase
  Mac:  MA0446 MA1701
  Cgl:  Cgl1207
  Lla:  L1005
  Sau:  SA0435 SA0741
  Lin:  lin1847
  Nos:  all1321
  Eco:  yhbS yjhQ
  EcZ:  ZyhbS
  Ecs:  ECs4037
  Ype:  YPO3476
  Sty:  STM3272
  Vch:  VC0655 VCA0263
  Pae:  PA0711 PA2455
  Atu:  AGc3283 AGc4108 AGl3231
  Sme:  SMa0357 SMa0359 SMc00230 SMc02707 SMc02982
  Bme:  BMEI0456 BMEI0466
  Mlo:  mll2972 mll4853 mlr2800
  Ccr:  CC0405
_______

[I] COG3154 Putative lipid carrier protein
  Eco:  yhbT
  EcZ:  ZyhbT
  Ecs:  ECs4038
  Ype:  YPO3477
  Sty:  STM3273
  Vch:  VC0654
  Pae:  PA3911
  Rso:  RSp0968
  Atu:  AGl937
  Sme:  SMa1289
  Bme:  BMEII0958
_______

[Q] COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis
  Eco:  yhbL
  EcZ:  ZyhbL
  Ecs:  ECs4088
  Ype:  YPO3553
  Sty:  STM3327
  Vch:  VCA0610
  Pae:  PA5245
_______

[U] COG3156 Type II secretory pathway, component PulK
  Eco:  gspK
  Ype:  YPO0809
  Vch:  VC2726
  Pae:  PA0682 PA3097
  Xfa:  XF1523
  Rso:  RSc3110
  Mlo:  mlr6818
  Ccr:  CC0180
_______

[S] COG3157 Hemolysin-coregulated protein (uncharacterized)
  Eco:  yhhZ_1
  EcZ:  Z0248 Z0266
  Ecs:  ECs0216 ECs0234
  Ype:  YPO0502 YPO0973 YPO1470 YPO1872 YPO2793 YPO2868 YPO2937
        YPO2962 YPO3708
  Sty:  STM0276 STM0279 STM3131 STM4509
  Vch:  VC1415 VCA0017
  Pae:  PA0085 PA0263 PA1512 PA2367 PA5267
  Rso:  RSp0745
  Atu:  AGl1037
  Mlo:  mlr2339
_______

[P] COG3158 K+ transporter
  Mac:  MA3179
  Cgl:  Cgl0692
  Lla:  L11749 L9458
  Spy:  SPy1414
  Eco:  kup
  EcZ:  Zkup
  Ecs:  ECs4689
  Ype:  YPO0006
  Sty:  STM3880
  Vch:  VCA0529
  Pae:  PA0917
  Xfa:  XF1903
  Rso:  RSc1621 RSp1052
  Atu:  AGc1288 AGpA688
  Sme:  SMa1798 SMc00873
  Bme:  BMEI0622
  Mlo:  mll1416 mll1417
  Ccr:  CC0131
_______

[S] COG3159 Uncharacterized protein conserved in bacteria
  Eco:  yigA
  EcZ:  ZyigA
  Ecs:  ECs4740
  Ype:  YPO3844
  Sty:  STM3948
  Vch:  VC0127
  Pae:  PA5279
  Pmu:  PM1702
  Xfa:  XF1482
  Rso:  RSc0053
  Ccr:  CC0345
_______

[K] COG3160 Regulator of sigma D
  Eco:  rsd
  EcZ:  ZyjaE
  Ecs:  ECs4918
  Ype:  YPO3737
  Sty:  STM4165
  Vch:  VC0330
  Pae:  PA5255
_______

[H] COG3161 4-hydroxybenzoate synthetase (chorismate lyase)
  Afu:  AF1396
  Mac:  MA4189
  Mth:  MTH1632
  Mja:  MJ0807
  Mka:  MK0119
  Mtu:  Rv2949c
  MtC:  MT3022
  Mle:  ML0133
  Eco:  ubiC
  EcZ:  ZubiC
  Ecs:  ECs5022
  Ype:  YPO0310
  Sty:  STM4233
  Vch:  VC0095
  Pae:  PA5357
  Pmu:  PM0918
  Nme:  NMB0734
  NmA:  NMA0944
  Rso:  RSc2780
_______

[S] COG3162 Predicted membrane protein
  Dra:  DR0476
  Cgl:  Cgl0809
  Bsu:  BS_ywcB
  Eco:  yjcH
  EcZ:  ZyjcH
  Ecs:  ECs5050
  Ype:  YPO0252
  Sty:  STM4274
  Pae:  PA3235
  Xfa:  XF2252
_______

[S] COG3164 Predicted membrane protein
  Eco:  yhdR+P
  EcZ:  Z4604
  Ecs:  ECs4118
  Ype:  YPO3670
  Sty:  STM3369
  Vch:  VC0420
  Pae:  PA4476
  Xfa:  XF1126
  Rso:  RSc2657
_______

[S] COG3165 Uncharacterized protein conserved in bacteria
  Eco:  yigP
  EcZ:  ZyigP
  Ecs:  ECs4764
  Ype:  YPO3780
  Sty:  STM3971
  Vch:  VC0084
  Pae:  PA5064
  Pmu:  PM1687
  Xfa:  XF1832
  Nme:  NMB0808
  NmA:  NMA1018
  Rso:  RSc0460
_______

[NU] COG3166 Tfp pilus assembly protein PilN
  Syn:  slr1275
  Nos:  alr1029
  Eco:  yrfC
  EcZ:  ZyrfC
  Ecs:  ECs4236
  Ype:  YPO0147
  Sty:  STM3491
  Vch:  VC2633
  Pae:  PA5043
  Xfa:  XF0370 XF1524
  Nme:  NMB1809
  NmA:  NMA0653
  Rso:  RSc2974
  Mlo:  mlr6815
_______

[NU] COG3167 Tfp pilus assembly protein PilO
  Vch:  VC2632
  Pae:  PA5042
  Xfa:  XF0371
  Nme:  NMB1810
  NmA:  NMA0652
  Rso:  RSc2973
_______

[NU] COG3168 Tfp pilus assembly protein PilP
  Vch:  VC2631
  Pae:  PA5041
  Xfa:  XF0372
  Nme:  NMB1811
  NmA:  NMA0651
  Rso:  RSc2972
_______

[S] COG3169 Uncharacterized protein conserved in bacteria
  Dra:  DR0811
  Vch:  VC1574
  Pae:  PA1577
  Xfa:  XF0449
  Sme:  SMc04230
  Bme:  BMEI0505
_______

[NU] COG3170 Tfp pilus assembly protein FimV
  Vch:  VC0998_1
  Pae:  PA3115 PA3340
  Xfa:  XF1372
  Nme:  NMB0341
  NmA:  NMA2146
  Rso:  RSc1986 RSp0189
_______

[S] COG3171 Uncharacterized protein conserved in bacteria
  Eco:  yggL
  EcZ:  ZyggL
  Ecs:  ECs3835
  Ype:  YPO0950
  Sty:  STM3108
  Pae:  PA1842 PA3046
  Hin:  HI0341
  Pmu:  PM1316
  Nme:  NMB1931
  NmA:  NMA0522
_______

[H] COG3172 Predicted ATPase/kinase involved in NAD metabolism
  Mtu:  Rv0212c_2
  MtC:  MT0222_2
  Lla:  L0242_2
  Eco:  nadR_3
  EcZ:  ZnadR_3
  Ecs:  ECs5348_3
  Ype:  YPO0444_3
  Sty:  STM4580_3
  Pae:  PA1957
  Hin:  HI0763_3
  Pmu:  PM1387_3
_______

[R] COG3173 Predicted aminoglycoside phosphotransferase
  Hbs:  VNG2172C
  Mac:  MA3040
  Dra:  DRA0194
  Mtu:  Rv3168 Rv3225c_2 Rv3761c
  MtC:  MT3257 MT3323_2 MT3868
  Lla:  L63227
  Lin:  lin2190
  Bsu:  BS_ycbJ
  Bha:  BH0381 BH2734_1
  Pae:  PA1829
  Rso:  RSc2016
  Atu:  AGc3771
  Sme:  SMc04360
  Mlo:  mll1809 mlr3099
  Ccr:  CC0299 CC1233 CC1435
  Rco:  RC0947
_______

[S] COG3174 Predicted membrane protein
  Hbs:  VNG1525C
  Mac:  MA1450
  Mth:  MTH1450 MTH1451
  Mka:  MK0294
  Ape:  APE1373
  Aae:  aq_1829 aqq_04
  Pae:  PA0043
  Rso:  RSc0182
  Sme:  SMa1159 SMa1160 SMa1161
  Mlo:  mll6588
_______

[O] COG3175 Cytochrome oxidase assembly factor
  Sce:  YPL132w
  Spo:  SPAC1420.04c_2
  Pae:  PA0107
  Rso:  RSc0365
  Atu:  AGc1406
  Sme:  SMc00012
  Bme:  BMEI1463
  Mlo:  mlr7495
  Ccr:  CC3403
  Rpr:  RP304
  Rco:  RC0408
_______

[R] COG3176 Putative hemolysin
  Mtu:  Rv3027c
  MtC:  MT3111
  Nos:  alr0228
  Vch:  VC0489 VCA0646
  Pae:  PA4350
  Rso:  RSc1538
  Atu:  AGc599
  Sme:  SMc01127 SMc02490
  Bme:  BMEI1800
  Mlo:  mll0913 mlr3216
  Ccr:  CC3533
_______

[S] COG3177 Uncharacterized conserved protein
  Hbs:  VNG6349C
  Mac:  MA1868 MA2133
  Aae:  aq_aa38
  Fnu:  FN0017 FN0255 FN0971
  Cgl:  Cgl0116 Cgl2758
  Spy:  SPy0558
  Sau:  SA1431
  Lin:  pli0008
  Nos:  alr0501 alr0502
  EcZ:  Z5009
  Ecs:  ECs4465
  Ype:  YPO0445 YPO0874
  Pae:  PA0574
  Pmu:  PM1770
  Nme:  NMB0459 NMB1423 NMB1759
  NmA:  NMA1635 NMA2029
  Rso:  RSc3413
  Hpy:  HP0712 HP0713
  jHp:  jhp0651
  Atu:  AGpA503 AGpA51 AGpA556
  Sme:  SMa2105
  Mlo:  mll5800 mll6421 mlr2757
  Rco:  RC0529
_______

[R] COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases
  Pae:  PA0596
  Xfa:  XF0592
  Nme:  NMB0279
  NmA:  NMA2208
  Rso:  RSc0514
  Atu:  AGc43_2
  Sme:  SMc02757_2
  Bme:  BMEI2026_2
  Mlo:  mll5086_2
  Ccr:  CC3535
_______

[R] COG3179 Predicted chitinase
  Dra:  DRA0117
  Sty:  STM0907 STM1869A
  Pae:  PA0629
  Hin:  HI1415
  Sme:  SMb20518 SMb20922 SMc03769_1
_______

[R] COG3180 Putative ammonia monooxygenase
  Fnu:  FN0532
  Cgl:  Cgl0138
  Sau:  SA1490
  Bsu:  BS_yhjN
  Bha:  BH3837
  Nos:  alr3248
  Eco:  abrB
  EcZ:  ZabrB
  Ecs:  ECs0740
  Sty:  STM0729
  Vch:  VCA0629
  Pae:  PA0751
  Atu:  AGc342
  Sme:  SMc01415
  Mlo:  mlr2782
_______

[S] COG3181 Uncharacterized protein conserved in bacteria
  Fnu:  FN2103
  Cgl:  Cgl2764
  Bsu:  BS_yflP
  Bha:  BH2007
  Sty:  STM2786
  Vch:  VC1334
  Pae:  PA0754 PA2209
  Pmu:  PM1679
  Rso:  RSc2963 RSc3088
  Atu:  AGc180 AGc4482 AGl312 AGpA473
  Sme:  SMa1927 SMb20025 SMb20724 SMb20771 SMb21043 SMc00499
_______

[S] COG3182 Uncharacterized iron-regulated membrane protein
  Cgl:  Cgl2275
  Sau:  SA1275
  Bha:  BH0982 BH1854
  Vch:  VCA0891
  Pae:  PA0801 PA1909 PA2403 PA2465 PA3789 PA4219 PA4513_1
  Nme:  NMB1721
  NmA:  NMA1975
  Rso:  RSp1642
  Atu:  AGc3630
  Ccr:  CC1782 CC2927 CC3501
_______

[V] COG3183 Predicted restriction endonuclease
  Mac:  MA3494
  Dra:  DR1726
  Sty:  STM0159
  Vch:  VCA0309
  Pae:  PA0820
  Mlo:  mll7993
_______

[S] COG3184 Uncharacterized protein conserved in bacteria
  Pae:  PA0856
  Xfa:  XF0196
  Nme:  NMB0673
  NmA:  NMA0873
  Atu:  AGc2970
  Sme:  SMc00153
  Bme:  BMEI0973
  Mlo:  mll0525
_______

[ER] COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
  Cgl:  Cgl0417_2
  Syn:  slr0090
  Nos:  all0771
  Vch:  VC1344
  Pae:  PA0242_2 PA0865
  Rso:  RSc3103 RSp1316 RSp1347 RSp1400_2
  Atu:  AGl678_2
  Sme:  SMb20581_2 SMc03211
  Mlo:  mll8309
  Ccr:  CC2533
_______

[E] COG3186 Phenylalanine-4-hydroxylase
  Vch:  VCA0828
  Pae:  PA0872
  Rso:  RSc3355
  Mlo:  mlr4831
  Ccr:  CC1612
  Cpn:  CPn1046
_______

[O] COG3187 Heat shock protein
  Mac:  MA2853
  Fnu:  FN0916
  Dra:  DR1940 DR2056
  Cgl:  Cgl0135
  Syn:  slr0841
  Eco:  hslJ
  EcZ:  ZhslJ
  Ecs:  ECs2001
  Ype:  YPO2330
  Sty:  STM1648
  Vch:  VC1663
  Pae:  PA0925
  Rso:  RSc0694
  Hpy:  HP1462
  jHp:  jhp1355
  Cje:  Cj0950c
  Atu:  AGc4472_2
  Sme:  SMc03106_1
  Bme:  BMEI1255_2
  Mlo:  mlr7916_2
_______

[NU] COG3188 P pilus assembly protein, porin PapC
  Syn:  slr0019
  Eco:  fimD htrE sfmD ybgQ ycbS ydeT yehB
        yfcUm yhcD yqiG yraJ
  EcZ:  Z0022 Z1288m Z1536 Z2203 Z3600 Z4968m Z5222
        ZfimD ZhtrE ZsfmD ZybgQ ZyehB ZyraJ
  Ecs:  ECs0022 ECs0143 ECs0594 ECs0743 ECs1023 ECs1024 ECs1278
        ECs2110 ECs2915 ECs3221 ECs4022 ECs4428 ECs4429 ECs4667
        ECs5276
  Ype:  YPMT1.83 YPO0302 YPO0698 YPO1305 YPO1696 YPO1709 YPO1920
        YPO3879
  Sty:  PSLT017 STM0023 STM0175 STM0196 STM0301 STM0338 STM0546
        STM2150 STM3028 STM3638 STM4572 STM4593
  Pae:  PA0994 PA2130 PA4084 PA4652
  Xfa:  XF0081
  Rso:  RSc2693 RSp1498
  Atu:  AGl299
  Mlo:  mll7724
  Rco:  RC0641
_______

[S] COG3189 Uncharacterized conserved protein
  Tac:  Ta0666
  Tvo:  TVN1370
  Sso:  SSO1867
  Cgl:  Cgl0782
  Mtu:  Rv3073c
  MtC:  MT3158
  Sau:  SA0230
  Eco:  yeaO
  EcZ:  ZyeaO
  Ecs:  ECs2501
  Sty:  STM1277
  Pae:  PA1065
  Rso:  RSp1510
  Atu:  AGl939
  Sme:  SMb21412
  Bme:  BMEII0787
  Mlo:  mll7394
_______

[N] COG3190 Flagellar biogenesis protein
  Bsu:  BS_fliZ
  Bha:  BH2443
  Eco:  fliO
  EcZ:  ZfliO
  Ecs:  ECs2686
  Ype:  YPO1821
  Sty:  STM1978
  Buc:  BU082_1
  Vch:  VC2124
  Pae:  PA1445
  Rso:  RSp0376
  Ctr:  CT102
  Cpn:  CPn0408
_______

[EQ] COG3191 L-aminopeptidase/D-esterase
  Pho:  PH0078
  Pab:  PAB0045
  Sso:  SSO1540
  Dra:  DR0782
  Cgl:  Cgl2463
  Mtu:  Rv1333
  MtC:  MT1375
  Mle:  ML1167
  Pae:  PA1486
  Rso:  RSc1383
  Atu:  AGc4562 AGc4649 AGpA343
  Sme:  SMa0095 SMc00512
  Bme:  BMEII0741 BMEII0898
  Mlo:  mll0085 mll6895 mlr2477
  Ccr:  CC2187
_______

[E] COG3192 Ethanolamine utilization protein
  Fnu:  FN0089
  Lin:  lin1150
  Bsu:  BS_yxeR
  Eco:  eutH
  EcZ:  ZeutH
  Ecs:  ECs3314
  Sty:  STM2460
  Pae:  PA1491
_______

[R] COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
  Pya:  PAE2686
  Sso:  SSO1224
  Lin:  lin1128_2
  Syn:  sll1307 slr1406
  Eco:  glcG
  Sty:  STM2050_2
  Pae:  PA1329 PA1503 PA5352
  Rso:  RSc1967
  Atu:  AGc2067
  Bme:  BMEI0273
  Mlo:  mlr3780 msr9402
  Ccr:  CC2181
_______

[F] COG3194 Ureidoglycolate hydrolase
  Sce:  YIR032c
  Spo:  SPAC19G12.04
  Eco:  allA
  EcZ:  ZybbT
  Ecs:  ECs0566
  Sty:  STM0515
  Pae:  PA1514
  Atu:  AGc2603 AGc4225
  Sme:  SMb20677 SMb20873
  Bme:  BMEI1430
  Mlo:  mll5130
_______

[S] COG3195 Uncharacterized protein conserved in bacteria
  Dra:  DR1158
  Cgl:  Cgl2307_2
  Bsu:  BS_yunL_1
  Bha:  BH0758
  Pae:  PA1516
  Rso:  RSc2121
  Atu:  AGc4230
  Sme:  SMb20874 SMb21284_2
  Bme:  BMEI1577_2
  Mlo:  mll5132_2
  Ccr:  CC2606
_______

[S] COG3196 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2295
  MtC:  MT2352
  Eco:  yieJ
  Pae:  PA1536
_______

[P] COG3197 Uncharacterized protein, possibly involved in nitrogen fixation
  Vch:  VC1436
  Pae:  PA1548
  Nme:  NMB1516
  NmA:  NMA1716
  Rso:  RSc1275
  Hpy:  HP1163
  jHp:  jhp1090
  Cje:  Cj1154c
  Sme:  SMa0622 SMa1208
  Mlo:  msl6623 msr6418
  Ccr:  CC1408
_______

[S] COG3198 Uncharacterized protein conserved in bacteria
  Vch:  VC1438
  Pae:  PA1550
  Nme:  NMB1453
  NmA:  NMA1667
_______

[S] COG3199 Uncharacterized conserved protein
  Afu:  AF0748
  Hbs:  VNG0764C
  Tac:  Ta1068
  Tvo:  TVN0523
  Pho:  PH1675
  Pab:  PAB0335
  Sso:  SSO0869 SSO1527
  Ape:  APE1825
  Pae:  PA1572 PA4149
_______

[E] COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
  Cgl:  Cgl2130
  Mtu:  Rv2178c
  MtC:  MT2234
  Mle:  ML0896
  Pae:  PA1901 PA2843 PA4212
  Hpy:  HP0134
  jHp:  jhp0122
  Cje:  Cj0716
  Atu:  AGc2964
  Sme:  SMc00155
  Bme:  BMEI0971
  Mlo:  mll0826
  Ccr:  CC2300
_______

[H] COG3201 Nicotinamide mononucleotide transporter
  Cgl:  Cgl0064
  Lla:  L100822
  Spy:  SPy1329
  Spn:  SP1859
  Eco:  pnuC
  EcZ:  ZpnuC
  Ecs:  ECs0779
  Ype:  YPO1128
  Sty:  STM0757 STM3911
  Pae:  PA1958
  Hin:  HI1077a
  Pmu:  PM1838
  Hpy:  HP1290
  jHp:  jhp1210
_______

[C] COG3202 ATP/ADP translocase
  Ecu:  ECU08g1300 ECU10g0420 ECU10g0520 ECU10g0540
  Xfa:  XF1738
  Rpr:  RP053 RP377 RP477 RP500 RP739
  Rco:  RC0081 RC0522 RC0666 RC0722 RC1138
  Ctr:  CT065 CT495
  Cpn:  CPn0351 CPn0614
_______

[M] COG3203 Outer membrane protein (porin)
  Eco:  b1964 b1965 nmpC ompC ompF ompN phoE
        yddL yedS
  EcZ:  Z2239 Z2333 Z2334 Z3057 Z3058 ZompC ZompF
        ZphoE
  Ecs:  ECs0268 ECs1012 ECs1998 ECs1999 ECs2076 ECs2702 ECs2703
        ECs3104
  Ype:  YPO1205 YPO1222 YPO1411
  Sty:  STM0320 STM0509 STM0999 STM1473 STM1530 STM1572 STM1995
        STM2267
  Buc:  BU359
  Vch:  VC0633 VC0972 VC1854 VCA1008
  Hin:  HI0139
  Pmu:  PM0388 PM0389 PM0831
  Nme:  NMB1429 NMB2039
  NmA:  NMA0398 NMA1642
  Rso:  RSc1082 RSc1084 RSc1236 RSc1737 RSc2108 RSc2122 RSc2136
        RSc2760 RSc2855 RSc2933 RSc3091 RSc3390 RSp0051 RSp0337
        RSp0660 RSp0955 RSp1399 RSp1594
_______

[S] COG3204 Uncharacterized protein conserved in bacteria
  Syn:  sll0656_1
  Eco:  yjiK
  EcZ:  Z5143 ZyjiK
  Ecs:  ECs4591 ECs5294
  Sty:  PSLT007 PSLT010 STM4310
  Pae:  PA0319 PA0327 PA2017
_______

[S] COG3205 Predicted membrane protein
  Hbs:  VNG1000H
  Vch:  VC0426
  Pae:  PA2183 PA3237
  Nme:  NMB0028
  Ccr:  CC0155
_______

[M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis
  Aae:  aq_506
  Tma:  TM0644_1
  Syn:  sll0923_1
  Nos:  all0059_1 all0493_1 all4432_1 all5222_1 alr2295 alr2833_1 alr2856_1
        alr3059_1
  Eco:  wzc_1 yccC_1
  EcZ:  Z3224_1 ZyccC_1
  Ecs:  ECs1137_1 ECs2865_1
  Sty:  STM2116_1
  Vch:  VC0937_1
  Pae:  PA2235
  Pmu:  PM1018_1
  Xfa:  XF2369
  Rso:  RSp1018_1
  Atu:  AGc1041 AGc2284_1 AGc4313 AGl1614_1 AGl175_1 AGl2554_1
  Sme:  SMb20961_1 SMb21070_1 SMb21240_1 SMb21506 SMc01795_1
  Bme:  BMEII0852 BMEII1132
  Mlo:  mll2090_1 mlr5276_1 mlr6506 mlr6756_1 mlr8439_1
  Ccr:  CC0164_1 CC2431
_______

[Q] COG3207 Pyoverdine/dityrosine biosynthesis protein
  Sce:  YDR403w
  Vch:  VC1949_1
  Pae:  PA2254
_______

[Q] COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis
  Cac:  CAC1022
  Mtu:  Rv2383c_3 Rv2928
  MtC:  MT2451_3 MT2998
  Mle:  ML2359
  Bsu:  BS_srfAD
  Bha:  BH1838
  Nos:  alr2045 asl2657
  Ype:  YPO0773 YPO1908
  Pae:  PA2302_4 PA2411 PA2425 PA4229
  Rso:  RSc1804_2
  Atu:  AGl2306
  Mlo:  mlr9053_2
_______

[M] COG3209 Rhs family protein
  Mac:  MA2043 MA2045
  Cac:  CAC1057 CAC1061
  Lin:  lin0454
  Bsu:  BS_wapA
  Eco:  rhsA rhsB rhsC rhsD rhsE ybfO yibJ
        ylbH
  EcZ:  Z0268 Z0272 Z0651 Z0702 Z0705 Z0851 Z2257
        Z2259 Z2261 Z5485 Z5487 Z5488 ZrhsA ZrhsC
        ZyibJ
  Ecs:  ECs0237 ECs0242 ECs0560 ECs0603 ECs0605 ECs0729 ECs2061
        ECs4470 ECs4864
  Ype:  YPO0762 YPO2312_1 YPO2380 YPO3608 YPO3609 YPO3615 YPO3673
        YPO3674
  Sty:  STM0291 STM0292
  Pae:  PA2457 PA2458 PA2684
  Rso:  RSc2470 RSp0085 RSp0086 RSp0096 RSp0151 RSp0157 RSp0449
        RSp0454 RSp0455 RSp0456 RSp0457 RSp0458 RSp0459 RSp0476
        RSp0477 RSp1137 RSp1305 RSp1335 RSp1585
  Mlo:  mll6838_2
_______

[U] COG3210 Large exoproteins involved in heme utilization or adhesion
  Fnu:  FN0132 FN0290 FN0291 FN1817
  Syn:  slr1753_1
  Nos:  all2171 all4433 all5104 all5105 all5106 all5107 all5108
        all5110 all5111 all5112 all5113 all5114 all5115 all5280
        all7072 all7235 all7313 alr0366 alr0367 alr1184 alr1397
        alr1906
  EcZ:  Z1542
  Ecs:  ECs1282
  Ype:  YPO0599 YPO2045 YPO2486 YPO2490 YPO3247 YPO3721 YPO4006
  Pae:  PA0041 PA0690 PA2462 PA4082 PA4541 PA4625
  Hin:  HI0264
  Pmu:  PM0057 PM0059
  Xfa:  XF0889 XF0893 XF0897 XF2196 XF2775
  Nme:  NMB0490 NMB0493 NMB0497 NMB0499 NMB0502 NMB0506 NMB0511
        NMB1214 NMB1768 NMB1772 NMB1775 NMB1779
  NmA:  NMA0688 NMA0690 NMA0692
  Rso:  RSc0887 RSc1775 RSc3183 RSc3188 RSp0540 RSp1071 RSp1073
        RSp1444 RSp1536 RSp1539 RSp1545
  Cje:  Cj0737 Cj0968
  Ccr:  CC0602
_______

[R] COG3211 Predicted phosphatase
  Bha:  BH3904
  Nos:  all8079 alr0132 alr4794
  Vch:  VCA0033
  Pae:  PA2635
  Cje:  Cj0145
  Atu:  AGl902
  Sme:  SMc02634
  Mlo:  mll4564 mlr0764
  Ccr:  CC1375
_______

[S] COG3212 Predicted membrane protein
  Mac:  MA0533
  Fnu:  FN0583 FN2085
  Spy:  SPy1686
  Sau:  SA0359
  Lin:  lin0040
  Bsu:  BS_ykoI BS_ykoJ
  Bha:  BH0374 BH0375
  Vch:  VC1637
  Pae:  PA2658 PA2659
  Nme:  NMB0266
  NmA:  NMA2220
  Mlo:  mlr6616
  Ccr:  CC1303 CC2767
_______

[P] COG3213 Uncharacterized protein involved in response to NO
  Vch:  VC2330
  Pae:  PA2662
  Nme:  NMB0439 NMB0552
  NmA:  NMA0732 NMA2046
  Rso:  RSc3399
  Atu:  AGl924 AGl968
  Sme:  SMa1194 SMa1252
  Bme:  BMEII0964
_______

[S] COG3214 Uncharacterized protein conserved in bacteria
  Dra:  DR2072
  Mtu:  Rv2762c
  MtC:  MT2832
  Eco:  ycaQ
  EcZ:  ZycaQ
  Ecs:  ECs0999
  Sty:  STM0986
  Pae:  PA2844
  Atu:  AGc1364
  Sme:  SMc00961
  Mlo:  mlr1373
  Ccr:  CC3324
_______

[NU] COG3215 Tfp pilus assembly protein PilZ
  Pae:  PA2960
  Xfa:  XF0677
  Nme:  NMB0770
  NmA:  NMA0981
  Rso:  RSc1786
_______

[S] COG3216 Uncharacterized protein conserved in bacteria
  Syn:  sll0298
  Vch:  VC1880
  Pae:  PA2985
  Atu:  AGc1901
  Sme:  SMc02655
  Bme:  BMEI1290
  Mlo:  mlr7760 msr8675
_______

[R] COG3217 Uncharacterized Fe-S protein
  Hbs:  VNG1735C
  Nos:  alr2305
  Eco:  ycbX_1
  EcZ:  Z1297_1
  Ecs:  ECs1031_1
  Ype:  YPO1417_1
  Sty:  STM1060_1
  Vch:  VCA0924_1
  Pae:  PA3022
  Atu:  AGc1923
  Sme:  SMc02631
  Mlo:  mlr4090
  Ccr:  CC0872
_______

[R] COG3218 ABC-type uncharacterized transport system, auxiliary component
  Pae:  PA3214
  Xfa:  XF1300
  Cje:  Cj1649
  Atu:  AGc3031
  Sme:  SMc00177
  Bme:  BMEI0962
  Mlo:  mll0797
  Ccr:  CC2321
_______

[S] COG3219 Uncharacterized protein conserved in bacteria
  Pae:  PA3282 PA4105
  Hin:  HI1599
  Pmu:  PM0210
  Nme:  NMB2143
  NmA:  NMA0229
_______

[S] COG3220 Uncharacterized protein conserved in bacteria
  Cac:  CAC2465
  Pae:  PA3283 PA4106
  Hin:  HI1600
  Pmu:  PM0211
  Nme:  NMB2142
  NmA:  NMA0228
  Rso:  RSp1035
  Sme:  SMb20529
  Ccr:  CC2906 CC3255
_______

[P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component
  Hbs:  VNG2086G
  Pya:  PAE2700
  Fnu:  FN1135
  Cgl:  Cgl1426
  Mtu:  Rv1680
  MtC:  MT1720
  Lla:  L96217
  Sau:  SA0138
  Bha:  BH0439 BH0468 BH2973
  Nos:  all2228 all2229 all2358 all8089 alr2738
  Eco:  phnD
  EcZ:  ZphnD
  Ecs:  ECs5087
  Ype:  YPO1183
  Vch:  VC1089
  Pae:  PA3313 PA3383 PA5101
  Atu:  AGc288
  Sme:  SMb21176
  Mlo:  mll1215 mlr3355 mlr5588
  Ccr:  CC0362
_______

[S] COG3222 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0540
  MtC:  MT0565
  Syn:  sll1095
  Nos:  all1764
  Pae:  PA3354
_______

[S] COG3223 Predicted membrane protein
  Lla:  L67275
  Lin:  lin0828
  Bsu:  BS_yrkR
  Eco:  yjbA
  EcZ:  ZyjbA
  Ecs:  ECs5013
  Ype:  YPO3717
  Sty:  STM4226
  Pae:  PA3403
  Hin:  HI0601.1
_______

[S] COG3224 Uncharacterized protein conserved in bacteria
  Dra:  DR2141
  Syn:  slr0069 slr1162
  Nos:  all0350
  Pae:  PA3436
_______

[N] COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
  Syn:  slr2105
  Nos:  alr1621
  Pae:  PA3670 PA4039
  Tpa:  TP0879
  Bbu:  BB0752
_______

[S] COG3226 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0775 Rv3066
  MtC:  MT0799 MT3151
  Eco:  ybjK
  EcZ:  Z1073
  Ecs:  ECs0926
  Sty:  STM0869
  Pae:  PA3699
_______

[E] COG3227 Zinc metalloprotease (elastase)
  Mac:  MA2075_1 MA2529
  Cac:  CAC2290_1 CAC2517 CAC2518
  Sau:  SA2430
  Bsu:  BS_nprB BS_nprE
  Nos:  all0983
  Vch:  VCA0865
  Pae:  PA3724
_______

[S] COG3228 Uncharacterized protein conserved in bacteria
  Syn:  slr2042
  Nos:  all4231
  Eco:  yeeI
  EcZ:  Z3132
  Ecs:  ECs2774
  Ype:  YPO1732
  Sty:  STM2001
  Pae:  PA4030
  Rso:  RSc1184
_______

[P] COG3230 Heme oxygenase
  Dra:  DRA0052m
  Pae:  PA0672 PA4116
  Nme:  NMB1669
  NmA:  NMA1927
  Atu:  AGc4545
_______

[J] COG3231 Aminoglycoside phosphotransferase
  Dra:  DR0066
  Mtu:  Rv3817
  MtC:  MT3925.1
  Lla:  L33782
  Pae:  PA4119
  Sme:  SMc02722 SMc03094
  Mlo:  mlr2696
_______

[E] COG3232 5-carboxymethyl-2-hydroxymuconate isomerase
  Dra:  DRA0227
  Ype:  YPO1765
  Sty:  STM1104
  Vch:  VC2669
  Pae:  PA1966 PA4125
  Pmu:  PM1532
  Rso:  RSc2419
  Bme:  BMEII0134
_______

[R] COG3233 Predicted deacetylase
  Mja:  MJ0505
  Pho:  PH1993
  Pab:  PAB1163
  Cgl:  Cgl2540
  Mtu:  Rv0784
  MtC:  MT0808
  Pae:  PA4312
  Rso:  RSp1672
_______

[S] COG3234 Uncharacterized protein conserved in bacteria
  Tma:  TM0986
  Eco:  yfaT
  EcZ:  Z3482
  Ecs:  ECs3112
  Pae:  PA4490
  Rso:  RSc3031
_______

[S] COG3235 Predicted membrane protein
  Vch:  VC1870
  Pae:  PA4532
  Nme:  NMB1066
  NmA:  NMA1265
_______

[S] COG3236 Uncharacterized protein conserved in bacteria
  Dra:  DR1263
  Cgl:  Cgl1654
  Nos:  all5029
  Eco:  ybiA
  Pae:  PA4580
_______

[S] COG3237 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl0230
  Lla:  L193031
  Spy:  SPy1261 SPy2005
  Spn:  SP1531 SP1805
  Sau:  SA0772 SA1452
  Lin:  lin2261
  Bsu:  BS_ywmG
  Nos:  asr1134 asr4653
  Eco:  yjbJ
  EcZ:  ZyjbJ
  Ecs:  ECs5028
  Sty:  STM4240
  Pae:  PA4738
  Atu:  AGc1429 AGl317 AGl331
  Sme:  SMa2071 SMb21330
  Mlo:  mll8179 mlr2098 msl9551
  Ccr:  CC0938
_______

[S] COG3238 Uncharacterized protein conserved in bacteria
  Dra:  DR1112 DR1113
  Cac:  CAC3547
  Cgl:  Cgl1047
  Lla:  L196077
  Sau:  SA0574
  Lin:  lin1173 lin1174
  Nos:  all7166 all7167
  Eco:  ydcZ
  EcZ:  Z2272
  Ecs:  ECs2051
  Sty:  STM1591 STM3549
  Pae:  PA3320 PA4815
  Pmu:  PM1890
  Atu:  AGc3733 AGc3735
  Mlo:  mll0725
_______

[I] COG3239 Fatty acid desaturase
  Mtu:  Rv3229c Rv3554_1
  MtC:  MT3326 MT3658_1
  Bsu:  BS_yocE
  Syn:  sll0262 sll1441 sll1468 sll1611 slr1350
  Nos:  all1597 all1598 alr3189 alr4009
  Pae:  PA4888 PA5102
  Rso:  RSc2025 RSp0784 RSp1029
  Sme:  SMa0130 SMb20818
  Mlo:  mll1216 mll1733 mlr3223 mlr4998 mlr7780
  Ccr:  CC3422
_______

[IR] COG3240 Phospholipase/lecithinase/hemolysin
  Nos:  all3634
  Sty:  STM0570_1 STM1631_2
  Vch:  VCA0218
  Pae:  PA4921 PA5112_1
  Pmu:  PM0076_1
  Xfa:  XF0781_1
  Rso:  RSc0580
_______

[C] COG3241 Azurin
  Pae:  PA4922
  Xfa:  XF0557
  Nme:  NMB1533
  NmA:  NMA1733
_______

[S] COG3242 Uncharacterized protein conserved in bacteria
  Eco:  yjeT
  EcZ:  ZyjeT
  Ecs:  ECs5152
  Ype:  YPO0377
  Sty:  STM4365
  Vch:  VC0351
  Pae:  PA4940
  Xfa:  XF0454
  Rso:  RSc1224
  Bme:  BMEI0612
  Mlo:  msl1453
_______

[I] COG3243 Poly(3-hydroxyalkanoate) synthetase
  Afu:  AF1123
  Mtu:  Rv1683_1
  MtC:  MT1723_1
  Mle:  ML1346_1
  Syn:  slr1830
  Vch:  VCA0688
  Pae:  PA5056 PA5058
  Rso:  RSc1631
  Atu:  AGc2954
  Sme:  SMc00296
  Mlo:  mlr0937
  Ccr:  CC1380
  Rpr:  RP738 RP820
  Rco:  RC1136 RC1137
_______

[C] COG3245 Cytochrome c5
  Vch:  VC0168
  Pae:  PA5300 PA5328 PA5491
  Nme:  NMB1677 NMB1722
  NmA:  NMA1936
  Rso:  RSc3084 RSp1367
  Ccr:  CC1218
_______

[S] COG3246 Uncharacterized conserved protein
  Afu:  AF1210
  Fnu:  FN1868
  Dra:  DR0052
  Mtu:  Rv1718
  Pae:  PA5387
  Rso:  RSc0083
  Atu:  AGpA488
  Sme:  SMa0574 SMb20275 SMc01637
  Mlo:  mll0106 mll1033 mll1845 mlr5039 mlr9032
_______

[S] COG3247 Uncharacterized conserved protein
  Mac:  MA2506 MA3134
  Mtu:  Rv1624c
  MtC:  MT1660
  Lla:  L100099
  Sau:  SA2491
  Lin:  lin0605 lin2451
  Nos:  alr4772
  Eco:  hdeD
  EcZ:  ZhdeD
  Ecs:  ECs4391
  Ype:  YPO0590
  Pae:  PA5409
  Rso:  RSp0426
  Sme:  SMa1675 SMc00032
  Bme:  BMEII0238
  Mlo:  mll6729 mll6732 mll8244 mlr2382
_______

[M] COG3248 Nucleoside-binding outer membrane protein
  Eco:  tsx
  EcZ:  Ztsx
  Ecs:  ECs0464
  Sty:  STM0413
  Vch:  VC2305
  Pae:  PA0165
_______

[S] COG3249 Uncharacterized protein conserved in bacteria
  Vch:  VC2168
  Pae:  PA0946
  Xfa:  XF0588
  Mlo:  mll8391
_______

[G] COG3250 Beta-galactosidase/beta-glucuronidase
  Sso:  SSO3036
  Tma:  TM1062 TM1193 TM1624
  Lla:  L0025
  Spy:  SPy1586
  Spn:  SP0648_2
  Bha:  BH2723
  Eco:  ebgA lacZ uidA
  EcZ:  ZebgA ZlacZ ZuidAm
  Ecs:  ECs0397 ECs2324 ECs2325 ECs3958
  Ype:  YPO1654
  Xfa:  XF0846
  Atu:  AGc2809 AGc4665
  Sme:  SMb21655 SMc04255
_______

[S] COG3251 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2377c
  MtC:  MT2445.1
  Bsu:  BS_yukJa
  EcZ:  Z0726
  Sty:  STM0587
  Pae:  PA2412
  Rso:  RSp0165 RSp0640
  Atu:  AGl2317
_______

[H] COG3252 Methenyltetrahydromethanopterin cyclohydrolase
  Afu:  AF1935
  Hbs:  VNG1686G
  Mac:  MA1710
  Mth:  MTH773
  Mja:  MJ1636
  Mka:  MK0625
_______

[S] COG3253 Uncharacterized conserved protein
  Hbs:  VNG2021C_1
  Tac:  Ta0507
  Tvo:  TVN0791
  Sso:  SSO2169
  Ape:  APE0237
  Dra:  DR1481
  Cgl:  Cgl1853
  Mtu:  Rv2676c
  MtC:  MT2750
  Mle:  ML1045
  Sau:  SA0544
  Lin:  lin2218
  Bsu:  BS_ywfI
  Bha:  BH3825
_______

[S] COG3254 Uncharacterized conserved protein
  Tac:  Ta0744
  Tvo:  TVN0446
  Lin:  lin2978
  Bsu:  BS_yulD
  Bha:  BH0806
  Eco:  yiiL
  EcZ:  ZyiiL
  Ecs:  ECs4828
  Ype:  YPO0326
  Sty:  STM4043
  Cje:  Cj0488
  Atu:  AGc5099 AGl2037 AGl2674
  Sme:  SMb21108 SMc03002
  Bme:  BMEI1711
  Mlo:  mll5702 mll7147
_______

[I] COG3255 Putative sterol carrier protein
  Afu:  AF1174 AF1534 AF1678
  Tac:  Ta0290m Ta0831
  Tvo:  TVN0395 TVN1311
  Pya:  PAE0970 PAE2932
  Sso:  SSO2507
  Ape:  APE1964
  Aae:  aq_026 aq_090
  Bha:  BH3315
  Pae:  PA1830
  Mlo:  mlr2969
  Ccr:  CC2254
_______

[P] COG3256 Nitric oxide reductase large subunit
  Pya:  PAE3603
  Sso:  SSO1571
  Syn:  sll0450
  Pae:  PA0524
  Nme:  NMB1622
  NmA:  NMA1886
  Rso:  RSp1505
  Atu:  AGl956
  Sme:  SMa1273
  Bme:  BMEII0998
_______

[R] COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization
  Dra:  DR1152
  Eco:  ylbA
  EcZ:  ZylbA
  Ecs:  ECs0577
  Sty:  STM0526
  Pae:  PA1140
  Atu:  AGl3212
  Sme:  SMb20684
  Bme:  BMEI1578
  Mlo:  mll5131
_______

[C] COG3258 Cytochrome c
  Syn:  sll1359_2
  Pae:  PA2481 PA4571_2
  Rso:  RSp1453
  Cje:  Cj0037c Cj0874c
  Bme:  BMEII0895
_______

[C] COG3259 Coenzyme F420-reducing hydrogenase, alpha subunit
  Afu:  AF1372
  Mac:  MA0975
  Mth:  MTH1134 MTH1300
  Mja:  MJ0029 MJ0727 MJ1192m
  Mka:  MK0178 MK0266 MK0537 MK0931
  Pho:  PH1294
  Pab:  PAB0641 PAB1787
  Syn:  sll1226
  Nos:  alr0766
_______

[C] COG3260 Ni,Fe-hydrogenase III small subunit
  Mac:  MA4373
  Mth:  MTH1239 MTH397
  Mja:  MJ0516 MJ1363
  Mka:  MK0464
  Tvo:  TVN1457
  Pho:  PH1434
  Pab:  PAB1396 PAB1890
  Sso:  SSO1022
  Mtu:  Rv0082
  MtC:  MT0089
  Eco:  hycG hyfI
  EcZ:  ZhycG ZhyfI
  Ecs:  ECs3351 ECs3575
  Sty:  STM2847
_______

[C] COG3261 Ni,Fe-hydrogenase III large subunit
  Mac:  MA4372_2
  Mth:  MTH1238 MTH398
  Mja:  MJ0515 MJ1027
  Mka:  MK0463
  Tvo:  TVN1456
  Pho:  PH1437
  Pab:  PAB1394_2 PAB1892
  Sso:  SSO1023
  Mtu:  Rv0087_2
  Eco:  hycE_2 hyfG_2
  EcZ:  ZhycE_2 ZhyfG_2
  Ecs:  ECs3349_2 ECs3577_2
  Sty:  STM2849_2
_______

[C] COG3262 Ni,Fe-hydrogenase III component G
  Mac:  MA4372_1
  Pho:  PH1435
  Pab:  PAB1394_1 PAB1891
  Mtu:  Rv0087_1
  Eco:  hycE_1 hyfG_1
  EcZ:  ZhycE_1 ZhyfG_1
  Ecs:  ECs3349_1 ECs3577_1
  Sty:  STM2849_1
_______

[P] COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
  Fnu:  FN1559
  Bha:  BH4038
  Eco:  ycgO
  EcZ:  Z1954
  Ecs:  ECs1686
  Sty:  STM1801
  Vch:  VC2703
  Pae:  PA5021
  Atu:  AGl2194
  Mlo:  mlr3752
_______

[M] COG3264 Small-conductance mechanosensitive channel
  Syn:  slr0510_1 slr1575_1
  Eco:  aefA yjeP
  EcZ:  ZaefA ZyjeP
  Ecs:  ECs0518 ECs5138
  Ype:  YPO0363 YPO3129
  Sty:  STM0478 STM4347
  Pae:  PA1408 PA5022
  Hin:  HI0195.1
  Pmu:  PM0358
  Rso:  RSc2451
  Atu:  AGc3014
  Sme:  SMa1582 SMc00028 SMc04176
  Bme:  BMEI0682
  Mlo:  mll1272
  Ccr:  CC3000
_______

[G] COG3265 Gluconate kinase
  Sce:  YDR248c
  Spo:  SPAC4G9.12
  Dra:  DR1910
  Cgl:  Cgl2434
  Nos:  alr3086
  Eco:  gntK idnK
  EcZ:  ZgntK
  Ecs:  ECs4286
  Ype:  YPO2540 YPO3953
  Sty:  STM3542 STM4485
  Vch:  VC0287
  Pae:  PA2321
  Pmu:  PM0792
  Nme:  NMB2028
  NmA:  NMA0412
  Rso:  RSc0441 RSp0946
  Atu:  AGc329
  Sme:  SMa0514 SMb21119
  Mlo:  mll1676
_______

[S] COG3266 Uncharacterized protein conserved in bacteria
  Eco:  damX
  EcZ:  ZdamX
  Ecs:  ECs4230
  Ype:  YPO0153
  Sty:  STM3485
  Vch:  VC2627_2 VCA0573
  Pae:  PA5037_2
_______

[U] COG3267 Type II secretory pathway, component ExeA (predicted ATPase)
  Mtu:  Rv2813
  MtC:  MT2880
  Sty:  PSLT043
  Vch:  VC0403 VC1798 VC2445_1 VC2627_1
  Pae:  PA3869 PA5037_1
_______

[S] COG3268 Uncharacterized conserved protein
  Hbs:  VNG2166Cm
  Ecu:  ECU10g1490
  Mtu:  Rv2449c Rv2953
  MtC:  MT2525 MT3027
  Mle:  ML0129
  Syn:  sll1601
  Pae:  PA4362
  Bme:  BMEII0147
_______

[R] COG3269 Predicted RNA-binding protein, contains TRAM domain
  Afu:  AF0280
  Hbs:  VNG0287a VNG1050H VNG2263G_2 VNG6090C VNG6437C VNG7069 VNG7140
  Mac:  MA0056 MA0057 MA0058 MA0059 MA0182_2 MA1288_2
  Mth:  MTH1263
  Mja:  MJ0660
  Mka:  MK1022
  Tac:  Ta0605_2
  Tvo:  TVN0655_2
  Pya:  PAE3058
_______

[S] COG3270 Uncharacterized conserved protein
  Afu:  AF0854
  Pho:  PH1240
  Pab:  PAB0673
  Spy:  SPy1246_2
  Spn:  SP1402_2
  Eco:  yebU_2
  EcZ:  ZyebU_2
  Ecs:  ECs2545_2
  Sty:  STM1850_2
  Vch:  VC1502_2
_______

[R] COG3271 Predicted double-glycine peptidase
  Mac:  MA2198
  Mth:  MTH1330 MTH1332 MTH1463 MTH1651 MTH1653 MTH96 MTH97
  Pae:  PA1762 PA1953
  Nme:  NMB0103 NMB0582 NMB0855
  NmA:  NMA0173 NMA0767 NMA1066
  Rso:  RSc0445
  Cje:  Cj0058
_______

[S] COG3272 Uncharacterized conserved protein
  Mac:  MA4104_2
  Mth:  MTH903_2
  Eco:  ybgA
  EcZ:  ZybgA
  Ecs:  ECs0732
  Ype:  YPO2694
  Sty:  STM1389_2
  Vch:  VCA0055_2
  Pae:  PA4658_2
_______

[S] COG3273 Uncharacterized conserved protein
  Afu:  AF2197
  Hbs:  VNG2104G
  Mac:  MA1435
  Mth:  MTH1402
  Mka:  MK0884
  Pho:  PH0235 PH0236
  Pab:  PAB2207 PAB2401
  Ape:  APE1999
_______

[S] COG3274 Uncharacterized protein conserved in bacteria
  Lla:  L79351
  Eco:  yiaH
  EcZ:  ZyiaH
  Ecs:  ECs4444
  Ype:  YPO2592 YPO4045
  Sty:  STM3658
  Vch:  VCA0023
  Rso:  RSc3292
  Rpr:  RP338
_______

[T] COG3275 Putative regulator of cell autolysis
  Fnu:  FN0220
  Sau:  SA0250
  Bsu:  BS_lytS
  Eco:  yehU ypdA
  EcZ:  Z3645 ZyehU
  Ecs:  ECs2937 ECs3260
  Ype:  YPO3943
  Sty:  STM2159
  Vch:  VC0694
  Sme:  SMb21546
_______

[J] COG3276 Selenocysteine-specific translation elongation factor
  Mac:  MA4654
  Mja:  MJ0325 MJ0495
  Mka:  MK0148
  Tac:  Ta1237
  Tvo:  TVN0359
  Sso:  SSO0470
  Aae:  aq_1033
  Eco:  selB
  EcZ:  ZselB
  Ecs:  ECs4467
  Sty:  STM3682
  Pae:  PA4807
  Hin:  HI0709
  Pmu:  PM1766
  Cje:  Cj1379
  Sme:  SMa0015
_______

[J] COG3277 RNA-binding protein involved in rRNA processing
  Afu:  AF1298a
  Hbs:  VNG1366H
  Mac:  MA0609
  Mth:  MTH886
  Mja:  MJ0782.1
  Mka:  MK0859
  Tac:  Ta0940a
  Tvo:  TVN1084
  Pho:  PH1745a
  Pab:  PAB3084
  Pya:  PAE3330
  Ape:  APE0786
  Sce:  YHR089c
  Spo:  SPBC20F10.01
  Ecu:  ECU01g1360
_______

[O] COG3278 Cbb3-type cytochrome oxidase, subunit 1
  Vch:  VC1442
  Pae:  PA1554 PA1557 PA1856 PA4133
  Nme:  NMB1725
  NmA:  NMA1980
  Rso:  RSc1276 RSp0993
  Hpy:  HP0144
  jHp:  jhp0132
  Cje:  Cj1490c
  Atu:  AGc2835
  Sme:  SMa0612 SMa0765 SMa1220
  Bme:  BMEI1564
  Mlo:  mll6630 mlr6411
  Ccr:  CC1401
_______

[KT] COG3279 Response regulator of the LytR/AlgR family
  Fnu:  FN0219
  Cac:  CAC0081 CAC1581 CAC1670
  Lla:  L121252
  Spy:  SPy0245
  Spn:  SP0161 SP0525 SP0526 SP1915 SP2235
  Sau:  SA0251 SA1844 SA2153
  Lin:  lin0044 lin0801 lin0983
  Bsu:  BS_lytT BS_yccH
  Bha:  BH3894_2
  Eco:  yehT ypdB
  EcZ:  Z3646 ZyehT
  Ecs:  ECs2936 ECs3261
  Ype:  YPO3287
  Sty:  STM2158
  Vch:  VC0693 VCA0850
  Pae:  PA5261
  Xfa:  XF1626
  Rso:  RSc1352
  Atu:  AGc3954
  Sme:  SMb21545
  Bme:  BMEI0523
  Mlo:  mll0891_2
  Ccr:  CC0295_2 CC0330 CC0551 CC1610 CC3036
_______

[G] COG3280 Maltooligosyl trehalose synthase
  Sso:  SSO2095
  Dra:  DR0463
  Cgl:  Cgl2066
  Mtu:  Rv1563c
  MtC:  MT1614
  Nos:  all0167
  Sty:  STM1559
  Pae:  PA2162
  Rso:  RSp0235
  Sme:  SMb20574
_______

[G] COG3281 Uncharacterized protein, probably involved in trehalose biosynthesis
  Ape:  APE2310
  Cgl:  Cgl2251
  Mtu:  Rv0127
  MtC:  MT0135
  Pae:  PA2152_2
  Rso:  RSp0240_2
_______

[KE] COG3283 Transcriptional regulator of aromatic amino acids metabolism
  Eco:  tyrR
  EcZ:  ZtyrR
  Ecs:  ECs1902
  Ype:  YPO2344
  Sty:  STM1683
  Vch:  VC1308
  Pae:  PA0873 PA2449
  Hin:  HI0410
  Pmu:  PM0908
_______

[QK] COG3284 Transcriptional activator of acetoin/glycerol metabolism
  Cac:  CAC3319_1
  Bsu:  BS_acoR
  Bha:  BH1826
  Nos:  alr3385
  Eco:  ycgU
  Vch:  VC1817
  Pae:  PA4021 PA4147
  Rso:  RSc3129
  Atu:  AGc4043 AGl278
  Sme:  SMb20102 SMc02690
  Bme:  BMEI1748
  Mlo:  mll6640
  Ccr:  CC3579
_______

[L] COG3285 Predicted eukaryotic-type DNA primase
  Mtu:  Rv0269c Rv0938_1 Rv3730c
  MtC:  MT0965_1 MT0282 MT3835
  Bsu:  BS_ykoU_2
  Bha:  BH2209_2
  Pae:  PA2138_2
  Atu:  AGl502_2 AGpA74_2
  Sme:  SMa0417_2 SMb20685_2 SMb21044_2 SMc03959_2
  Mlo:  mll2077_2 mll4606_2 mll9625_2
_______

[S] COG3286 Uncharacterized protein conserved in archaea
  Mja:  MJ0388
  Mka:  MK0059
  Pho:  PH0042
  Pab:  PAB2315
  Pya:  PAE1976
  Ape:  APE0444
_______

[S] COG3287 Uncharacterized conserved protein
  Mja:  MJ1623_1
  Mka:  MK0780 MK0793 MK1166
  Nos:  alr4881
  Vch:  VC0130_1 VC1444
  Pae:  PA1975
  Sme:  SMb20163
  Mlo:  mlr1131
_______

[C] COG3288 NAD/NADP transhydrogenase alpha subunit
  Mtu:  Rv0155 Rv0156
  Mle:  ML2635 ML2636
  Syn:  slr1239
  Nos:  all3410 asl3409
  Eco:  pntA
  EcZ:  ZpntA
  Ecs:  ECs2309
  Ype:  YPO2303
  Sty:  STM1479
  Vch:  VCA0563
  Pae:  PA0195 PA0195a
  Hin:  HI1362
  Pmu:  PM0753
  Nme:  NMB0980
  NmA:  NMA1177
  Rso:  RSc2730 RSc2732 RSp0949 RSp0950
  Atu:  AGc4529
  Sme:  SMc03939 SMc03950
  Bme:  BMEII0323 BMEII0324
  Mlo:  mlr5181 mlr5183
  Ccr:  CC3304 CC3305
  Rpr:  RP862 RP863
  Rco:  RC1333 RC1334
_______

[T] COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism
  Cgl:  Cgl0068
  Spy:  SPy1107
  Bsu:  BS_citS BS_yccG BS_ydbF BS_yufL
  Bha:  BH0397 BH2752 BH3839
  Eco:  citA dcuS
  EcZ:  ZcitA ZyjdH
  Ecs:  ECs0658 ECs5107
  Sty:  STM0053 STM0625 STM4304
  Vch:  VC0791 VC1605
_______

[R] COG3291 FOG: PKD repeat
  Afu:  AF1398_1
  Mac:  MA0336_2 MA0488_2 MA0850_2 MA0850_4 MA0851 MA1195 MA1292
        MA1293_2 MA1420_2 MA1510_3 MA1513_2 MA1730_2 MA1738_2 MA1753
        MA1754 MA1756 MA1761 MA1762_1 MA1762_3 MA1762_5 MA1764
        MA1766 MA1767 MA1838_2 MA1838_4 MA1904_2 MA1904_4 MA2284_2
        MA2335 MA2507_2 MA2706_2 MA2707 MA2793 MA2886 MA2926_3
        MA3001 MA3229 MA3430_2 MA3698_1 MA3698_3 MA3698_5 MA3699_1
        MA3699_3 MA3700 MA3842_2 MA4034_2 MA4284_2 MA4284_4 MA4285_2
        MA4287_2 MA4287_4 MA4287_6 MA4289 MA4291_3 MA4291_6 MA4292
        MA4297_2 MA4297_4 MA4299_1 MA4299_3 MA4301_2 MA4301_4 MA4305_2
        MA4305_4 MA4305_7 MA4307 MA4309_2 MA4309_4 MA4312_1 MA4312_3
        MA4312_6 MA4315_2 MA4315_4 MA4588 MA4589_1 MA4589_3
  Mth:  MTH716_3 MTH75_2 MTH87_2 MTH995
  Mja:  MJ1468
  Pho:  PH0954_3
  Ape:  APE0304_1
  Lla:  L121794
  Bha:  BH0785_2
  Vch:  VCA0223_2
_______

[T] COG3292 Predicted periplasmic ligand-binding sensor domain
  Syn:  sll0241
  Nos:  all1523
  Vch:  VC1353_1 VC2080_1
  Xfa:  XF1330_1
_______

[L] COG3293 Transposase and inactivated derivatives
  Mac:  MA0437 MA0831 MA1044 MA1637 MA2565 MA2835 MA3575
        MA4062
  Dra:  DR1296 DRC0033
  Cgl:  Cgl1838
  Mtu:  Rv1041c Rv1042c Rv1149 Rv1150
  Spn:  SP0538 SP0941 SP1086 SP1195 SP1928 SP2079 SP2138
  Syn:  sll0012 sll0161 sll0665 sll0666 sll0677 sll1710 sll1716
        sll1791 sll1792 sll1860 sll1861 slr0166 slr0265 slr0350
        slr0511 slr0703 slr0799 slr0800 slr1246 ssl0296 ssl1920
        ssl1922 ssr0256 ssr2078 ssr2227 ssr2699 ssr2898
  Nos:  all0015 all0016 all2692 all2693 all4399 all4400 all4816
        all4817 all7002 alr3610 alr3611 alr4438 alr4439 alr5157
        alr5158 alr7025
  Rso:  RSc0208 RSc0893 RSc1009 RSc1672 RSc3199 RSc3221 RSc3351
        RSp0041 RSp0094 RSp0102 RSp0127 RSp0302 RSp0581 RSp0588
        RSp0990 RSp1302 RSp1332
  Atu:  AGl3590
  Bme:  BMEI1001 BMEI1002 BMEI1052 BMEI1053 BMEI1163 BMEI1164 BMEI1398
        BMEI1399 BMEI1400 BMEI1402 BMEI1403 BMEI1405 BMEI1406 BMEI1407
        BMEI1410 BMEI1411 BMEI1412 BMEI1421 BMEI1424 BMEI1814 BMEI1815
        BMEII0445 BMEII0710 BMEII0716 BMEII0718 BMEII0719
  Mlo:  mll2531 mll5948 mll5949 mll6128 mll8100 mll9502 mll9503
        mll9597 mlr1955 mlr5968 mlr6030 mlr6031 mlr6034 mlr6706
        mlr6707 mlr6961 mlr6962 mlr8224 mlr9059 mlr9060 mlr9643
        mlr9644 msl9596 msr1956 msr6074 msr8681 msr9767
  Ccr:  CC0928 CC0929 CC1206 CC1236 CC1291 CC1292 CC2043
        CC2592 CC3332 CC3333 CC3594 CC3595
_______

[S] COG3294 Uncharacterized conserved protein
  Hbs:  VNG0804C
  Mja:  MJ1020
  Pya:  PAE2323
  Ape:  APE1666
  Dra:  DR1443
_______

[S] COG3295 Uncharacterized protein conserved in bacteria
  Dra:  DR1792
  Vch:  VC0283
  Xfa:  XF0597
  Rso:  RSc3067
  Ccr:  CC3059
_______

[S] COG3296 Uncharacterized protein conserved in bacteria
  Dra:  DR0138
  Sau:  SA2096
  Syn:  slr0686
  Nos:  all3579
  Pae:  PA5333
_______

[U] COG3297 Type II secretory pathway, component PulL
  Eco:  gspL yghE
  Ype:  YPO0808
  Vch:  VC2725
  Pae:  PA3096
  Ccr:  CC0181
_______

[L] COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
  Nme:  NMB1417
  NmA:  NMA1628
  Hpy:  HP0688 HP0689
  jHp:  jhp0628
  Cje:  Cj1132c
_______

[S] COG3299 Uncharacterized homolog of phage Mu protein gp47
  Lin:  lin1287 lin1710
  Bsu:  BS_xkdT BS_yqbT
  Eco:  ymfP
  Ecs:  ECs4987
  Ype:  YPO1250
  Hin:  HI1520
  Xfa:  XF1598 XF1704
  NmA:  NMA1323 NMA1826 NMA1827
_______

[T] COG3300 MHYT domain (predicted integral membrane sensor domain)
  Bsu:  BS_ykoWm_1
  Syn:  slr2098_1
  Sty:  STM3388_1
  Pae:  PA1727_1 PA3311_1
  Rso:  RSc0510_1
  Atu:  AGc4046_1 AGl511_1
  Sme:  SMb20900_1
  Mlo:  mll4364_1 mlr3504_1
  Ccr:  CC0091_1
_______

[P] COG3301 Formate-dependent nitrite reductase, membrane component
  Afu:  AF2386
  Pya:  PAE2836 PAE2861
  Sso:  SSO2797
  Eco:  nrfD
  EcZ:  ZnrfD
  Ecs:  ECs5055
  Sty:  STM4280
  Hin:  HI1066
  Pmu:  PM0026
_______

[R] COG3302 DMSO reductase anchor subunit
  Aae:  aq_1231
  Eco:  dmsC ynfH
  EcZ:  Z2579 Z3783 ZdmsC
  Ecs:  ECs0981 ECs2296 ECs3382
  Ype:  YPO2967 YPO3323
  Sty:  STM0613 STM0966 STM1496 STM2528 STM4307
  Hin:  HI1045
  Pmu:  PM1756
  Mlo:  mll5612
_______

[P] COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit
  Eco:  nrfA
  EcZ:  ZnrfA
  Ecs:  ECs5052
  Sty:  STM4277
  Hin:  HI1069
  Pmu:  PM0023
  Cje:  Cj1357c
_______

[S] COG3304 Predicted membrane protein
  Cgl:  Cgl0825
  Mtu:  Rv0870c
  MtC:  MT0892.1
  Eco:  yccF
  EcZ:  ZyccF
  Ecs:  ECs1045
  Ype:  YPO1439
  Sty:  STM1074
  Vch:  VCA1051
  Pmu:  PM0393
  Ccr:  CC2111
_______

[S] COG3305 Predicted membrane protein
  Mtu:  Rv0090
  MtC:  MT0099
  Vch:  VC1575
  Xfa:  XF1214
_______

[M] COG3306 Glycosyltransferase involved in LPS biosynthesis
  Ype:  YPO1382
  Hin:  HI0550 HI0765 HI1697
  Pmu:  PM0509 PM1141 PM1143
  Nme:  NMB1926 NMB1928
  NmA:  NMA0525 NMA0527
  Hpy:  HP0805 HP0826
  jHp:  jhp0562 jhp0563 jhp0741 jhp0765
  Atu:  AGc3310 AGc3727
  Bme:  BMEI0418 BMEI1326 BMEI1602
  Mlo:  mll0582_3 mll5323
  Rco:  RC1060
_______

[M] COG3307 Lipid A core - O-antigen ligase and related enzymes
  Tma:  TM0806_1
  Fnu:  FN1238
  Cac:  CAC2318
  Spn:  SP1893
  Sau:  SA0153
  Syn:  slr0728 slr1515
  Nos:  all4428 all5073 alr3060 alr3690
  Eco:  rfaL
  EcZ:  ZwaaL
  Ecs:  ECs4500
  Ype:  YPO0417
  Sty:  STM3713
  Vch:  VC0237 VC0393 VC0931
  Pae:  PA4999
  Hin:  HI0874
  Pmu:  PM1862 PM1863
  Xfa:  XF0103 XF1995
  Nme:  NMB0596
  NmA:  NMA0800
  Rso:  RSc0559 RSc2204
  Hpy:  HP1039
  jHp:  jhp0385
  Atu:  AGc4277 AGc854 AGl2994
  Sme:  SMb20944 SMb21505
  Bme:  BMEII1127
  Mlo:  mll6499 mll7573 mlr5249
  Ccr:  CC0165 CC0499 CC2301 CC2429
  Rpr:  RP358
  Rco:  RC0486
_______

[S] COG3308 Predicted membrane protein
  Vch:  VC2167
  Pae:  PA0948
  Nme:  NMB0597
  NmA:  NMA0801
  Rso:  RSc1557
_______

[S] COG3309 Uncharacterized virulence-associated protein D
  Hin:  HI0450
  Xfa:  XFa0052
  Nme:  NMB1753
  Hpy:  HP0315 HP0967
  jHp:  jhp0829
_______

[S] COG3310 Uncharacterized protein conserved in bacteria
  Vch:  VC1619
  Xfa:  XF1204
  Nme:  NMB0572
  NmA:  NMA0755
  Rso:  RSc3054
_______

[K] COG3311 Predicted transcriptional regulator
  Eco:  alpA
  EcZ:  Z0336 Z1124 Z1188 Z1563 Z1627 Z3946
  Ecs:  ECs0299 ECs1302 ECs1575 ECs3513
  Ype:  YPO0878 YPO1904 YPO2823
  Sty:  STM2744
  Vch:  VC0497 VC1785 VC1809
  Xfa:  XF1786
  Rso:  RSc0962 RSc1897
  Sme:  SMc02201
  Bme:  BMEI1700
  Mlo:  mll0486 msr5461
_______

[C] COG3312 F0F1-type ATP synthase, subunit I
  Eco:  atpI
  EcZ:  ZatpI
  Ecs:  ECs4681
  Ype:  YPO4128
  Sty:  STM3872
  Vch:  VC2771
  Pae:  PA5561
  Hin:  HI0485.1
  Pmu:  PM1487
  Nme:  NMB1941
  NmA:  NMA0512
_______

[R] COG3313 Predicted Fe-S protein
  Eco:  ydhL
  EcZ:  Z2665
  Ecs:  ECs2358
  Ype:  YPO2376
  Sty:  STM1438
  Vch:  VC1662 VCA0314 VCA0426
  Pae:  PA1788 PA3752
  Rso:  RSc0259 RSc1457
  Sme:  SMc04216
  Bme:  BMEI1101
  Mlo:  mlr0564
  Ccr:  CC1308
_______

[S] COG3314 Uncharacterized protein conserved in bacteria
  Fnu:  FN0340 FN1402
  Cac:  CAC1740
  Sau:  SA0308 SA1976
  Bsu:  BS_ylbJ
  Bha:  BH2250 BH2588 BH3947
  Eco:  yjiH
  EcZ:  ZyjiH
  Ecs:  ECs5288
  Sty:  STM4514
  Vch:  VCA0076 VCA1013
  Sme:  SMc00668
_______

[Q] COG3315 O-Methyltransferase involved in polyketide biosynthesis
  Mac:  MA0170 MA2468 MA2745 MA2760 MA2763 MA2765 MA2903
        MA2904 MA2952 MA3424 MA3472
  Fnu:  FN0388 FN0984
  Mtu:  Rv0145 Rv0146 Rv0281 Rv0725c Rv0726c Rv0731c Rv0830
        Rv0893c Rv1153c Rv1729c Rv1889c Rv1896c Rv2751 Rv3399
        Rv3767c Rv3787c
  MtC:  MT0153 MT0154 MT0293 MT0751 MT0756 MT0851 MT0917
        MT1187 MT1770 MT1937 MT1947 MT3507 MT3874 MT3895
  Mle:  ML2020 ML2640
  Bsu:  BS_yktD
  Nos:  all7332 alr2154
  Vch:  VC0091
  Pae:  PA1860 PA4009
  Pmu:  PM1322
  Sme:  SMa1963
  Mlo:  mll3178 mlr0915
_______

[L] COG3316 Transposase and inactivated derivatives
  Afu:  AF0138 AF0895
  Hbs:  VNG6292C VNG6430C
  Mja:  MJ0017 MJ0139.1 MJ1466
  Aae:  aq_aa24
  Cgl:  Cgl0933 Cgl1520 Cgl2454 Cgl2456 Cgl2916
  Sau:  SA0026 SA0034
  Lin:  pli0012 pli0020 pli0024 pli0028 pli0032 pli0042 pli0043
        pli0049 pli0063 pli0071
  Ype:  YPCD1.10c
  Xfa:  XF2303
  Bme:  BMEI0200
  Mlo:  mll6352 mll6353 mll6359 mll6362 mll9055 mll9070 mlr6301
        msl6314
  Ccr:  CC2739
_______

[M] COG3317 Uncharacterized lipoprotein
  Eco:  nlpB
  EcZ:  ZnlpB
  Ecs:  ECs3339
  Ype:  YPO3061
  Sty:  STM2488
  Vch:  VC2156
  Pae:  PA1011
  Hin:  HI0256
  Pmu:  PM1050
  Nme:  NMB0928
  NmA:  NMA1123
  Rso:  RSc1146
_______

[R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA
  Bsu:  BS_yccF
  Eco:  yecA
  EcZ:  ZyecA
  Ecs:  ECs2616
  Sty:  STM1938
  Vch:  VC1106 VC1832
  Pae:  PA1440
  Nme:  NMB1071
  NmA:  NMA1272
  Ctr:  CT141
  Cpn:  CPn0260
_______

[Q] COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases
  Cgl:  Cgl2811_2
  Mtu:  Rv3800c_2
  MtC:  MT3907_2
  Mle:  ML0101_2
  Bsu:  BS_pksR_3 BS_ppsE_2 BS_srfAC_2 BS_yukL_2
  Nos:  all1695_2
  Eco:  entF_2
  EcZ:  ZentF_2
  Ecs:  ECs0625_2
  Ype:  YPO1910_3
  Sty:  STM0588_2
  Pae:  PA2399_3 PA3327_3
  Rso:  RSc1811_2 RSp0642_6 RSp1419_2 RSp1422_2
  Bme:  BMEII0989
  Mlo:  mll6746_2 mll6752_2 mll9722_2
_______

[Q] COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes
  Sce:  YBR115c_2
  Spo:  SPAP7G5.04c_2 SPCC162.02c_2
  Mtu:  Rv0101_4 Rv2590_2 Rv3391_1
  MtC:  MT0110_4 MT2667_2 MT3498_1
  Mle:  ML0484_2
  Sau:  SA0173_3
  Nos:  all2641_2 alr5357_2
  Pae:  PA4078_2
  Atu:  AGl2323_2
_______

[Q] COG3321 Polyketide synthase modules and related proteins
  Cac:  CAC3355
  Cgl:  Cgl2811_1
  Mtu:  Rv0405_1 Rv1180 Rv1181 Rv1527c Rv1661 Rv1662 Rv1663
        Rv1664 Rv2048c_1 Rv2048c_2 Rv2381c Rv2382c Rv2931 Rv2932
        Rv2933 Rv2934 Rv2935_1 Rv2940c Rv2946c Rv2947c Rv3800c_1
        Rv3825c
  MtC:  MT0418_1 MT1218 MT1701 MT1702 MT1703 MT1704 MT2108_1
        MT2108_2 MT2449 MT2450 MT3000 MT3002 MT3003 MT3004
        MT3005_1 MT3010 MT3018 MT3021.1 MT3907_1 MT3933
  Mle:  ML0101_1 ML0135 ML0139 ML1229 ML2353_1 ML2354 ML2355
        ML2356 ML2357
  Bsu:  BS_pksD BS_pksK_2 BS_pksK_3 BS_pksK_4 BS_pksL_1 BS_pksL_2 BS_pksL_3
        BS_pksL_4 BS_pksM_1 BS_pksM_2 BS_pksM_3 BS_pksP_2 BS_pksP_3 BS_pksP_4
        BS_pksR_1 BS_pksR_2
  Nos:  all1643_1 all1644 all1646 all1648_1 all1649 all2635 all2646
        alr2679 alr2680 alr5351 alr5353 alr5354 alr5355
  Ype:  YPO1910_1
  Rso:  RSc1806_2 RSc1810_1 RSp0641_2
  Atu:  AGl2313 AGl2329
  Sme:  SMc02273
  Mlo:  mlr9053_1
_______

[T] COG3322 Predicted periplasmic ligand-binding sensor domain
  Afu:  AF1721_1
  Mac:  MA1739_1 MA2348_1 MA2553_1 MA2555_1 MA4377_1
  Ype:  YPO0998_1
  Vch:  VC2285_1
  Pae:  PA0847_1 PA2072_1
  Sme:  SMa0137_1
  Ccr:  CC0857_1
_______

[S] COG3323 Uncharacterized protein conserved in bacteria
  Fnu:  FN1791_2
  Cac:  CAC0464
  Cgl:  Cgl2188_2
  Mtu:  Rv2230c_2
  Mle:  ML1639_2
  Sau:  SA1388_2
  Lin:  lin1489_2
  Bsu:  BS_yqfO_2
  Bha:  BH1380_2 BH2593
  Pae:  PA3762
_______

[R] COG3324 Predicted enzyme related to lactoylglutathione lyase
  Mac:  MA2011 MA4669
  Cgl:  Cgl0148
  Mtu:  Rv0577 Rv0911
  MtC:  MT0606 MT0934.1
  Bha:  BH0304
  Sty:  STM0409
  Vch:  VCA0338 VCA0415 VCA0645
  Pae:  PA1672
  Pmu:  PM0279
  Rso:  RSc2671
  Atu:  AGc1564 AGc2825
  Sme:  SMc04054 SMc04266
  Bme:  BMEI1437 BMEII0784
  Mlo:  mll7529 mlr1649
  Ccr:  CC1834 CC3424
_______

[G] COG3325 Chitinase
  Hbs:  VNG0816G_2 VNG0818C_2
  Sce:  YDR371w
  Lin:  lin0153_1
  Bha:  BH0916_1
  Sty:  STM0018_1
  Vch:  VC1073_2 VCA0027_1 VCA0700_2
_______

[S] COG3326 Predicted membrane protein
  Mac:  MA2252
  Lla:  L4152
  Spy:  SPy1367
  Spn:  SP1256
  Lin:  lin0836
  Bsu:  BS_ysdA
  Bha:  BH3136
  Sty:  STM1632
  Pae:  PA1960_2
  Nme:  NMB1917_1
  NmA:  NMA0537_1
  Hpy:  HP0342
  Atu:  AGc2437
_______

[K] COG3327 Phenylacetic acid-responsive transcriptional repressor
  Sso:  SSO1315 SSO2022
  Mtu:  Rv0674
  MtC:  MT0703
  Bha:  BH0194
  Eco:  paaX
  Sme:  SMb21641
_______

[L] COG3328 Transposase and inactivated derivatives
  Mac:  MA4670
  Tac:  Ta0189 Ta0697 Ta0711
  Tvo:  TVN0870 TVN1468
  Sso:  SSO11281 SSO1164 SSO1286 SSO1414 SSO1648 SSO1650 SSO1679
        SSO1980 SSO2842
  Cac:  CAC0248
  Mtu:  Rv0920c Rv1047 Rv1199c Rv2512c Rv2666 Rv3023c Rv3115
        Rv3431c Rv3640c
  MtC:  MT0947 MT1076 MT1237 MT2587 MT3107 MT3197 MT3537
        MT3742
  Lla:  L24515
  Bha:  BH0311 BH0356 BH0387 BH0690 BH0915 BH2093 BH2965
        BH3458 BH3664
  Syn:  ssl1277
  EcZ:  Z1827 Z2078 Z2082 Z6017 Z6019
  Ecs:  ECs0849 ECs1816 ECs1817 ECs2221 ECs2225
  Ype:  YPCD1.25 YPCD1.66 YPMT1.80c YPO0011 YPO1493 YPO1561 YPO1583
        YPO1589 YPO1621 YPO1727 YPO1988 YPO2104 YPO2136 YPO2170
        YPO2194 YPO2447 YPO2571 YPO2656 YPO2783 YPO2799 YPO2862
        YPO2942 YPO3875
  Sty:  STM1860
  Rso:  RSc0252 RSp0478
  Sme:  SMa0384 SMa0461 SMa0673 SMa0976 SMa0995 SMa0997 SMa0998
        SMa1356 SMa1878 SMb20060 SMc00285 SMc01240 SMc01530 SMc01612
        SMc02839 SMc02840 SMc02937 SMc03113 SMc03114 SMc03115 SMc03982
        SMc04195
  Mlo:  mll6110 mll6151 mlr6278
  Uur:  UU404
_______

[R] COG3329 Predicted permease
  Mtu:  Rv2387
  MtC:  MT2456
  Bha:  BH3869
  Syn:  slr1512
  Nos:  alr0986 all2134
  Ccr:  CC3509
_______

[S] COG3330 Uncharacterized protein conserved in bacteria
  Tma:  TM1439
  Cac:  CAC2415
  Bha:  BH1414
  Syn:  sll0185
  Nos:  all2705 all3054_3
_______

[R] COG3331 Penicillin-binding protein-related factor A, putative recombinase
  Lla:  L131245
  Spy:  SPy1648
  Spn:  SP0370
  Sau:  SA1282
  Lin:  lin2005
  Bsu:  BS_yotM BS_yppB
  Bha:  BH1703 BH3539
  Uur:  UU297
  Mpu:  MYPU_0860
  Mpn:  MPN528a
  Mge:  MG352
_______

[S] COG3332 Uncharacterized conserved protein
  Sce:  YGR127w
  Bha:  BH1727
  Pae:  PA0339
  Rso:  RSc1780
_______

[S] COG3333 Uncharacterized protein conserved in bacteria
  Fnu:  FN2105
  Cgl:  Cgl2762
  Bha:  BH2009
  Sty:  STM2788
  Vch:  VC1332
  Pae:  PA0752 PA2207
  Pmu:  PM1681
  Rso:  RSc0793
  Atu:  AGc184 AGc4485 AGpA475
  Sme:  SMb20027 SMb20726 SMb20769 SMc00500
_______

[S] COG3334 Uncharacterized conserved protein
  Aae:  aq_1680
  Bsu:  BS_ylxF
  Bha:  BH2453
  Hpy:  HP0257
  jHp:  jhp0241
  Cje:  Cj1496c
  Atu:  AGc968
  Sme:  SMc03033
  Bme:  BMEII1083
  Mlo:  mlr2920
  Ccr:  CC2059
_______

[L] COG3335 Transposase and inactivated derivatives
  Afu:  AF0679 AF1352 AF2139
  Mac:  MA0836 MA0839 MA2937 MA3762
  Tvo:  TVN1411_1 TVN1411_2
  Sso:  SSO0041 SSO1200_2 SSO1238_2 SSO1263 SSO1363 SSO1385 SSO1490
        SSO1554 SSO1695_2 SSO1706 SSO1717 SSO1749 SSO1751 SSO1793
        SSO1897_2 SSO2007 SSO2090_2 SSO2132_2 SSO2925 SSO2931 SSO2947
        SSO2958 SSO2993 SSO7399 SSO8276 SSO8278 SSO9241
  Dra:  DR0255 DR2425 DRB0056_2 DRB0120m_2
  Cgl:  Cgl2496
  Spn:  SP0015 SP0016 SP0299 SP0300 SP0344 SP0811 SP0819
        SP1148 SP1149 SP1496 SP2014 SP2015
  Bha:  BH2520
  Syn:  sll0200 sll0201 sll0431 sll0650 sll0651 sll0699 sll0700
        sll0808 sll1094 sll1256 sll1257 sll1397 sll1436 sll1437
        sll1930 sll1983 sll1984 sll1998 slr0230 slr0352 slr0704
        slr0856 slr0857 slr1075 slr1282 slr1283 slr1357 slr1524
        slr1585 slr1586 slr1715 slr1716 slr1936 slr1937 slr2112
        slr2113 smr0002 ssl0426 ssl0769 ssl1507 ssr1175 ssr1176
  Nos:  all0362 all1971 all2066 all2232 all4867 all7563 all7564
        alr0019 alr0553 alr1727 alr1854 alr1859 alr1926 alr2774
        alr4628_2 alr5228 asl1992 asr3082
  EcZ:  Z2561 Z2562 Z2563 Z4330
  Ecs:  ECs1826 ECs1827 ECs3859
  Sty:  PSLT042
  NmA:  NMA1601a NMA2184
  Rso:  RSc0103 RSc0110 RSc0637 RSc2176 RSc3393 RSp0217 RSp0450
        RSp0453 RSp1152 RSp1336 RSp1675
  Sme:  SMa0020 SMa1799 SMa2045 SMa2375 SMb20304 SMb20778 SMb21046
        SMb21702 SMb21711 SMc00934 SMc01338 SMc02289 SMc02399 SMc03089
        SMc03312
  Mlo:  mll6146 mll6379 mll8754 mll9021 mll9289
_______

[S] COG3336 Predicted membrane protein
  Dra:  DR1887
  Cgl:  Cgl2402
  Mtu:  Rv0102
  MtC:  MT0111
  Mle:  ML1998
  Bsu:  BS_ctaG
  Bha:  BH0892 BH2905
  Sme:  SMb21366
  Mlo:  mll9629
_______

[L] COG3337 Uncharacterized protein predicted to be involved in DNA repair
  Afu:  AF1862
  Aae:  aq_384
  Bha:  BH0331
_______

[P] COG3338 Carbonic anhydrase
  Lin:  lin0807
  Bha:  BH0360
  Nos:  all2929
  Vch:  VCA0274
  Pmu:  PM1905
  Hpy:  HP1186
  jHp:  jhp1112
  Sme:  SMa0045
  Mlo:  mll6384
_______

[S] COG3339 Uncharacterized conserved protein
  Mac:  MA0772
  Mth:  MTH308 MTH471
  Cac:  CAC1011
  Bsu:  BS_ykvA
  Bha:  BH0462
  Syn:  sll0846
  Nos:  all0641
  Rso:  RSc2183
  Atu:  AGc4850
  Sme:  SMb20260 SMc03833
  Bme:  BMEI1865
  Mlo:  mlr4351
  Ccr:  CC0123
_______

[E] COG3340 Peptidase E
  Fnu:  FN1116
  Dra:  DR1070
  Cgl:  Cgl0458
  Lin:  lin0382
  Bsu:  BS_ygaJ
  Bha:  BH0697
  Nos:  alr7184
  Eco:  pepE
  EcZ:  ZpepE
  Ecs:  ECs4939
  Sty:  STM4190
  Hin:  HI0587
  Pmu:  PM0454 PM1590
_______

[R] COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein
  Sce:  YMR234w_1
  Spo:  SPBC336.06c_1
  Tma:  TM1296
  Cac:  CAC1856 CAC2551
  Bha:  BH0863
_______

[S] COG3342 Uncharacterized conserved protein
  Hbs:  VNG1422H VNG2644a
  Pya:  PAE3380
  Sso:  SSO1350 SSO1945 SSO1947
  Ape:  APE1388
  Bha:  BH2194
  Pae:  PA5391
_______

[K] COG3343 DNA-directed RNA polymerase, delta subunit
  Lla:  L0141
  Spy:  SPy1895
  Spn:  SP0493
  Sau:  SA1930
  Lin:  lin2705
  Bsu:  BS_rpoE
  Bha:  BH3793
  Uur:  UU597
  Mpn:  MPN024
  Mge:  MG022
_______

[L] COG3344 Retron-type reverse transcriptase
  Mac:  MA2102 MA2681 MA2797 MA2799 MA3645 MA4183 MA4184
        MA4185 MA4228 MA4626 MA4628
  Sce:  Q0050 Q0055
  Fnu:  FN0161
  Cac:  CAC3514
  Mtu:  Rv0071
  MtC:  MT0077
  Sau:  SA2010
  Bha:  BH0039 BH0099 BH0224 BH0533 BH0611
  Syn:  sll0371 sll1503
  Nos:  all2961 all5014 all5206_1 alr1468_1 alr3497 alr7240 alr7241_1
        alr7242_1 alr7308_1 alr8560_1 asl5015
  Eco:  ykfC
  Ype:  YPMT1.75c
  Sty:  STM3846
  Vch:  VC2385
  Pae:  PA0715
  Sme:  SMa1801 SMa1875 SMb20780 SMb21045 SMb21167 SMb21477
_______

[G] COG3345 Alpha-galactosidase
  Tma:  TM1192
  Spn:  SP1898
  Bha:  BH2223
  Ype:  YPO1581
  Vch:  VC1690
_______

[S] COG3346 Uncharacterized conserved protein
  Sce:  YGR112w
  Spo:  SPBC1215.01
  Cgl:  Cgl2191
  Mtu:  Rv2235
  MtC:  MT2294
  Mle:  ML1644
  Pae:  PA0110
  Rso:  RSc0369
  Atu:  AGc1411 AGc221
  Sme:  SMb21490 SMc00085
  Bme:  BMEI1460 BMEII0743
  Mlo:  mlr6850 mlr7500
  Ccr:  CC1769 CC3400
  Rpr:  RP733
  Rco:  RC1113
_______

[S] COG3347 Uncharacterized conserved protein
  Tac:  Ta0481_1
  Bsu:  BS_yuxG_1
  Bha:  BH1550_1
  Syn:  slr1208_1
  Ype:  YPO1811_1
  Atu:  AGl2690_1
  Sme:  SMb20837 SMb21015 SMc01619 SMc02322_1
  Mlo:  mll7289_1 mlr3601 mlr5708_1 mlr7271
_______

[S] COG3349 Uncharacterized conserved protein
  Hbs:  VNG0277G
  Mtu:  Rv3727
  MtC:  MT3830
  Syn:  sll0254_1 sll0254_3 slr0940 slr1254
  Nos:  all2382 alr1788 alr1832 alr2257 alr2785_1 alr2785_3
_______

[S] COG3350 Uncharacterized conserved protein
  Mac:  MA1330 MA4520_1
  Tac:  Ta1144
  Tvo:  TVN1241
  Pya:  PAE2746
  Tma:  TM0314
  Nos:  asl7593
  Ype:  YPO1943_2
  Pmu:  PM0451_2
  Cje:  Cj1660_2
_______

[N] COG3351 Putative archaeal flagellar protein D/E
  Hbs:  VNG0954C_3 VNG0955G
  Mja:  MJ0895 MJ0896
  Tac:  Ta0555
  Tvo:  TVN0609
  Pho:  PH0553
  Pab:  PAB1382
_______

[N] COG3352 Putative archaeal flagellar protein C
  Hbs:  VNG0954C_1
  Mja:  MJ0894
  Tac:  Ta0554
  Tvo:  TVN0608
  Pho:  PH0552
  Pab:  PAB1381
_______

[N] COG3353 Putative archaeal flagellar protein F
  Hbs:  VNG0953C
  Mja:  MJ0897
  Tac:  Ta0556
  Tvo:  TVN0610
  Pab:  PAB1383
_______

[N] COG3354 Putative archaeal flagellar protein G
  Hbs:  VNG0950a VNG2567C
  Mja:  MJ0898
  Tac:  Ta0557a
  Tvo:  TVN0611
  Pho:  PH0555
  Pab:  PAB1384
_______

[K] COG3355 Predicted transcriptional regulator
  Afu:  AF1846 AF2143
  Hbs:  VNG0142C VNG6072C VNG6454C VNG7053 VNG7156
  Mac:  MA0926 MA1664 MA4408
  Mja:  MJ1082 MJ1503
  Mka:  MK0576 MK0800
  Sso:  SSO0048 SSO0458 SSO1101 SSO1108 SSO1110 SSO2474
_______

[S] COG3356 Predicted membrane protein
  Afu:  AF0210
  Hbs:  VNG0230C
  Mth:  MTH1909
  Mka:  MK0976
  Tac:  Ta1043
  Tvo:  TVN0552
  Pya:  PAE0653
  Sso:  SSO2354
_______

[K] COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon
  Afu:  AF2182
  Hbs:  VNG0389C
  Mka:  MK0885
  Pab:  PAB3329
  Pya:  PAE3132
  Sso:  SSO2160
_______

[S] COG3358 Uncharacterized conserved protein
  Hbs:  VNG0733H
  Dra:  DR1390
  Cgl:  Cgl2984
  Xfa:  XF0761
_______

[L] COG3359 Predicted exonuclease
  Hbs:  VNG1213C
  Mac:  MA0820
  Mth:  MTH491
  Cac:  CAC0978
  Bsu:  BS_yprB
  Bha:  BH1765
_______

[S] COG3360 Uncharacterized conserved protein
  Hbs:  VNG1446H
  Mtu:  Rv0379
  MtC:  MT1547
  Pae:  PA0038
  Rso:  RSp1175
  Sme:  SMb20068
_______

[S] COG3361 Uncharacterized conserved protein
  Hbs:  VNG1746C
  Mtu:  Rv1927
  MtC:  MT1979
  Bsu:  BS_yqjF
_______

[F] COG3363 Archaeal IMP cyclohydrolase
  Hbs:  VNG2371C
  Mth:  MTH1020
  Mja:  MJ0626
  Mka:  MK0087
_______

[R] COG3364 Zn-ribbon containing protein
  Afu:  AF1183
  Hbs:  VNG2406C
  Mac:  MA4580
  Mth:  MTH1905
  Mka:  MK0166
_______

[S] COG3365 Uncharacterized protein conserved in archaea
  Afu:  AF1182
  Hbs:  VNG2408C
  Mac:  MA1382
  Mth:  MTH1904
  Mka:  MK0165
_______

[S] COG3366 Uncharacterized protein conserved in archaea
  Afu:  AF1528 AF2276
  Hbs:  VNG2455C
  Mac:  MA1324 MA3285 MA3910
  Mja:  MJ0871 MJ0880 MJ1556 MJ1589
  Mka:  MK0924 MK1088
_______

[S] COG3367 Uncharacterized conserved protein
  Hbs:  VNG1839H
  Mth:  MTH1837
  Mka:  MK0035 MK0569 MK1582
  Tac:  Ta0025
  Tvo:  TVN0072
  Tma:  TM0796
  Nos:  all3531
  Sme:  SMc03251
_______

[R] COG3368 Predicted permease
  Afu:  AF0392 AF1140
  Tac:  Ta0065m
  Tvo:  TVN0021
  Pho:  PH1231
  Pab:  PAB1697
  Sso:  SSO2601
_______

[S] COG3369 Uncharacterized conserved protein
  Mac:  MA0986 MA1680_1
  Mth:  MTH198
  Tac:  Ta0083
  Tvo:  TVN0170
  Ape:  APES056
  Rso:  RSc2912
  Mlo:  mlr4660_2
_______

[S] COG3370 Uncharacterized protein conserved in archaea
  Afu:  AF1964
  Tac:  Ta0241 Ta0584a
  Tvo:  TVN0643 TVN1354
  Pya:  PAE2742
  Sso:  SSO2867
  Ape:  APE1568
_______

[S] COG3371 Predicted membrane protein
  Tac:  Ta0785 Ta0986
  Tvo:  TVN0479 TVN0809
  Pho:  PH0262 PH1610 PH1785
  Pab:  PAB0162 PAB0225
  Pya:  PAE2889
  Sso:  SSO3111
  Ape:  APE2535
_______

[S] COG3372 Uncharacterized conserved protein
  Afu:  AF0357
  Hbs:  VNG6129C VNG7092
  Mac:  MA2404
  Tac:  Ta1017
  Tvo:  TVN0572
  Pho:  PH0449
  Pab:  PAB1046
  Pya:  PAE2447
  Sso:  SSO0475
  Nos:  all2950
_______

[S] COG3373 Uncharacterized protein conserved in archaea
  Mja:  MJ0905
  Tac:  Ta1082m
  Tvo:  TVN0493
  Pho:  PH0544
  Pab:  PAB1376
_______

[S] COG3374 Predicted membrane protein
  Afu:  AF0153
  Tac:  Ta1097 Ta1172
  Tvo:  TVN1250
  Pya:  PAE2526
  Sso:  SSO1807 SSO3150
  Tma:  TM1536
_______

[S] COG3375 Uncharacterized conserved protein
  Tac:  Ta1128m
  Tvo:  TVN1205
  Ape:  APE1534
  Dra:  DR0043 DRB0077
_______

[P] COG3376 High-affinity nickel permease
  Tac:  Ta1169
  Sso:  SSO1018
  Spo:  SPCC1884.02
  Mtu:  Rv2856
  MtC:  MT2923
  Sau:  SA2489
  Ype:  YPO2673
  Sty:  STM2783
  Rso:  RSp0628
  Hpy:  HP1077
  jHp:  jhp0348
_______

[S] COG3377 Uncharacterized conserved protein
  Afu:  AF1345
  Mac:  MA0210
  Tac:  Ta1206
  Tvo:  TVN0415
  Bsu:  BS_yunC
  Bha:  BH3452
_______

[R] COG3378 Predicted ATPase
  Hbs:  VNG0215C_2
  Sso:  SSO0140
  Cgl:  Cgl1693
  Mtu:  Rv1582c
  MtC:  MT3573.3
  Lla:  L37667
  Spy:  SPy2136
  Lin:  lin2587_2
  Nos:  all9003_1
  EcZ:  Z0339_2
  Ecs:  ECs0303_2
  Ype:  YPO0880_2
  Xfa:  XF0705 XF2505
  Rso:  RSc0839_2 RSc3229_2
_______

[S] COG3379 Uncharacterized conserved protein
  Hbs:  VNG0264H
  Pab:  PAB0780
  Sso:  SSO0185
  Ape:  APE1182 APE1199
_______

[R] COG3380 Predicted NAD/FAD-dependent oxidoreductase
  Hbs:  VNG0622H
  Syn:  sll1135
  Nos:  all3688
  Pae:  PA4657
  Rso:  RSc0533
_______

[R] COG3381 Uncharacterized component of anaerobic dehydrogenases
  Hbs:  VNG0832C
  Sso:  SSO1574
  Eco:  torD ycdY ynfI
  EcZ:  Z2581 ZtorD ZycdY
  Ecs:  ECs1153 ECs1412 ECs2297
  Ype:  YPO2038 YPO2968 YPO3322
  Sty:  STM0610 STM1137 STM1495 STM3821 STM4308
  Vch:  VC1515 VC1720
  Hin:  HI1044 HI1543
  Pmu:  PM0886 PM1757 PM1794
  Rso:  RSc2375
_______

[S] COG3382 Uncharacterized conserved protein
  Mka:  MK1683
  Pya:  PAE3145
  Sso:  SSO0658
  Ape:  APE1797
  Cac:  CAP0113
  Lla:  L36841
  Spy:  SPy1551
  Bsu:  BS_yhzB
  Bha:  BH1019
  Sty:  STM1665
  Pae:  PA4181
  Rso:  RSp0684
  Mlo:  mll6378
_______

[R] COG3383 Uncharacterized anaerobic dehydrogenase
  Mth:  MTH1552
  Tac:  Ta0425
  Tvo:  TVN0243
  Sso:  SSO2824
  Sau:  SA2102
  Lin:  lin2731
  Bsu:  BS_yjgC BS_yrhE
  Atu:  AGl347
  Sme:  SMa1523 SMc04444
  Mlo:  mll5396
_______

[S] COG3384 Uncharacterized conserved protein
  Mac:  MA0486
  Tac:  Ta1117
  Sso:  SSO1913 SSO2052
  Spo:  SPBC1709.16c
  Cac:  CAC0851
  Eco:  ygiD
  EcZ:  ZygiD
  Ecs:  ECs3927
  Ype:  YPO0659 YPO1764
  Sty:  STM1103 STM3189
  Pae:  PA2839 PA4124
  Pmu:  PM1531
  Rso:  RSc0015
  Ccr:  CC2958
_______

[L] COG3385 FOG: Transposase and inactivated derivatives
  Hbs:  VNG0052H VNG0059H VNG0112H VNG0337H VNG1590H VNG1653H VNG2175H
        VNG6007H VNG6015H VNG6016H VNG6038H VNG6042H VNG6079H VNG6106H
        VNG6111H VNG6119H VNG6147H VNG6148H VNG6161H VNG6290H VNG6331H
        VNG6345H VNG6366H VNG6395H VNG6447H VNG6484H VNG7005 VNG7012
        VNG7032 VNG7035 VNG7037 VNG7059 VNG7085 VNG7119 VNG7150
        VNG7172 VNG7174
  Mac:  MA0984 MA1757 MA2016 MA2679 MA2857 MA3329
  Tvo:  TVN0693 TVN1465
  Sso:  SSO0132 SSO0137 SSO0141 SSO0515 SSO0525 SSO0549 SSO0787
        SSO10674 SSO10982 SSO11138 SSO11307 SSO1180 SSO12063 SSO12067
        SSO1245 SSO1280 SSO1293 SSO1302 SSO1317 SSO1367 SSO1396
        SSO1408 SSO1417 SSO1448 SSO1466 SSO1472 SSO1473 SSO1480
        SSO1509 SSO1546 SSO1572 SSO1599 SSO1627 SSO1642 SSO1678
        SSO1688 SSO1703 SSO1735 SSO1775 SSO1779 SSO1796 SSO1822
        SSO1832 SSO1833 SSO1847 SSO1850 SSO1853 SSO1856 SSO1904
        SSO1937 SSO1938 SSO1978 SSO1995 SSO2086 SSO2103 SSO2104
        SSO2120 SSO2145 SSO2540 SSO2562 SSO2721 SSO2724 SSO2784
        SSO2834 SSO2845 SSO2855 SSO2883 SSO2888 SSO2889 SSO2922
        SSO2985 SSO3018 SSO3027 SSO3033 SSO3101 SSO3135 SSO3151
        SSO3259 SSO6050 SSO6566 SSO7351 SSO7635 SSO7986 SSO8002
        SSO9407
  Dra:  DR0010 DR0870 DR1284 DR1285 DR1618 DR1762 DR2222
        DRA0253 DRB0018 DRB0055 DRB0058 DRB0059 DRB0103 DRB0113
        DRB0114 DRB0132
  Bha:  BH0436 BH0691 BH0769
  Syn:  sll0010 sll0315 sll0317 sll1255 sll1474 sll1560 sll1780
        sll1997 sll1999 slr0180 slr1635 slr2036
  Nos:  all7115 all7244
  Eco:  yi41 yi81 yi81_g1 yi81_g2
  Rso:  RSc1484 RSc1864 RSc3168 RSc3242 RSp0465 RSp1149 RSp1300
  Sme:  SMb20766 SMc00721 SMc01453 SMc02719 SMc02731 SMc02762 SMc02823
        SMc03067 SMc04116
_______

[G] COG3386 Gluconolactonase
  Tac:  Ta0648
  Tvo:  TVN0929
  Sso:  SSO2705 SSO3041
  Sce:  YBR053c
  Dra:  DR0277 DR1790
  Sau:  SA2480
  Bsu:  BS_yvrE
  Sty:  STM2668
  Pae:  PA1293
  Pmu:  PM1248
  Xfa:  XF1297 XF1742
  Rso:  RSc2755 RSp0824 RSp0832
  Atu:  AGc1268 AGl1336 AGl1647 AGl1784 AGpA685_2
  Sme:  SMa0060 SMa0196 SMa0717_2 SMb20453 SMc00883 SMc04142
  Bme:  BMEI1997 BMEII0198
  Mlo:  mll1724_2 mll4328 mll7820 mlr4744 mlr7379 msl1031
  Ccr:  CC0820 CC1224 CC1805 CC2128
_______

[G] COG3387 Glucoamylase and related glycosyl hydrolases
  Mac:  MA1190 MA4050
  Mja:  MJ1610
  Tac:  Ta0286m Ta0342
  Tvo:  TVN0428 TVN1315
  Sso:  SSO0990 SSO1163 SSO1167 SSO2473 SSO2742 SSO2754
  Sce:  YIL099w
  Spo:  SPAC4H3.03c SPBC14C8.05c
  Cac:  CAC2810
  Cgl:  Cgl2214
  Mtu:  Rv2402
  MtC:  MT2474
  Nos:  alr1586
  Rso:  RSc1458
  Atu:  AGl102
  Mlo:  mlr4205
  Ccr:  CC2282
_______

[S] COG3388 Uncharacterized protein conserved in archaea
  Afu:  AF0281
  Hbs:  VNG1088C
  Mac:  MA0586
  Mka:  MK1410
  Tac:  Ta0278
  Tvo:  TVN1323
_______

[S] COG3389 Uncharacterized protein conserved in archaea
  Afu:  AF1952
  Hbs:  VNG1365C
  Mac:  MA4000
  Tac:  Ta0062
  Tvo:  TVN0018
_______

[S] COG3390 Uncharacterized protein conserved in archaea
  Afu:  AF0779
  Hbs:  VNG1253C_1 VNG2162C
  Mac:  MA0591 MA3018
  Tac:  Ta0388
  Tvo:  TVN1184
  Pho:  PH1894_1
  Pab:  PAB2165_1
_______

[S] COG3391 Uncharacterized conserved protein
  Mac:  MA0425 MA0509 MA0512 MA1590 MA1591 MA1838_3 MA1904_1
        MA1904_3 MA2021 MA2926_2 MA3118 MA3120 MA3122 MA3842_1
        MA4033
  Tac:  Ta1322
  Sso:  SSO3089
  Dra:  DR0058_2
  Cac:  CAC2386 CAC2535
  Mtu:  Rv0931c_2 Rv0978c_2 Rv0980c_2 Rv1057 Rv3524
  MtC:  MT0958_2 MT1006.1_2 MT1008_2 MT1087 MT3624
  Bsu:  BS_ywhK BS_ywhL
  Bha:  BH1943
  Nos:  all0422 all2941_2 alr1386
  Eco:  yncE
  EcZ:  Z2267
  Ecs:  ECs2056
  Sty:  STM1586
  Pae:  PA1688
  Rso:  RSc0127 RSc1252 RSp0820
  Sme:  SMb20179
  Mlo:  mlr3473
  Tpa:  TP0421
  Bbu:  BB0236
_______

[L] COG3392 Adenine-specific DNA methylase
  Fnu:  FN1923_1 FN1935
  Bha:  BH4004
  Hpy:  HP1208
  jHp:  jhp1131
  Cje:  Cj0208
_______

[R] COG3393 Predicted acetyltransferase
  Mac:  MA4512
  Mtu:  Rv2867c
  MtC:  MT2935
  Lin:  lin2312
  Bha:  BH1012
  Nos:  alr8066
  Ccr:  CC2648
  Tpa:  TP0815
_______

[S] COG3394 Uncharacterized protein conserved in bacteria
  Lin:  lin0230 lin0339 lin2456
  Bha:  BH0913
  Eco:  chbG
  EcZ:  ZydjC
  Ecs:  ECs2439
  Ype:  YPO2682
  Sty:  STM1317
  Vch:  VC1285
  Bme:  BMEII1100
  Mlo:  mll3087
_______

[S] COG3395 Uncharacterized protein conserved in bacteria
  Fnu:  FN0227
  Bha:  BH0802 BH0803
  Syn:  slr1342
  Nos:  alr3454
  Eco:  ygbK
  Ype:  YPO1235
  Sty:  STM0162 STM2917
  Hin:  HI1011
  Pmu:  PM1365
  Atu:  AGpA109
  Sme:  SMb20149 SMb20394 SMb20670
  Bme:  BMEII0188 BMEII1091
  Mlo:  mll7005
_______

[S] COG3396 Uncharacterized conserved protein
  Sso:  SSO1312 SSO1313 SSO2018 SSO2019
  Dra:  DR2384 DR2386
  Bha:  BH0196 BH0198
  Eco:  ydbO ydbP
  Rso:  RSp0604 RSp0606
  Sme:  SMb21638 SMb21640
_______

[S] COG3397 Uncharacterized protein conserved in bacteria
  Lla:  L11456
  Lin:  lin2611_1
  Bha:  BH1303_1
  Ype:  YPO3227
  Vch:  VCA0140_1 VCA0811
  Pae:  PA0852
_______

[S] COG3398 Uncharacterized protein conserved in archaea
  Afu:  AF1564
  Hbs:  VNG0320H
  Mac:  MA1529 MA1531 MA1551
  Mja:  MJ1398
_______

[S] COG3399 Uncharacterized protein conserved in bacteria
  Nme:  NMB0013
  NmA:  NMA0260
  Hpy:  HP1502
  jHp:  jhp1395
  Cje:  Cj0830
_______

[S] COG3400 Uncharacterized protein conserved in bacteria
  Aae:  aq_414
  Hpy:  HP0282
  jHp:  jhp0267
  Cje:  Cj1009c
_______

[R] COG3401 Fibronectin type 3 domain-containing protein
  Bsu:  BS_yxiM_1
  Bha:  BH1115_1 BH1116_1 BH3963_1 BH3963_3
  Hpy:  HP0746
  jHp:  jhp0683
  Cje:  Cj1279c
_______

[S] COG3402 Uncharacterized conserved protein
  Hbs:  VNG1355H
  Cgl:  Cgl6021
  Mtu:  Rv1227c
  Sau:  SA1876
  Lin:  lin0881
  Bsu:  BS_ydbS
  Bha:  BH1720
_______

[S] COG3403 Uncharacterized conserved protein
  Hbs:  VNG1099C
  Dra:  DR0614
  Bsu:  BS_ycgG BS_yqcI
_______

[E] COG3404 Methenyl tetrahydrofolate cyclohydrolase
  Tac:  Ta1477
  Tvo:  TVN0090
  Tma:  TM1560
  Fnu:  FN0739 FN1405
  Dra:  DR0324
  Cac:  CAC2310
  Spy:  SPy2084
_______

[G] COG3405 Endoglucanase Y
  Aae:  aq_1401
  Bha:  BH2105
  Eco:  yhjM
  EcZ:  ZyhjM
  Ecs:  ECs4411
  Sty:  STM3617
  Atu:  AGl3023gl
_______

[I] COG3407 Mevalonate pyrophosphate decarboxylase
  Hbs:  VNG0593G
  Tac:  Ta0461 Ta0893 Ta1305
  Tvo:  TVN0320 TVN0426 TVN0782
  Sso:  SSO2989
  Sce:  YNR043w
  Spo:  SPAC24C9.03
  Ecu:  ECU06g0490
  Lla:  L9089
  Spy:  SPy0877
  Spn:  SP0382
  Sau:  SA0548
  Lin:  lin0011
  Bbu:  BB0686
_______

[G] COG3408 Glycogen debranching enzyme
  Mac:  MA0905 MA1640 MA2628
  Tac:  Ta0147 Ta0341 Ta0686 Ta0687
  Tvo:  TVN0429 TVN1147 TVN1148
  Pho:  PH1222
  Pab:  PAB0689
  Sso:  SSO0991
  Sce:  YPR184w_2
  Dra:  DR0191
  Bha:  BH3691
  Nos:  all4639 alr0331
  Sme:  SMb20116 SMb20968
  Mlo:  mll0692
_______

[M] COG3409 Putative peptidoglycan-binding domain-containing protein
  Mac:  MA1145
  Dra:  DR2159
  Cac:  CAC0392 CAC0554_2 CAC0686_1 CAC1009_1 CAC1108_2 CAC1315 CAC1822_1
        CAC1876_2 CAC2416_2 CAC2506_3 CAC2621_2 CAC2695 CAC3244
  Cgl:  Cgl3032_1
  Mtu:  Rv3915_1
  MtC:  MT4034_1
  Mle:  ML2704_1
  Bsu:  BS_cwlA_2 BS_sleB_1 BS_xlyA_3 BS_xlyB_3 BS_ybfG BS_ykuG BS_yqeE_2
  Bha:  BH0966_2 BH1295_1 BH1631_1 BH3322_1 BH3648_1 BH3665_1 BH3671_1
  Syn:  slr1734_1
  Nos:  all1140_2 all1861 all2425 all2941_1 all3550 all3826 all4018_1
        all4294 alr1167_1 alr1540 alr1690 alr2169 alr2745 alr3930
        alr4984 alr5333
  Vch:  VCA0123_2
  Rso:  RSc1931_1
  Atu:  AGc1679 AGc2380_2 AGc3870_1 AGc883_3
  Sme:  SMb21573_1 SMc00060 SMc01374_2 SMc01575_1 SMc02231_2
  Bme:  BMEI0196_1 BMEI1356 BMEII0466_2
  Mlo:  mll0441_2 mll3427_1 mll5622_3 mll7072_2 mll9583_1 mlr7650
_______

[S] COG3410 Uncharacterized conserved protein
  Tac:  Ta0737_2
  Sso:  SSO1331_2
  Sce:  YPL245w_2
  Bha:  BH3996
_______

[C] COG3411 Ferredoxin
  Hbs:  VNG1561Cm_2
  Aae:  aq_108a
  Tma:  TM0011
  Dra:  DR2591
  Bha:  BH0367
  Syn:  sll1584
  Nos:  alr4030
  Rso:  RSc0329 RSp0627
_______

[S] COG3412 Uncharacterized protein conserved in bacteria
  Fnu:  FN1842
  Dra:  DRB0052
  Lla:  L47257
  Spn:  SP1173
  Sau:  SA0607
  Lin:  lin0369 lin2845
  Bha:  BH3395
  Eco:  ycgC_1
  EcZ:  ZycgC_1
  Ecs:  ECs1703_1
  Mlo:  mll5293
_______

[R] COG3413 Predicted DNA binding protein
  Afu:  AF0805 AF1429
  Hbs:  VNG0113H VNG0156C VNG0160G_3 VNG0826C VNG0852C VNG0996G_2 VNG1207C
        VNG1464G_3 VNG1488G VNG6065G VNG6461G VNG7048 VNG7161
  Tac:  Ta0166 Ta0675 Ta0748 Ta1231
  Tvo:  TVN0236 TVN0364 TVN0447 TVN0906
  Pya:  PAE2449
  Sso:  SSO0447 SSO0785 SSO1008 SSO1219 SSO1306 SSO1536 SSO1868
        SSO2058 SSO3061 SSO3080 SSO3097
_______

[G] COG3414 Phosphotransferase system, galactitol-specific IIB component
  Cac:  CAC2957
  Cgl:  Cgl2978_2
  Spy:  SPy0175 SPy1710 SPy1950
  Spn:  SP0646 SP1197 SP2037 SP2130
  Sau:  SA0237 SA0319
  Lin:  lin0507 lin2201 lin2799 lin2815
  Bha:  BH0191 BH0222
  Eco:  gatB sgaB
  EcZ:  Z1088 Z4876 ZgatB ZsgaB
  Ecs:  ECs0941 ECs2896 ECs4351 ECs5170
  Sty:  STM0885 STM1613 STM2343 STM3259 STM3783 STM4384
  Vch:  VCA0246_2
  Pmu:  PM0764_2
  Mpu:  MYPU_1980_2 MYPU_5950
  Mpn:  MPN495
_______

[L] COG3415 Transposase and inactivated derivatives
  Afu:  AF0678 AF1351 AF2140
  Hbs:  VNG0028C
  Sso:  SSO0040 SSO1200_1 SSO1238_1 SSO1264 SSO1362 SSO1384 SSO1518
        SSO1695_1 SSO1705 SSO1719 SSO1748 SSO1750 SSO1794 SSO1897_1
        SSO1919 SSO2006 SSO2090_1 SSO2132_1 SSO2927 SSO2930 SSO2933
        SSO2949 SSO2957 SSO2992 SSO8351
  Dra:  DR1523 DR1761 DR2028 DRB0056_1 DRB0120m_1 DRC0004
  Bha:  BH2521
  Nos:  all0363 all1972 all2067 all4868 alr0018 alr0552 alr1726
        alr1853 alr1858 alr2773 alr4628_1
  Sme:  SMa0018 SMa1803 SMa2043 SMa2373 SMb20305 SMb20783 SMb21661
        SMc00891 SMc01339 SMc02291 SMc02398 SMc03088 SMc03313
  Mlo:  mll6383
_______

[S] COG3416 Uncharacterized protein conserved in bacteria
  Buc:  BU181
  Pae:  PA3952
  Xfa:  XF0813
  Rso:  RSp0031
  Atu:  AGc4127
_______

[R] COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family)
  Eco:  ycfM
  EcZ:  ZycfM
  Ecs:  ECs1483
  Ype:  YPO1613
  Sty:  STM1207
  Buc:  BU358
  Vch:  VC1894
  Hpy:  HP1457
  jHp:  jhp1350
  Cje:  Cj0091
_______

[NUO] COG3418 Flagellar biosynthesis/type III secretory pathway chaperone
  Eco:  flgN
  EcZ:  ZflgN
  Ecs:  ECs1448
  Ype:  YPO1796
  Sty:  STM1171
  Buc:  BU335
  Vch:  VC2205
  Pae:  PA3352
_______

[NU] COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1
  Pae:  PA4554
  Xfa:  XF0032 XF0478 XF1224
  NmA:  NMA0609
  Rso:  RSc0718 RSc0724 RSc2675 RSp1288
_______

[P] COG3420 Nitrous oxidase accessory protein
  Pya:  PAE1362
  Pae:  PA3393
  Nme:  NMB0578
  NmA:  NMA0762
  Rso:  RSp1370
  Sme:  SMa1183
  Bme:  BMEII0972
_______

[S] COG3421 Uncharacterized protein conserved in bacteria
  Hin:  HI1054 HI1055
  NmA:  NMA1591
  jHp:  jhp1297
  Mpu:  MYPU_3950
_______

[S] COG3422 Uncharacterized conserved protein
  Mac:  MA3316
  Eco:  yegP
  EcZ:  Z3249
  Ecs:  ECs2888
  Ype:  YPO2854
  Pae:  PA0329
  Pmu:  PM0519
  Nme:  NMB1088
  NmA:  NMA1193 NMA1859
  Atu:  AGc390 AGpA518
  Bme:  BMEI1006
  Mlo:  msl4696
  Ccr:  CC2965
_______

[K] COG3423 Predicted transcriptional regulator
  Eco:  sfsB
  EcZ:  Znlp
  Ecs:  ECs4067 ECs4944
  Ype:  YPO2785
  Sty:  STM2374 STM2749 STM3306
  Hin:  HI1477
  Pmu:  PM0418
  NmA:  NMA1883
_______

[Q] COG3424 Predicted naringenin-chalcone synthase
  Dra:  DR2091 DRA0326
  Mtu:  Rv1372 Rv1660 Rv1665
  MtC:  MT1417 MT1698 MT1705
  Bsu:  BS_bcsA
  Bha:  BH0617
_______

[I] COG3425 3-hydroxy-3-methylglutaryl CoA synthase
  Afu:  AF0033_1 AF2415
  Hbs:  VNG1615G
  Mac:  MA4041
  Mth:  MTH792
  Mja:  MJ1546
  Mka:  MK1379
  Tac:  Ta1455
  Tvo:  TVN0130
  Pho:  PH0677
  Pab:  PAB0906
  Pya:  PAE2185
  Sso:  SSO0535
  Ape:  APE1873
  Sce:  YML126c
  Spo:  SPAC4F8.14c
  Ecu:  ECU10g0510
  Lla:  L13187
  Spy:  SPy0881
  Spn:  SP1727
  Sau:  SA0035 SA2334
  Lin:  lin1454
  Bsu:  BS_pksG
  Ype:  YPO1457
  Ccr:  CC1431_1
  Bbu:  BB0683
_______

[C] COG3426 Butyrate kinase
  Tma:  TM1754 TM1756
  Dra:  DR1120
  Cac:  CAC1660 CAC3075
  Lin:  lin1407
  Bsu:  BS_yqiU
_______

[S] COG3427 Uncharacterized conserved protein
  Hbs:  VNG0769H
  Tac:  Ta0632
  Tvo:  TVN0839
  Pya:  PAE1304
  Sso:  SSO2431 SSO2524
  Ape:  APE2225
  Dra:  DR2247
  Mtu:  Rv0369c
  MtC:  MT0384.1
  Rso:  RSc1464
  Sme:  SMc01132
  Bme:  BMEI1637
  Mlo:  mll5403
_______

[S] COG3428 Predicted membrane protein
  Hbs:  VNG1353C
  Cgl:  Cgl0622
  Mtu:  Rv1226c
  MtC:  MT1264
  Sau:  SA1877
  Lin:  lin0882
  Bsu:  BS_ydbT
  Bha:  BH1721
_______

[G] COG3429 Glucose-6-P dehydrogenase subunit
  Dra:  DR1597
  Cgl:  Cgl1539
  Mtu:  Rv1446c
  MtC:  MT1493
  Mle:  ML0580
  Syn:  slr1734_2
  Nos:  all4018_2
_______

[S] COG3430 Uncharacterized protein conserved in archaea
  Afu:  AF1096
  Hbs:  VNG1974H VNG2179H VNG6441H
  Mac:  MA0224 MA3567
  Tac:  Ta0496 Ta0851
  Tvo:  TVN0753 TVN0948
_______

[S] COG3431 Predicted membrane protein
  Hbs:  VNG2535H
  Mac:  MA2270
  Mka:  MK1207
  Tac:  Ta0502
  Tvo:  TVN0786
  Pho:  PH1414
  Pab:  PAB1876
  Pya:  PAE2435
  Sso:  SSO3199
  Aae:  aq_2087 aq_293
  Syn:  sll0218 slr0732
  Nos:  all4381 all4445 alr0613 alr1752
_______

[K] COG3432 Predicted transcriptional regulator
  Afu:  AF1459 AF1663 AF2083
  Mac:  MA1811
  Mja:  MJ0287 MJ0290
  Tac:  Ta0385 Ta0386
  Tvo:  TVN0317 TVN1186 TVN1188
  Pya:  PAE3660
  Sso:  SSO10449 SSO2827 SSO2986
  Ape:  APES025
_______

[Q] COG3433 Aryl carrier domain
  Mtu:  Rv2383c_1
  MtC:  MT2451_1
  Bsu:  BS_dhbB_2
  Eco:  entB_2
  EcZ:  ZentB_2
  Ecs:  ECs0634_2
  Ype:  YPO1911_1
  Sty:  STM0597_2
  Vch:  VC0771_2
  Pae:  PA4226_1
  Bme:  BMEII0079_2
_______

[T] COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains
  Aae:  aq_2044 aq_478
  Bsu:  BS_yuxH
  Vch:  VC0137 VC0515 VC1851
_______

[Q] COG3435 Gentisate 1,2-dioxygenase
  Sso:  SSO0648
  Cgl:  Cgl2965
  Bha:  BH2002 BH2004
  EcZ:  Z3393
  Ecs:  ECs3030
  Sty:  STM2178
  Pae:  PA2470
  Rso:  RSc1087 RSc1825
_______

[L] COG3436 Transposase and inactivated derivatives
  Hbs:  VNG0021H VNG0056H VNG6084H VNG6442H VNG7063 VNG7146
  Mac:  MA1425 MA2748 MA3529 MA3852
  Tvo:  TVN0684
  Dra:  DRC0028
  Spy:  SPy0131 SPy0133
  Spn:  SP1442
  EcZ:  Z0366 Z0367 Z1131 Z1132 Z1158 Z1160 Z1161
        Z1162 Z1163 Z1570 Z1571 Z1597 Z1599 Z1600
        Z1601 Z1602 Z1928 Z1929 Z2072 Z2079 Z2080
        Z2081 Z2127 Z2130 Z3155 Z3156 Z4314 Z4316
        Z4317 Z4336 Z4337 Z4338 Z4340 Z5097 Z5098
        Z6015 Z6016
  Ecs:  ECs0329 ECs0330 ECs1103 ECs1104 ECs1307 ECs1308 ECs1336
        ECs1338 ECs1339 ECs1340 ECs1341 ECs1659 ECs1660 ECs1818
        ECs1819 ECs2223 ECs2224 ECs2790 ECs2791 ECs3492 ECs3493
        ECs3844 ECs3847 ECs3848 ECs3865 ECs3866 ECs3868 ECs3869
        ECs4546 ECs4547
  Ype:  YPCD1.68c
  Atu:  AGpA531 AGpA534
  Sme:  SMa0861 SMa1610 SMa1612 SMa1613 SMa2171 SMa2251 SMb20541
        SMb20542 SMb21084 SMb21085 SMc03256 SMc03279 SMc03280 SMc03298
        SMc03300 SMc03751 SMc04428
  Bme:  BMEII0712 BMEII0713 BMEII0714
  Mlo:  mlr6244 mlr6247 msr9005 msr9044
_______

[KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain
  Tma:  TM0186 TM1147
  Cac:  CAC3251
  Syn:  sll1624 slr2100
  Nos:  alr3920
  Vch:  VC1087 VC1348 VCA0210
  Pae:  PA2572 PA4781
  Xfa:  XF1113
_______

[S] COG3439 Uncharacterized conserved protein
  Hbs:  VNG0144H
  Mac:  MA3947
  Tac:  Ta0533
  Tvo:  TVN0121 TVN1008
  Sso:  SSO0995
  Aae:  aq_1800 aq_1802 aq_598
  Sty:  STM4505
  Nme:  NMB0783
  NmA:  NMA0993
  Bme:  BMEI0634_2
  Tpa:  TP0895
_______

[V] COG3440 Predicted restriction endonuclease
  Tvo:  TVN0722
  Dra:  DR1533
  Nos:  all8554 alr4915
  EcZ:  Z5892
  Ecs:  ECs5254
  Nme:  NMB0827
  NmA:  NMA1036
_______

[R] COG3442 Predicted glutamine amidotransferase
  Cac:  CAC0961
  Cgl:  Cgl0246
  Mtu:  Rv3713
  MtC:  MT3816
  Mle:  ML2327
  Lla:  L113931
  Spy:  SPy1034
  Spn:  SP1590
  Sau:  SA1707
  Syn:  slr1742
  Nos:  alr2718
_______

[R] COG3443 Predicted periplasmic or secreted protein
  Lla:  L136652_2
  Spy:  SPy0714_2
  Spn:  SP2169_2
  Sau:  SA2194_2
  Bsu:  BS_yrpE
  Eco:  yodA
  EcZ:  Z3065
  Ecs:  ECs2711
  Sty:  STM1263
  Atu:  AGc1935
  Mlo:  mll6391
_______

[G] COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
  Fnu:  FN0631
  Cac:  CAC1458 CAP0066_2
  Lla:  L1762179_2
  Spy:  SPy0631 SPy1058 SPy1738_2
  Spn:  SP0061 SP0284_2 SP0323 SP2163
  Lin:  lin0021 lin0143_2 lin0776 lin2110
  Bsu:  BS_levE
  Eco:  agaB agaV manX_2
  EcZ:  Z5616 ZagaB ZagaV ZmanX_2
  Ecs:  ECs2527_2 ECs4011 ECs4018 ECs5001
  Ype:  YPO0834 YPO1758_2
  Sty:  STM0576 STM1830_2 STM3771 STM4536
  Pmu:  PM0834_2
_______

[R] COG3445 Acid-induced glycyl radical enzyme
  Eco:  yfiD
  EcZ:  ZyfiD
  Ecs:  ECs3445
  Ype:  YPO2705
  Sty:  STM2646
  Vch:  VC2361
  Hin:  HI0017
  Pmu:  PM0064
_______

[T] COG3447 Predicted integral membrane sensor domain
  Syn:  sll1672_1 slr1798_1 slr1805_1
  Nos:  all3275_1
  Eco:  yegE_1
  EcZ:  Z3235m_1
  Ecs:  ECs2874 ECs2875
  Sty:  STM2123_1
  Pae:  PA1181_1
  Sme:  SMb20868_1
  Mlo:  mll0984_1
_______

[T] COG3448 CBS-domain-containing membrane protein
  Syn:  slr0789
  Pae:  PA1854
  Rso:  RSc0130
  Atu:  AGc2783
  Sme:  SMc02600
  Mlo:  mll8143
_______

[L] COG3449 DNA gyrase inhibitor
  Cac:  CAC3490
  Lin:  lin1814_2
  Bsu:  BS_yosT
  Bha:  BH0401_2 BH4009
  Eco:  sbmC ygiV
  EcZ:  Z4375 ZsbmC
  Ecs:  ECs2811 ECs3905
  Sty:  STM2061 STM3175_2
  Rso:  RSc0132_2 RSp1247_2
  Mlo:  mll4902_2
  Ccr:  CC2527_2
_______

[R] COG3450 Predicted enzyme of the cupin superfamily
  Tma:  TM1112
  Nos:  asr1714
  Sty:  STM3127
  Pae:  PA1917 PA2318 PA2762 PA3425 PA5314
  Atu:  AGc2315 AGc536 AGl2844
  Sme:  SMa1840 SMc01810
  Mlo:  mll2946 mll3593 mll7047 mlr4195 mlr4196 mlr4197 mlr8466
_______

[U] COG3451 Type IV secretory pathway, VirB4 components
  Hbs:  VNG6144G
  Cac:  CAC2047
  Sty:  PSLT088_2
  Xfa:  XFa0007
  Rso:  RSc2581
  Hpy:  HP0017 HP0441 HP0459 HP0544
  jHp:  jhp0015 jhp0492 jhp0917 jhp0918
  Atu:  AGpA223 AGpT8 AGpT83
  Sme:  SMa1315
  Bme:  BMEII0028
  Mlo:  mll9608 mlr6400 mlr9251
  Ccr:  CC2419
  Rpr:  RP103 RP784
  Rco:  RC0141 RC1217
  Mpu:  MYPU_3830
_______

[T] COG3452 Predicted periplasmic ligand-binding sensor domain
  Syn:  slr1759_1
  Nos:  all2875_1
  Vch:  VCA0960_1
  Sme:  SMc03178_1
  Mlo:  mlr2027_1
_______

[S] COG3453 Uncharacterized protein conserved in bacteria
  Xfa:  XF0768_1
  Nme:  NMB1727
  NmA:  NMA1982
  Atu:  AGc3866 AGl2726_1
  Sme:  SMa1057_1 SMc01573
  Bme:  BMEII0587
  Mlo:  mll8311 mlr2158_1
  Ccr:  CC0924
_______

[P] COG3454 Metal-dependent hydrolase involved in phosphonate metabolism
  Nos:  all2216 all2221_2
  Eco:  phnM
  EcZ:  ZphnM
  Ecs:  ECs5078
  Ype:  YPO3463
  Pae:  PA3374
  Atu:  AGc279
  Sme:  SMb21171
  Bme:  BMEI1106
  Mlo:  mll4974 mll9156 mlr2305 mlr9276
_______

[S] COG3455 Uncharacterized protein conserved in bacteria
  EcZ:  Z0255
  Ecs:  ECs0224
  Ype:  YPO0514_1 YPO0975 YPO1468 YPO2723_1 YPO3598
  Sty:  STM0282_1
  Vch:  VCA0115
  Pae:  PA0078_1 PA1668 PA2362
  Rso:  RSp0739
  Atu:  AGl1060_1
  Mlo:  mlr2348_1 mlr2359_1
_______

[T] COG3456 Uncharacterized conserved protein, contains FHA domain
  EcZ:  Z0258
  Ecs:  ECs0227
  Ype:  YPO3595
  Vch:  VCA0112
  Pae:  PA0081 PA1665
  Atu:  AGl1057
  Mlo:  mlr2345 mlr2358
_______

[E] COG3457 Predicted amino acid racemase
  Tma:  TM1597
  Sau:  SA1980
  Bha:  BH0591
  Eco:  yhfX
  Sty:  STM2358
  Mlo:  mlr5700_1
_______

[Q] COG3458 Acetyl esterase (deacetylase)
  Tma:  TM0077 TM0435
  Spn:  SP1695
  Bsu:  BS_cah
  Bha:  BH3326
  Atu:  AGc708
  Mlo:  mlr6993
_______

[G] COG3459 Cellobiose phosphorylase
  Tma:  TM1848
  Cac:  CAC0609
  Lin:  lin1839
  Ype:  YPO0610
  Vch:  VC0612
  Atu:  AGc4949
  Sme:  SMc04382
  Bme:  BMEI1837
  Mlo:  mlr8325
_______

[Q] COG3460 Uncharacterized enzyme of phenylacetate metabolism
  Dra:  DR2385
  Bha:  BH0197
  Eco:  ynbF
  Rso:  RSp0605
  Sme:  SMb21639
_______

[S] COG3461 Uncharacterized conserved protein
  Tac:  Ta0034
  Tvo:  TVN0040
  Tma:  TM0786
  Mlo:  mll1513
_______

[S] COG3462 Predicted membrane protein
  Hbs:  VNG6251H
  Tac:  Ta1504
  Tvo:  TVN1202 TVN1451
  Tma:  TM0315
_______

[S] COG3463 Predicted membrane protein
  Tac:  Ta0705m Ta0709
  Tvo:  TVN0886
  Pho:  PH1142 PH1606
  Pab:  PAB1990
  Syn:  sll1352
_______

[L] COG3464 Transposase and inactivated derivatives
  Mac:  MA2406 MA2954 MA3988
  Tvo:  TVN0466 TVN0687 TVN0688
  Fnu:  FN0274 FN0275 FN0599
  Cgl:  Cgl0876 Cgl1015 Cgl1042 Cgl2316 Cgl2427
  Mtu:  Rv0741 Rv1313c Rv2810c Rv3798
  MtC:  MT0725 MT0767 MT1353 MT3905
  Spn:  SP0460 SP0836 SP1262 SP1444 SP1582 SP1639 SP1692
        SP1792
  Sau:  SA0369 SA0586 SA0787 SA1006 SA1541 SA1677 SA1884
        SA2289
  Bha:  BH0089 BH0123 BH0245 BH0270 BH0379 BH0416 BH0668
        BH0767 BH0954 BH1049 BH1170 BH1183 BH1307 BH1338
        BH1347 BH1381 BH1412 BH1473 BH1546 BH1686 BH1701
        BH1929 BH1946 BH1963 BH2154 BH2204 BH2377 BH2472
        BH2477 BH2641 BH2651 BH2774 BH2922 BH2967 BH2978
        BH3137 BH3247 BH3409 BH3499 BH3507 BH3565 BH3585
        BH3752
  Nos:  all7161 alr1609 alr2698 alr7003 alr7305 alr7349 alr7350
        alr7386 alr8016 asr7006
  Rso:  RSc2573 RSp1547
  Atu:  AGpA139
  Sme:  SMa0643
  Mlo:  mll5961 mll6319 mll9026
_______

[S] COG3465 Uncharacterized conserved protein
  Afu:  AF1156
  Tac:  Ta0070
  Tvo:  TVN0724
  Bsu:  BS_ywgA
  Bha:  BH3817
_______

[S] COG3466 Putative transposon-encoded protein
  Afu:  AF0278 AF0305 AF0641 AF0857 AF2091 AF2223
  Mja:  MJ0362
  Tvo:  TVN0140 TVN1041
_______

[R] COG3467 Predicted flavin-nucleotide-binding protein
  Hbs:  VNG1182H VNG1487H VNG1621H
  Mac:  MA1206 MA2197
  Mth:  MTH1097
  Tac:  Ta1372
  Fnu:  FN0030 FN1023
  Dra:  DR0842
  Cac:  CAC2475
  Lla:  L16252
  Bha:  BH0577
  Nos:  all4737
  Sty:  STM0699
  Nme:  NMB0744
  NmA:  NMA0957
  Rso:  RSc3120
  Sme:  SMa0763 SMa1151 SMa1223
  Bme:  BMEI0631
  Mlo:  mll1820 mll6595 mll6688 mlr4723 mlr9635
_______

[MU] COG3468 Type V secretory pathway, adhesin AidA
  Eco:  b1169 b1170 flu yaiU ycgV_2 ydeU ydhQ
        yejO yfaL_2 ypjA
  EcZ:  Z0402_2 Z0469_2 Z1211 Z1651 Z2196 Z2691 ZyejO
        ZyfaL_2 ZypjA
  Ecs:  ECs0362_2 ECs0424_2 ECs1396 ECs2116 ECs2373 ECs3081 ECs3116_2
        ECs3515
  Ype:  YPO0309_2 YPO0587 YPO1004_2 YPO1672_2 YPO2796 YPO2886 YPO3028
        YPO3984_2
  Sty:  STM0373_2 STM2513_2 STM3757_2
  Hin:  HI0247 HI0990
  Pmu:  PM1717
  Nme:  NMB0700 NMB1985 NMB1998
  NmA:  NMA0457 NMA0905 NMA1725 NMA2175
  Atu:  AGpA511_2 AGpA528
  Sme:  SMc02406_2
  Bme:  BMEI0058 BMEII0148 BMEII1069
  Mlo:  mll5031
_______

[G] COG3469 Chitinase
  Lla:  L9964_1
  Lin:  lin1996
  Vch:  VC1952_2
  Pae:  PA2300_1
_______

[P] COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport
  Fnu:  FN1252
  Ype:  YPO1942
  Pmu:  PM0452
  Cje:  Cj1659
  Bme:  BMEII0885
  Tpa:  TP0971
_______

[S] COG3471 Predicted periplasmic/secreted protein
  Pae:  PA4495
  Pmu:  PM1566
  Nme:  NMB0848
  NmA:  NMA1059
  Rso:  RSc2404
_______

[S] COG3472 Uncharacterized conserved protein
  Hbs:  VNG6097C VNG7073
  Mja:  MJ0686_2
  Tma:  TM0991_2
  Cgl:  Cgl1252_2
  Nos:  all3615_2
_______

[Q] COG3473 Maleate cis-trans isomerase
  Pho:  PH0985 PH1150
  Pab:  PAB2420
  Sso:  SSO2939
  Ape:  APE2520
  Rso:  RSc1822
  Sme:  SMb20431
  Mlo:  mlr7137
_______

[C] COG3474 Cytochrome c2
  Sce:  YEL039c YJR048w
  Spo:  SPCC191.07
  Atu:  AGc155 AGl1651 AGl976
  Sme:  SMa1487 SMb20172 SMc01981 SMc02897
  Bme:  BMEI1903 BMEII1068
  Mlo:  mll1048 mll5495 mlr2752 mlr4905
  Ccr:  CC1210 CC1632 CC2935
  Rpr:  RP253
  Rco:  RC0337
_______

[M] COG3475 LPS biosynthesis protein
  Fnu:  FN1246
  Lla:  L15884
  Spn:  SP1273 SP1274 SP1367
  Hin:  HI1540
  Rpr:  RP688 RP689
  Rco:  RC1054 RC1055
_______

[T] COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
  Afu:  AF1475
  Mac:  MA4214
  Spo:  SPBC725.10
  Cac:  CAC0262
  Lla:  L173469
  Bsu:  BS_ytaB
  Syn:  sll1845
  Nos:  all3007 all4617 alr4114 alr4115
  Atu:  AGc485
  Sme:  SMa1079
_______

[S] COG3477 Predicted periplasmic/secreted protein
  Lla:  L128688
  Sau:  SA0175
  Eco:  yagU
  EcZ:  ZyagU
  Ecs:  ECs0317
  Ype:  YPO2574
  Cje:  Cj0014c
_______

[R] COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
  Mac:  MA3295
  Mja:  MJ1230
  Fnu:  FN1369
  Lla:  L121994
  Bsu:  BS_ypzCa
_______

[Q] COG3479 Phenolic acid decarboxylase
  Lla:  L193734
  Bsu:  BS_padC
  Vch:  VC2240
_______

[T] COG3480 Predicted secreted protein containing a PDZ domain
  Cgl:  Cgl0759
  Mtu:  Rv3194c
  MtC:  MT3286
  Mle:  ML0643
  Lla:  L20937
  Spy:  SPy1536
  Spn:  SP1967
  Lin:  lin2157
  Bsu:  BS_ylbL
  Bha:  BH2586 BH2930
_______

[R] COG3481 Predicted HD-superfamily hydrolase
  Mja:  MJ0837
  Mka:  MK0390
  Fnu:  FN1207
  Cac:  CAC0749 CAC1938 CAC2261
  Lla:  L184033
  Spy:  SPy0267
  Spn:  SP1980
  Sau:  SA1660
  Lin:  lin2323
  Bsu:  BS_yhaM
  Bha:  BH1175 BH3191
  Sme:  SMa0499
_______

[S] COG3482 Uncharacterized conserved protein
  Mac:  MA0164
  Mth:  MTH988 MTH989
  Mtu:  Rv1376
  MtC:  MT1420
  Atu:  AGl2517
  Sme:  SMb21116 SMc01412
  Mlo:  mll0573
_______

[E] COG3483 Tryptophan 2,3-dioxygenase (vermilion)
  Dra:  DRA0339
  Pae:  PA2579
  Rso:  RSc0758 RSp0694
  Mlo:  mlr0620
  Ccr:  CC2886
_______

[O] COG3484 Predicted proteasome-type protease
  Syn:  sll0069
  Pae:  PA1733
  Rso:  RSc1124
  Mlo:  mll0713
_______

[Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit
  Cgl:  Cgl0238 Cgl1134 Cgl2346 Cgl2347 Cgl2351 Cgl2996
  Ype:  YPO0987
  Pae:  PA0153 PA0154 PA2507
  Rso:  RSc1441 RSc1442
  Atu:  AGc4592 AGl656 AGl658
  Sme:  SMb20576 SMb20577 SMb21380
  Bme:  BMEII0635 BMEII0636
  Mlo:  mlr7208 mlr7210
  Ccr:  CC2408 CC2409
  Rpr:  RP396
  Rco:  RC0543
_______

[Q] COG3486 Lysine/ornithine N-monooxygenase
  Hbs:  VNG6214G
  Spo:  SPAC23G3.03
  Bha:  BH2620
  Nos:  all0392
  Ype:  YPO0993 YPO1530
  Pae:  PA2386
  Rso:  RSc1817 RSp1425
  Sme:  SMa2408
  Mlo:  mlr5923
_______

[P] COG3487 Uncharacterized iron-regulated protein
  Vch:  VC1264
  Pae:  PA4370
  Atu:  AGc493
  Sme:  SMc00402
  Mlo:  mlr5523
_______

[C] COG3488 Predicted thiol oxidoreductase
  Vch:  VC1265
  Pae:  PA4371
  Atu:  AGc491
  Sme:  SMc00401
  Mlo:  mlr5527
_______

[R] COG3489 Predicted periplasmic lipoprotein
  Vch:  VC1266
  Pae:  PA4372
  Atu:  AGc489
  Sme:  SMc00400
  Mlo:  mlr5528
_______

[S] COG3490 Uncharacterized protein conserved in bacteria
  Vch:  VC1267
  Pae:  PA4373
  Atu:  AGc487
  Sme:  SMc00460
  Mlo:  mlr5529
_______

[R] COG3491 Isopenicillin N synthase and related dioxygenases
  Spo:  SPAC25B8.13c SPCC965.15
  Ype:  YPO1316
  Pae:  PA0147 PA4191
  Rso:  RSp1529
  Cje:  Cj1199
  Mlo:  mll0111 mlr6892 msr9113
  Ccr:  CC0200
_______

[S] COG3492 Uncharacterized protein conserved in bacteria
  Vch:  VC1963
  Pae:  PA3440
  Atu:  AGl2149
  Sme:  SMc04008
  Mlo:  mlr3823
  Ccr:  CC1498
_______

[C] COG3493 Na+/citrate symporter
  Fnu:  FN1375
  Lla:  L123159
  Spy:  SPy1109
  Bsu:  BS_yufR BS_yxkJ
  Bha:  BH0400
  Sty:  STM0057
  Vch:  VC0795
_______

[S] COG3494 Uncharacterized protein conserved in bacteria
  Aae:  aq_1276
  Fnu:  FN0596
  Atu:  AGc2562
  Sme:  SMc02090
  Bme:  BMEI0834
  Mlo:  mll0631
  Ccr:  CC1910
  Rpr:  RP730
  Rco:  RC1110
_______

[S] COG3495 Uncharacterized protein conserved in bacteria
  Vch:  VC2555
  Pae:  PA4066 PA5423
  Mlo:  mlr0556
_______

[S] COG3496 Uncharacterized conserved protein
  Mtu:  Rv0448c
  MtC:  MT0464
  Vch:  VC1121
  Atu:  AGc3600
  Mlo:  mll8086
  Ccr:  CC2599
_______

[R] COG3497 Phage tail sheath protein FI
  Nos:  all3325
  EcZ:  Z2991
  Ecs:  ECs2645
  Ype:  YPO1875
  Sty:  STM2701 STM4213
  Pae:  PA0622
  Xfa:  XF0727 XF2485
  Rso:  RSc1918
  Atu:  AGc813
  Mlo:  mlr6548
_______

[R] COG3498 Phage tail tube protein FII
  EcZ:  Z2990
  Ecs:  ECs2644
  Sty:  STM2700 STM4212
  Pae:  PA0623
  Xfa:  XF0728 XF2484
  Rso:  RSc1917
_______

[R] COG3499 Phage protein U
  EcZ:  Z2985
  Ecs:  ECs2639
  Sty:  STM2696
  Pae:  PA0626_2
  Xfa:  XF0731 XF2481
  Rso:  RSc1913
  Atu:  AGc815
_______

[R] COG3500 Phage protein D
  Nos:  all3320_1
  Eco:  yegZ
  EcZ:  Z2992
  Ecs:  ECs2646
  Sty:  STM2695 STM4208
  Pae:  PA0628
  Xfa:  XF0733 XF2479
  Rso:  RSc1912
  Atu:  AGc819
  Mlo:  mlr6558
_______

[S] COG3501 Uncharacterized protein conserved in bacteria
  Nos:  all3320_2
  EcZ:  Z0267 Z0707 ZvgrE
  Ecs:  ECs0236 ECs0607 ECs2060
  Ype:  YPO0507 YPO0764 YPO0970_1 YPO1472_1 YPO2725 YPO3606 YPO3613
  Sty:  STM0289
  Vch:  VC1416_1 VCA0018 VCA0123_1
  Pae:  PA0091 PA0095 PA0262_1 PA1511_1 PA2373 PA2685 PA3294
        PA3486 PA5090 PA5266
  Rso:  RSc0958_1 RSc1944_1 RSc3220_1 RSc3222 RSc3430 RSp0103_1 RSp0175_1
        RSp0518_1 RSp0629_1 RSp0738_1 RSp0750_1 RSp0768_1 RSp1139
  Atu:  AGl1033 AGl2373
  Mlo:  mll2357 mlr6559
_______

[S] COG3502 Uncharacterized protein conserved in bacteria
  Dra:  DR0242
  Mtu:  Rv2705c
  MtC:  MT2778
  Nos:  alr1016
  Atu:  AGc860
  Sme:  SMc02246
  Bme:  BMEI1610
  Mlo:  mll5682
  Ccr:  CC0527
_______

[S] COG3503 Predicted membrane protein
  Afu:  AF0524
  Mac:  MA4469
  Mth:  MTH789
  Pae:  PA4838
  Rso:  RSc2728
  Atu:  AGc2846
  Sme:  SMc01258
  Bme:  BMEI0809
  Mlo:  mlr1315
  Ccr:  CC2989
_______

[U] COG3504 Type IV secretory pathway, VirB9 components
  Xfa:  XF2051 XFa0013 XFa0042
  Rso:  RSc2576
  Hpy:  HP0039m HP0528_1 HP0528_3
  jHp:  jhp0035 jhp0477_1 jhp0477_3 jhp0922m_1
  Atu:  AGpA229 AGpT12 AGpT73
  Sme:  SMa1306
  Bme:  BMEII0033
  Mlo:  mll9604 mlr6404 mlr9258
  Ccr:  CC2421 CC2686
  Rpr:  RP286 RP290
  Rco:  RC0384 RC0388
_______

[U] COG3505 Type IV secretory pathway, VirD4 components
  Cac:  CAC1969
  Nos:  all8037 alr7213 alr7539
  Sty:  PSLT104_1
  Xfa:  XF2057 XFa0016
  Rso:  RSc2586
  Hpy:  HP0524 HP1006
  jHp:  jhp0473
  Atu:  AGl58 AGpA160 AGpT23 AGpTbx12
  Sme:  SMa0929
  Mlo:  mlr6395 mlr9261 mlr9747
  Rpr:  RP293
  Rco:  RC0391
_______

[S] COG3506 Uncharacterized conserved protein
  Sce:  YJL217w
  Nos:  all7165
  Vch:  VCA0345
  Sme:  SMb20675
  Mlo:  mlr5237
_______

[G] COG3507 Beta-xylosidase
  Cac:  CAC0577 CAC3452 CAP0114
  Lla:  L0234
  Bsu:  BS_abnA BS_xynB BS_yxiA
  Bha:  BH1878 BH3683
  Eco:  yagH
  Sme:  SMc04247
  Ccr:  CC0813 CC0989 CC2802
_______

[Q] COG3508 Homogentisate 1,2-dioxygenase
  Sso:  SSO1533
  Vch:  VC1345
  Pae:  PA2009
  Rso:  RSp0691
  Sme:  SMc03208
  Mlo:  mlr8303
  Ccr:  CC2532
_______

[Q] COG3509 Poly(3-hydroxybutyrate) depolymerase
  Cgl:  Cgl2567
  Mtu:  Rv0671 Rv3298c
  MtC:  MT0700 MT3397
  Mle:  ML0715
  Pae:  PA0543
  Rso:  RSc2149
  Atu:  AGc4370
  Sme:  SMa1961
  Mlo:  mlr2444
  Ccr:  CC0847
_______

[V] COG3510 Cephalosporin hydroxylase
  Mtu:  Rv2959c
  MtC:  MT3035
  Mle:  ML0127
  Syn:  slr1619
  Sme:  SMb21425
  Mlo:  mlr2452
_______

[M] COG3511 Phospholipase C
  Sso:  SSO2789
  Mtu:  Rv1755c Rv2349c Rv2350c Rv2351c
  MtC:  MT1799 MT2414 MT2415 MT2416
  Pae:  PA0844 PA3319
  Rso:  RSc0319 RSp1174
  Mlo:  mlr8246
  Ccr:  CC3031
_______

[S] COG3512 Uncharacterized protein conserved in bacteria
  Spy:  SPy1048
  Pmu:  PM1125
  NmA:  NMA0629
  Cje:  Cj1521c
_______

[S] COG3513 Uncharacterized protein conserved in bacteria
  Spy:  SPy1046
  Lin:  lin2744
  Pmu:  PM1127
  NmA:  NMA0631
  Cje:  Cj1523c
_______

[S] COG3514 Uncharacterized protein conserved in bacteria
  Ype:  YPO1882
  Sty:  STM4529
  Xfa:  XF0532 XF1563
  Nme:  NMB1117
  NmA:  NMA1326
  Atu:  AGpA644
  Sme:  SMc04432
  Mlo:  mlr2676
_______

[S] COG3515 Uncharacterized protein conserved in bacteria
  EcZ:  Z0249 Z0251 Z0252
  Ecs:  ECs0217 ECs0220 ECs0221
  Ype:  YPO0499 YPO1483 YPO1489 YPO2949 YPO3602 YPO3604 YPO3605
  Sty:  STM0266
  Vch:  VCA0119 VCA0121
  Pae:  PA0082 PA1656 PA2360
  Rso:  RSp0759
  Atu:  AGl1042
  Mlo:  mlr2336
_______

[S] COG3516 Uncharacterized protein conserved in bacteria
  EcZ:  Z0264
  Ecs:  ECs0233
  Ype:  YPO0500 YPO0978 YPO1465 YPO2939 YPO3707
  Sty:  STM0273
  Vch:  VCA0107
  Pae:  PA0083 PA1657 PA2365
  Rso:  RSp0743
  Atu:  AGl1045
  Mlo:  mlr2337
_______

[S] COG3517 Uncharacterized protein conserved in bacteria
  EcZ:  Z0262
  Ecs:  ECs0231
  Ype:  YPO0501 YPO0977 YPO1466 YPO2938 YPO3706
  Sty:  STM0274
  Vch:  VCA0108
  Pae:  PA0084 PA1658 PA2366
  Rso:  RSp0744
  Atu:  AGl1047 AGl1048
  Mlo:  mlr2338
_______

[S] COG3518 Uncharacterized protein conserved in bacteria
  EcZ:  Z0261
  Ecs:  ECs0230
  Ype:  YPO0503 YPO1488 YPO2728 YPO3705
  Sty:  STM0269
  Vch:  VCA0109
  Pae:  PA0087 PA1659 PA2368
  Rso:  RSp0746
  Atu:  AGl1052
  Mlo:  mlr2341
_______

[S] COG3519 Uncharacterized protein conserved in bacteria
  EcZ:  Z0260
  Ecs:  ECs0229
  Ype:  YPO0504 YPO1485 YPO2947
  Sty:  STM0268
  Vch:  VCA0110
  Pae:  PA0088 PA1660 PA2369
  Rso:  RSp0747
  Atu:  AGl1054
  Mlo:  mlr2342
_______

[S] COG3520 Uncharacterized protein conserved in bacteria
  EcZ:  Z0259
  Ecs:  ECs0228
  Ype:  YPO0394 YPO0505 YPO1486 YPO2948 YPO3594
  Sty:  STM0267
  Vch:  VCA0111
  Pae:  PA0089 PA1661 PA2370
  Rso:  RSp0748
  Atu:  AGl1055
  Mlo:  mlr2343
_______

[S] COG3521 Uncharacterized protein conserved in bacteria
  EcZ:  Z0257
  Ecs:  ECs0226
  Ype:  YPO0512 YPO1487 YPO2935 YPO3596
  Sty:  STM0280
  Vch:  VCA0113
  Pae:  PA0080 PA1666
  Rso:  RSp0741
  Mlo:  mlr2346
_______

[S] COG3522 Uncharacterized protein conserved in bacteria
  EcZ:  Z0256
  Ecs:  ECs0225
  Ype:  YPO0513 YPO0976 YPO1467 YPO2934 YPO3597
  Sty:  STM0281
  Vch:  VCA0114
  Pae:  PA0079 PA1667 PA2363
  Rso:  RSp0740
  Atu:  AGl1059
  Mlo:  mlr2347
_______

[S] COG3523 Uncharacterized protein conserved in bacteria
  EcZ:  Z0250
  Ecs:  ECs0218
  Ype:  YPO0515 YPO1482 YPO2724 YPO3603
  Sty:  STM0285
  Vch:  VCA0120
  Pae:  PA0077 PA1669 PA2361
  Rso:  RSp0763
  Atu:  AGl1062
  Mlo:  mlr2349 mlr2360
_______

[M] COG3524 Capsule polysaccharide export protein
  Pmu:  PM0779
  Nme:  NMB0072
  NmA:  NMA0197
  Cje:  Cj1445c
  Sme:  SMb20831
_______

[G] COG3525 N-acetyl-beta-hexosaminidase
  Lla:  L126168
  Spn:  SP0057_2
  Vch:  VC0613 VC2217
  Xfa:  XF0847
  Atu:  AGc4704
  Sme:  SMb21160
  Ccr:  CC0447
_______

[O] COG3526 Uncharacterized protein conserved in bacteria
  Vch:  VC0982
  Pae:  PA3338
  Atu:  AGc387
  Sme:  SMc00345
  Bme:  BMEII0262
  Mlo:  mll3944
_______

[Q] COG3527 Alpha-acetolactate decarboxylase
  Mac:  MA3744 MA3746
  Cac:  CAC2967
  Lla:  L0321 L0322
  Spn:  SP1392
  Sau:  SA2007 SA2394
  Lin:  lin2099
  Bsu:  BS_alsD
  Vch:  VC1589
_______

[S] COG3528 Uncharacterized protein conserved in bacteria
  EcZ:  Z0955
  Ecs:  ECs0814
  Sty:  STM1328
  Vch:  VC1867
  Hpy:  HP0694
  jHp:  jhp0634
_______

[R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
  EcZ:  Z4708
  Ype:  YPO0192
  Sty:  STM3456
  Vch:  VC2605
  Pae:  PA0068
_______

[S] COG3530 Uncharacterized protein conserved in bacteria
  EcZ:  Z3676
  Ype:  YPO2988
  Sty:  STM2426
  Vch:  VCA0163
  Pae:  PA3612
  Rso:  RSc3333
_______

[O] COG3531 Predicted protein-disulfide isomerase
  Ype:  YPO0630 YPO0801
  Vch:  VCA0901
  Pae:  PA0058 PA0859
  Rso:  RSc0778 RSc1444
  Mlo:  mll3417
_______

[S] COG3533 Uncharacterized protein conserved in bacteria
  Tma:  TM0280
  Bha:  BH1877
  EcZ:  Z5002
  Ecs:  ECs4459
  Sty:  STM3679
  Atu:  AGpA121 AGpA122
  Sme:  SMb20631
  Mlo:  mlr2247
  Ccr:  CC2550
_______

[G] COG3534 Alpha-L-arabinofuranosidase
  Tma:  TM0281
  Cac:  CAC3436
  Bsu:  BS_abfA BS_xsa
  Bha:  BH1861 BH1874
  Atu:  AGl3408
  Sme:  SMb20924
  Mlo:  mll3591
  Ccr:  CC1422
_______

[S] COG3535 Uncharacterized conserved protein
  Pho:  PH1052
  Sso:  SSO1667 SSO1671
  Lin:  lin0474
  Bha:  BH1880 BH1883
  Atu:  AGl3523 AGl3528
  Mlo:  mll9130
_______

[S] COG3536 Uncharacterized protein conserved in bacteria
  Pae:  PA2292 PA5055
  Nme:  NMB0742
  NmA:  NMA0955
  Rso:  RSc0457
  Atu:  AGc3112
  Sme:  SMc00145
  Bme:  BMEI1018
  Mlo:  mll0540
_______

[G] COG3537 Putative alpha-1,2-mannosidase
  Mtu:  Rv0584
  MtC:  MT0612
  Lla:  L135972
  Spn:  SP2145
  Xfa:  XF0842
  Ccr:  CC0533 CC0574
_______

[S] COG3538 Uncharacterized conserved protein
  Spo:  SPAC12B10.16c
  Lla:  L133416
  Spy:  SPy1603
  Spn:  SP2144
  Lin:  lin0759 lin2121
  Bha:  BH0790
  Xfa:  XF0843
_______

[NU] COG3539 P pilus assembly protein, pilin FimA
  Eco:  fimA fimF fimG fimI sfmA sfmF sfmH
        yadC yadM yadN ybgD ycbQ ycbT ycbU
        ycbV ydeR ydeS yehD yfcP yfcQ yfcR
        yfcV ygiL yraH yraK
  EcZ:  Z0024 Z1290 Z1291 Z1292 Z1538 Z2200 Z2204
        Z2205 Z3596 Z3597 Z3598 Z3601 Z4501 Z4504
        Z4965 Z4966 Z4971 Z5220 Z5221 Z5225 ZfimA
        ZfimF ZfimG ZfimI ZsfmA ZsfmF ZsfmH ZyadC
        ZyadM ZyadN ZybgD ZycbQ ZyehD ZyraH
  Ecs:  ECs0024 ECs0139 ECs0142 ECs0145 ECs0592 ECs0595 ECs0596
        ECs0744 ECs1021 ECs1025 ECs1026 ECs1027 ECs1280 ECs2108
        ECs2109 ECs2113 ECs2917 ECs3217 ECs3218 ECs3219 ECs3222
        ECs4020 ECs4023 ECs4026 ECs4426 ECs4427 ECs4431 ECs4665
        ECs4666 ECs4670 ECs5273 ECs5274 ECs5277 ECs5278
  Ype:  YPO0700 YPO1707 YPO1710 YPO1922 YPO2759 YPO2940 YPO2945
        YPO3877 YPO4044
  Sty:  STM0021 STM0024 STM0025 STM0026 STM0174 STM0177 STM0195
        STM0198 STM0199 STM0200 STM0340 STM0543 STM0544 STM0547
        STM0548 STM2152 STM3029 STM3636 STM3637 STM3640 STM4591
        STM4592 STM4595
  Pae:  PA0992 PA2128 PA4081 PA4086 PA5284
  Xfa:  XF0077 XF0078 XF0080 XF0083
_______

[P] COG3540 Phosphodiesterase/alkaline phosphatase D
  Cgl:  Cgl2213
  Bsu:  BS_phoD
  Nos:  all0207 alr2234 alr4976
  Pae:  PA3910
  Sme:  SMc03243
  Mlo:  mll4115
  Ccr:  CC0455 CC1565
_______

[R] COG3541 Predicted nucleotidyltransferase
  Mja:  MJ0002
  Cac:  CAC1496 CAC1497
  Bsu:  BS_ycgL
  Nos:  alr0150 alr5366 asr5365
  Pae:  PA4584
  Rso:  RSc0225
  Mlo:  mll4259
_______

[S] COG3542 Uncharacterized conserved protein
  Sce:  YML079w
  Spn:  SP2081
  Sau:  SA0625
  Syn:  sll1188
  Rso:  RSp0729
  Atu:  AGl2421
  Sme:  SMc00707
  Mlo:  mlr3548
  Ccr:  CC0518
_______

[S] COG3543 Uncharacterized conserved protein
  Afu:  AF1814
  Mac:  MA4238
  Mth:  MTH906
  Cac:  CAC3455
  Atu:  AGc1449
  Bme:  BMEI0318
  Mlo:  mlr7430
_______

[S] COG3544 Uncharacterized protein conserved in bacteria
  Dra:  DR1099 DR2451
  Cgl:  Cgl2899
  Syn:  sll0788
  Nos:  all4988 all7594 all7633
  Sme:  SMa1024 SMc00921
  Mlo:  mlr5326
_______

[R] COG3545 Predicted esterase of the alpha/beta hydrolase fold
  Dra:  DR0945
  Sau:  SA1649
  Bsu:  BS_ydeN
  Bha:  BH0848
  Pae:  PA0201
  Rso:  RSc1344 RSc2317
  Atu:  AGc3379 AGl2793
  Sme:  SMc00505
  Bme:  BMEI0676 BMEI0677 BMEI1119
  Mlo:  mll0076 mll1824
  Ccr:  CC2185
_______

[P] COG3546 Mn-containing catalase
  Pya:  PAE2696
  Cac:  CAC1338 CAC2800
  Bsu:  BS_cotJC BS_ydbD BS_ydhU BS_yjqC
  Bha:  BH1069 BH2190
  Nos:  alr0998 alr3090
  EcZ:  Z1921
  Ecs:  ECs1652
  Sty:  STM1731
  Pae:  PA2185
_______

[L] COG3547 Transposase and inactivated derivatives
  Mac:  MA2071 MA2072 MA2729 MA2762 MA2907 MA3646
  Sso:  SSO0514 SSO0518 SSO0802 SSO0803 SSO0844 SSO0850 SSO1070
        SSO11277 SSO11280 SSO11909 SSO1198 SSO1237 SSO1240 SSO1386
        SSO1484 SSO1548 SSO1556 SSO1602 SSO1603 SSO1639 SSO1684
        SSO1697 SSO1699 SSO1704 SSO1708 SSO1720 SSO1722 SSO1731
        SSO1769 SSO1772 SSO1791 SSO1795 SSO1798 SSO1799 SSO1924
        SSO1926 SSO1943 SSO1951 SSO1966 SSO1971 SSO1972 SSO2312
        SSO2542 SSO2722 SSO2723 SSO2843 SSO2893 SSO2894 SSO2951
        SSO3063 SSO3075 SSO3076 SSO3077 SSO6008 SSO6659 SSO7469
        SSO7475 SSO7893 SSO7998 SSO8359 SSO8568 SSO8725 SSO8760
  Fnu:  FN0140 FN0509 FN1357 FN1676 FN1883
  Cgl:  Cgl1010
  Mtu:  Rv0797 Rv2013 Rv2014 Rv2177c Rv2424c Rv3327_1
  MtC:  MT0818 MT2069 MT2070 MT2233 MT2497 MT3430_1
  Mle:  ML0678
  Spy:  SPy0732
  Spn:  SP0455 SP0917
  Bha:  BH0434 BH0993 BH1207 BH1301 BH1548 BH3461 BH3704
        BH4041
  Nos:  all0306 all0732 all1099 all1986 all2065 all3682 all3734
        all4756 alr0249 alr1212 alr3571 alr3636
  Ype:  YPMT1.79c
  Pae:  PA0445 PA2319 PA2690 PA3434 PA3993 PA4797
  Nme:  NMB0400 NMB1552 NMB1602 NMB1625 NMB1750
  NmA:  NMA0733 NMA0772 NMA1185 NMA1800 NMA2085
  Atu:  AGpT275
  Sme:  SMa0405 SMb20636 SMb20777 SMc01098 SMc01394 SMc02779
  Mlo:  mll0969 mll1284 mll4023 mll4141 mll5386 mll5964 mll5967
        mll5981 mll6001 mll6053 mll6064 mll6066 mll6067 mll6068
        mll6112 mll8741 mll9045 mll9160 mll9195 mlr1710 mlr4143
        mlr4274 mlr5965 mlr5977 mlr5983 mlr5993 mlr5994 mlr6032
        mlr6063 mlr6069 mlr6190 mlr9002 mlr9042 msl0968 msl5966
        msl6002
  Ccr:  CC0642 CC0662_1 CC1716 CC2740 CC2816 CC2923
_______

[S] COG3548 Predicted integral membrane protein
  Mth:  MTH1490
  Dra:  DR1190
  Lla:  L102972 L111003 L118350 L142704 L85237 L8702
  Mlo:  mlr1523 mlr3426
  Ccr:  CC0228
_______

[R] COG3549 Plasmid maintenance system killer protein
  Nos:  all2924
  Vch:  VCA0391
  Hin:  HI1250
  Xfa:  XF0721 XF1709
  Sme:  SMc02461 SMc02476
  Mlo:  mlr1576
_______

[R] COG3550 Uncharacterized protein related to capsule biosynthesis enzymes
  Fnu:  FN2000
  Cgl:  Cgl1205
  Eco:  hipA
  EcZ:  ZhipA
  Ecs:  ECs2115
  Vch:  VC0815
  Hin:  HI0665 HI0666
  Nme:  NMB1761
  Rso:  RSc1446
  Atu:  AGpA166 AGpT281
  Sme:  SMa0592
  Mlo:  mll6953
  Ccr:  CC2386 CC2735 CC2770
_______

[S] COG3551 Uncharacterized protein conserved in bacteria
  Bha:  BH3369
  Pae:  PA1392
  Mlo:  mll7563
_______

[R] COG3552 Protein containing von Willebrand factor type A (vWA) domain
  Mth:  MTH1815
  Ape:  APE2221
  Mtu:  Rv0368c Rv2425c
  MtC:  MT0384 MT2498
  Rso:  RSc1465
  Sme:  SMc00516
  Mlo:  mlr0089 mlr1707
_______

[S] COG3553 Uncharacterized protein conserved in bacteria
  Vch:  VCA0233
  Pae:  PA4090
  Bme:  BMEI0721
  Mlo:  msl0164
  Ccr:  CC3690
_______

[S] COG3554 Uncharacterized protein conserved in bacteria
  Mtu:  Rv3755c
  MtC:  MT3862
  Pae:  PA1994
  Sme:  SMc03980
  Mlo:  mll3441 mlr0268
_______

[O] COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
  Nos:  all5009
  Sty:  STM4286
  Pae:  PA0936 PA4512
  Xfa:  XF2039 XF2100
  Rso:  RSc1877
  Bme:  BMEI0464 BMEI0465
  Mlo:  mll1937 mlr0331
_______

[S] COG3556 Predicted membrane protein
  Syn:  slr1186
  Pae:  PA4828
  Rso:  RSc0795
  Mlo:  mlr3174
_______

[J] COG3557 Uncharacterized domain/protein associated with RNAses G and E
  Lla:  L196206
  Spy:  SPy1608
  Spn:  SP1903
  Sau:  SA1684
  Lin:  lin1795
  Bsu:  BS_ygaC
  Bha:  BH0940
  Uur:  UU423
  Mpu:  MYPU_1770_1
_______

[S] COG3558 Uncharacterized protein conserved in bacteria
  Syn:  sll0781
  Pae:  PA5395
  Atu:  AGpA559
  Mlo:  mll3526
_______

[M] COG3559 Putative exporter of polyketide antibiotics
  Cgl:  Cgl2980
  Mtu:  Rv1217c
  MtC:  MT1255
  Lla:  L193030
  Bha:  BH1004
_______

[R] COG3560 Predicted oxidoreductase related to nitroreductase
  Sce:  YCL026c-a YCL027c-a
  Cac:  CAC3314
  Lla:  L174788
  Sau:  SA1840
  Lin:  lin2962
  Pae:  PA2575
  Nme:  NMB0292
  NmA:  NMA2195
  Atu:  AGpA287
  Bme:  BMEII0772
_______

[K] COG3561 Phage anti-repressor protein
  Cac:  CAC1945
  Lla:  L52331_1
  Spy:  SPy0946_1
  Sau:  SA1801_1
  EcZ:  Z1503 Z1818_2
  Ecs:  ECs1199_2 ECs1251 ECs1557_2
  Hin:  HI1422
  NmA:  NMA1293
_______

[M] COG3562 Capsule polysaccharide export protein
  Pmu:  PM0772
  Nme:  NMB0083
  NmA:  NMA0185
  Cje:  Cj1413c
  Sme:  SMb20824_2 SMc02269
_______

[M] COG3563 Capsule polysaccharide export protein
  Pmu:  PM0773
  Nme:  NMB0082
  NmA:  NMA0186
  Cje:  Cj1414c
  Sme:  SMb20823 SMb20834 SMb21014
_______

[S] COG3564 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0459
  MtC:  MT0475
  Bha:  BH0680
  Sme:  SMc02688
  Bme:  BMEI1745
  Mlo:  mll6637
_______

[R] COG3565 Predicted dioxygenase of extradiol dioxygenase family
  Syn:  slr1440
  Pae:  PA0817
  Atu:  AGpA700
  Mlo:  mll8263
_______

[S] COG3566 Uncharacterized protein conserved in bacteria
  Lin:  lin1728
  Hin:  HI1405
  Xfa:  XF1575 XF1680
  Mlo:  mlr8006
_______

[S] COG3567 Uncharacterized protein conserved in bacteria
  Lin:  lin1731
  Hin:  HI1409
  Xfa:  XF1571 XF1676
  Mlo:  mlr8004
_______

[R] COG3568 Metal-dependent hydrolase
  Spy:  SPy1985
  Spn:  SP0760
  Lin:  lin0348
  Eco:  ybhP
  EcZ:  ZybhP
  Ecs:  ECs0868
  Sty:  STM0813
  Pae:  PA2156 PA5488
  Xfa:  XF1438
  Rso:  RSc0469 RSc1208
  Atu:  AGc4513
  Sme:  SMb20092 SMc01813
  Bme:  BMEII0240
  Mlo:  mll3063 mlr2853 mlr4014
  Ccr:  CC0523 CC0862
_______

[L] COG3569 Topoisomerase IB
  Sce:  YOL006c_1
  Spo:  SPBC1703.14c_1
  Dra:  DR0690
  Pae:  PA2244
  Atu:  AGl1631
  Sme:  SMb21445
  Mlo:  mll2873 msl2872
_______

[V] COG3570 Streptomycin 6-kinase
  Dra:  DR0455
  Pae:  PA1858
  Atu:  AGc2291
  Sme:  SMc01228
  Mlo:  mll8451
_______

[R] COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold
  Mtu:  Rv0421c
  MtC:  MT0435
  Pae:  PA1558
  Sme:  SMb20688
  Mlo:  mll2072
_______

[H] COG3572 Gamma-glutamylcysteine synthetase
  Mtu:  Rv3704c
  MtC:  MT3807
  Spn:  SP2067
  Xfa:  XF1428
  Atu:  AGc1167
  Sme:  SMc00825
  Bme:  BMEII0528
  Mlo:  mll6902
  Ccr:  CC3414
_______

[R] COG3573 Predicted oxidoreductase
  Dra:  DRA0238
  Mtu:  Rv0785
  MtC:  MT0809
  Atu:  AGl2178
  Bme:  BMEII0610
  Mlo:  mll5046
_______

[S] COG3575 Uncharacterized protein conserved in bacteria
  Dra:  DR1959
  Lla:  L95481
  Spn:  SP0260
  Nos:  alr0472
  Ype:  YPO2986
  Vch:  VCA0380
  Atu:  AGl2367
  Mlo:  mll5052
  Ccr:  CC3222
_______

[R] COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
  Mac:  MA1554 MA2558 MA4191
  Mth:  MTH413
  Mja:  MJ0282
  Fnu:  FN1138
  Dra:  DR2398
  Mtu:  Rv2061c
  MtC:  MT2120
  Mle:  ML1446
  Spy:  SPy0844
  Nos:  all2799
  Pae:  PA3036
  Atu:  AGc1303 AGc3109 AGl779 AGpA816
  Sme:  SMb20006 SMc00148
  Mlo:  mll0539 mll3525 mlr4322
  Ccr:  CC2577
_______

[R] COG3577 Predicted aspartyl protease
  Pae:  PA4048 PA4965
  Atu:  AGc215 AGc3474
  Sme:  SMc04217
  Bme:  BMEI1102
  Mlo:  mll3161 mlr0565
  Ccr:  CC1307
  Rpr:  RP867
  Rco:  RC1339
_______

[E] COG3579 Aminopeptidase C
  Sce:  YNL239w
  Lla:  L130687
  Spy:  SPy1651
  Spn:  SP0281
  Lin:  lin2432
  Tpa:  TP0112
_______

[S] COG3580 Uncharacterized protein conserved in bacteria
  Aae:  aq_277
  Tma:  TM0482_2
  Fnu:  FN1139_2
  Cac:  CAC2401_2 CAC2426
  Lla:  L104115_2
  Lin:  lin0781_2
_______

[S] COG3581 Uncharacterized protein conserved in bacteria
  Aae:  aq_276
  Tma:  TM0482_3
  Fnu:  FN1140
  Cac:  CAC2401_3 CAC2427
  Lla:  L104115_3
  Lin:  lin0781_3
_______

[R] COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger
  Afu:  AF1011_1 AF1187_1 AF1454
  Hbs:  VNG0361C_1
  Sce:  YNL155w YOR052c
  Spo:  SPBC1271.05c
_______

[S] COG3583 Uncharacterized protein conserved in bacteria
  Cac:  CAC2988_1
  Cgl:  Cgl0885_1
  Mtu:  Rv1009_1
  MtC:  MT1038_1
  Mle:  ML0240_1
  Lin:  lin0225_1
  Bsu:  BS_yabE_1
  Bha:  BH0055_1
_______

[S] COG3584 Uncharacterized protein conserved in bacteria
  Tma:  TM0568_2
  Dra:  DR0488
  Cac:  CAC2045_2 CAC2988_2 CAC3033_2
  Lla:  L188798_2
  Lin:  lin0225_2 lin2666_2
  Bsu:  BS_yabE_2 BS_yocH_2 BS_yorM BS_yuiC
  Bha:  BH0055_2 BH3322_2 BH3404
_______

[H] COG3585 Molybdopterin-binding protein
  Mac:  MA1238 MA1239
  Nos:  all5177 asr1428
  Pae:  PA3441
  Hin:  HI1370
  Pmu:  PM0216
  Rso:  RSc1342
  Mlo:  msr1466
_______

[S] COG3586 Uncharacterized conserved protein
  Mac:  MA2417_2
  EcZ:  Z5943m_2
  Ecs:  ECs5305_2
  Hin:  HI1375_2
  Hpy:  HP0513_2
  jHp:  jhp0462_2
  Bme:  BMEII0447_2
_______

[V] COG3587 Restriction endonuclease
  Fnu:  FN0417
  Sty:  STM0358
  Pmu:  PM0699
  Nme:  NMB1260
  NmA:  NMA1466
  Hpy:  HP0592 HP1521
  jHp:  jhp1410
_______

[G] COG3588 Fructose-1,6-bisphosphate aldolase
  Ecu:  ECU01g0240
  Fnu:  FN0322
  Cac:  CAP0064
  Sau:  SA2399
  Syn:  slr0943
  Xfa:  XF0826
  Atu:  AGl2190
  Sme:  SMc03983
  Mlo:  mlr3754
_______

[S] COG3589 Uncharacterized conserved protein
  Sso:  SSO1272
  Lla:  L143292 L176316
  Spy:  SPy1326
  Sau:  SA0184
  Lin:  lin1829
  Bha:  BH3573
  Bbu:  BBB07
_______

[O] COG3590 Predicted metalloendopeptidase
  Mac:  MA2001
  Cgl:  Cgl0154
  Mtu:  Rv0198c
  MtC:  MT0208
  Mle:  ML2613
  Lla:  L49741
  Spy:  SPy2095
  Spn:  SP1647
  Xfa:  XF0576
  Ccr:  CC3504
_______

[E] COG3591 V8-like Glu-specific endopeptidase
  Spn:  SP0390_1
  Sau:  SA0901 SA1627 SA1628 SA1629 SA1630 SA1631 SA2382
        SA2389
  Bsu:  BS_mpr
  Eco:  ydgD
  EcZ:  Z2592
  Ecs:  ECs2304
  Ype:  YPO2319
  Sty:  STM1484
  Sme:  SMc03769_2
  Mlo:  mll3306 mll6878
_______

[S] COG3592 Uncharacterized conserved protein
  Mac:  MA1680_2
  Lla:  L86826
  Lin:  lin0180
  Eco:  yjdI
  EcZ:  ZyjdI
  Ecs:  ECs5108
  Mlo:  mlr4660_1
_______

[L] COG3593 Predicted ATP-dependent endonuclease of the OLD family
  Mac:  MA1866 MA2139
  Mja:  MJECL35
  Fnu:  FN0185
  Syn:  slr1056
  Eco:  ybjD
  EcZ:  ZybjD
  Ecs:  ECs0962
  Ype:  YPO1362
  Sty:  STM0939
  Vch:  VCA0544
  Pae:  PA1939
  Pmu:  PM0466
  Atu:  AGpA32
  Mlo:  mlr8165
_______

[G] COG3594 Fucose 4-O-acetylase and related acetyltransferases
  Mac:  MA2661
  Cac:  CAC3041 CAC3042
  Sau:  SA0903
  Lin:  lin0994
  Bsu:  BS_ykrP
  Pae:  PA2242
  Xfa:  XF2365
  Mlo:  mll4680 mlr0961 mlr8757
_______

[S] COG3595 Uncharacterized conserved protein
  Pho:  PH1099
  Pab:  PAB0753
  Cac:  CAC0573
  Lla:  L157995
  Lin:  lin0610 lin2629_2 lin2630
  Bsu:  BS_yvlB BS_yvqG
  Bha:  BH1197 BH1484 BH3593
  Ype:  YPO1174
_______

[R] COG3596 Predicted GTPase
  Syn:  slr1428_2
  Nos:  all4820_2
  Eco:  yeeP yfjP ykfA
  EcZ:  Z1210 Z1650
  Ecs:  ECs1395
  Vch:  VC1806
  NmA:  NMA0131 NMA0132
  jHp:  jhp0681_1
_______

[S] COG3597 Uncharacterized protein/domain associated with GTPases
  Dra:  DR2057
  Lla:  L62955
  Syn:  slr1413_2
  Nos:  all3530_2
  jHp:  jhp0681_2
_______

[L] COG3598 RecA-family ATPase
  Aae:  aq_aa20
  Spy:  SPy0671
  Xfa:  XF0633
  Mlo:  mlr5464
_______

[D] COG3599 Cell division initiation protein
  Dra:  DR1369
  Cac:  CAC2118
  Cgl:  Cgl2024 Cgl2100
  Mtu:  Rv2145c Rv2927c
  MtC:  MT2204 MT2997
  Mle:  ML0922 ML1661
  Lla:  L102051 L117685
  Spy:  SPy1514 SPy1646
  Spn:  SP0372 SP1661
  Sau:  SA1035 SA1279
  Lin:  lin2002 lin2128
  Bsu:  BS_divIVA BS_ypsB
  Bha:  BH1769 BH2546
  Syn:  slr0848
  Nos:  alr4701
  Mpu:  MYPU_3050
_______

[S] COG3600 Uncharacterized phage-associated protein
  Cgl:  Cgl0313
  Lla:  L197116
  Xfa:  XF0537 XF1793 XF2107
  Bme:  BMEII0458
  Ccr:  CC3515
  Uur:  UU033
_______

[S] COG3601 Predicted membrane protein
  Pho:  PH0251
  Pab:  PAB2198
  Tma:  TM1455
  Cac:  CAC2841
  Lla:  L106755
  Spy:  SPy0373
  Spn:  SP0488
  Sau:  SA1316
  Lin:  lin2059
  Bsu:  BS_ypaA
_______

[S] COG3602 Uncharacterized protein conserved in bacteria
  Vch:  VC0802
  Pae:  PA4364
  Sme:  SMc01649
  Mlo:  mlr4389
  Ccr:  CC1852
_______

[S] COG3603 Uncharacterized conserved protein
  Afu:  AF1477
  Mac:  MA2818
  Dra:  DR1715
  Atu:  AGc1340
  Sme:  SMc01439
  Mlo:  mll2220
_______

[KT] COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
  Aae:  aq_1792 aq_218
  Eco:  fhlA hyfR ygaA
  EcZ:  ZfhlA ZhyfR ZygaA
  Ecs:  ECs3353 ECs3565 ECs3587
  Sty:  STM2839 STM2859
  Vch:  VCA0182
  Pae:  PA1663 PA2665
  Rso:  RSp0959
  Sme:  SMa0815
  Mlo:  mll5837 mll5857
  Tpa:  TP0082
_______

[T] COG3605 Signal transduction protein containing GAF and PtsI domains
  Eco:  ptsP
  EcZ:  ZptsP
  Ecs:  ECs3686
  Ype:  YPO0785
  Sty:  STM3003
  Vch:  VC0672
  Pae:  PA0337
  Atu:  AGl1355
  Sme:  SMc02437
  Bme:  BMEI0190
  Mlo:  mll3436
  Ccr:  CC0849
_______

[R] COG3607 Predicted lactoylglutathione lyase
  Cgl:  Cgl0916
  Lla:  L151700
  Sau:  SA2361
  Lin:  lin2531
  Bha:  BH3119
  Atu:  AGc4920
  Sme:  SMc01879
  Mlo:  mll4832
_______

[R] COG3608 Predicted deacylase
  Hbs:  VNG2106G
  Mth:  MTH1253 MTH852
  Mka:  MK1596
  Vch:  VC2282
  Pae:  PA0891
  Atu:  AGl249 AGpA335
  Sme:  SMb20435 SMc00388
  Bme:  BMEI1635
  Mlo:  mll1994 mlr2771 mlr6093 mlr7142
_______

[K] COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
  Afu:  AF0569
  Hbs:  VNG0194H VNG2268H
  Mac:  MA0055
  Mja:  MJ1679
  Tac:  Ta0550m
  Tvo:  TVN0604
  Pho:  PH0468 PHS024
  Pab:  PAB1754 PAB2324
  Pya:  PAE1443 PAE1484 PAE1544 PAE2133
  Sso:  SSO5826
  Ape:  APES055
  Mtu:  Rv1960c
  MtC:  MT2009
  Nos:  asr7363
  EcZ:  Z0509
  Ecs:  ECs0461
  Ype:  YPCD1.09c
  Sty:  STM2955
  Xfa:  XF2071
  Rso:  RSc3225
  Atu:  AGc1484 AGc1512 AGc1994 AGc2413 AGc2786
  Sme:  SMa1413 SMa2275 SMb20062 SMb20121 SMc00693
  Mlo:  mll2207 mlr1300 mlr9190 mlr9262 msl3422
  Ccr:  CC0874 CC2985
_______

[S] COG3610 Uncharacterized conserved protein
  Mth:  MTH749_2
  Sce:  YJL108c_2
  Spo:  SPAC16A10.01_2 SPAC7D4.12c_2
  Fnu:  FN0780
  Cac:  CAC2266
  Cgl:  Cgl2571_2
  Mtu:  Rv3737_2
  MtC:  MT3842_2
  Spn:  SP1730
  Sau:  SA0542 SA0699
  Lin:  lin0586
  Bha:  BH0082
  Eco:  yjjB
  EcZ:  ZyjjB
  Ecs:  ECs5323
  Ype:  YPO0485
  Sty:  STM4545
  Vch:  VC0439
  Hin:  HI0108_2
  Pmu:  PM1894
  Xfa:  XF1304_2
  Cje:  Cj1165c
_______

[L] COG3611 Replication initiation/membrane attachment protein
  Lla:  L157908
  Spy:  SPy0339
  Spn:  SP1712
  Sau:  SA1508
  Lin:  lin1596
  Bsu:  BS_dnaB
  Bha:  BH3145
  Uur:  UU308
  Mpn:  MPN525
  Mge:  MG349
_______

[S] COG3612 Uncharacterized protein conserved in archaea
  Afu:  AF1194
  Hbs:  VNG1670C
  Mac:  MA0593
  Tac:  Ta0459
  Tvo:  TVN0780
_______

[F] COG3613 Nucleoside 2-deoxyribosyltransferase
  Mac:  MA3568
  Spo:  SPCC191.05c
  Lla:  L92464
  Pae:  PA0144 PA0145
  Rso:  RSc0745
  Atu:  AGl1489
  Mlo:  mll6424_2
  Ccr:  CC2117
  Bbu:  BB0426
  Uur:  UU063
_______

[T] COG3614 Predicted periplasmic ligand-binding sensor domain
  Dra:  DR1174_1
  Syn:  sll0267_1
  Vch:  VC1376_1
  Pae:  PA4112_1
  Mlo:  mll3709_1
_______

[P] COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance
  Spn:  SP0977_1
  Eco:  yeaR
  EcZ:  ZyeaR
  Ecs:  ECs2506
  Ype:  YPO1949_1
  Sty:  STM1271 STM1808
  Hin:  HI1275_1
  Pmu:  PM0656_1
  Nme:  NMB1617_1
  NmA:  NMA1816_1
_______

[E] COG3616 Predicted amino acid aldolase or racemase
  Sce:  YGL196w
  Spo:  SPAC1039.06
  Fnu:  FN0552
  Cgl:  Cgl2558
  Mtu:  Rv1413 Rv1414 Rv1769
  MtC:  MT1457 MT1820
  Pae:  PA5326
  Rso:  RSc2709 RSp1185
  Atu:  AGl1808 AGl1837 AGpA328
  Sme:  SMb21134
  Bme:  BMEII0546
  Mlo:  mll6666 mll8328 mlr8208
  Ccr:  CC3106
_______

[K] COG3617 Prophage antirepressor
  Lla:  L51420_1
  Spy:  SPy0980_1 SPy2127 SPy2128
  Lin:  lin0080_1 lin2418_1
  EcZ:  Z1818_1
  Ecs:  ECs1557_1
  Ype:  YPO2093 YPO2126
  Pae:  PA1153 PA2423
  Hin:  HI1418
  Xfa:  XF0684_1 XF0704 XF1645 XF1663_1 XF2506_2 XF2524_1
  Bme:  BMEI0899 BMEI1663
_______

[R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold
  Ype:  YPO1933
  Pae:  PA2211
  Rso:  RSp0233
  Cje:  Cj0487 Cj0556
  Atu:  AGc5105 AGl2610 AGl3341
  Sme:  SMb21101
  Bme:  BMEI1718
  Mlo:  mll5767 mlr1708 mlr7156
_______

[S] COG3619 Predicted membrane protein
  Mac:  MA1282
  Fnu:  FN2084
  Cac:  CAC3362
  Mtu:  Rv0128
  MtC:  MT0136
  Lla:  L122299 L131806
  Spy:  SPy0421
  Spn:  SP1104
  Lin:  lin0467
  Bsu:  BS_yoaK
  Syn:  slr0142
  Pae:  PA0255
  Rso:  RSc0238
  Atu:  AGc254
  Sme:  SMa1162 SMa1297
  Bme:  BMEI0217
  Mlo:  mlr1837 msr1838
_______

[K] COG3620 Predicted transcriptional regulator with C-terminal CBS domains
  Afu:  AF2118
  Hbs:  VNG0878Gm
  Mac:  MA1815
  Tac:  Ta0106
  Tvo:  TVN0185
  Pho:  PH1748
  Pab:  PAB0211
_______

[R] COG3621 Patatin
  Bsu:  BS_yvdO
  Nos:  all2302
  Vch:  VC0178
  Rpr:  RP602
  Rco:  RC0922
_______

[G] COG3622 Hydroxypyruvate isomerase
  Cgl:  Cgl2056 Cgl2419
  Eco:  gip ygbM
  EcZ:  Zgip
  Ecs:  ECs0569
  Ype:  YPO1238
  Sty:  STM0518 STM2915
  Pae:  PA0550 PA1501
  Hin:  HI1013
  Pmu:  PM1363
  Rso:  RSc0020 RSc3282
  Sme:  SMb20669 SMb20680
  Bme:  BMEII1092
  Mlo:  mll1001 mlr0252 mlr7629
_______

[G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase
  Spy:  SPy0178
  Spn:  SP2034
  Eco:  sgaU sgbU
  EcZ:  ZsgaU
  Ecs:  ECs5173
  Ype:  YPO3333
  Sty:  STM3676 STM4387
  Vch:  VCA0241
  Hin:  HI1026
  Pmu:  PM1245
  Mpu:  MYPU_5980
  Mpn:  MPN492
_______

[P] COG3624 Uncharacterized enzyme of phosphonate metabolism
  Nos:  all2225
  Eco:  phnG
  EcZ:  ZphnG
  Ecs:  ECs5084
  Ype:  YPO3457
  Pae:  PA3380
  Atu:  AGc303
  Sme:  SMb20759
  Mlo:  mll9155 mlr3342 mlr9277
_______

[P] COG3625 Uncharacterized enzyme of phosphonate metabolism
  Nos:  all2224
  Eco:  phnH
  EcZ:  ZphnH
  Ecs:  ECs5083
  Ype:  YPO3458
  Pae:  PA3379
  Atu:  AGc302
  Sme:  SMb20760
  Mlo:  mll9154 mlr3343 mlr9279
_______

[P] COG3626 Uncharacterized enzyme of phosphonate metabolism
  Nos:  all2222
  Eco:  phnI
  EcZ:  ZphnI
  Ecs:  ECs5082
  Ype:  YPO3459
  Pae:  PA3378
  Atu:  AGc299
  Sme:  SMb20761
  Mlo:  mll9153 mlr3344 mlr9280
_______

[P] COG3627 Uncharacterized enzyme of phosphonate metabolism
  Nos:  all2219
  Eco:  phnJ
  EcZ:  ZphnJ
  Ecs:  ECs5081
  Ype:  YPO3460
  Pae:  PA3377
  Atu:  AGc297
  Sme:  SMb20762
  Mlo:  mll9152 mlr3346 mlr9282
_______

[R] COG3628 Phage baseplate assembly protein W
  Nos:  all3318
  Ype:  YPO1880
  Sty:  STM2709 STM4203
  Pae:  PA0617
  Xfa:  XF0723 XF2489
  Rso:  RSc1924
  Mlo:  mlr6561
_______

[T] COG3629 DNA-binding transcriptional activator of the SARP family
  Tma:  TM1119
  Fnu:  FN0647 FN1400_1
  Mtu:  Rv1267c_1 Rv3124
  MtC:  MT1305_1 MT3208 MT3428_1
  Spy:  SPy2091_1
  Atu:  AGl2522_1
  Sme:  SMc01543_1
  Mlo:  mll4650_1 mlr2433_1 mlr7075_1
_______

[C] COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit
  Afu:  AF2086
  Pho:  PH1285
  Pab:  PAB1770
  Sty:  STM0056 STM0766 STM3353
  Vch:  VC0549 VC0794
  Pmu:  PM1421
  Tpa:  TP0055
_______

[R] COG3631 Ketosteroid isomerase-related protein
  Hbs:  VNG0367H VNG2074H
  Mac:  MA0991
  Dra:  DR1340
  Mtu:  Rv0034 Rv0141c
  MtC:  MT0039 MT0149
  Bsu:  BS_yesE
  Pae:  PA1817 PA3332
  Atu:  AGl27 AGl30 AGl39
  Mlo:  mll3824 mlr2636 mlr5282
  Ccr:  CC2144
_______

[E] COG3633 Na+/serine symporter
  Spy:  SPy0324
  Eco:  sstT
  EcZ:  ZygjU
  Ecs:  ECs3971
  Ype:  YPO0584
  Sty:  STM3225
  Vch:  VCA0036
  Pae:  PA2042
  Hin:  HI1545
  Pmu:  PM0891
  Nme:  NMB2133
  NmA:  NMA0298
  Cje:  Cj1097
_______

[O] COG3634 Alkyl hydroperoxide reductase, large subunit
  Lla:  L135954
  Spy:  SPy2080
  Sau:  SA0365
  Bsu:  BS_ahpF
  Eco:  ahpF
  EcZ:  ZahpF
  Ecs:  ECs0645
  Sty:  STM0609
  Pae:  PA0140
  Xfa:  XF1531
  Rso:  RSp0246
  Ccr:  CC2919
_______

[G] COG3635 Predicted phosphoglycerate mutase, AP superfamily
  Afu:  AF1425 AF1751
  Mac:  MA0132
  Mth:  MTH1591 MTH418
  Mja:  MJ0010 MJ1612
  Mka:  MK1193
  Tac:  Ta0413
  Tvo:  TVN1158
  Pho:  PH0037
  Pab:  PAB2318
  Pya:  PAE2326
  Sso:  SSO0417
  Ape:  APE1616
  Aae:  aq_542
  Tma:  TM1774
  Dra:  DR2227
_______

[K] COG3636 Predicted transcriptional regulator
  Ype:  YPO1088
  Hin:  HI1420
  Xfa:  XF1596 XF1702 XF2763 XFa0046
  Rso:  RSp0076
  Sme:  SMc00178_2
  Ccr:  CC3037
_______

[M] COG3637 Opacity protein and related surface antigens
  Eco:  b1369 b1371 ompX
  EcZ:  Z1381 Z1917 Z2146 Z2342 Z2343 Z3310 Z4321
        ZlomK ZlomP ZlomU ZlomW ZompX
  Ecs:  ECs0843 ECs0892 ECs1122 ECs1236 ECs1649 ECs1807 ECs1991
        ECs2160 ECs2232 ECs2718 ECs2942 ECs3850
  Ype:  YPO1860 YPO2190 YPO2506 YPO2905
  Sty:  PSLT009 STM0306 STM0346 STM0833 STM0920 STM1043 STM1246
        STM3031
  Hin:  HI0414 HI1174 HI1457
  Pmu:  PM1025
  Nme:  NMB0663
  NmA:  NMA0862
  Atu:  AGc2092 AGc3918 AGc4604 AGl2258
  Sme:  SMc00257 SMc00604 SMc00638 SMc00639
  Bme:  BMEI0345 BMEI0402 BMEI0717 BMEI1007 BMEI1249 BMEI1829 BMEI1830
        BMEII0376 BMEII0844
  Mlo:  mll0155 mll0361 mll1390 mll2060 mll3877 mll3878 mll5677
        mll7908 mlr0810
  Ccr:  CC0747_1 CC3494_1
  Rpr:  RP827 RP828
  Rco:  RC1281 RC1282
_______

[P] COG3638 ABC-type phosphate/phosphonate transport system, ATPase component
  Hbs:  VNG2085G
  Fnu:  FN1136
  Cgl:  Cgl1425
  Lla:  L97415
  Sau:  SA0137
  Bha:  BH0440 BH0469 BH2974
  Nos:  all2230 all2357 all8090
  Eco:  phnC
  EcZ:  ZphnC
  Ecs:  ECs5088
  Ype:  YPO1182
  Pae:  PA3314 PA3384
  Atu:  AGc290
  Sme:  SMb21177
  Mlo:  mlr3353
  Ccr:  CC0361
  Mpu:  MYPU_1070 MYPU_2240
_______

[P] COG3639 ABC-type phosphate/phosphonate transport system, permease component
  Hbs:  VNG2084G
  Pya:  PAE2697
  Fnu:  FN1137
  Cgl:  Cgl1423 Cgl1424
  Lla:  L98204 L99004
  Sau:  SA0135 SA0136
  Bha:  BH0441 BH0442 BH0470 BH2975 BH2976
  Nos:  all2227 all2356 all8088
  Eco:  b4103 phnE
  EcZ:  ZphnE
  Ecs:  ECs5086
  Ype:  YPO1184 YPO1185
  Pae:  PA3315 PA3316 PA3382
  Atu:  AGc284 AGc285
  Sme:  SMb21174 SMb21175
  Mlo:  mlr3356 mlr3358 mlr3359
  Ccr:  CC0363
  Mpu:  MYPU_1080 MYPU_2180
  Mpn:  MPN417
  Mge:  MG291
_______

[D] COG3640 CO dehydrogenase maturation factor
  Afu:  AF0378 AF1685
  Mac:  MA1013 MA1021 MA1340 MA1967 MA2780 MA3449 MA3863
  Mth:  MTH1120 MTH1711 MTH571
  Mja:  MJ0084 MJ0685 MJ0823
  Mka:  MK0721 MK0726
_______

[R] COG3641 Predicted membrane protein, putative toxin regulator
  Fnu:  FN1900
  Spy:  SPy0851 SPy1169
  Sau:  SA1676 SA2357
  Lin:  lin2249
  Bha:  BH3254
  Tpa:  TP0038
_______

[T] COG3642 Mn2+-dependent serine/threonine protein kinase
  Afu:  AF0665
  Hbs:  VNG2045G_2
  Mac:  MA3705_2
  Mth:  MTH1425_2
  Mja:  MJ1130_2
  Mka:  MK1456
  Tac:  Ta0324_2
  Tvo:  TVN1276_2
  Pho:  PH0445
  Pab:  PAB1047
  Pya:  PAE2192
  Sso:  SSO0433
  Ape:  APE1136
  Sce:  YGR262c
  Spo:  SPAP27G11.07c
  Ecu:  ECU06g0400
_______

[E] COG3643 Glutamate formiminotransferase
  Tac:  Ta1476
  Tvo:  TVN0091
  Tma:  TM0843
  Fnu:  FN0741 FN1407
  Spy:  SPy2083
_______

[S] COG3644 Uncharacterized protein conserved in bacteria
  Dra:  DR0045
  Pae:  PA3765
  Rso:  RSp1214
  Ccr:  CC2024
_______

[S] COG3645 Uncharacterized phage-encoded protein
  Lla:  L51420_2
  Spy:  SPy0946_2 SPy0980_2
  Sau:  SA1801_2
  Lin:  lin0080_2 lin1260_2 lin1738_2 lin2418_2
  Bsu:  BS_yoqD_2
  EcZ:  Z1457_2 Z1797
  Ecs:  ECs1200_2
  Ype:  YPO2100
_______

[S] COG3646 Uncharacterized phage-encoded protein
  Lla:  L42465 L6094
  Spn:  SP1134
  Lin:  lin1260_1 lin1738_1
  Bsu:  BS_yoqD_1
  EcZ:  Z1457_1
  Ecs:  ECs1200_1
  Hin:  HI1412
  Pmu:  PM1774
_______

[S] COG3647 Predicted membrane protein
  Eco:  yjdF
  EcZ:  ZyjdF
  Ecs:  ECs5103
  Vch:  VCA0789
  Pmu:  PM1879
_______

[Q] COG3648 Uricase (urate oxidase)
  Spo:  SPCC1223.09
  Dra:  DR1160
  Bsu:  BS_yunL_2
  Bha:  BH0759
_______

[L] COG3649 Uncharacterized protein predicted to be involved in DNA repair
  Tma:  TM1801
  Spy:  SPy1564
  Bha:  BH0339
_______

[S] COG3650 Predicted membrane protein
  Nos:  all4315
  Vch:  VC0132
  Pae:  PA1064
  Ccr:  CC3627
_______

[S] COG3651 Uncharacterized protein conserved in bacteria
  Mtu:  Rv3745c
  MtC:  MT3853
  Syn:  slr1628
  Nos:  alr4270
  Ccr:  CC3660
_______

[S] COG3652 Predicted outer membrane protein
  Dra:  DR1385
  Pae:  PA2109 PA2134
  Sme:  SMb20223 SMb20593
  Mlo:  mll8139
  Ccr:  CC3563
_______

[Q] COG3653 N-acyl-D-aspartate/D-glutamate deacylase
  Pab:  PAB0090
  Mtu:  Rv2913c
  MtC:  MT2981
  Rso:  RSp1187
  Ccr:  CC3460
_______

[R] COG3654 Prophage maintenance system killer protein
  Spn:  SP0889
  Nos:  alr9029
  Ype:  YPO1833
  Sty:  STM3558
  Vch:  VCA0475
  Pae:  PA0053
  Nme:  NMB0917
  Bme:  BMEI1376
  Ccr:  CC3363
  Mpu:  MYPU_4040
_______

[K] COG3655 Predicted transcriptional regulator
  Cac:  CAC1950 CAC2552
  Cgl:  Cgl1264
  Spy:  SPy0544
  Spn:  SP1030
  Lin:  lin1448
  Bsu:  BS_yozG
  Bha:  BH3993
  Nos:  all7137 alr7292
  Pae:  PA2785 PA5403
  Ccr:  CC0150 CC3270 CC3282
_______

[S] COG3656 Predicted periplasmic protein
  Dra:  DR1793
  Xfa:  XF0596
  Ccr:  CC3060
_______

[S] COG3657 Uncharacterized protein conserved in bacteria
  Nos:  all2402
  Ype:  YPO1087
  Hin:  HI1419
  Xfa:  XF1597 XF1703 XF2764 XFa0045
  Rso:  RSp0077
  Sme:  SMc00178_1
  Ccr:  CC3038
_______

[C] COG3658 Cytochrome b
  Vch:  VCA0716
  Nme:  NMB1158 NMB1196
  NmA:  NMA1368
  Rso:  RSc2354
  Ccr:  CC2922
_______

[M] COG3659 Carbohydrate-selective porin
  Syn:  slr1163
  Pae:  PA2291 PA3186 PA4099
  Rso:  RSp1632
  Ccr:  CC2888
_______

[M] COG3660 Predicted nucleoside-diphosphate-sugar epimerase
  Xfa:  XF1838
  Sme:  SMb20562
  Ccr:  CC2849
  Rpr:  RP120
  Rco:  RC0162
_______

[G] COG3661 Alpha-glucuronidase
  Tma:  TM0055
  Bha:  BH1061
  Ccr:  CC2811
_______

[S] COG3662 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0276 Rv0826 Rv1645c Rv2237
  MtC:  MT0288 MT0848 MT1683 MT2296
  Pae:  PA4734
  Rso:  RSp1255
  Ccr:  CC2570
_______

[L] COG3663 G:T/U mismatch-specific DNA glycosylase
  Mac:  MA0462
  Spo:  SPCC965.05c
  Dra:  DR0715
  Eco:  ygjF
  EcZ:  ZygjF
  Ecs:  ECs3951
  Sty:  STM3212
  Pmu:  PM0751
  Nme:  NMB0698
  NmA:  NMA0903
  Rso:  RSc0991
  Cje:  Cj1254
  Ccr:  CC2489
_______

[G] COG3664 Beta-xylosidase
  Sau:  SA0097_2
  Lin:  lin2953_2
  Bha:  BH1068
  Pae:  PA2237
  Sme:  SMb20251
  Ccr:  CC2357
_______

[S] COG3665 Uncharacterized conserved protein
  Spo:  SPAC11D3.03c
  Dra:  DR0613
  Bsu:  BS_ycgI
  Atu:  AGc2528
  Sme:  SMc04148_1
  Ccr:  CC1827 CC1828
_______

[L] COG3666 Transposase and inactivated derivatives
  Mac:  MA0472 MA0944 MA1045 MA1047 MA1052 MA1986 MA2564
        MA2566 MA2680 MA2770 MA2800 MA2820 MA2823 MA3313
        MA3352 MA3355 MA3504 MA3799 MA4227 MA4462
  Fnu:  FN0028 FN0372 FN0403 FN0529 FN1339 FN1511 FN1815
  Cac:  CAC0656 CAC0657
  Spy:  SPy2013
  Spn:  SP1806
  Sau:  SA1038 SA1222 SA1603 SA1604 SA1605 SAS055
  Bha:  BH0275 BH0457 BH0682 BH0765 BH0829 BH0981 BH1054_1
        BH1427 BH1901 BH1904 BH2070 BH2152 BH2696 BH2841
        BH3189 BH3437 BH3609 BH3635 BH3985 BH4005 BH4006
  Nos:  alr7249 alr9024 asl9022
  Pae:  PA0691 PA1368
  Atu:  AGpA136
  Sme:  SMa1787
  Ccr:  CC0273 CC1796
_______

[P] COG3667 Uncharacterized protein involved in copper resistance
  Pae:  PA2064
  Xfa:  XF0133
  Rso:  RSp0657
  Ccr:  CC0965
_______

[R] COG3668 Plasmid stabilization system protein
  Dra:  DR2560
  Mtu:  Rv1959c
  MtC:  MT2008
  Nos:  all7155
  EcZ:  Z0510
  Ecs:  ECs0462 ECs1067 ECs2281
  Ype:  YPCD1.08c
  Vch:  VCA0311 VCA0348 VCA0359 VCA0385 VCA0423 VCA0489 VCA0503
  Pae:  PA0124 PA0729 PA4877
  Xfa:  XF2032 XF2066 XF2070 XF2074 XFa0029
  Rso:  RSc3224
  Atu:  AGc1483 AGc1518 AGc1993 AGc2415 AGc2785 AGc3278 AGl815
        AGpA390 AGpA545
  Sme:  SMa0473 SMa0572 SMa1770 SMa2273 SMb20063 SMb20627 SMc00694
        SMc04313
  Bme:  BMEI1526
  Mlo:  msl3420 msr1301 msr9191 msr9263
  Ccr:  CC0802 CC0873 CC2513 CC2756 CC2880 CC2984 CC3131
_______

[G] COG3669 Alpha-L-fucosidase
  Sso:  SSO11867 SSO3060
  Tma:  TM0306
  Spn:  SP2146
  Xfa:  XF0106 XF2714
  Ccr:  CC0795
_______

[Q] COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes
  Mtu:  Rv0654 Rv0913c
  MtC:  MT0683 MT0938
  Syn:  sll1541 slr1648
  Nos:  all1106 all4284 all4895
  Rso:  RSp0212
  Ccr:  CC0333 CC0776
_______

[S] COG3671 Predicted membrane protein
  Nme:  NMB1027_2
  NmA:  NMA1461_2
  Rso:  RSc2943
  Ccr:  CC0411 CC0412
  Rpr:  RP798
  Rco:  RC1232
_______

[S] COG3672 Predicted periplasmic protein
  Vch:  VCA1081
  Pae:  PA1434
  Atu:  AGc3225 AGc433 AGc4449 AGl1020 AGl2583
  Sme:  SMc00360 SMc00998 SMc04352
  Bme:  BMEI0737 BMEI1993 BMEII0269
  Mlo:  mll0183 mll4550 mll7484 mlr0118
  Ccr:  CC0167
_______

[S] COG3673 Uncharacterized conserved protein
  Sce:  YEL023c
  Pae:  PA2063
  Ccr:  CC2696_1
_______

[I] COG3675 Predicted lipase
  Sce:  YJR107w
  Syn:  sll0482
  Vch:  VC1418 VCA0754
_______

[L] COG3676 Transposase and inactivated derivatives
  Hbs:  VNG0918H_2 VNG7107_2
  Hin:  HI1328.1 HI1329 HI1577
  Nme:  NMB0522 NMB0583 NMB0616 NMB0969 NMB1401 NMB1411 NMB1769
  NmA:  NMA0022 NMA0175 NMA0176 NMA0344 NMA0344A NMA0471 NMA0554
        NMA0664 NMA0664a NMA0769 NMA1487 NMA1543 NMA1600 NMA1621
        NMA1907 NMA1907A NMA1956 NMA2185
_______

[L] COG3677 Transposase and inactivated derivatives
  Hbs:  VNG0918H_1 VNG7107_1
  Mac:  MA1315 MA1650 MA1879 MA2162 MA2470 MA2734 MA2785
        MA2946 MA3005 MA3222 MA3311 MA3375 MA3511 MA3848
        MA4108 MA4225
  Pho:  PH1854
  Pab:  PAB2064
  Sso:  SSO0509 SSO0511_1 SSO0541_1 SSO1436_1 SSO1654_1 SSO2242 SSO2320_1
        SSO2898 SSO2950_1 SSO8684 SSO8685
  Cac:  CAC1493 CAC1597
  Syn:  sll1156 slr1902 slr2095
  Eco:  insA_g1 insA_g2 insA_g3 insA_g6 insA_g5 insA_g7
  EcZ:  Z1122 Z1561
  Ecs:  ECs1373
  Ype:  YPO0964 YPO0968 YPO0981
  Sty:  STM0861_1
  Rso:  RSc0889 RSc3179
_______

[UNTP] COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
  Syn:  sll0858
  Nos:  alr4637
  Eco:  spy yiiO zra
  EcZ:  Zspy ZyiiO ZyjaI
  Ecs:  ECs2449 ECs4839 ECs4925
  Ype:  YPO0075
  Sty:  STM0307 STM1308 STM4060 STM4172
  Vch:  VC2691
  Pae:  PA3205
  NmA:  NMA1414
  Rso:  RSp1160
  Sme:  SMb21562
_______

[S] COG3679 Uncharacterized conserved protein
  Afu:  AF1058
  Hbs:  VNG0853C
  Lla:  L162952
  Spy:  SPy0811
  Spn:  SP1372
  Sau:  SA0968 SA1663
  Lin:  lin2161 lin2326
  Bsu:  BS_yheA BS_ylbF
  Bha:  BH1149 BH2596
_______

[S] COG3680 Uncharacterized protein conserved in bacteria
  Dra:  DR1144
  EcZ:  Z0319
  Ecs:  ECs0285
  Nme:  NMB1580
  NmA:  NMA1769
_______

[S] COG3681 Uncharacterized conserved protein
  Mja:  MJ1025
  Fnu:  FN1147
  Eco:  yhaN+M
  EcZ:  Z4462
  Ecs:  ECs3990
  Sty:  STM3238
  Hin:  HI0855
_______

[K] COG3682 Predicted transcriptional regulator
  Pho:  PH1587
  Pab:  PAB1973
  Cac:  CAC3438
  Cgl:  Cgl0019
  Mtu:  Rv1846c
  MtC:  MT1894
  Mle:  ML2063
  Lla:  L45109
  Spy:  SPy1717
  Spn:  SP0727
  Sau:  SA0040 SAP012
  Syn:  slr0240
  Nos:  alr2569
  Ccr:  CC1510 CC1640 CC3507
_______

[R] COG3683 ABC-type uncharacterized transport system, periplasmic component
  Fnu:  FN1114
  Ype:  YPO2902
  Sty:  STM2552
  Hin:  HI1249
  Pmu:  PM0426
  Atu:  AGl739
  Sme:  SMc02985
  Bme:  BMEII1136
  Mlo:  mlr2979
  Tpa:  TP0557
_______

[G] COG3684 Tagatose-1,6-bisphosphate aldolase
  Spy:  SPy1704 SPy1919
  Spn:  SP1190
  Sau:  SA1994
  Lin:  lin0543
  Eco:  yihT
  EcZ:  ZyihT
  Ecs:  ECs4804
  Sty:  STM4022
  Mlo:  mlr3411
_______

[S] COG3685 Uncharacterized protein conserved in bacteria
  Nos:  all0615
  Eco:  yciE yciF
  EcZ:  Z1922 Z1923 ZyciE ZyciF
  Ecs:  ECs1653 ECs1654 ECs1829 ECs1830
  Sty:  STM1729 STM1730
  Pae:  PA2184
  Atu:  AGl1433 AGpA401 AGpA721 AGpA727
  Sme:  SMb20091 SMc00371
  Mlo:  mll4608 mll9661 mlr3134
_______

[S] COG3686 Predicted membrane protein
  Nos:  all4663
  Pae:  PA0540
  Nme:  NMB0979
  NmA:  NMA1176
  Rso:  RSc0788
  Atu:  AGc4774
  Bme:  BMEI0142
  Ccr:  CC1618
_______

[R] COG3687 Predicted metal-dependent hydrolase
  Mtu:  Rv2777c
  MtC:  MT2847
  Pae:  PA0830 PA1542 PA3325
  Rso:  RSp1030
  Ccr:  CC1344
_______

[R] COG3688 Predicted RNA-binding protein containing a PIN domain
  Cac:  CAC3153
  Spy:  SPy1937
  Sau:  SA0491
  Lin:  lin0274
  Bsu:  BS_yacP
  Bha:  BH0114
  Syn:  sll0297
  Nos:  all4545
_______

[S] COG3689 Predicted membrane protein
  Cac:  CAC1591
  Spy:  SPy0575
  Spn:  SP0904
  Lin:  lin0922
  Bsu:  BS_ycgQ
  Bha:  BH1517
  Syn:  slr1177
  Nos:  alr3362
_______

[S] COG3691 Uncharacterized protein conserved in bacteria
  Eco:  yfcZ yiiS
  EcZ:  Z3606 ZyiiS
  Ecs:  ECs3226 ECs4847
  Ype:  YPO2745
  Sty:  STM2390
  Vch:  VCA0919
  Hin:  HI0400 HI0636
  Pmu:  PM1070
_______

[S] COG3692 Uncharacterized protein conserved in bacteria
  Eco:  yifNm
  EcZ:  Z5287
  Ecs:  ECs4710
  Hin:  HI0080
  Nme:  NMB0897
  Ccr:  CC3153
_______

[G] COG3693 Beta-1,4-xylanase
  Tma:  TM0061_2 TM0070
  Cac:  CAP0053 CAP0116
  Bha:  BH2120
  Nos:  alr4448
  Atu:  AGc4304
  Ccr:  CC2803 CC3042
_______

[R] COG3694 ABC-type uncharacterized transport system, permease component
  Fnu:  FN0881
  Dra:  DR0204 DR1583
  Spy:  SPy0521
  Spn:  SP0638
  Syn:  slr0610
  Nos:  alr3052
_______

[L] COG3695 Predicted methylated DNA-protein cysteine methyltransferase
  Spo:  SPAC1250.04c
  Dra:  DR0428
  Cgl:  Cgl0149
  Mtu:  Rv3204
  MtC:  MT3299
  Lla:  L51690
  Lin:  lin0580
  Eco:  ybaZ
  EcZ:  ZybaZ
  Ecs:  ECs0508
  Ype:  YPO3139
  Sty:  STM0466
  Vch:  VC1065
  Pae:  PA4392
_______

[P] COG3696 Putative silver efflux pump
  Aae:  aq_1122 aq_469
  Syn:  slr0794
  Nos:  all7617 all7618 all7631 asr3133
  Eco:  ybdE
  EcZ:  ZybdE
  Ecs:  ECs0613
  Sty:  STM0562
  Pae:  PA2520
  Rso:  RSp0493 RSp0530 RSp0928 RSp1040
  Hpy:  HP0969 HP1329
  jHp:  jhp0903 jhp1249
  Sme:  SMb20882
  Ccr:  CC2390 CC2724
_______

[HI] COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase)
  Fnu:  FN0318
  Spy:  SPy1190
  Eco:  citX
  EcZ:  ZcitX
  Ecs:  ECs0653
  Sty:  STM0062 STM0620
  Vch:  VC0800
  Hin:  HI0021_1
_______

[S] COG3698 Predicted periplasmic protein
  Dra:  DR2601
  Eco:  yigEm
  EcZ:  Z5332
  Ecs:  ECs4745
  Atu:  AGc3235
  Sme:  SMc04328
  Bme:  BMEI0362
  Mlo:  mlr0120
_______

[R] COG3700 Acid phosphatase (class B)
  Spy:  SPy1113
  Eco:  aphA
  EcZ:  ZaphA
  Ecs:  ECs5037
  Sty:  STM4249
  Hin:  HI0495m
_______

[U] COG3701 Type IV secretory pathway, TrbF components
  Xfa:  XF2052 XFa0043
  Rso:  RSc2577
  Atu:  AGpT74
  Mlo:  mll9605 mlr6403
  Ccr:  CC2687
_______

[U] COG3702 Type IV secretory pathway, VirB3 components
  Xfa:  XFa0006
  Atu:  AGpA222 AGpT4GM AGpTbx137
  Sme:  SMa1318
  Bme:  BMEII0027
  Mlo:  mlr9250
  Ccr:  CC2418
  Rco:  RC0140
_______

[P] COG3703 Uncharacterized protein involved in cation transport
  Sce:  YER163c
  Spo:  SPBC31F10.03
  Bsu:  BS_ykqA_2
  Eco:  chaC
  EcZ:  ZchaC
  Ecs:  ECs1723
  Rso:  RSc0782
  Atu:  AGl2432
  Sme:  SMc00713
  Bme:  BMEI0077
  Mlo:  mll1647 mll2256 mll3532
  Ccr:  CC2220
_______

[U] COG3704 Type IV secretory pathway, VirB6 components
  Xfa:  XFa0011
  Atu:  AGpA226 AGpT10
  Sme:  SMa1311
  Bme:  BMEII0030
  Mlo:  mlr9255
  Ccr:  CC2420
  Rpr:  RP104 RP105 RP106 RP107 RP108_1
  Rco:  RC0142 RC0143 RC0144 RC0145 RC0146_1
_______

[E] COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis
  Aae:  aq_1155
  Dra:  DR1444
  Cac:  CAC0935
  Lla:  L0341
  Lin:  lin0578
  Bsu:  BS_hisZ
  Bha:  BH3584
  Syn:  slr1560
  Nos:  all2915
  Pae:  PA4939
  Nme:  NMB0814
  NmA:  NMA1023
  Rso:  RSc1225
  Atu:  AGc1214
  Sme:  SMc00918
  Bme:  BMEII1055
  Mlo:  mlr6929
  Ccr:  CC3512
_______

[T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain
  Tma:  TM0143
  Bha:  BH2233 BH2234
  Syn:  slr1760
  Nos:  all2874 alr2306_1 alr3599
  Pae:  PA3702 PA4396 PA4843
  Cje:  Cj0643
  Atu:  AGc1956 AGc2387
  Sme:  SMc01370
  Bme:  BMEII0660
  Mlo:  mll0859 mll9509
  Ccr:  CC1842 CC2462
  Rpr:  RP237
  Rco:  RC0321
  Bbu:  BB0419
_______

[T] COG3707 Response regulator with putative antiterminator output domain
  Fnu:  FN0076
  Cac:  CAC2721
  Mtu:  Rv1626
  MtC:  MT1662
  Mle:  ML1286
  Lin:  lin1136
  Pae:  PA1785 PA3363
  Rso:  RSc0382
  Atu:  AGl1879 AGpA790
  Sme:  SMb21115 SMc04297
  Mlo:  mlr2855
  Ccr:  CC0612
_______

[S] COG3708 Uncharacterized protein conserved in bacteria
  Fnu:  FN0315_2 FN0643
  Cac:  CAC0426_2 CAC3493
  Sau:  SA2223
  Lin:  lin0485 lin0911 lin2534
  Bsu:  BS_ydeE_2 BS_yobU
  Bha:  BH0594_2 BH0670 BH2119 BH3218 BH3506_2 BH3633 BH3634_2
  Pae:  PA4878_2
  Pmu:  PM0737
  Atu:  AGl698_2
  Sme:  SMc03170_2
  Mlo:  mll8212_2
_______

[P] COG3709 Uncharacterized component of phosphonate metabolism
  Eco:  phnN
  EcZ:  ZphnN
  Ecs:  ECs5077
  Ype:  YPO3464
  Pae:  PA3373
  Atu:  AGc277
  Sme:  SMb21170
  Bme:  BMEI0882
  Mlo:  mll4973 mll9141 mlr9288
_______

[K] COG3710 DNA-binding winged-HTH domains
  Mtu:  Rv0260c_2
  MtC:  MT0273_2
  Bha:  BH1777_2
  Eco:  cadC_1 ygeH_1 yqeI
  EcZ:  Z1531 ZcadC_1 ZygeH_1 ZyqeI
  Ecs:  ECs1274 ECs3704 ECs3709_1 ECs5115_1
  Ype:  YPO0736_1 YPO0804 YPO1301
  Sty:  STM0017 STM0029 STM0031 STM2557_1 STM2876_1 STM3759
  Vch:  VC0278_1 VC0984
  Sme:  SMb20702_1 SMc01198_1
  Mlo:  mll4655_1 mll6677 mlr2019_1 mlr6681_1 mlr6873_1
_______

[K] COG3711 Transcriptional antiterminator
  Fnu:  FN0198
  Cac:  CAC0155 CAC0422 CAC0569 CAC1355 CAC1406
  Cgl:  Cgl2781
  Lla:  L0154 L30901
  Spy:  SPy0181 SPy0571 SPy1325_1 SPy1952_1
  Spn:  SP0306 SP0395 SP0576 SP1187 SP2032 SP2131_1
  Sau:  SA0235_1 SA0321_1 SA1191 SA1961 SA2433_1
  Lin:  lin0325_1 lin0425_1 lin0445_1 lin0501_1 lin0871_1 lin0919_1 lin2203_1
        lin2243 lin2455_1 lin2530 lin2801_1 lin2817_1
  Bsu:  BS_glcT BS_licR_1 BS_licT BS_sacT BS_sacY BS_ydaA BS_yjdC_1
  Bha:  BH0193_1 BH0220_1 BH0297 BH0781 BH0845 BH3853
  Eco:  bglG csiE frvR_1
  EcZ:  ZcsiE ZfrvR_1
  Ecs:  ECs3401 ECs4823_1
  Ype:  YPO2903
  Sty:  STM2553 STM4448_1
_______

[PT] COG3712 Fe2+-dicitrate sensor, membrane component
  Eco:  fecR
  Pae:  PA0150 PA0471 PA0676 PA1301 PA1364 PA1911 PA2051
        PA2094 PA2388 PA2467 PA3409 PA3900 PA4895
  Rso:  RSc2919 RSp0850
  Atu:  AGl2289 AGl2871 AGpAbx251
  Sme:  SMc04204
  Ccr:  CC0560 CC0982 CC1130 CC2708
_______

[M] COG3713 Outer membrane protein V
  Fnu:  FN0394
  Eco:  yeaF yiaT
  EcZ:  ZyeaF ZyiaT
  Ecs:  ECs2491 ECs4460
  Ype:  YPO2155
  Sty:  STM1286
  Vch:  VC1318
  Pmu:  PM0998
  Rso:  RSc2133 RSc2284 RSc3065
  Atu:  AGc1156 AGc1796
  Sme:  SMc00989
  Mlo:  mlr1332 mlr8248
  Ccr:  CC0351
_______

[S] COG3714 Predicted membrane protein
  Mtu:  Rv1401
  MtC:  MT1445
  Eco:  yhhN
  EcZ:  ZyhhN
  Ecs:  ECs4317
  Ype:  YPO3819
  Sty:  STM3575
  Vch:  VC0144 VCA0703
  Rso:  RSc3353
  Bme:  BMEII0243
  Mlo:  mll3549
  Ccr:  CC0392
_______

[G] COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
  Fnu:  FN0630
  Cac:  CAC1459 CAP0067
  Lla:  L146623
  Spy:  SPy0630 SPy1059 SPy1739
  Spn:  SP0062 SP0283 SP0324 SP2162
  Lin:  lin0022 lin0144 lin0775 lin2109
  Bsu:  BS_levF
  Eco:  agaC agaW manY
  EcZ:  Z4486 Z5615 ZagaC ZmanY
  Ecs:  ECs2528 ECs4012 ECs5000
  Ype:  YPO0835 YPO1757
  Sty:  STM0575 STM1831 STM3770 STM4537
  Pmu:  PM0833
_______

[G] COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
  Fnu:  FN0629
  Cac:  CAC1460 CAP0068
  Lla:  L147466
  Spy:  SPy0629 SPy1060 SPy1740
  Spn:  SP0063 SP0282 SP0325 SP2161
  Lin:  lin0023 lin0145 lin0774 lin2108
  Bsu:  BS_levG
  Eco:  agaD manZ
  EcZ:  Z4487 Z5614 ZagaD ZmanZ
  Ecs:  ECs2529 ECs4013 ECs4019 ECs4942 ECs4999
  Ype:  YPO0836 YPO1756
  Sty:  STM0574 STM1832 STM3769 STM4538
  Pmu:  PM0832
_______

[G] COG3717 5-keto 4-deoxyuronate isomerase
  Bsu:  BS_kduI
  Bha:  BH2166
  Eco:  kduI
  EcZ:  ZkduI
  Ecs:  ECs3700
  Ype:  YPO1725
  Sty:  STM3018
  Atu:  AGl3335
  Sme:  SMa0214 SMb21349
  Ccr:  CC1491
_______

[G] COG3718 Uncharacterized enzyme involved in inositol metabolism
  Cgl:  Cgl0161
  Lin:  lin0402
  Bsu:  BS_iolB
  Bha:  BH2320
  Ype:  YPO2587
  Sty:  STM4420
  Rso:  RSc1237
  Atu:  AGl719
  Sme:  SMc00432
  Bme:  BMEII0569
  Mlo:  mll4976
  Ccr:  CC1301
_______

[J] COG3719 Ribonuclease I
  Eco:  rna
  EcZ:  Zrna
  Ecs:  ECs0650
  Sty:  STM0617
  Hin:  HI0526
  Pmu:  PM1859
  Atu:  AGc2097
  Sme:  SMc00606 SMc02819
  Bme:  BMEI1247
  Mlo:  mll1611
  Ccr:  CC0030
_______

[P] COG3720 Putative heme degradation protein
  EcZ:  ZchuS
  Ecs:  ECs4379
  Ype:  YPO0282
  Pae:  PA4709
  Rso:  RSp0243
  Sme:  SMc01513
  Mlo:  mll1152
_______

[P] COG3721 Putative heme iron utilization protein
  EcZ:  ZchuX
  Ecs:  ECs4384
  Ype:  YPO0285
  Vch:  VCA0908
  Pmu:  PM0298
  Atu:  AGc4470
_______

[K] COG3722 Transcriptional regulator
  Eco:  mtlR yggD
  EcZ:  ZmtlR ZyggD
  Ecs:  ECs3805 ECs4477
  Ype:  YPO4066
  Sty:  STM3687
  Vch:  VCA1047
  Pmu:  PM1063
_______

[L] COG3723 Recombinational DNA repair protein (RecE pathway)
  Lla:  L53019
  Spy:  SPy1477
  Sau:  SA1794
  Lin:  lin0085 lin2413
  Bsu:  BS_yqaK
  Bha:  BH3543
  Eco:  recT
  EcZ:  ZrecT
  Ecs:  ECs1933
_______

[E] COG3724 Succinylarginine dihydrolase
  Eco:  astB
  EcZ:  Z2777
  Ecs:  ECs2451
  Ype:  YPO1965
  Sty:  STM1306
  Pae:  PA0899
  Ccr:  CC0583 CC1608
_______

[V] COG3725 Membrane protein required for beta-lactamase induction
  Eco:  ampE
  EcZ:  ZampE
  Ecs:  ECs0115
  Ype:  YPO3422
  Sty:  STM0147
  Pae:  PA4521
  Xfa:  XF1979
_______

[R] COG3726 Uncharacterized membrane protein affecting hemolysin expression
  Eco:  smp
  EcZ:  Z5988_1
  Ecs:  ECs5345_1
  Ype:  YPO0441
  Sty:  STM4577
  Vch:  VC2346
  Pae:  PA4961_1
  Pmu:  PM1658
_______

[L] COG3727 DNA G:T-mismatch repair endonuclease
  Eco:  vsr
  EcZ:  Zvsr
  Ecs:  ECs2698
  Sty:  STM1991
  NmA:  NMA0429
  Rso:  RSc3439
  Sme:  SMc03764
  Ccr:  CC3624
_______

[L] COG3728 Phage terminase, small subunit
  Lla:  L36274
  Spy:  SPy0971
  Sau:  SA1820
  Lin:  lin0104
  Bsu:  BS_xtmA
  EcZ:  Z1357 Z1802 Z3333 Z6046
  Ecs:  ECs1541 ECs1791 ECs1970 ECs2252
  Ype:  YPO0641a
  Pae:  PA2868_2
  Mlo:  mlr5477
_______

[R] COG3729 General stress protein
  Bsu:  BS_gsiB
  Nos:  alr1718
  Eco:  yciG
  EcZ:  Z1924 ZyciG
  Ecs:  ECs1655 ECs1831
  Sty:  STM1121 STM1513 STM1728
  Pae:  PA2146 PA2190
  Ccr:  CC1178
_______

[G] COG3730 Phosphotransferase system sorbitol-specific component IIC
  Lin:  lin0548
  Bha:  BH0771
  Eco:  srlA
  EcZ:  ZsrlA.1 ZsrlA.2
  Ecs:  ECs3559
  Sty:  STM2750 STM2832
  Pmu:  PM1971
  Mlo:  mll3614
_______

[G] COG3731 Phosphotransferase system sorbitol-specific component IIA
  Lin:  lin0546
  Bha:  BH0773
  Eco:  srlB
  EcZ:  ZsrlB
  Ecs:  ECs3560
  Sty:  STM2751 STM2834
  Pmu:  PM1969
  Mlo:  mll3610
_______

[G] COG3732 Phosphotransferase system sorbitol-specific component IIBC
  Lin:  lin0547
  Bha:  BH0772
  Eco:  srlE
  EcZ:  ZsrlE.1 ZsrlE.2
  Sty:  STM2752 STM2833
  Pmu:  PM1970
  Mlo:  mll3613
_______

[Q] COG3733 Cu2+-containing amine oxidase
  Sso:  SSO1692
  Spo:  SPAC2E1P3.04
  Dra:  DRB0101
  Nos:  alr3431
  Eco:  tynA
  Mlo:  mll6250
_______

[G] COG3734 2-keto-3-deoxy-galactonokinase
  Eco:  dgoK
  Sty:  STM3829
  Atu:  AGc1271 AGpA669
  Sme:  SMa0705 SMc00881
  Bme:  BMEII0357
  Mlo:  mlr4742
  Ccr:  CC0785
  Rso:  RSc2759
_______

[S] COG3735 Uncharacterized protein conserved in bacteria
  Cac:  CAC1768
  Eco:  ybaP
  EcZ:  ZybaP
  Ecs:  ECs0535
  Ype:  YPO3087
  Sty:  STM0496
  Vch:  VC2220
  Atu:  AGc4767
  Sme:  SMc02488
  Bme:  BMEI0146
  Mlo:  mlr4292
  Ccr:  CC2229
  Tpa:  TP0675
_______

[U] COG3736 Type IV secretory pathway, component VirB8
  Xfa:  XFa0012
  Hpy:  HP0038 HP0439 HP0530
  jHp:  jhp0034 jhp0479 jhp0921
  Atu:  AGpA228 AGpT11
  Sme:  SMa1308
  Bme:  BMEII0032
  Mlo:  mlr9256
  Rpr:  RP287 RP289
  Rco:  RC0385 RC0387
_______

[S] COG3737 Uncharacterized conserved protein
  Xfa:  XF0096
  Nme:  NMB1227
  NmA:  NMA1394
  Rso:  RSc1325
  Atu:  AGc2875
  Sme:  SMc02056
  Bme:  BMEI1075
  Mlo:  mll1069
  Ccr:  CC1989
_______

[S] COG3738 Uncharacterized protein conserved in bacteria
  Eco:  yijF
  EcZ:  ZyijF
  Ecs:  ECs4873
  Sty:  STM4107
  Pae:  PA1573
  Pmu:  PM0035
  Ccr:  CC1379
_______

[S] COG3739 Uncharacterized integral membrane protein
  Lla:  L165247
  Lin:  lin1029
  Bsu:  BS_yoaT
  Bha:  BH3088
  Pmu:  PM1172
  Atu:  AGc3514
  Ccr:  CC0458
_______

[R] COG3740 Phage head maturation protease
  Mtu:  Rv1577c Rv2651c
  MtC:  MT2728 MT3573.8
  Lla:  L112195 L55698 L67524
  Lin:  lin2577
  EcZ:  Z1848
  Ecs:  ECs1591
  Sty:  STM2236
  Rso:  RSc1683
  Atu:  AGc1747
  Ccr:  CC2786
_______

[E] COG3741 N-formylglutamate amidohydrolase
  Dra:  DR1397
  Ype:  YPO1971
  Pae:  PA5091
  Atu:  AGl1827 AGl1927
  Sme:  SMb21164 SMc04043
  Bme:  BMEII0049 BMEII0366
  Mlo:  mll3040 mlr8322
  Ccr:  CC0743 CC0958
_______

[S] COG3742 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0609 Rv0624 Rv1741 Rv1982c Rv2759c
  MtC:  MT0638 MT0652 MT1783 MT2034 MT2829
  Sme:  SMc00900 SMc02715 SMc02987
  Mlo:  mll9357
  Ccr:  CC0639
_______

[S] COG3743 Uncharacterized conserved protein
  Hbs:  VNG0383H
  Atu:  AGc2348_2
  Sme:  SMc01919
  Bme:  BMEI0260_2 BMEI1303
  Mlo:  mll1364 mll1366_2 mll4019_2 mlr3004
  Ccr:  CC1098
_______

[S] COG3744 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2829c
  MtC:  MT2291
  Syn:  sll0205 sll0525 sll1092 ssr0756
  Nos:  all0753 all2685 all3972 all4135 alr0149 alr3469
  Nme:  NMB1665
  Atu:  AGc3881
  Sme:  SMa2253
_______

[U] COG3745 Flp pilus assembly protein CpaB
  Pae:  PA4305
  Rso:  RSc0656 RSp1089
  Atu:  AGc380
  Sme:  SMa1576 SMc04112
  Mlo:  mll0900 mll6480 mlr5595
  Ccr:  CC2946
_______

[P] COG3746 Phosphate-selective porin
  Pae:  PA3279 PA3280
  Xfa:  XF0321 XF0975
  Ccr:  CC0911
_______

[L] COG3747 Phage terminase, small subunit
  Cac:  CAC1896
  Mtu:  Rv1578c Rv2652c
  MtC:  MT2729 MT3573.7
  Lla:  L38962 L64021
  EcZ:  Z1853
  Ecs:  ECs1597
_______

[S] COG3748 Predicted membrane protein
  Pae:  PA1513
  Rso:  RSc2115
  Atu:  AGc4211
  Sme:  SMb20848 SMb21292
  Bme:  BMEI1572
  Mlo:  mlr5140
  Ccr:  CC1988 CC2607
_______

[S] COG3749 Uncharacterized protein conserved in bacteria
  Pae:  PA1837 PA4129
  Rso:  RSc1863 RSc2424
  Atu:  AGc2689
  Sme:  SMc02123
  Bme:  BMEI1764
  Mlo:  mll3227
  Ccr:  CC1120
_______

[S] COG3750 Uncharacterized protein conserved in bacteria
  Atu:  AGl2151
  Sme:  SMc04009
  Bme:  BMEI0289
  Mlo:  mll3968 mlr7984_1
  Ccr:  CC3319
  Rpr:  RP113
  Rco:  RC0153
_______

[O] COG3751 Predicted proline hydroxylase
  Sce:  YER049w
  Spo:  SPBC6B1.08c
  Ecu:  ECU07g0690
  Syn:  sll0191 sll0428
  Nos:  alr5242
  Vch:  VCA0949
  Pae:  PA0310
  Ccr:  CC2488 CC2821
_______

[S] COG3752 Predicted membrane protein
  Spo:  SPCC594.04c
  Mtu:  Rv0446c
  MtC:  MT0462
  Lla:  L176238
  Lin:  lin0600
  Atu:  AGc3597
  Mlo:  mlr8090
  Ccr:  CC3110
_______

[S] COG3753 Uncharacterized protein conserved in bacteria
  Eco:  yidB
  EcZ:  ZyidB
  Ecs:  ECs4633
  Pae:  PA3796
  Rso:  RSc2764
  Sme:  SMa1765
  Bme:  BMEI1500
  Mlo:  mll0256 mlr4715 mlr5732 mlr5750
_______

[M] COG3754 Lipopolysaccharide biosynthesis protein
  Lla:  L7894
  Spy:  SPy0792
  Atu:  AGl543_1
  Mlo:  mll4799 mlr7559 mlr7560 mlr7561
  Ccr:  CC0633
_______

[S] COG3755 Uncharacterized protein conserved in bacteria
  Dra:  DR2210
  Nos:  alr1877
  Eco:  yecT
  EcZ:  ZyecT
  Ecs:  ECs2587
  Sty:  STM1123
  Pae:  PA3021
  Atu:  AGc4360
  Sme:  SMc02046
  Mlo:  mll3812 mll4801
  Ccr:  CC2986 CC2991 CC2994
_______

[S] COG3756 Uncharacterized protein conserved in bacteria
  Eco:  ydaU_1
  Xfa:  XF1560 XF1664 XF1665
  Mlo:  mll2129 mlr7995
_______

[M] COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
  Cac:  CAC0554_1 CAC1108_1 CAC1876_1 CAC2621_1
  Lla:  L154225
  Spy:  SPy0601 SPy1006
  Spn:  SP0987
  Eco:  yegX
  EcZ:  ZyegX
  Ecs:  ECs2905
  Xfa:  XF2392
  Atu:  AGc3846 AGc393
  Sme:  SMb21091 SMc00980 SMc01846
  Bme:  BMEI0562 BMEII0782
  Mlo:  mll7449 mlr0125 mlr1579 mlr7748
_______

[S] COG3758 Uncharacterized protein conserved in bacteria
  Fnu:  FN1763
  Spy:  SPy2087
  Eco:  ydjR
  EcZ:  Z2774
  Ecs:  ECs2448
  Ype:  YPO1975
  Pae:  PA5104
  Rso:  RSc2522
  Atu:  AGl1834
  Sme:  SMc00667
  Bme:  BMEII0364
  Mlo:  mlr8324
_______

[S] COG3759 Predicted membrane protein
  Cgl:  Cgl3016
  Lla:  L101688
  Spn:  SP2061
  Sau:  SA0380
  Lin:  lin0518
  Hin:  HI0555
  Nme:  NMB0528
  NmA:  NMA0706
  Rso:  RSp1309 RSp1340
  Atu:  AGl3168
  Mlo:  mll3930
_______

[S] COG3760 Uncharacterized conserved protein
  Lla:  L89201
  Pae:  PA1841
  Atu:  AGl2275
  Sme:  SMc03800
  Bme:  BMEII0400
  Mlo:  mll4433
  Ccr:  CC0111
_______

[C] COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit
  Atu:  AGc2444
  Sme:  SMc01348
  Bme:  BMEI1066
  Mlo:  mlr0198
  Ccr:  CC1887
  Rpr:  RP725
  Rco:  RC1107
_______

[S] COG3762 Predicted membrane protein
  Pmu:  PM0784
  Rso:  RSc0662
  Bme:  BMEI0230
  Mlo:  mll4125
  Ccr:  CC3457
  Tpa:  TP0570
_______

[S] COG3763 Uncharacterized protein conserved in bacteria
  Lla:  L113060
  Spy:  SPy0359
  Spn:  SP1882
  Sau:  SA1178
  Lin:  lin1344
  Bsu:  BS_yneF
  Bha:  BH2350
  Uur:  UU265
  Mpu:  MYPU_1460
  Mpn:  MPN482
  Mge:  MG335.1
_______

[M] COG3764 Sortase (surface protein transpeptidase)
  Mth:  MTH1030 MTH1829
  Mka:  MK0158
  Cac:  CAC0204
  Cgl:  Cgl2874
  Lla:  L125196 L169709
  Spy:  SPy0135 SPy1154
  Spn:  SP0466 SP0467 SP0468 SP1218
  Sau:  SA2316
  Lin:  lin0929
  Bsu:  BS_yhcS BS_ywpE
  Bha:  BH0362 BH2015 BH2127 BH3596 BH4010
_______

[M] COG3765 Chain length determinant protein
  Eco:  fepE wzzB wzzE
  EcZ:  ZfepE ZwzzB ZwzzE
  Ecs:  ECs0626 ECs2828 ECs4718
  Ype:  YPO3096 YPO3865
  Sty:  STM0589 STM2079 STM3919
  Pae:  PA0938 PA3160
  Hin:  HI0109 HI0866
  Pmu:  PM0464
_______

[S] COG3766 Predicted membrane protein
  Bsu:  BS_yshE
  Bha:  BH3105
  Eco:  yjfL
  EcZ:  ZyjfL
  Ecs:  ECs5160
  Sty:  STM4374
  Rso:  RSp1297
  Atu:  AGc3816
  Ccr:  CC0135 CC2365
_______

[S] COG3767 Uncharacterized low-complexity protein
  Pae:  PA3284 PA4107_1
  Hin:  HI1601
  Pmu:  PM0212
  Nme:  NMB2141
  NmA:  NMA0227
_______

[S] COG3768 Predicted membrane protein
  Eco:  ycjF
  EcZ:  ZycjF
  Ecs:  ECs1901
  Ype:  YPO2347
  Sty:  STM1684
  Hin:  HI0043
  Pmu:  PM0909
  Atu:  AGc2505
  Sme:  SMc00466
  Bme:  BMEI0952
  Mlo:  mlr0776
_______

[R] COG3769 Predicted hydrolase (HAD superfamily)
  Pho:  PH0926
  Pab:  PAB0817
  Ape:  APE0887
  Eco:  yedP
  EcZ:  Z3045
  Ecs:  ECs2693
  Sty:  STM1986
_______

[M] COG3770 Murein endopeptidase
  Eco:  mepA
  EcZ:  ZmepA
  Ecs:  ECs3212
  Ype:  YPO2752
  Sty:  STM2383
  Hin:  HI0197
  Pmu:  PM0360
  Atu:  AGc314
  Sme:  SMc02833
  Bme:  BMEII0253
  Mlo:  mlr4639
_______

[S] COG3771 Predicted membrane protein
  Eco:  yciS
  EcZ:  ZyciS
  Ecs:  ECs1852
  Ype:  YPO2224
  Sty:  STM1709
  Vch:  VC1913
  Hin:  HI1222
  Pmu:  PM0799
_______

[R] COG3772 Phage-related lysozyme (muraminidase)
  Cac:  CAP0151_2
  Nos:  alr1167_2
  Eco:  ybcS ydfQ
  EcZ:  Z0960 Z1352 Z1469 Z1796 Z2071 Z2120 Z2371
        Z3104 Z3339 Z6051
  Ecs:  ECs0819 ECs1096 ECs1213 ECs1532 ECs1784 ECs1964 ECs2186
        ECs2259 ECs2741 ECs2968 ECs3495 ECs4962
  Ype:  YPO2098
  Sty:  STM1028 STM2612 STM2715 STM3605
  Xfa:  XF0513 XF0540_1 XF0707 XF1564 XF1669 XF2314 XF2504
  Rso:  RSc0883 RSc3192
  Mlo:  mll0441_1
  Ccr:  CC2173
  Rco:  RC1298
_______

[M] COG3773 Cell wall hydrolyses involved in spore germination
  Cac:  CAC0686_2 CAC1232_2 CAC3081
  Bsu:  BS_cwlJ BS_sleB_2 BS_ykvT
  Bha:  BH1631_2 BH2879_2 BH3826
  Atu:  AGc1291
  Sme:  SMc00928
  Bme:  BMEI1548 BMEI1983
  Mlo:  mlr5508 mlr7408
  Ccr:  CC2872 CC2967
_______

[M] COG3774 Mannosyltransferase OCH1 and related enzymes
  Sce:  YBR161w YGL038c YJR075w YPL057c
  Spo:  SPAC1006.05c SPAC17G8.11c SPCC4F11.04c
  Fnu:  FN1241
  Vch:  VC0234
  Pmu:  PM1116
  Rso:  RSp0388
  Atu:  AGc1538 AGc4682
_______

[G] COG3775 Phosphotransferase system, galactitol-specific IIC component
  Cac:  CAC2956
  Spy:  SPy1709
  Spn:  SP0647
  Sau:  SA0238
  Lin:  lin0508 lin2200 lin2814
  Bha:  BH0190
  Eco:  gatC sgcC
  EcZ:  Z4877 ZgatC
  Ecs:  ECs2895 ECs4352
  Sty:  STM1614 STM3260 STM3782
_______

[S] COG3776 Predicted membrane protein
  Eco:  yhhL
  EcZ:  ZyhhL
  Ecs:  ECs4315
  Ype:  YPO3816a
  Sty:  STM3573
  Vch:  VC0145
  Pae:  PA0738 PA1042
_______

[S] COG3777 Uncharacterized conserved protein
  Sce:  YHR067w
  Spo:  SPBC1105.15c
  Pae:  PA0878
  Bme:  BMEII1075
  Ccr:  CC1109
_______

[S] COG3778 Uncharacterized protein conserved in bacteria
  Eco:  ymfQ
  Ecs:  ECs4988
  Ype:  YPO1251
  Hin:  HI1521
  Nme:  NMB1114
  NmA:  NMA1324 NMA1825
_______

[S] COG3779 Uncharacterized protein conserved in bacteria
  Eco:  yegJ
  Nme:  NMB1133_1 NMB1171_1
  NmA:  NMA1343_1
  Mlo:  mlr2620
_______

[L] COG3780 DNA endonuclease related to intein-encoded endonucleases
  Mja:  MJ0314 MJ0398
  Mka:  MK0555
  Pho:  PH0309
  Pab:  PAB1251
  Ape:  APE1929
_______

[S] COG3781 Predicted membrane protein
  Syn:  sll1024
  Nos:  alr2987
  Eco:  yneE
  EcZ:  Z2185
  Ecs:  ECs2127
  Sty:  STM1527
  Rso:  RSc3414
  Mlo:  mll4386
_______

[S] COG3782 Uncharacterized protein conserved in bacteria
  Vch:  VC2094
  Pae:  PA3089
  Nme:  NMB1349
  NmA:  NMA1561
_______

[C] COG3783 Soluble cytochrome b562
  Eco:  cybC
  EcZ:  ZcybC
  Ecs:  ECs5213
  Ype:  YPO3320 YPO3694
  Sty:  STM4439
  Vch:  VCA0893
  Pmu:  PM0670
_______

[S] COG3784 Uncharacterized protein conserved in bacteria
  Eco:  ydbL
  EcZ:  ZydbL
  Ecs:  ECs2005
  Ype:  YPO2326
  Sty:  STM1644
  Pae:  PA5305
  Ccr:  CC3552
_______

[S] COG3785 Uncharacterized conserved protein
  Eco:  yccV
  EcZ:  ZyccV
  Ecs:  ECs1050
  Ype:  YPO1444
  Sty:  STM1079
  Atu:  AGc3257
  Sme:  SMc00949
  Bme:  BMEII0693
  Mlo:  mlr0512
  Ccr:  CC1613
_______

[S] COG3786 Uncharacterized protein conserved in bacteria
  Cac:  CAC3676
  Mtu:  Rv0309
  MtC:  MT0322
  Mle:  ML2522
  Lin:  lin2861
  Atu:  AGc5012
  Sme:  SMc03821
  Bme:  BMEI0065
  Mlo:  mll4235
  Ccr:  CC3744
_______

[S] COG3787 Uncharacterized protein conserved in bacteria
  Eco:  yhbP
  EcZ:  ZyhbP
  Ecs:  ECs4035
  Ype:  YPO3467
  Sty:  STM3270
  Pmu:  PM1958
  Cje:  Cj1449c
_______

[R] COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily
  Nos:  all3458
  Eco:  yecN
  EcZ:  ZyecN
  Ecs:  ECs2579
  Ype:  YPO2051
  Sty:  STM1904
  Vch:  VCA0022
  Ccr:  CC0310
_______

[S] COG3789 Uncharacterized protein conserved in bacteria
  Eco:  yjfI
  EcZ:  ZyjfI
  Ecs:  ECs5157
  Sty:  STM4370
  Pae:  PA3732
  Ccr:  CC2363
_______

[S] COG3790 Predicted membrane protein
  Eco:  ybgE
  EcZ:  ZybgE
  Ecs:  ECs0770
  Ype:  YPO1119
  Sty:  STM0743
  Vch:  VC1841
  Pmu:  PM0972
_______

[S] COG3791 Uncharacterized conserved protein
  Spo:  SPAC29B12.13
  Sty:  STM1573 STM1643
  Pae:  PA2706 PA2722 PA4177 PA5465
  Rso:  RSc3305
  Atu:  AGc1976 AGc1978 AGc2344 AGc4363
  Sme:  SMa0112 SMb20186 SMb20606 SMb21378 SMc00156 SMc00431 SMc01197
        SMc02548 SMc02549 SMc02550 SMc04046 SMc04177 SMc04188
  Bme:  BMEI0031
  Mlo:  mll0025 mll0824 mll1601 mll4859 mll5054 mll7476 mlr0112
        mlr0219 mlr0874 mlr1783 mlr3608 mlr7801 mlr7802 msr3371
  Ccr:  CC1514 CC3092 CC3683
_______

[S] COG3792 Uncharacterized protein conserved in bacteria
  Pmu:  PM1634 PM1635 PM1636 PM1637
  Xfa:  XF2190 XF2191 XF2193 XF2195 XF2198 XF2200 XF2768
        XF2770 XF2772 XF2774
  Nme:  NMB0200 NMB0513 NMB1777
_______

[P] COG3793 Tellurite resistance protein
  Dra:  DR2220
  Syn:  slr1194_1
  Nos:  alr3738_1
  EcZ:  Z1346 Z1347 Z2105 Z2106 Z2379 Z3109 Z6056
        ZterB ZterB.2
  Ecs:  ECs1353 ECs1959 ECs2190 ECs2265 ECs2749
  Ype:  YPO0296
  Atu:  AGc779
  Ccr:  CC0718 CC3681
_______

[C] COG3794 Plastocyanin
  Hbs:  VNG0249G VNG0573C VNG0586C VNG0786G VNG0795G VNG1188G VNG1637G
        VNG2196G
  Mac:  MA1357 MA1358 MA1685
  Syn:  sll0199
  Nos:  all0258
  Atu:  AGc4149 AGl2859
  Sme:  SMa1243 SMb20594 SMc04047
  Bme:  BMEII0965
  Mlo:  mll8137 mlr4661
_______

[S] COG3795 Uncharacterized protein conserved in bacteria
  Pae:  PA1349 PA1354
  Rso:  RSp0637
  Atu:  AGc1556
  Sme:  SMc00939 SMc01151
  Mlo:  mll2871 mll4253 mll7838 mlr2587 mlr2988 mlr4612
  Ccr:  CC0390 CC1329_1
_______

[S] COG3797 Uncharacterized protein conserved in bacteria
  Mtu:  Rv1154c
  MtC:  MT1188
  Spn:  SP0830
  Lin:  lin1893
  Atu:  AGc3207
  Sme:  SMc00454 SMc01009
  Mlo:  mll0605 mlr0163
  Ccr:  CC2108
_______

[S] COG3798 Uncharacterized protein conserved in bacteria
  Dra:  DR1261 DR1348
  Mlo:  msr0083
  Ccr:  CC1532
_______

[E] COG3799 Methylaspartate ammonia-lyase
  Hbs:  VNG2289G
  EcZ:  Z0892
  Ecs:  ECs0761
  Mlo:  mlr6095 msl6020
_______

[R] COG3800 Predicted transcriptional regulator
  Cgl:  Cgl0365_2 Cgl0678_2
  Mtu:  Rv0465c_2 Rv1129c_2
  MtC:  MT0481_2 MT1161_2
  Atu:  AGc1081_2 AGl2480_2
  Sme:  SMb20754_2 SMc00769_2
  Bme:  BMEI0410_2 BMEI0802_2
  Mlo:  mlr6529_2
  Ccr:  CC1763_2
_______

[S] COG3801 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2570
  MtC:  MT2646
  Mlo:  mlr3218
  Ccr:  CC3314 CC3426
_______

[S] COG3802 Uncharacterized protein conserved in bacteria
  Pae:  PA2216
  Atu:  AGc4261
  Sme:  SMb20892
  Bme:  BMEII0354
  Mlo:  mll5655 mll7189
  Ccr:  CC1419
_______

[S] COG3803 Uncharacterized protein conserved in bacteria
  Pae:  PA2878 PA5109
  Rso:  RSc2089
  Atu:  AGc189
  Sme:  SMa1626 SMc00282 SMc04178
  Bme:  BMEI0803
  Mlo:  mlr0784
  Ccr:  CC2122
_______

[S] COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase
  Afu:  AF0634
  Mtu:  Rv0926c Rv1059
  MtC:  MT0953 MT1089
  Mlo:  mll2179
_______

[Q] COG3805 Aromatic ring-cleaving dioxygenase
  Nos:  alr0056
  Vch:  VC0788
  Mlo:  mll2280
_______

[T] COG3806 Anti-sigma factor
  Vch:  VC2301
  Rso:  RSp0432
  Mlo:  mlr7069 mlr8089
  Ccr:  CC0647
_______

[S] COG3807 Uncharacterized protein conserved in bacteria
  Atu:  AGc117
  Sme:  SMc02848
  Bme:  BMEI1953
  Mlo:  mll5573
  Ccr:  CC3721
  Rpr:  RP809
  Rco:  RC1251
_______

[C] COG3808 Inorganic pyrophosphatase
  Mac:  MA3879 MA3880
  Pya:  PAE1771
  Tma:  TM0174
  Fnu:  FN2030
  Atu:  AGc2169
  Sme:  SMc01780
  Bme:  BMEI1185
  Mlo:  mlr8418
  Ccr:  CC1363
_______

[S] COG3809 Uncharacterized protein conserved in bacteria
  Pya:  PAE0597
  Cje:  Cj1164c
  Mlo:  msl7161
  Ccr:  CC2510
_______

[S] COG3811 Uncharacterized protein conserved in bacteria
  Sty:  STM4501
  Pae:  PA0712
  Sme:  SMc01351
  Mlo:  mll0189
  Ccr:  CC0226
_______

[S] COG3812 Uncharacterized protein conserved in bacteria
  Pae:  PA0055
  Rso:  RSp1548
  Mlo:  mlr0096
  Ccr:  CC3654
_______

[S] COG3813 Uncharacterized protein conserved in bacteria
  Pae:  PA1849
  Rso:  RSp1158
  Atu:  AGc4366
  Sme:  SMc01940
  Mlo:  msl4947
  Ccr:  CC2833
_______

[S] COG3814 Uncharacterized protein conserved in bacteria
  Atu:  AGc3712
  Sme:  SMc01450
  Bme:  BMEI0603
  Mlo:  mlr1474
  Ccr:  CC2102
  Rpr:  RP727
  Rco:  RC1109
_______

[S] COG3815 Predicted membrane protein
  Hbs:  VNG0988H
  Mth:  MTH518
  Mja:  MJ1492
_______

[S] COG3816 Uncharacterized protein conserved in bacteria
  Pae:  PA2954
  Atu:  AGc4096
  Sme:  SMc02702
  Bme:  BMEI0461
  Mlo:  mll2728
  Ccr:  CC0406
_______

[S] COG3817 Predicted membrane protein
  Spy:  SPy0507
  Spn:  SP0859
  Ype:  YPO2702
  Rso:  RSc2167
  Cje:  Cj0553
  Ccr:  CC1199
_______

[R] COG3818 Predicted acetyltransferase, GNAT superfamily
  Xfa:  XF1323
  Mlo:  mlr1123
  Ccr:  CC3412
_______

[S] COG3819 Predicted membrane protein
  Spy:  SPy0508
  Spn:  SP0858
  Ype:  YPO2701
  Rso:  RSc2168
  Cje:  Cj0552
  Ccr:  CC1200
_______

[S] COG3820 Uncharacterized protein conserved in bacteria
  Atu:  AGc4981
  Sme:  SMc04094
  Bme:  BMEI0303
  Mlo:  mll3765
  Ccr:  CC3292
  Rpr:  RP073
  Rco:  RC0103
_______

[S] COG3821 Predicted membrane protein
  Pae:  PA1591
  Atu:  AGc2843
  Sme:  SMc01257
  Mlo:  mlr0671
  Ccr:  CC1018
_______

[R] COG3822 ABC-type sugar transport system, auxiliary component
  Bsu:  BS_ydaE
  EcZ:  Z5688
  Ecs:  ECs5070
  Ype:  YPO3961
  Pmu:  PM1374
  Bme:  BMEI0550
  Mlo:  mlr8329
_______

[O] COG3823 Glutamine cyclotransferase
  Dra:  DR0112
  Cgl:  Cgl0799
  Spy:  SPy0505
  Ype:  YPO3874
  Ccr:  CC2650
_______

[S] COG3824 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2834
  Mtu:  Rv3836
  MtC:  MT3944
  Sme:  SMc03791
  Bme:  BMEII0410
  Mlo:  mll4425
  Ccr:  CC3483
_______

[S] COG3825 Uncharacterized protein conserved in bacteria
  Nos:  alr3492
  Pae:  PA2705
  Rso:  RSc0996
  Mlo:  mlr3961
  Ccr:  CC2074
_______

[S] COG3826 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2227
  MtC:  MT2286
  Rso:  RSc2567
  Mlo:  mlr1862
  Ccr:  CC0708
_______

[S] COG3827 Uncharacterized protein conserved in bacteria
  Atu:  AGc3158
  Sme:  SMc02081
  Bme:  BMEI1028
  Mlo:  mll1106
  Ccr:  CC1319
  Rpr:  RP225
  Rco:  RC0307
_______

[S] COG3828 Uncharacterized protein conserved in bacteria
  Bha:  BH0709
  Atu:  AGl3146
  Sme:  SMc02468
  Mlo:  mll2313
  Ccr:  CC2023
_______

[KT] COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
  Aae:  aq_091m
  Cac:  CAC0459 CAC3088_2
  Lin:  lin2276
  Bsu:  BS_rocR BS_yqiR
  Bha:  BH0992 BH1879 BH2739 BH2766 BH3899 BH3944
  Eco:  ygeV
  EcZ:  ZygeV
  Ecs:  ECs3742
  Sty:  STM0652 STM2361
  Pae:  PA1196 PA2005
  Rso:  RSp0123
_______

[T] COG3830 ACT domain-containing protein
  Afu:  AF2138_1
  Mac:  MA3235
  Mja:  MJ1558
  Mka:  MK1213
  Pya:  PAE3582
  Cac:  CAC0478
  Cgl:  Cgl1508 Cgl2471_1
  Mtu:  Rv3042c_1
  MtC:  MT3127_1
  Mle:  ML1727_1
  Lla:  L172073
  Spn:  SP0238
  Lin:  lin0537
  Pae:  PA4960_1
  Nme:  NMB1653
  NmA:  NMA1909
_______

[S] COG3831 Uncharacterized conserved protein
  Fnu:  FN1060_1
  Dra:  DR2108_1 DR2173_1
  Nos:  alr7048
  Eco:  molR_g1_1 yfeS_1
  EcZ:  ZmolR.A_1 ZmolR.C_1
  Ecs:  ECs2921_1 ECs2923_1
  Atu:  AGpA658 AGpAbx353 AGpT223
  Mlo:  mlr9297 msl9076 msr9765
_______

[S] COG3832 Uncharacterized conserved protein
  Mac:  MA3610
  Tma:  TM0185
  Cac:  CAC3690
  Cgl:  Cgl0705
  Mtu:  Rv0576_2
  MtC:  MT0605_2
  Sau:  SA2116 SA2193
  Lin:  lin0420
  Bsu:  BS_yndB
  Bha:  BH0695 BH1534 BH2087
  Pae:  PA0808
  Rso:  RSc0992_1 RSc1959 RSp0181 RSp1319 RSp1350
  Atu:  AGc3005 AGc3674 AGc3685 AGl3582_2
  Sme:  SMa0191 SMb20256 SMb20607 SMb21007 SMc01149 SMc02226 SMc02638
        SMc03842
  Mlo:  mll2253 mll3558 mll3774 mll5358 mlr0110 mlr0746 mlr2174
        mlr2292 mlr3948 mlr3950 mlr8183
  Ccr:  CC3077
_______

[G] COG3833 ABC-type maltose transport systems, permease component
  Tac:  Ta0128
  Pab:  PAB0121
  Pya:  PAE3457
  Sso:  SSO1169
  Tma:  TM1202_2 TM1836_2
  Dra:  DR0563
  Lla:  L128697
  Spy:  SPy1296 SPy1299
  Spn:  SP2110
  Sau:  SA0209
  Lin:  lin2228
  Bsu:  BS_yvdI BS_yvfM
  Bha:  BH2021 BH2924
  Eco:  malG
  EcZ:  ZmalG
  Ecs:  ECs5015
  Ype:  YPO0854 YPO3716
  Sty:  STM4227
  Vch:  VCA0943
  Mpu:  MYPU_6400
_______

[KT] COG3835 Sugar diacid utilization regulator
  Cac:  CAC2833
  Bsu:  BS_ysfB
  Bha:  BH2731
  Eco:  yaeG
  EcZ:  ZyaeG
  Ecs:  ECs0166
  Ype:  YPO3978
  Sty:  STM0210
  Vch:  VCA0905
  Pae:  PA1050
  Hin:  HI0093
_______

[G] COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
  Dra:  DRA0291
  Sau:  SA0118
  Eco:  yfaU yhaF
  EcZ:  Z3503 ZyhaF
  Ecs:  ECs3130 ECs4004
  Ype:  YPO1767
  Sty:  STM1106 STM2289 STM3249
  Pae:  PA4128
  Pmu:  PM1535
  Rso:  RSc1591 RSp0423 RSp1613
  Atu:  AGc1872
  Sme:  SMc02778
  Bme:  BMEI1120 BMEII0139
  Mlo:  mll5426 mlr0073
_______

[S] COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain
  Cac:  CAC1388
  Nos:  all7319 alr1539
  Vch:  VCA0258
  Rso:  RSc2672
  Sme:  SMc01776
  Mlo:  mll2521_2
  Ccr:  CC0274
_______

[U] COG3838 Type IV secretory pathway, VirB2 components (pilins)
  Xfa:  XF2055 XFa0005
  Rso:  RSc2583
  Atu:  AGpA220 AGpT4 AGpT87
  Sme:  SMa1319
  Mlo:  mll9610 mlr6398 mlr9249
  Ccr:  CC2417
  Rpr:  RP192
  Rco:  RC0241
_______

[G] COG3839 ABC-type sugar transport systems, ATPase components
  Afu:  AF0092
  Hbs:  VNG6281G
  Mac:  MA0282 MA0323
  Mth:  MTH477 MTH920
  Mja:  MJ1367
  Mka:  MK1523
  Tac:  Ta0130 Ta0143 Ta0688 Ta1050
  Tvo:  TVN0208 TVN0546 TVN1146
  Pho:  PH0022 PH0157 PH0194 PH0203 PH0756 PH1350
  Pab:  PAB0103 PAB0123 PAB0545 PAB2232 PAB2336
  Pya:  PAE0023 PAE0063 PAE0328 PAE1222 PAE1321 PAE3571
  Sso:  SSO0367 SSO1003 SSO1168 SSO2713 SSO2850 SSO3069
  Ape:  APE0043 APE1635 APE1732 APE2060
  Aae:  aq_1222
  Tma:  TM0421 TM1232 TM1276
  Fnu:  FN0310
  Dra:  DR2153
  Cac:  CAC3237
  Cgl:  Cgl0217 Cgl0707 Cgl1353 Cgl2410
  Mtu:  Rv1238 Rv2038c Rv2832c
  MtC:  MT1276 MT2098 MT2898
  Mle:  ML1089 ML1424
  Lla:  L27865
  Spy:  SPy1976
  Spn:  SP1580
  Sau:  SA0206
  Lin:  lin0304
  Bsu:  BS_msmX BS_yurJ
  Bha:  BH1076 BH1140
  Syn:  slr0747 slr1224
  Nos:  all1823 alr4781
  Eco:  malK ugpC ycjV
  EcZ:  ZmalK ZugpC ZycjV
  Ecs:  ECs1897 ECs4296 ECs5018
  Ype:  YPO0609 YPO0857 YPO1720 YPO1896 YPO2480 YPO3469 YPO3712
        YPO3793
  Sty:  STM3554 STM4230
  Vch:  VC1552 VCA0946
  Pae:  PA2341 PA3187
  Pmu:  PM1454 PM1456 PM1763
  Xfa:  XF1067
  Rso:  RSc1267 RSc2140 RSc3046 RSc3047
  Cje:  Cj1538c
  Atu:  AGc1052 AGc2590 AGc3650 AGc4558 AGc4711 AGc533 AGc685
        AGl1016 AGl1223 AGl1292 AGl1771 AGl1904 AGl1907 AGl2946
        AGl2960 AGl3073 AGl3160 AGl3244 AGl3276 AGl3278 AGl3324
        AGl3356 AGl3396 AGl3411 AGl3418 AGl3567 AGl466 AGl604
        AGl621 AGl832 AGpA124 AGpA580 AGpA681 AGpA82
  Sme:  SMa0526 SMa0713 SMa0714 SMa1344 SMa1345 SMa2311 SMb20002
        SMb20156 SMb20235 SMb20328 SMb20419 SMb20630 SMb20661 SMb20972
        SMb21106 SMb21152 SMb21216 SMb21460 SMb21592 SMb21605 SMc01499
        SMc01624 SMc01625 SMc01980 SMc02474 SMc02518 SMc02519 SMc02869
        SMc03065 SMc04140 SMc04256 SMc04300 SMc04393
  Bme:  BMEI1713 BMEII0112 BMEII0481 BMEII0544 BMEII0593 BMEII0621 BMEII0750
        BMEII0940 BMEII0941
  Mlo:  mll0706 mll0708 mll0849 mll1716 mll3314 mll3378 mll3380
        mll3385 mll3499 mll3624 mll4923 mll5107 mll5297 mll5298
        mll7151 mlr2329 mlr3054 mlr3587 mlr3645 mlr4152 mlr4779
        mlr4917 mlr6440 mlr6654 mlr7004 mlr7095 mlr7224 mlr7266
        mlr7267 mlr8490 msr7236
  Tpa:  TP0804
  Mpu:  MYPU_0260 MYPU_0990 MYPU_4970 MYPU_6410
  Mpn:  MPN134_1 MPN134_3
  Mge:  MG187_1 MG187_3
_______

[H] COG3840 ABC-type thiamine transport system, ATPase component
  Eco:  thiQ
  EcZ:  ZyabJ
  Ecs:  ECs0070
  Ype:  YPO0520
  Sty:  STM0106
  Vch:  VC2537
  Hin:  HI1021
  Pmu:  PM0378
  Atu:  AGc4916
  Sme:  SMc03871
  Bme:  BMEI0283
  Mlo:  mll3864
_______

[E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components
  Afu:  AF1608
  Hbs:  VNG0921G VNG1871G VNG2397G
  Mac:  MA1235 MA2282 MA3903
  Pya:  PAE0360 PAE1363 PAE2890
  Ape:  APE0944
  Tma:  TM1376
  Fnu:  FN0376 FN1797
  Dra:  DR0062 DR1302
  Cac:  CAC0840
  Cgl:  Cgl0421
  Lla:  L175357
  Spy:  SPy1102
  Spn:  SP0242 SP1389 SP1825
  Sau:  SA0950
  Lin:  lin0797 lin1031
  Bha:  BH0512
  Syn:  sll1878
  Nos:  all5044 alr1384
  Eco:  afuC potA potG ydcT
  EcZ:  Z2278 ZafuC ZpotA ZpotG
  Ecs:  ECs0413 ECs0935 ECs1571 ECs2045
  Ype:  YPO1332 YPO2846 YPO2960 YPO3048
  Sty:  STM0428 STM0878 STM1226
  Vch:  VC0610 VC1428 VCA0602 VCA0687
  Pae:  PA0206 PA0302 PA0326 PA0603 PA3254 PA3538 PA3607
  Hin:  HI0099 HI0126 HI1347
  Pmu:  PM0049 PM0264 PM0957
  Nme:  NMB0610 NMB0632 NMB2042
  NmA:  NMA0393 NMA0816 NMA0842
  Rso:  RSc1734 RSc1794 RSc2939
  Cje:  Cj0173c Cj0732
  Atu:  AGc1086 AGc3896 AGc714 AGl1231 AGl193 AGl3441 AGl589
        AGl887 AGpA185 AGpA353 AGpA598 AGpA620
  Sme:  SMa0391 SMa0803 SMa0953 SMa1754 SMa2207 SMb20281 SMb20363
        SMb20380 SMb21276 SMb21541 SMc00771 SMc01608 SMc01631 SMc01653
        SMc01965 SMc02068
  Bme:  BMEI0412 BMEII0193 BMEII0567 BMEII0583 BMEII0922 BMEII1123
  Mlo:  mll0232 mll1738 mll2890 mll2948 mll3065 mll6255 mll7187
        mll8445 mlr2024 mlr2025 mlr3498 mlr3666 mlr4193 mlr5382
        mlr6079 mlr6534 mlr6965 mlr7387 mlr7543 mlr7674 mlr9014
        mlr9378
  Ccr:  CC3134
  Tpa:  TP0142 TP0652
  Bbu:  BB0642
  Uur:  UU107_1 UU107_3
  Mpu:  MYPU_4250
  Mpn:  MPN055_1 MPN055_3
  Mge:  MG042_1 MG042_3
_______

[U] COG3843 Type IV secretory pathway, VirD2 components (relaxase)
  Spn:  SP1056_1
  Xfa:  XFa0047_1
  Rso:  RSc2601
  Hpy:  HP0436 HP0987 HP0996_1 HP1004
  jHp:  jhp0942_1
  Atu:  AGpT21
  Mlo:  mll9292 mlr6191 mlr9746
_______

[E] COG3844 Kynureninase
  Hbs:  VNG0915G
  Sce:  YLR231c
  Dra:  DRA0338
  Pae:  PA2080
  Rso:  RSc0759
  Mlo:  mll0621
_______

[R] COG3845 ABC-type uncharacterized transport systems, ATPase components
  Afu:  AF0887
  Hbs:  VNG0901G
  Pho:  PH1713
  Pab:  PAB0303
  Pya:  PAE3120 PAE3413
  Ape:  APE0063 APE2588
  Tma:  TM0103
  Dra:  DR0957
  Cac:  CAC0703
  Lla:  L165279
  Spy:  SPy1227
  Spn:  SP0846
  Lin:  lin1426
  Bsu:  BS_yufO
  Nos:  alr5362
  Pae:  PA0136
  Rso:  RSc2173
  Atu:  AGc202 AGc3297
  Sme:  SMa1509 SMa2127 SMa2365 SMb20124 SMc00245 SMc04127
  Bme:  BMEII0085 BMEII0698
  Mlo:  mll0504 mll4176 mlr3154 mlr6802 mlr7066
  Tpa:  TP0300 TP0321
  Bbu:  BB0677
  Uur:  UU015
  Mpu:  MYPU_6190
  Mpn:  MPN258
  Mge:  MG119
_______

[U] COG3846 Type IV secretory pathway, TrbL components
  Xfa:  XF2046 XFa0037
  Rso:  RSc2578
  Hpy:  HP0037
  jHp:  jhp0033 jhp0937 jhp0949
  Atu:  AGpT76
  Mlo:  mll9606 mlr6402
_______

[U] COG3847 Flp pilus assembly protein, pilin Flp
  Pae:  PA4306
  Pmu:  PM0855
  Rso:  RSc0658 RSc0659 RSc0660 RSc0661 RSp1092
  Atu:  AGc383
  Sme:  SMa1570 SMc02446 SMc04114
  Mlo:  msl3456 msl6482 msr5593
  Ccr:  CC0832 CC2948
_______

[T] COG3848 Phosphohistidine swiveling domain
  Hbs:  VNG0324G_2
  Sau:  SA1520_2
  Lin:  lin1605_2
  Bsu:  BS_pykA_2
  Bha:  BH3163_2
  Syn:  sll1275_2
  Nos:  all4008_2
_______

[T] COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific
  Eco:  narQ narX
  EcZ:  ZnarQ ZnarX
  Ecs:  ECs1727 ECs3331
  Ype:  YPO1959
  Sty:  STM1766 STM2480
  Vch:  VCA0675
  Pae:  PA3878
  Hin:  HI0267
  Pmu:  PM1591
  Nme:  NMB1249
  NmA:  NMA1418
  Rso:  RSp0979
_______

[T] COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific
  Eco:  uhpB
  EcZ:  Z0462 ZuhpB
  Ecs:  ECs0417 ECs4605
  Sty:  STM3789
  Vch:  VCA0683
  Pmu:  PM1339
_______

[T] COG3852 Signal transduction histidine kinase, nitrogen specific
  Eco:  glnL
  EcZ:  ZglnL
  Ecs:  ECs4791
  Ype:  YPO0023
  Sty:  STM4006
  Vch:  VC2748
  Pae:  PA5124
  Xfa:  XF1849
  Rso:  RSc1260
  Atu:  AGc2663
  Sme:  SMc01042
  Bme:  BMEI0865
  Mlo:  mlr0397
  Ccr:  CC1740
_______

[P] COG3853 Uncharacterized protein involved in tellurite resistance
  Mac:  MA2455
  Dra:  DR1127
  Cac:  CAC1411 CAC2994
  Lla:  L174389
  Spy:  SPy0158
  Sau:  SA1238
  Lin:  lin2081
  Bsu:  BS_yaaN BS_yceH
  Bha:  BH1726
_______

[S] COG3854 Uncharacterized protein conserved in bacteria
  Cac:  CAC2093
  Bsu:  BS_spoIIIAA
  Bha:  BH2797
  Syn:  slr0692
  Nos:  alr2309
_______

[G] COG3855 Uncharacterized protein conserved in bacteria
  Fnu:  FN0798
  Cac:  CAC1572
  Lla:  L54021
  Sau:  SA2304
  Lin:  lin0825
  Bsu:  BS_fbp
_______

[S] COG3856 Uncharacterized conserved protein (small basic protein)
  Cac:  CAC2123
  Mtu:  Rv1824
  MtC:  MT1872
  Bsu:  BS_sbp
  Bha:  BH2560
_______

[L] COG3857 ATP-dependent nuclease, subunit B
  Cac:  CAC2263
  Lla:  L0252
  Spy:  SPy0776
  Spn:  SP1151
  Sau:  SA0827
  Lin:  lin2369
  Bsu:  BS_addB
  Bha:  BH2981
_______

[R] COG3858 Predicted glycosyl hydrolase
  Cac:  CAC1556 CAC2747
  Bsu:  BS_yaaH BS_ydhD BS_ykvQ BS_yvbX
  Bha:  BH0017 BH2292 BH3513
  Xfa:  XF0848
_______

[S] COG3859 Predicted membrane protein
  Cac:  CAC2928
  Lla:  L116212
  Spy:  SPy0600
  Lin:  lin1468
  Bsu:  BS_yuaJ
  Bha:  BH0830
_______

[S] COG3860 Uncharacterized protein conserved in bacteria
  Dra:  DR0234
  Cac:  CAC0445_2
  Bha:  BH0677_2
  Nos:  alr1044_2
_______

[S] COG3861 Uncharacterized protein conserved in bacteria
  Dra:  DR1314 DR1315
  Cac:  CAC0786 CAC0787
  Bsu:  BS_ysnF
  Nos:  all4050 all4051 all5315 alr5332
_______

[S] COG3862 Uncharacterized protein with conserved CXXC pairs
  Pab:  PAB0185
  Tma:  TM1434
  Fnu:  FN0181
  Cac:  CAC0013 CAC1324
_______

[S] COG3863 Uncharacterized distant relative of cell wall-associated hydrolases
  Afu:  AF1513
  Cac:  CAC0029
  Bsu:  BS_yycO
_______

[S] COG3864 Uncharacterized protein conserved in bacteria
  Tma:  TM0929
  Dra:  DR1169
  Cac:  CAC1857
_______

[S] COG3865 Uncharacterized protein conserved in bacteria
  Cac:  CAC3467
  Cgl:  Cgl1954
  Lla:  L145420
  Sau:  SA1050
  Lin:  lin1104
  Pae:  PA1358 PA2721
  Rso:  RSp0597
  Atu:  AGl3426
  Sme:  SMa0139 SMb20475 SMb20655
  Mlo:  mll5357
_______

[G] COG3866 Pectate lyase
  Tma:  TM0433
  Cac:  CAC0804
  Bsu:  BS_pel BS_pelB
  Bha:  BH0698 BH3819
_______

[G] COG3867 Arabinogalactan endo-1,4-beta-galactosidase
  Tma:  TM1201
  Cac:  CAC2570
  Bsu:  BS_yvfO
  Bha:  BH2023
  Ype:  YPO0853
_______

[S] COG3868 Uncharacterized conserved protein
  Aae:  aq_1993
  Dra:  DR0164 DR0706
  Cac:  CAC0736
  Pae:  PA3064
  Rso:  RSc2276 RSc3137
_______

[E] COG3869 Arginine kinase
  Cac:  CAC3190
  Sau:  SA0482
  Lin:  lin0263
  Bsu:  BS_yacI
  Bha:  BH0102
  Ctr:  CT675
  Cpn:  CPn0701
_______

[S] COG3870 Uncharacterized protein conserved in bacteria
  Dra:  DR1423
  Cac:  CAC0299
  Sau:  SA0441
  Lin:  lin2840
  Bsu:  BS_yaaQ
  Bha:  BH0043 BH0950
_______

[R] COG3871 Uncharacterized stress protein (general stress protein 26)
  Dra:  DR1146 DR1181
  Cac:  CAC3491
  Sau:  SA2170
  Lin:  lin2891
  Bsu:  BS_ydaG
  Nos:  alr3246
  Atu:  AGl2213
_______

[R] COG3872 Predicted metal-dependent enzyme
  Tma:  TM1550
  Fnu:  FN1092
  Cac:  CAC2886
  Lin:  lin1390
  Bsu:  BS_yqhQ
  Bha:  BH2803
_______

[S] COG3874 Uncharacterized conserved protein
  Mac:  MA0337
  Mth:  MTH626
  Cac:  CAC2059 CAC3264
  Bsu:  BS_ytfJ
  Bha:  BH3195
_______

[S] COG3875 Uncharacterized conserved protein
  Afu:  AF0049
  Mac:  MA1312 MA1313
  Tma:  TM0442
  Cac:  CAC0769
_______

[S] COG3876 Uncharacterized protein conserved in bacteria
  Cac:  CAC0185
  Bsu:  BS_ybbC
  Bha:  BH0674
  Ctr:  CT605
  Cpn:  CPn0776
_______

[S] COG3877 Uncharacterized protein conserved in bacteria
  Tma:  TM0339
  Dra:  DR0017
  Cac:  CAC3001
_______

[S] COG3878 Uncharacterized protein conserved in bacteria
  Fnu:  FN1221
  Dra:  DR2173_2
  Cac:  CAC0820
  Sau:  SA0761 SAS022
  Lin:  lin2486 lin2487
  Bsu:  BS_ywqG
_______

[S] COG3879 Uncharacterized protein conserved in bacteria
  Cac:  CAC2122 CAC2124
  Mtu:  Rv0012 Rv1823 Rv1825
  MtC:  MT0015 MT1871 MT1873
  Bsu:  BS_ylxW BS_ylxX
  Bha:  BH2561 BH2562
_______

[S] COG3880 Uncharacterized protein with conserved CXXC pairs
  Cac:  CAC3191
  Sau:  SA0481
  Lin:  lin0262
  Bsu:  BS_yacH
  Bha:  BH0101
  Ctr:  CT676
  Cpn:  CPn0700
_______

[S] COG3881 Uncharacterized protein conserved in bacteria
  Dra:  DR0894
  Cac:  CAC1676
  Bsu:  BS_yrrD
  Bha:  BH1264
_______

[Q] COG3882 Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
  Cac:  CAC2199 CAC3312
  Bha:  BH1845
  Cje:  Cj1302
  Sme:  SMb20840 SMb20841 SMc01554
_______

[S] COG3883 Uncharacterized protein conserved in bacteria
  Cac:  CAC0308_1 CAC0309_1 CAC3033_1
  Lla:  L188798_1 L96658_1
  Spy:  SPy0019_1
  Spn:  SP2216_1
  Lin:  lin2647_1 lin2648_1
  Bsu:  BS_yvcE_1
  Bha:  BH3600_1
_______

[I] COG3884 Acyl-ACP thioesterase
  Cac:  CAC3591
  Mtu:  Rv0466 Rv2001
  MtC:  MT0482 MT2057
  Mle:  ML2463
  Lla:  L155662
  Spy:  SPy1042
  Spn:  SP1408
_______

[S] COG3885 Uncharacterized conserved protein
  Tac:  Ta1420
  Tvo:  TVN1439
  Pho:  PH0757
  Pab:  PAB0865
  Sso:  SSO1962
  Cac:  CAC1420_1
_______

[L] COG3886 Predicted HKD family nuclease
  Mac:  MA1603_1
  Fnu:  FN1974_1
  Cac:  CAC2824_1
  Cgl:  Cgl1126_1
  Sau:  SA2277_1
  Vch:  VC0812_1
  Hpy:  HP1499
  jHp:  jhp1392
_______

[T] COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
  Cac:  CAC3718
  Lla:  L151062
  Spy:  SPy2184
  Spn:  SP2205
  Sau:  SA0013
  Lin:  lin0045
  Bsu:  BS_yybT
  Bha:  BH4031
  Mpu:  MYPU_5170
_______

[K] COG3888 Predicted transcriptional regulator
  Afu:  AF1742
  Tac:  Ta0549
  Tvo:  TVN0603
  Sso:  SSO0365
_______

[R] COG3889 Predicted solute binding protein
  Pho:  PH1962
  Pab:  PAB1193
  Pya:  PAE3088
  Sso:  SSO1273
  Ape:  APE1583
_______

[I] COG3890 Phosphomevalonate kinase
  Sso:  SSO2988
  Sce:  YMR220w
  Spo:  SPAC343.01c
  Bbu:  BB0687
_______

[S] COG3892 Uncharacterized protein conserved in bacteria
  Ype:  YPO2585_2
  Sty:  STM4429
  Rso:  RSc1240_2
  Atu:  AGl714_2
  Sme:  SMc01165_2
  Bme:  BMEII0572_2
  Mlo:  mll4982_2
  Ccr:  CC1298_2
_______

[L] COG3893 Inactivated superfamily I helicase
  Rso:  RSc1189_1
  Hpy:  HP1089_1
  jHp:  jhp0336_1
  Cje:  Cj1482c_1
  Atu:  AGc40_1
  Sme:  SMc02759_1
  Bme:  BMEI2024_1
  Mlo:  mll5084_1
  Ccr:  CC3537_1
_______

[R] COG3894 Uncharacterized metal-binding protein
  Afu:  AF0010 AF0691
  Mac:  MA0150_1 MA0849_1 MA3972_1 MA4380_1
  Sme:  SMc04347
  Mlo:  mlr1245
_______

[R] COG3895 Predicted periplasmic protein
  Syn:  slr0581
  Eco:  ydhA
  EcZ:  ZydhA
  Ecs:  ECs2348
  Ype:  YPO2371
  Sty:  STM1447
  Pae:  PA0867
  Rso:  RSc2496
  Atu:  AGc3587
  Sme:  SMc03106_2
  Bme:  BMEI1494
_______

[V] COG3896 Chloramphenicol 3-O-phosphotransferase
  Mtu:  Rv2636
  MtC:  MT2714
  Sme:  SMc04451
  Mlo:  mll3789
_______

[R] COG3897 Predicted methyltransferase
  Sce:  YLR285w
  Spo:  SPAC8F11.09c
  Pae:  PA4059 PA4060
  Atu:  AGc4799
  Sme:  SMc03226
  Bme:  BMEI0171
  Mlo:  mll5414 mlr4229
  Ccr:  CC2585 CC3423
_______

[S] COG3898 Uncharacterized membrane-bound protein
  Atu:  AGc4816
  Sme:  SMc03234
  Bme:  BMEI0179
  Mlo:  mll4218
  Ccr:  CC0075
_______

[R] COG3899 Predicted ATPase
  Spo:  SPAC27E2.09_2 SPCC74.06_2
  Fnu:  FN1400_2
  Cac:  CAC2623_1
  Mle:  ML2341_2
  Spy:  SPy2091_2
  Nos:  all0323_2 all0886_2 all1625_2 all2282_2 all3557_2 all3691_2 all4687_2
        alr0354_2 alr0709_2 alr0710_2 alr0900_2 alr2258_2 alr2682_2
  Sme:  SMa0464_2 SMa1591_2 SMa1789_2 SMc01491_2
  Mlo:  mll0576_2 mll4526_1 mlr3277_2
_______

[S] COG3900 Predicted periplasmic protein
  Syn:  slr1773
  Sme:  SMa0604 SMa0626_2
  Mlo:  mlr5472
_______

[K] COG3901 Regulator of nitric oxide reductase transcription
  Pae:  PA3391_1
  Nme:  NMB0577
  NmA:  NMA0761
  Rso:  RSp1369_1
  Sme:  SMa1179_1
  Bme:  BMEII0975_1
_______

[R] COG3903 Predicted ATPase
  Mtu:  Rv0386_2 Rv0890c_1 Rv0894 Rv1358_2 Rv2488c_2
  MtC:  MT0399_2 MT0914_1 MT0918 MT1402_2 MT2563_2
  Mle:  ML1753_2
  Sme:  SMa1591_3 SMa1789_3 SMc01491_3
  Mlo:  mll0576_3 mlr6681_2 mlr6873_2
_______

[S] COG3904 Predicted periplasmic protein
  Pae:  PA4118
  Sme:  SMb20360
  Mlo:  mlr0266 mlr4687
_______

[K] COG3905 Predicted transcriptional regulator
  Pae:  PA0125
  Xfa:  XF2075
  Atu:  AGc3279 AGl816
  Sme:  SMb20628
  Mlo:  msr2423
  Ccr:  CC1054 CC2514
_______

[S] COG3906 Uncharacterized protein conserved in bacteria
  Tma:  TM0606
  Cac:  CAC1681
  Lla:  L142332
  Spy:  SPy2112
  Spn:  SP0194
  Sau:  SA1443
  Lin:  lin1536
  Bsu:  BS_yrzB
  Bha:  BH1270
_______

[R] COG3907 PAP2 (acid phosphatase) superfamily protein
  Ype:  YPO1325
  Pae:  PA4382
  Xfa:  XF0374
_______

[S] COG3908 Uncharacterized protein conserved in bacteria
  Atu:  AGc1259
  Sme:  SMc00933
  Bme:  BMEII1027
  Mlo:  msl8272
  Ccr:  CC2247
_______

[C] COG3909 Cytochrome c556
  Pae:  PA0541
  Nme:  NMB0923
  NmA:  NMA1119
  Atu:  AGc1607
  Sme:  SMc00045
  Mlo:  mlr7638
_______

[R] COG3910 Predicted ATPase
  Mac:  MA0995
  Cgl:  Cgl2765 Cgl2766
  Bha:  BH0315
  Atu:  AGc3902
  Mlo:  mlr8463
_______

[R] COG3911 Predicted ATPase
  Vch:  VC2743
  Atu:  AGc4391
  Mlo:  mlr1469
  Ccr:  CC0868
_______

[S] COG3913 Uncharacterized protein conserved in bacteria
  Pae:  PA0076
  Rso:  RSp0762
  Atu:  AGl1064_1
  Mlo:  mlr2350
_______

[O] COG3914 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
  Syn:  slr1816
  Nos:  all0562 alr0558_2
  Atu:  AGl1760
  Ccr:  CC0119_2 CC1107 CC3718
_______

[S] COG3915 Uncharacterized protein conserved in bacteria
  Vch:  VC1933 VCA0075
  Pae:  PA2869
  Atu:  AGl2662
_______

[TQ] COG3916 N-acyl-L-homoserine lactone synthetase
  Ype:  YPO0984 YPO2456
  Pae:  PA1432 PA3476
  Rso:  RSc3286 RSp0779
  Atu:  AGpT91
  Sme:  SMc00168
  Mlo:  mlr5638 mlr6103 mlr6385 mlr9546
_______

[Q] COG3917 2-hydroxychromene-2-carboxylate isomerase
  Pae:  PA0118
  Rso:  RSc0273
  Atu:  AGpA622
  Ccr:  CC0643 CC1171
_______

[S] COG3918 Predicted membrane protein
  Mtu:  Rv2120c
  MtC:  MT2180
  Atu:  AGpA804
  Mlo:  mlr2767
_______

[R] COG3919 Predicted ATP-grasp enzyme
  Lla:  L93420
  Atu:  AGl1972_1
  Mlo:  mll1183
_______

[T] COG3920 Signal transduction histidine kinase
  Mac:  MA0203_4 MA0490_2 MA0551_4 MA0552_2 MA0619_3 MA0620_3 MA0758_2
        MA0759_2 MA0970_4 MA1267_3 MA1274_2 MA1322_2 MA1463_2 MA1470_2
        MA1627_2 MA1628_4 MA1630_4 MA1645_2 MA1646_4 MA1704_2 MA1844_2
        MA1878_3 MA1991_2 MA2082_2 MA2266_4 MA2732_2 MA2757_2 MA2784_2
        MA2890_4 MA3346_2 MA3370_3 MA3481_3 MA3543_2 MA4026_2
  Mth:  MTH1124 MTH123 MTH1260 MTH174_3 MTH292 MTH356 MTH360_3
        MTH446_3 MTH459 MTH468_3 MTH619_3 MTH823_3 MTH901_2 MTH902_3
        MTH985
  Fnu:  FN0077 FN1915
  Cac:  CAC2720
  Mtu:  Rv3220c
  MtC:  MT3316
  Mle:  ML0803
  Lin:  lin1137
  Syn:  slr1212_3
  Nos:  all1280_4 all2095_3 all2239_4 all3347_2 alr5151_2 asr0358
  Atu:  AGc3610_2 AGc3616_2 AGl1379 AGl1382 AGpA130 AGpA542_2 AGpA543_2
        AGpA788_2
  Sme:  SMa0113_2 SMa1001 SMa1696 SMa2063 SMb20515_4 SMb20933_4 SMc00322
        SMc01507_3
  Bme:  BMEI0370 BMEI0374 BMEII0679_2
  Mlo:  mll1798_2 mll2301 mll3709_2 mll9598 mll9655_2 mlr1749 mlr3690_3
        mlr3704 mlr5739_2 mlr6761_2 mlr8083 mlr8084_2 mlr9591_2 mlr9680
        mlr9681_2
  Ccr:  CC0285_2 CC0629 CC0836_2 CC1683 CC2554 CC2909 CC3048_2
        CC3058_2 CC3170_2 CC3198 CC3474 CC3560_3
_______

[S] COG3921 Uncharacterized protein conserved in bacteria
  Sty:  STM0381
  Pae:  PA3681
  Atu:  AGc3501 AGc4159
  Sme:  SMc02727 SMc04225
  Bme:  BMEI0504 BMEI1134
  Mlo:  mlr2573
_______

[L] COG3923 Primosomal replication protein N''
  Eco:  priC
  EcZ:  ZpriC
  Ecs:  ECs0520
  Ype:  YPO3127
  Sty:  STM0481
  Vch:  VC1857
  Hin:  HI0326
  Pmu:  PM0990
_______

[S] COG3924 Predicted membrane protein
  Eco:  yhdT
  EcZ:  ZyhdT
  Ecs:  ECs4129
  Ype:  YPO3657a
  Sty:  STM3381
  Hin:  HI0974.1
  Pmu:  PM1090
_______

[G] COG3925 N-terminal domain of the phosphotransferase system fructose-specific component IIB
  Eco:  fruA_1
  EcZ:  ZfruA_1
  Ecs:  ECs3059_1
  Ype:  YPO1300_1
  Sty:  STM2204_1
  Hin:  HI0446_1
  Pmu:  PM1795_1
_______

[R] COG3926 Putative secretion activating protein
  Sty:  STM0016
  Nme:  NMB1012
  NmA:  NMA1230
  Sme:  SMb20828
  Bme:  BMEI0995 BMEI1110
  Mlo:  mll2266_1 mlr8035 mlr8547 mlr9752
_______

[S] COG3930 Uncharacterized protein conserved in bacteria
  Vch:  VCA1023_2
  Pae:  PA3697
  Atu:  AGl1417
  Sme:  SMb21585
_______

[E] COG3931 Predicted N-formylglutamate amidohydrolase
  Pae:  PA5509
  Atu:  AGc3887 AGl2148
  Sme:  SMc01600 SMc02354 SMc04007
  Bme:  BMEI0290 BMEII0555
  Mlo:  mll3076 mlr3822
_______

[R] COG3932 Uncharacterized ABC-type transport system, permease components
  Syn:  slr1875
  Nos:  all1787 alr2882
  Atu:  AGc2262
  Sme:  SMb21582 SMc00353
  Ccr:  CC3598
_______

[K] COG3933 Transcriptional antiterminator
  Cac:  CAC0382_2
  Lin:  lin0778_2 lin1832_2
  Bsu:  BS_levR_2
  Sty:  STM0571_2 STM3773_2 STM4534_2
_______

[G] COG3934 Endo-beta-mannanase
  Tvo:  TVN0690
  Sso:  SSO3007
  Tma:  TM1227
  Ccr:  CC0801
_______

[L] COG3935 Putative primosome component and related proteins
  Cac:  CAC3587
  Lla:  L0285
  Spy:  SPy0928 SPy0953 SPy1482
  Spn:  SP1136 SP1575
  Sau:  SA1286 SA1791
  Lin:  lin0086 lin2009 lin2412
  Bsu:  BS_dnaD
  Bha:  BH1697 BH3542
_______

[G] COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation
  Cac:  CAC1402
  Sau:  SA2462
  Bsu:  BS_yfiQ
_______

[S] COG3937 Uncharacterized conserved protein
  Mac:  MA2622
  Cac:  CAC0034
  Bha:  BH2709
  Syn:  slr0058 slr0455
  Nos:  all1164 alr0576
_______

[E] COG3938 Proline racemase
  Pae:  PA1255 PA1268
  Atu:  AGc701 AGl1800 AGl395
  Sme:  SMb20268 SMb20270
  Bme:  BMEI0257 BMEI1586
  Mlo:  mll3979 mlr6810
_______

[R] COG3940 Predicted beta-xylosidase
  Cac:  CAC1529
  Bha:  BH1867
  Sty:  STM0148
_______

[R] COG3941 Mu-like prophage protein
  Ecs:  ECs4982
  Ype:  YPMT1.11c_2
  Vch:  VC1791
  Pae:  PA0625
  Hin:  HI1514
_______

[R] COG3942 Surface antigen
  Lla:  L159324_2 L41820_2 L96658_2
  Spy:  SPy0019_2 SPy0031 SPy1801 SPy2025
  Spn:  SP2201_1 SP2216_2
  Sau:  SA0265_1 SA0270 SA0423_2 SA0620_2 SA0710_2 SA2093 SA2097
        SA2332 SA2353 SA2437_2
  Ccr:  CC0349
_______

[R] COG3943 Virulence protein
  Ype:  YPO4026
  Sty:  STM3755
  Pae:  PA2733
  Nme:  NMB0830
  NmA:  NMA1039
_______

[M] COG3944 Capsular polysaccharide biosynthesis protein
  Cac:  CAC3044 CAC3061
  Cgl:  Cgl0343_1
  Spn:  SP0348
  Sau:  SA0144 SA2457
  Bsu:  BS_yveK BS_ywqC
  Bha:  BH3669
_______

[S] COG3945 Uncharacterized conserved protein
  Pya:  PAE2680
  Sso:  SSO1869
  Ape:  APE1258
  Cac:  CAC0760 CAC2488
  Vch:  VC2358
_______

[U] COG3946 Type IV secretory pathway, VirJ component
  Pae:  PA0919
  Xfa:  XF0754 XF2679
  Rso:  RSp1521
  Atu:  AGc4582
  Sme:  SMc00612 SMc00613
  Bme:  BMEII0681
_______

[T] COG3947 Response regulator containing CheY-like receiver and SARP domains
  Dra:  DR2556
  Cac:  CAC3390 CAP0009
  Bha:  BH2016
_______

[R] COG3948 Phage-related baseplate assembly protein
  Sty:  STM2708 STM4202
  Pae:  PA0618
  Xfa:  XF0724 XF2488
  Rso:  RSc1923
_______

[S] COG3949 Uncharacterized membrane protein
  Pho:  PH0137
  Pab:  PAB0085
  Cac:  CAC3241
  Cgl:  Cgl1071
  Sau:  SA0609 SA2305
  Bsu:  BS_ykvI BS_yyaD
  Bha:  BH4053
_______

[R] COG3950 Predicted ATP-binding protein involved in virulence
  Sty:  STM2746 STM3753
  Vch:  VC2386
  Sme:  SMc02153
_______

[MNO] COG3951 Rod binding protein
  Eco:  flgJ_1
  EcZ:  ZflgJ_1
  Ecs:  ECs1459_1
  Ype:  YPO0731 YPO1807_1
  Sty:  STM1182_1
  Buc:  BU345
  Vch:  VC2192_1
  Pae:  PA1085_1
  Rso:  RSp0350_1
  Tpa:  TP0959
_______

[S] COG3952 Predicted membrane protein
  Xfa:  XF2277
  Atu:  AGc4037
  Mlo:  mlr0010
  Ctr:  CT411_1
  Cpn:  CPn0965_1
_______

[R] COG3953 SLT domain proteins
  Cac:  CAC1120_2 CAC1883_2
  Mtu:  Rv3896c
  MtC:  MT4012
  Lla:  L25762_2 L72137_2
  Sau:  SA1766_4
  Bsu:  BS_xkdO_2 BS_yqbO_3
_______

[C] COG3954 Phosphoribulokinase
  Eco:  prkB
  EcZ:  ZprkB
  Ecs:  ECs4206
  Ype:  YPO0178
  Sty:  STM3464
  Vch:  VC2613
  Sme:  SMb20201
_______

[M] COG3955 Exopolysaccharide biosynthesis protein
  Cac:  CAC2184 CAC2185
  Spn:  SP0907_2
  Hin:  HI1244
_______

[R] COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain
  Cac:  CAC3212
  Sau:  SA0463
  Bsu:  BS_yabN
  Bha:  BH0072
_______

[G] COG3957 Phosphoketolase
  Spo:  SPBC24C6.09c
  Cac:  CAC1343
  Lla:  L138230
  Syn:  sll0529 slr0453
  Nos:  all1483 all2567 alr1850
  Pae:  PA3613
  Sme:  SMa1084 SMc04146
  Bme:  BMEII0881
  Mlo:  mlr6575
_______

[G] COG3958 Transketolase, C-terminal subunit
  Mja:  MJ0679
  Tac:  Ta0617
  Tvo:  TVN0667
  Pab:  PAB0296
  Pya:  PAE1927
  Sso:  SSO0299
  Ape:  APE0583
  Tma:  TM0953
  Fnu:  FN0295
  Spn:  SP2127
  Ype:  YPO3313
  Sty:  STM2340
  Atu:  AGc3491
  Sme:  SMc00269
  Mlo:  mll5764
_______

[G] COG3959 Transketolase, N-terminal subunit
  Mja:  MJ0681
  Tac:  Ta0618
  Tvo:  TVN0668
  Pab:  PAB0295
  Pya:  PAE1929
  Sso:  SSO0297
  Ape:  APE0586
  Tma:  TM0954
  Fnu:  FN0294
  Spn:  SP2128
  Ype:  YPO3314
  Sty:  STM2341
  Atu:  AGc3490
  Sme:  SMc00270
  Mlo:  mll5765
_______

[R] COG3960 Glyoxylate carboligase
  Eco:  gcl
  EcZ:  Zgcl
  Ecs:  ECs0568
  Sty:  STM0517
  Pae:  PA1502
  Rso:  RSc3281
  Sme:  SMb20681
  Mlo:  mlr0251
_______

[GHR] COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes
  Mac:  MA0594
  Sce:  YDL080c YDR380w YGR087c YLR044c YLR134w
  Spo:  SPAC13A11.06 SPAC186.09 SPAC1F8.07c SPAC3G9.11c
  Cac:  CAP0025
  Mtu:  Rv0853c
  MtC:  MT0876
  Mle:  ML2167
  Lla:  L138640
  Sau:  SA0182
  Sty:  STM2405
_______

[E] COG3962 Acetolactate synthase
  Cgl:  Cgl0162
  Lin:  lin0404
  Bsu:  BS_iolD
  Bha:  BH2318
  Ype:  YPO2578
  Sty:  STM4431 STM4432
  Rso:  RSc1239
  Atu:  AGl716
  Sme:  SMc01166
  Bme:  BMEII0571
  Mlo:  mll4981
  Ccr:  CC1299
_______

[I] COG3963 Phospholipid N-methyltransferase
  Bha:  BH2056
  Ype:  YPO3216
  Atu:  AGc518
  Sme:  SMc00414
  Bme:  BMEI2000
  Mlo:  mll4753 mlr5374
_______

[R] COG3964 Predicted amidohydrolase
  Sty:  STM4413 STM4445
  Atu:  AGl3103
  Mlo:  mll4451
_______

[P] COG3965 Predicted Co/Zn/Cd cation transporters
  Bha:  BH0427
  Ype:  YPO2505
  Vch:  VCA0834
  Atu:  AGc1819
  Sme:  SMa0683
_______

[M] COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
  Lla:  L88729
  Spy:  SPy1309
  Spn:  SP2173
  Sau:  SA0796
  Lin:  lin0970
  Bsu:  BS_dltD
_______

[M] COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
  Cac:  CAC0536
  Lla:  L144410
  Bsu:  BS_dltE
  Nos:  alr4011
  Rso:  RSc3200 RSc3201
  Atu:  AGc1580
  Sme:  SMb21384
_______

[R] COG3968 Uncharacterized protein related to glutamine synthetase
  Dra:  DR2033
  Cac:  CAC2658
  Syn:  slr0288
_______

[R] COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase
  Lla:  L151001
  Spy:  SPy0189
  Lin:  lin1347
  Eco:  ybdN
  EcZ:  Z1203 Z1643 ZybdN
  Ecs:  ECs0641 ECs1386
  Sty:  STM0605
  Pae:  PA2127
  Rso:  RSp1619
_______

[R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein
  Sso:  SSO3118
  Ype:  YPO1289
  Atu:  AGc4970
  Sme:  SMa0247
  Mlo:  mll7369
  Ccr:  CC0823
_______

[Q] COG3971 2-keto-4-pentenoate hydratase
  Dra:  DRA0122
  Mtu:  Rv3536c
  MtC:  MT3640
  Eco:  mhpD
  EcZ:  ZmhpD
  Ecs:  ECs0405
  Ype:  YPO1766
  Sty:  STM1105
  Pae:  PA4127
  Pmu:  PM1534
  Rso:  RSp0891 RSp0892 RSp0899
  Atu:  AGl566
  Bme:  BMEII0138
  Ccr:  CC1509
_______

[R] COG3972 Superfamily I DNA and RNA helicases
  Sty:  STM2767
  Pae:  PA1372
  Xfa:  XF2662 XF2663
  Atu:  AGc765
_______

[R] COG3973 Superfamily I DNA and RNA helicases
  Dra:  DR1572
  Cac:  CAC0603 CAC1026
  Cgl:  Cgl1339
  Bsu:  BS_yvgS
_______

[R] COG3975 Predicted protease with the C-terminal PDZ domain
  Sso:  SSO2575
  Syn:  slr0031
  Nos:  alr2326
  Nme:  NMB1726
  NmA:  NMA1981
  Rso:  RSc2890
  Ccr:  CC2539 CC3051 CC3287
  Rco:  RC0445
_______

[S] COG3976 Uncharacterized protein conserved in bacteria
  Cac:  CAC2762_2 CAC2767
  Mlo:  mll6621
  Tpa:  TP0572_2
_______

[E] COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase
  Nos:  alr2811
  Eco:  avtA
  EcZ:  ZavtA
  Ecs:  ECs4455
  Ype:  YPO4082
  Sty:  STM3665
  Vch:  VC0019
  Nme:  NMB1823
  NmA:  NMA0636
_______

[S] COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit
  Eco:  ilvM
  EcZ:  ZilvM
  Ecs:  ECs4703
  Ype:  YPO3900
  Sty:  STM3902
  Vch:  VC0030
  Pmu:  PM1627
  Xfa:  XF1820
_______

[R] COG3979 Uncharacterized protein contain chitin-binding domain type 3
  Hbs:  VNG0816G_1 VNG0818C_1 VNG0819C
  Lla:  L9964_2
  Lin:  lin0153_2 lin2611_2
  Bha:  BH0916_2 BH1303_2
  Ype:  YPO0308_2
  Sty:  STM0018_2 STM0233
  Vch:  VC0769 VC1952_1 VCA0027_2 VCA0140_2 VCA0700_1
  Pae:  PA2300_2
_______

[M] COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase
  Mja:  MJ1062_1
  Cac:  CAC2186
  Bsu:  BS_spsG
  Hpy:  HP0326_2
  Cje:  Cj1312
  Ccr:  CC2854
_______

[R] COG3981 Predicted acetyltransferase
  Fnu:  FN0104 FN0657
  Dra:  DR0763
  Cac:  CAC0315 CAC2487 CAC2739
  Cgl:  Cgl0523
  Lla:  L3279
  Spy:  SPy2106
  Spn:  SP0204
  Bha:  BH0503
  Vch:  VCA0631
  Pmu:  PM0033
  Mlo:  mll2478
_______

[R] COG4001 Predicted metal-binding protein
  Afu:  AF2009_1
  Mth:  MTH1786
  Mka:  MK0896_1
_______

[R] COG4002 Predicted phosphotransacetylase
  Mac:  MA1806
  Mth:  MTH231
  Mja:  MJ1371
  Mka:  MK0941
_______

[S] COG4003 Uncharacterized protein conserved in archaea
  Afu:  AF1363
  Mka:  MK0962
  Pho:  PH1599
  Pab:  PAB0387
_______

[S] COG4004 Uncharacterized protein conserved in archaea
  Afu:  AF1111
  Mac:  MA4190
  Mka:  MK1058_1
  Tac:  Ta0095
  Tvo:  TVN0158
_______

[S] COG4006 Uncharacterized protein conserved in archaea
  Mka:  MK1293
  Pya:  PAE0126
  Sso:  SSO1393
  Ape:  APE2256
_______

[R] COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase
  Mth:  MTH1512 MTH504
  Mja:  MJ0715 MJ1338
  Mka:  MK1122 MK1365
_______

[K] COG4008 Predicted metal-binding transcription factor
  Mac:  MA0693_2
  Mth:  MTH1014
  Mja:  MJ0115
  Mka:  MK1432
_______

[S] COG4009 Uncharacterized protein conserved in archaea
  Mth:  MTH1880
  Mja:  MJ0858
  Mka:  MK1467
_______

[S] COG4010 Uncharacterized protein conserved in archaea
  Mth:  MTH1881
  Mja:  MJ0856
  Mka:  MK1468
_______

[S] COG4012 Uncharacterized protein conserved in archaea
  Afu:  AF0413
  Mac:  MA0184
  Mth:  MTH1477
  Mka:  MK1497
_______

[S] COG4013 Uncharacterized protein conserved in archaea
  Mth:  MTH1568
  Mja:  MJ0540
  Mka:  MK1531
_______

[S] COG4014 Uncharacterized protein conserved in archaea
  Mac:  MA4518
  Mth:  MTH814
  Mja:  MJ0157
  Mka:  MK1668
_______

[R] COG4015 Predicted dinucleotide-utilizing enzyme of the ThiF/HesA family
  Mth:  MTH1147
  Mja:  MJ0693
  Mka:  MK0010
_______

[S] COG4016 Uncharacterized protein conserved in archaea
  Mth:  MTH1148
  Mja:  MJ1251
  Mka:  MK0012
_______

[S] COG4017 Uncharacterized protein conserved in archaea
  Mth:  MTH1145
  Mja:  MJ0489
  Mka:  MK0014
_______

[S] COG4018 Uncharacterized protein conserved in archaea
  Mth:  MTH1137
  Mja:  MJ0787
  Mka:  MK0017
_______

[S] COG4019 Uncharacterized protein conserved in archaea
  Mth:  MTH1144
  Mja:  MJ0488
  Mka:  MK0018
_______

[S] COG4020 Uncharacterized protein conserved in archaea
  Mac:  MA3856
  Mth:  MTH1441
  Mja:  MJ1370
  Mka:  MK0078
_______

[S] COG4021 Uncharacterized conserved protein
  Mac:  MA0817
  Mth:  MTH972
  Mka:  MK0093
  Sce:  YGR024c
  Spo:  SPCC63.07
_______

[S] COG4022 Uncharacterized protein conserved in archaea
  Mac:  MA0039 MA2220 MA2238
  Mth:  MTH1574
  Mja:  MJ0054
  Mka:  MK0150
_______

[U] COG4023 Preprotein translocase subunit Sec61beta
  Hbs:  VNG2599H
  Mka:  MK0208
  Tac:  Ta1302a
  Tvo:  TVN0319
  Pya:  PAE2389
  Ape:  APES028
_______

[S] COG4024 Uncharacterized protein conserved in archaea
  Mth:  MTH1195
  Mja:  MJ1481
  Mka:  MK0211
_______

[S] COG4025 Predicted membrane protein
  Mth:  MTH423
  Mka:  MK0212
  Pho:  PH1344
  Pab:  PAB2392
_______

[R] COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease
  Mth:  MTH647
  Mka:  MK0222
  Pab:  PAB0254
_______

[S] COG4027 Uncharacterized protein conserved in archaea
  Mka:  MK0245_1
  Pho:  PH1441_1
  Pab:  PAB1895_1
  Ape:  APE2075_1
_______

[R] COG4028 Predicted P-loop ATPase/GTPase
  Mka:  MK0276
  Pho:  PH0727
  Pab:  PAB1503
  Sso:  SSO2257
  Ape:  APE2472
_______

[S] COG4029 Uncharacterized protein conserved in archaea
  Mac:  MA3996
  Mth:  MTH1866
  Mja:  MJ0498
  Mka:  MK0332
_______

[S] COG4030 Uncharacterized protein conserved in archaea
  Afu:  AF1437
  Mth:  MTH402
  Mka:  MK0346
_______

[R] COG4031 Predicted metal-binding protein
  Afu:  AF0485
  Hbs:  VNG0240C
  Mac:  MA3855
  Mka:  MK0353
_______

[R] COG4032 Predicted thiamine-pyrophosphate-binding protein
  Mac:  MA3298_1
  Mth:  MTH1206
  Mja:  MJ0255a
  Mka:  MK0395
_______

[S] COG4033 Uncharacterized protein conserved in archaea
  Mac:  MA0126 MA0129
  Mth:  MTH776
  Mja:  MJ0453
  Mka:  MK0411
_______

[S] COG4034 Uncharacterized protein conserved in archaea
  Afu:  AF0778
  Mka:  MK0445
  Pya:  PAE3641
  Sso:  SSO2371
  Ape:  APE0973
_______

[S] COG4035 Predicted membrane protein
  Mth:  MTH395
  Mja:  MJ0518
  Mka:  MK0466
_______

[S] COG4036 Predicted membrane protein
  Mth:  MTH390
  Mja:  MJ0523
  Mka:  MK0471
_______

[S] COG4037 Predicted membrane protein
  Mth:  MTH389
  Mja:  MJ0524
  Mka:  MK0472
_______

[S] COG4038 Predicted membrane protein
  Mth:  MTH388
  Mja:  MJ0525
  Mka:  MK0473
_______

[S] COG4039 Predicted membrane protein
  Mth:  MTH387
  Mja:  MJ0526
  Mka:  MK0474
_______

[S] COG4040 Predicted membrane protein
  Mth:  MTH386
  Mja:  MJ0526.1
  Mka:  MK0475
_______

[S] COG4041 Predicted membrane protein
  Mth:  MTH385
  Mja:  MJ0527
  Mka:  MK0476
_______

[S] COG4042 Predicted membrane protein
  Mth:  MTH384
  Mja:  MJ0528
  Mka:  MK0477
_______

[S] COG4043 Uncharacterized conserved protein
  Mka:  MK0492_2
  Pho:  PH0355 PH0447
  Pab:  PAB1060 PAB1310
  Bha:  BH0816
_______

[S] COG4044 Uncharacterized protein conserved in archaea
  Hbs:  VNG0758C
  Mac:  MA1457
  Mka:  MK0493
  Pho:  PH0618
  Pab:  PAB0951
_______

[S] COG4046 Uncharacterized protein conserved in archaea
  Mth:  MTH1848
  Mka:  MK0518
  Pya:  PAE1446
  Sso:  SSO0097
  Ape:  APE1123
_______

[S] COG4047 Uncharacterized protein conserved in archaea
  Mka:  MK0541
  Pho:  PH1229
  Pab:  PAB1695
  Pya:  PAE2237
  Ape:  APE0710
_______

[S] COG4048 Uncharacterized protein conserved in archaea
  Mac:  MA4362_1 MA4431
  Mth:  MTH1867
  Mja:  MJ0405
  Mka:  MK0570
_______

[R] COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger
  Mja:  MJ0589a
  Mka:  MK0577
  Pho:  PHS034
  Pab:  PAB0758a
_______

[S] COG4050 Uncharacterized protein conserved in archaea
  Mac:  MA3995
  Mth:  MTH1868
  Mja:  MJ0404
  Mka:  MK0579
_______

[S] COG4051 Uncharacterized protein conserved in archaea
  Mac:  MA3993
  Mth:  MTH1870
  Mja:  MJ0802
  Mka:  MK0581
_______

[R] COG4052 Uncharacterized protein related to methyl coenzyme M reductase subunit C
  Mac:  MA3992
  Mth:  MTH1180
  Mja:  MJ0094
  Mka:  MK0583
_______

[S] COG4053 Uncharacterized protein conserved in archaea
  Mth:  MTH564
  Mja:  MJ1676
  Mka:  MK0634
_______

[H] COG4054 Methyl coenzyme M reductase, beta subunit
  Mac:  MA4550
  Mth:  MTH1132 MTH1168
  Mja:  MJ0081 MJ0842
  Mka:  MK0651
_______

[H] COG4055 Methyl coenzyme M reductase, subunit D
  Mac:  MA4549
  Mth:  MTH1131 MTH1167
  Mja:  MJ0118 MJ0843
  Mka:  MK0652
_______

[H] COG4056 Methyl coenzyme M reductase, subunit C
  Mac:  MA4548
  Mth:  MTH1166
  Mja:  MJ0844
  Mka:  MK0653
_______

[H] COG4057 Methyl coenzyme M reductase, gamma subunit
  Mac:  MA4547
  Mth:  MTH1130 MTH1165
  Mja:  MJ0082 MJ0845
  Mka:  MK0654
_______

[H] COG4058 Methyl coenzyme M reductase, alpha subunit
  Mac:  MA4546
  Mth:  MTH1129 MTH1164
  Mja:  MJ0083 MJ0846
  Mka:  MK0655 MK1487
_______

[H] COG4059 Tetrahydromethanopterin S-methyltransferase, subunit E
  Mac:  MA0276
  Mth:  MTH1163
  Mja:  MJ0847
  Mka:  MK0656
_______

[H] COG4060 Tetrahydromethanopterin S-methyltransferase, subunit D
  Mac:  MA0275
  Mth:  MTH1162
  Mja:  MJ0848
  Mka:  MK0657
_______

[H] COG4061 Tetrahydromethanopterin S-methyltransferase, subunit C
  Mac:  MA0274
  Mth:  MTH1161
  Mja:  MJ0849
  Mka:  MK0658
_______

[H] COG4062 Tetrahydromethanopterin S-methyltransferase, subunit B
  Mac:  MA0273
  Mth:  MTH1160
  Mja:  MJ0850
  Mka:  MK0659
_______

[H] COG4063 Tetrahydromethanopterin S-methyltransferase, subunit A
  Mac:  MA0272 MA1805
  Mth:  MTH1062 MTH1159
  Mja:  MJ0851
  Mka:  MK0660
_______

[H] COG4064 Tetrahydromethanopterin S-methyltransferase, subunit G
  Mac:  MA0270
  Mth:  MTH1157
  Mja:  MJ0853
  Mka:  MK0661
_______

[S] COG4065 Uncharacterized protein conserved in archaea
  Mac:  MA4519
  Mth:  MTH1153
  Mja:  MJ1451
  Mka:  MK0665
_______

[S] COG4066 Uncharacterized protein conserved in archaea
  Mth:  MTH811 MTH812
  Mja:  MJ0646
  Mka:  MK0666
_______

[O] COG4067 Uncharacterized protein conserved in archaea
  Mka:  MK0745_1
  Vch:  VC1162 VC2280 VCA0514
  Pae:  PA0457 PA0462 PA1768 PA5196
_______

[S] COG4068 Uncharacterized protein containing a Zn-ribbon
  Afu:  AF0872
  Mth:  MTH880
  Mka:  MK0761
_______

[S] COG4069 Uncharacterized protein conserved in archaea
  Mac:  MA1307 MA1397 MA1743
  Mth:  MTH1863
  Mja:  MJ0065
  Mka:  MK0794
_______

[O] COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family
  Mac:  MA3997
  Mth:  MTH1865
  Mja:  MJ1412
  Mka:  MK0796
_______

[S] COG4071 Uncharacterized protein conserved in archaea
  Mth:  MTH1670
  Mja:  MJ1361
  Mka:  MK0838
_______

[S] COG4072 Uncharacterized protein conserved in archaea
  Mja:  MJ0859
  Mka:  MK0773
  Pho:  PH1273
  Pab:  PAB1584
_______

[S] COG4073 Uncharacterized protein conserved in archaea
  Mac:  MA2005
  Mth:  MTH1635
  Mja:  MJ0501
  Mka:  MK1393
_______

[C] COG4074 H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase
  Mth:  MTH1142
  Mja:  MJ0784
  Mka:  MK0013
_______

[S] COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII
  Mth:  MTH1110
  Mja:  MJ1244 MJ1245
  Mka:  MK1106
_______

[R] COG4076 Predicted RNA methylase
  Mth:  MTH738
  Mja:  MJ1452
  Mka:  MK0762
_______

[S] COG4077 Uncharacterized protein conserved in archaea
  Mth:  MTH1197
  Mja:  MJ0491
  Mka:  MK0484
_______

[S] COG4078 Predicted membrane protein
  Mth:  MTH391
  Mja:  MJ0522
  Mka:  MK0470
_______

[S] COG4079 Uncharacterized protein conserved in archaea
  Mac:  MA2311
  Mth:  MTH752
  Mja:  MJ0548
  Mka:  MK0285
_______

[L] COG4080 RecB-family nuclease
  Mja:  MJ1199
  Mka:  MK0600 MK1661
  Pya:  PAE3113
  Sso:  SSO0264
  Ape:  APE2001
_______

[S] COG4081 Uncharacterized protein conserved in archaea
  Mac:  MA0128
  Mth:  MTH777
  Mja:  MJ0452
  Mka:  MK0410
_______

[S] COG4083 Predicted membrane protein
  Afu:  AF2046
  Hbs:  VNG2669G
  Mac:  MA0114
  Mka:  MK0423
_______

[S] COG4084 Uncharacterized protein conserved in archaea
  Mth:  MTH396
  Mja:  MJ0517
  Mka:  MK0465
_______

[R] COG4085 Predicted RNA-binding protein, contains TRAM domain
  Mth:  MTH1581
  Mja:  MJ0818
  Mka:  MK0856
  Bsu:  BS_yhcR_1
  Bha:  BH1015_2
_______

[S] COG4086 Predicted secreted protein
  Mth:  MTH1038
  Mka:  MK1417
  Cac:  CAC2758
  Spn:  SP1027
  Bsu:  BS_ypuA
  Bha:  BH1404
_______

[R] COG4087 Soluble P-type ATPase
  Mac:  MA3999
  Mth:  MTH1493
  Mja:  MJ0072 MJ0073 MJ0968
  Mka:  MK0529
_______

[F] COG4088 Predicted nucleotide kinase
  Mja:  MJ1538
  Mka:  MK1679
  Sce:  YKL110c
  Spo:  SPAC30.02c
_______

[S] COG4089 Predicted membrane protein
  Afu:  AF0360
  Mac:  MA0654
  Mka:  MK1425
  Pya:  PAE2020
  Sso:  SSO0055
_______

[S] COG4090 Uncharacterized protein conserved in archaea
  Mac:  MA1711
  Mth:  MTH862
  Mja:  MJ1183
  Mka:  MK0636
_______

[E] COG4091 Predicted homoserine dehydrogenase
  Lin:  lin0550
  Bha:  BH0774
  Nos:  alr2831
  Atu:  AGl3299
  Bme:  BMEII0326
  Mlo:  mll3630 mlr6497
_______

[M] COG4092 Predicted glycosyltransferase involved in capsule biosynthesis
  NmA:  NMA0202
  Cje:  Cj1442c_1
  Sme:  SMb20824_1
_______

[S] COG4093 Uncharacterized protein conserved in bacteria
  Atu:  AGl2431
  Sme:  SMc00712
  Bme:  BMEI0078
  Mlo:  mlr3533
  Ccr:  CC2221
_______

[S] COG4094 Predicted membrane protein
  Syn:  slr1599
  Nos:  alr3954
  Atu:  AGc4185 AGl945
  Sme:  SMa1283 SMb20997
  Ccr:  CC0706
_______

[S] COG4095 Uncharacterized conserved protein
  Mja:  MJ0110
  Spn:  SP0304
  Nos:  asl0795
  Rco:  RC1029
  Uur:  UU041 UU042
  Mpu:  MYPU_0120
_______

[V] COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
  Mac:  MA2106 MA2122 MA2418
  Spn:  SP0510 SP0892
  Nos:  alr3473 alr3618
  Eco:  hsdR
  EcZ:  Z5948
  Ecs:  ECs5308
  Sty:  STM4526
  Rso:  RSc3394
_______

[P] COG4097 Predicted ferric reductase
  Cac:  CAP0043
  Spn:  SP0606
  Nos:  all2633
  Vch:  VCA0151
  Pae:  PA0545
_______

[L] COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
  Lla:  L0318
  Spy:  SPy1616
  Spn:  SP2208
  Sau:  SA0705
  Lin:  lin2657
  Bsu:  BS_comFA
  Bha:  BH3626
_______

[R] COG4099 Predicted peptidase
  Tma:  TM0033
  Ype:  YPO0986
  Pmu:  PM1358
  Sme:  SMb20552
_______

[P] COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
  Cac:  CAC1833
  Sau:  SA1148
  Lin:  lin1335
  Bsu:  BS_ynbB
  Bha:  BH2361
  Syn:  slr0580
  Nos:  alr1600
_______

[G] COG4101 Predicted mannose-6-phosphate isomerase
  Xfa:  XF2088
  Rso:  RSc0220
  Sme:  SMc01822
  Mlo:  mlr1626
_______

[S] COG4102 Uncharacterized protein conserved in bacteria
  Rso:  RSc1651
  Atu:  AGl3459
  Mlo:  mll5452
  Ccr:  CC1979 CC2414
_______

[S] COG4103 Uncharacterized protein conserved in bacteria
  Vch:  VC1379
  Atu:  AGc4817
  Sme:  SMc03235
  Bme:  BMEI0180 BMEI0699
  Mlo:  mll1192 mll4217
_______

[S] COG4104 Uncharacterized conserved protein
  Mac:  MA2070
  Nos:  all3319
  Ype:  YPO0866
  Vch:  VCA0105 VCA0284
  Pae:  PA0824 PA1508 PA3904
  Rso:  RSc0961 RSc3217 RSp0204 RSp0515 RSp0765
  Atu:  AGl1028
  Mlo:  msr6560
_______

[R] COG4105 DNA uptake lipoprotein
  Aae:  aq_1273
  Eco:  yfiO
  EcZ:  Z3889
  Ecs:  ECs3458
  Ype:  YPO3278
  Sty:  STM2663
  Buc:  BU402
  Vch:  VC0708
  Pae:  PA4545
  Hin:  HI0177
  Pmu:  PM1720
  Xfa:  XF0938
  Nme:  NMB0703
  NmA:  NMA0907
  Rso:  RSc1627
  Hpy:  HP1378
  jHp:  jhp1292
  Cje:  Cj1074c
  Atu:  AGc3779
  Sme:  SMc01876
  Bme:  BMEI0587
  Mlo:  mll1543
  Ccr:  CC1984
  Rpr:  RP183
  Rco:  RC0230
_______

[R] COG4106 Trans-aconitate methyltransferase
  Dra:  DR0422
  Mtu:  Rv0294
  MtC:  MT0307
  Eco:  tam
  EcZ:  Z2186
  Ecs:  ECs2126
  Ype:  YPO2509
  Pae:  PA2564
  Atu:  AGc1589
  Sme:  SMc00225
  Bme:  BMEI0554
  Mlo:  mll1606
_______

[P] COG4107 ABC-type phosphonate transport system, ATPase component
  Nos:  all2218
  Eco:  phnK
  EcZ:  ZphnK
  Ecs:  ECs5080
  Ype:  YPO3461
  Pae:  PA3376
  Atu:  AGc295
  Sme:  SMb20763
  Mlo:  mll9151 mlr3347 mlr9283
_______

[J] COG4108 Peptide chain release factor RF-3
  Dra:  DR1553
  Cac:  CAC0630
  Cgl:  Cgl0905
  Lla:  L0369
  Spy:  SPy1416
  Spn:  SP0439
  Sau:  SA0877
  Lin:  lin0987
  Syn:  slr1228
  Nos:  all4379
  Eco:  prfC
  EcZ:  ZprfC
  Ecs:  ECs5333
  Ype:  YPO0430
  Sty:  STM4560
  Buc:  BU543
  Vch:  VC0659
  Pae:  PA3903
  Hin:  HI1735
  Pmu:  PM0816
  Xfa:  XF0174
  Nme:  NMB0626
  NmA:  NMA0836
  Rso:  RSp1662
  Atu:  AGc549
  Sme:  SMc00427
  Bme:  BMEII0236
  Mlo:  mlr5356
  Ccr:  CC1070
_______

[K] COG4109 Predicted transcriptional regulator containing CBS domains
  Cac:  CAC0514
  Lla:  L140288
  Spy:  SPy1355
  Spn:  SP1083
  Sau:  SA1527
  Lin:  lin1611
  Bsu:  BS_ytoI
  Bha:  BH3175
_______

[R] COG4110 Uncharacterized protein involved in stress response
  Dra:  DR2223_2
  Cac:  CAC1413
  EcZ:  ZterA.2_2 ZterA_2
  Ecs:  ECs1352_2
  Ype:  YPO0295_2
_______

[R] COG4111 Uncharacterized conserved protein
  Nme:  NMB0395
  NmA:  NMA2089
  Atu:  AGl1509
  Sme:  SMc02565
  Mlo:  mll5836 mll9106
  Ccr:  CC1450
_______

[R] COG4112 Predicted phosphoesterase (MutT family)
  Tma:  TM1382
  Sau:  SA1501
  Bsu:  BS_ymaB
_______

[R] COG4113 Predicted nucleic acid-binding protein, contains PIN domain
  Pho:  PH0098 PH0389
  Pya:  PAE0151 PAE0285 PAE0337 PAE2754
  Sso:  SSO0798 SSO1243 SSO1493 SSO1786 SSO1914 SSO1922 SSO1970
  Mtu:  Rv0065 Rv0549c Rv0960 Rv1720c
  MtC:  MT0071 MT0574 MT0988 MT1761
  Syn:  sll1225
  Nos:  all5132
  Sme:  SMa0545
_______

[R] COG4114 Uncharacterized Fe-S protein
  Bha:  BH1040
  Eco:  fhuF
  EcZ:  ZfhuF
  Ecs:  ECs5327
  Ype:  YPO1528
  Sty:  STM4550
  Sme:  SMc01658
_______

[S] COG4115 Uncharacterized protein conserved in bacteria
  Mtu:  Rv3358
  MtC:  MT3466
  Spn:  SP1740
  Sau:  SA2195 SA2245
  Nos:  asl0171
  Atu:  AGc3658
  Rco:  RC0291
_______

[S] COG4116 Uncharacterized protein conserved in bacteria
  Lla:  L164461
  Spy:  SPy1124
  Spn:  SP1096
  Sau:  SA0862
  Lin:  lin0964
  Bsu:  BS_yjbK
  Bha:  BH2851
_______

[C] COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
  Nos:  alr2943
  Eco:  ydhU
  EcZ:  ZydhU
  Ecs:  ECs2377
  Sty:  STM2063
  Pae:  PA4883
  Rso:  RSc0619
  Bme:  BMEII0074
  Mlo:  mlr0877
_______

[D] COG4118 Antitoxin of toxin-antitoxin stability system
  Mtu:  Rv0596c Rv0626 Rv2830c Rv3181c Rv3385c Rv3407
  MtC:  MT0626 MT0654 MT0692.1 MT2013 MT2941 MT3272 MT3493
        MT3515
  Syn:  ssl1004
  Nos:  asl4136 asr3468
  Nme:  NMB1666
  Sme:  SMc00392 SMc01748 SMc03136
  Rco:  RC0676 RC1013
_______

[LR] COG4119 Predicted NTP pyrophosphohydrolase
  Mtu:  Rv3733c
  MtC:  MT3838
  Sme:  SMb20988
  Mlo:  mlr1881
_______

[R] COG4120 ABC-type uncharacterized transport system, permease component
  Fnu:  FN2080
  Cgl:  Cgl2197
  Spy:  SPy1018
  Spn:  SP1070
  Vch:  VC1102
  Pae:  PA3837
  Rso:  RSc1739
  Atu:  AGc4842
  Sme:  SMc03829
  Bme:  BMEI0013
  Mlo:  mll0622
  Rpr:  RP368
  Rco:  RC0499
_______

[S] COG4121 Uncharacterized conserved protein
  Mth:  MTH175
  Mja:  MJ0670
  Aae:  aq_1980
  Dra:  DR1672
  Syn:  sll0983
  Nos:  alr3919
  Eco:  yfcK_1
  EcZ:  Z3587_1
  Ecs:  ECs3208_1
  Ype:  YPO2756_1
  Sty:  STM2379_1
  Vch:  VC2110_1
  Pae:  PA3456_1
  Hin:  HI1534 HI1535_1
  Pmu:  PM0338_1
  Rso:  RSc1709_1
  Cje:  Cj1268c_1
  Atu:  AGc4236
  Sme:  SMb20878
  Ccr:  CC0748_1
  Bbu:  BB0740
_______

[R] COG4122 Predicted O-methyltransferase
  Hbs:  VNG0713C
  Mac:  MA0707
  Ape:  APE1723
  Spo:  SPBC119.03
  Aae:  aq_1507
  Fnu:  FN0314
  Dra:  DR0603_3
  Cac:  CAC1686
  Cgl:  Cgl0177 Cgl1095
  Mtu:  Rv0187 Rv1220c Rv1703c
  MtC:  MT0197 MT1258 MT1743
  Mle:  ML1075
  Lla:  L165684
  Spy:  SPy1391
  Spn:  SP0980
  Sau:  SA1442
  Lin:  lin1533
  Bsu:  BS_yrrM
  Bha:  BH1272 BH1828
  Syn:  slr0095
  Nos:  all5179
  Pae:  PA1200 PA1402
  Nme:  NMB1441
  NmA:  NMA1653
  Mlo:  mll5689 mlr0279
_______

[R] COG4123 Predicted O-methyltransferase
  Aae:  aq_674
  Tma:  TM0691
  Fnu:  FN0782 FN0907
  Cac:  CAC0306
  Lla:  L193121
  Spy:  SPy1411
  Spn:  SP1536
  Sau:  SA0445
  Lin:  lin0208
  Bsu:  BS_yabB
  Bha:  BH0047
  Eco:  yfiC
  EcZ:  ZyfiC
  Ecs:  ECs3441
  Ype:  YPO2709
  Sty:  STM2642
  Vch:  VC0661
  Hin:  HI0423
  Pmu:  PM1839
  Hpy:  HP1504
  jHp:  jhp1397
  Cje:  Cj0495
  Atu:  AGc1128
  Sme:  SMc00858
  Bme:  BMEI1534
  Mlo:  mll7427
  Ccr:  CC2114
  Uur:  UU305
  Mpu:  MYPU_4720
_______

[G] COG4124 Beta-mannanase
  Cac:  CAC0332 CAC0538_1 CAC0539_1 CAC0540_1 CAC2556
  Bsu:  BS_ydhT
  Atu:  AGl3016
  Sme:  SMb20462
  Bme:  BMEII0724
  Mlo:  mll7872
_______

[S] COG4125 Predicted membrane protein
  Ype:  YPO2978
  Sty:  STM3021
  Pae:  PA2757 PA2880
  Rso:  RSp1513
  Atu:  AGc3030
  Sme:  SMa1780
_______

[E] COG4126 Hydantoin racemase
  Pho:  PH1054
  Sce:  YIR030c
  Spo:  SPAC1F7.10 SPCC576.02
  Atu:  AGl3449 AGl353
  Sme:  SMa1652 SMc02427 SMc04361
  Mlo:  mll8441
_______

[S] COG4127 Uncharacterized conserved protein
  Mac:  MA1955
  Cac:  CAC2412
  Sty:  STM4490
  Ccr:  CC0622
_______

[R] COG4128 Zonula occludens toxin
  Ype:  YPO2279
  Vch:  VC1458
  Pae:  PA0726
_______

[S] COG4129 Predicted membrane protein
  Cac:  CAC2484 CAC3439
  Cgl:  Cgl2711
  Mtu:  Rv2571c
  MtC:  MT2647
  Spy:  SPy1253 SPy1879
  Spn:  SP0500 SP1754
  Sau:  SA1344 SA1682 SA1705
  Lin:  lin1794 lin1983
  Bsu:  BS_ygaE BS_yqjA
  Bha:  BH0942 BH1464 BH2644
  Atu:  AGc2137
  Bme:  BMEI1556
_______

[G] COG4130 Predicted sugar epimerase
  Sty:  STM4435
  Rso:  RSc1245
  Atu:  AGl627
  Sme:  SMb20711
  Mlo:  mlr6178
_______

[R] COG4132 ABC-type uncharacterized transport system, permease component
  Pae:  PA3252
  Cje:  Cj0730
  Atu:  AGc3892
  Sme:  SMc01606
  Bme:  BMEII1121
  Mlo:  mll3068
_______

[O] COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component
  Eco:  ccmA
  EcZ:  ZccmA
  Ecs:  ECs3090
  Ype:  YPO2734
  Sty:  STM2254 STM3819
  Vch:  VC2057
  Pae:  PA1475
  Hin:  HI1089
  Pmu:  PM0005
  Xfa:  XF2455
  Atu:  AGc4868
  Sme:  SMc03847
  Bme:  BMEI1853
  Mlo:  mll4333
  Ccr:  CC3668
  Rpr:  RP794
  Rco:  RC1228
_______

[R] COG4134 ABC-type uncharacterized transport system, periplasmic component
  Eco:  ynjB
  EcZ:  Z2786
  Ecs:  ECs2460
  Ype:  YPO2029
  Vch:  VC1664
  Atu:  AGl608
  Sme:  SMc02589
  Bme:  BMEII0479
_______

[R] COG4135 ABC-type uncharacterized transport system, permease component
  Eco:  ynjC
  EcZ:  Z2787
  Ecs:  ECs2461
  Vch:  VC1665
  Sme:  SMc02588
_______

[R] COG4136 ABC-type uncharacterized transport system, ATPase component
  Eco:  ynjD
  EcZ:  Z2788
  Ecs:  ECs2462
  Vch:  VC1666
  Sme:  SMc02587
_______

[R] COG4137 ABC-type uncharacterized transport system, permease component
  Eco:  ypjD
  EcZ:  Z3905
  Ecs:  ECs3474
  Ype:  YPO3297
  Sty:  STM2678
  Vch:  VC0559
  Pae:  PA3747
  Pmu:  PM1184
  Xfa:  XF0072 XF0171
  Nme:  NMB0296
  NmA:  NMA2189
  Rso:  RSc2810
_______

[H] COG4138 ABC-type cobalamin transport system, ATPase component
  Eco:  btuD
  EcZ:  ZbtuD
  Ecs:  ECs2416
  Ype:  YPO2423
  Sty:  STM1342
  Vch:  VC1245
_______

[H] COG4139 ABC-type cobalamin transport system, permease component
  Eco:  btuC
  EcZ:  ZbtuC
  Ecs:  ECs2418
  Ype:  YPO2425
  Sty:  STM1340
  Vch:  VC1244
_______

[H] COG4143 ABC-type thiamine transport system, periplasmic component
  Hbs:  VNG1879G VNG2395C
  Pho:  PH1349
  Pab:  PAB1835
  Pya:  PAE0331
  Dra:  DR0262
  Eco:  tbpA
  EcZ:  ZtbpA
  Ecs:  ECs0072
  Ype:  YPO0522
  Sty:  STM0108
  Vch:  VC2539
  Hin:  HI1019
  Pmu:  PM0376
  Nme:  NMB0041
  NmA:  NMA0287
  Atu:  AGc4919
  Sme:  SMc03869
  Bme:  BMEI0285
  Mlo:  mll3867
  Tpa:  TP0144
_______

[H] COG4145 Na+/panthothenate symporter
  Afu:  AF1069
  Fnu:  FN0685
  Eco:  panF
  EcZ:  ZpanF
  Ecs:  ECs4130
  Ype:  YPO3657
  Sty:  STM3382
  Hin:  HI0975
  Pmu:  PM1089
  Bbu:  BB0814
_______

[R] COG4146 Predicted symporter
  Bha:  BH2222
  Eco:  yidK
  EcZ:  ZyidK
  Ecs:  ECs4620
  Hin:  HI1315
  Pmu:  PM0597
_______

[R] COG4147 Predicted symporter
  Afu:  AF0969
  Aae:  aq_2106
  Dra:  DR0477
  Cgl:  Cgl0810
  Bsu:  BS_ywcA
  Bha:  BH3743
  Nos:  all1678
  Eco:  yjcG
  EcZ:  ZyjcG
  Ecs:  ECs5049
  Ype:  YPO0251
  Sty:  STM4273
  Vch:  VC2705
  Pae:  PA3234
  Xfa:  XF2251
  Rso:  RSc1951
_______

[P] COG4148 ABC-type molybdate transport system, ATPase component
  Sau:  SA2072
  Eco:  modC
  EcZ:  ZmodC
  Ecs:  ECs0793
  Ype:  YPO1147
  Sty:  STM0783
  Vch:  VCA0724
  Pae:  PA1861
  Hin:  HI1691
  Pmu:  PM0742
  Atu:  AGc4645
  Sme:  SMc03198
  Bme:  BMEII0003
  Mlo:  mll1463
_______

[P] COG4149 ABC-type molybdate transport system, permease component
  Mac:  MA1236 MA2281 MA3902
  Ape:  APE0270
  Aae:  aq_086
  Cgl:  Cgl0214
  Mtu:  Rv1858
  MtC:  MT1906
  Sau:  SA2073
  Lin:  lin1032
  Bsu:  BS_yvgM
  Bha:  BH3328
  Syn:  sll0739_1
  Nos:  alr2433_1
  Eco:  modB
  EcZ:  ZmodB
  Ecs:  ECs0792
  Ype:  YPO1146
  Sty:  STM0782
  Vch:  VCA0725
  Pae:  PA1862
  Hin:  HI1692
  Pmu:  PM0743
  Rso:  RSp1144
  Hpy:  HP0474
  jHp:  jhp0426
  Cje:  Cj0301c
  Atu:  AGc4643
  Sme:  SMc03197
  Bme:  BMEII0004
  Mlo:  mll1464
  Ccr:  CC0329
_______

[P] COG4150 ABC-type sulfate transport system, periplasmic component
  Eco:  cysP
  EcZ:  ZcysP
  Ecs:  ECs3296
  Ype:  YPO3015
  Sty:  STM2444
  Vch:  VC0538
  Atu:  AGl2651
  Bme:  BMEI0673
  Mlo:  mlr1672
_______

[R] COG4152 ABC-type uncharacterized transport system, ATPase component
  Mac:  MA4366
  Mja:  MJ1023
  Lla:  L18206
  Spn:  SP1717
  Sau:  SA2132
  Lin:  lin2244
  Bsu:  BS_yhaQ
  Bha:  BH1166
  Ccr:  CC3299
_______

[G] COG4154 Fucose dissimilation pathway protein FucU
  Spn:  SP2165
  Eco:  fucU
  EcZ:  ZfucU
  Ecs:  ECs3664
  Sty:  STM2978
  Hin:  HI0612
  Atu:  AGc3656
  Sme:  SMb21302 SMc02173
  Bme:  BMEI0667
  Mlo:  mll7581 mlr8491
_______

[R] COG4158 Predicted ABC-type sugar transport system, permease component
  EcZ:  Z5690
  Ecs:  ECs5072
  Ype:  YPO3963
  Pmu:  PM1378
  Mlo:  mll3405 mll3597
_______

[E] COG4160 ABC-type arginine/histidine transport system, permease component
  Eco:  artM hisM
  EcZ:  ZartM ZhisM
  Ecs:  ECs0944 ECs3191
  Ype:  YPO1349 YPO2776
  Sty:  STM0888 STM2352
  Vch:  VC1861 VCA0757
  Pae:  PA0890 PA2925 PA5155
  Hin:  HI1177
  Pmu:  PM0126
  Atu:  AGc3451 AGc4292 AGpT65
  Sme:  SMa0492 SMc00138 SMc02257
  Mlo:  mll5199 mll6985 mlr0551
_______

[E] COG4161 ABC-type arginine transport system, ATPase component
  Eco:  artP
  EcZ:  ZartP
  Ecs:  ECs0947
  Ype:  YPO1352
  Sty:  STM0891
  Vch:  VCA0760
  Hin:  HI1180
  Pmu:  PM0123
_______

[E] COG4166 ABC-type oligopeptide transport system, periplasmic component
  Tma:  TM1746
  Fnu:  FN1313
  Cac:  CAC2667 CAC3632 CAC3634
  Cgl:  Cgl1944 Cgl2326
  Mtu:  Rv3666c
  MtC:  MT3767
  Lla:  L124415 L143312 L145267
  Spn:  SP0366 SP1527 SP1891
  Sau:  SA0849
  Lin:  lin0190 lin0200 lin2300 lin2714
  Bsu:  BS_dppE BS_oppA
  Eco:  mppA oppA sapA yejA ygiS
  EcZ:  Z2438 Z4374 ZoppA ZsapA ZyejA
  Ecs:  ECs1743 ECs1871 ECs1911 ECs3069 ECs3904
  Ype:  YPO1273 YPO2182 YPO2339 YPO2355
  Sty:  STM1679 STM1692 STM1746 STM2216
  Vch:  VC1091 VC1680 VCA0591
  Pae:  PA1810 PA1811 PA2058
  Hin:  HI0213 HI1124 HI1638
  Pmu:  PM0678 PM0911 PM1910
  Rso:  RSc1173
  Hpy:  HP1252
  jHp:  jhp1173
  Atu:  AGc316 AGc3261 AGl1204
  Sme:  SMb21196 SMc00951 SMc02832
  Bme:  BMEI1934 BMEI1935 BMEII0691 BMEII0734 BMEII0735
  Mlo:  mll5493 mll5494 mlr0514 mlr7597
  Ctr:  CT175 CT198
  Cpn:  CPn0195 CPn0196 CPn0198
  Tpa:  TP0585
  Bbu:  BB0328 BB0329 BB0330 BBA34 BBB16
  Uur:  UU557_1
  Mpu:  MYPU_4150_1
_______

[V] COG4167 ABC-type antimicrobial peptide transport system, ATPase component
  Eco:  sapF
  EcZ:  ZsapF
  Ecs:  ECs1867
  Ype:  YPO2359
  Sty:  STM1696
  Vch:  VC1684
  Hin:  HI1642
  Pmu:  PM0915
_______

[V] COG4168 ABC-type antimicrobial peptide transport system, permease component
  Eco:  sapB
  EcZ:  ZsapB
  Ecs:  ECs1870
  Ype:  YPO2356
  Sty:  STM1693
  Vch:  VC1681
  Hin:  HI1639
  Pmu:  PM0912
_______

[V] COG4170 ABC-type antimicrobial peptide transport system, ATPase component
  Eco:  sapD
  EcZ:  ZsapD
  Ecs:  ECs1868
  Ype:  YPO2358
  Sty:  STM1695
  Vch:  VC1683
  Hin:  HI1641
  Pmu:  PM0914
_______

[V] COG4171 ABC-type antimicrobial peptide transport system, permease component
  Eco:  sapC
  EcZ:  ZsapC
  Ecs:  ECs1869
  Ype:  YPO2357
  Sty:  STM1694
  Vch:  VC1682
  Hin:  HI1640
  Pmu:  PM0913
_______

[R] COG4172 ABC-type uncharacterized transport system, duplicated ATPase component
  Fnu:  FN1362
  Eco:  yejF
  EcZ:  ZyejF
  Ecs:  ECs3072
  Ype:  YPO1270
  Sty:  STM2219
  Vch:  VCA0588 VCA0977
  Pae:  PA1807 PA2061
  Rso:  RSc1176
  Atu:  AGc320 AGl1210 AGl438
  Sme:  SMb21199 SMb21644 SMc02829
  Bme:  BMEI1938 BMEII0738
  Mlo:  mll5490 mlr1190 mlr6448 mlr7600
_______

[R] COG4174 ABC-type uncharacterized transport system, permease component
  Eco:  yejB
  EcZ:  ZyejB
  Ecs:  ECs3070
  Ype:  YPO1272
  Sty:  STM2217
  Vch:  VCA0590
  Pae:  PA1809 PA2059
  Rso:  RSc1174
  Hpy:  HP1251
  jHp:  jhp1172
  Atu:  AGc318
  Sme:  SMc02831
  Bme:  BMEI1936
  Mlo:  mll5491
_______

[E] COG4175 ABC-type proline/glycine betaine transport system, ATPase component
  Mac:  MA2145
  Lla:  L74195
  Spy:  SPy0183
  Lin:  lin1013
  Bsu:  BS_opuAA
  Eco:  proV
  EcZ:  ZproV
  Ecs:  ECs3540
  Ype:  YPO2647
  Sty:  STM2809
  Pae:  PA5094 PA5376
  Rso:  RSp0066
  Atu:  AGc1628 AGc4141 AGl1401GM AGl1620 AGl1796 AGpA303
  Sme:  SMc00670 SMc02739 SMc04439
  Bme:  BMEI0439 BMEII0548
  Mlo:  mll2742 mll7330
  Bbu:  BB0146
_______

[E] COG4176 ABC-type proline/glycine betaine transport system, permease component
  Mac:  MA2146
  Lla:  L72477_1
  Spy:  SPy0184_1
  Lin:  lin1014
  Bsu:  BS_opuAB
  Eco:  proW
  EcZ:  ZproW
  Ecs:  ECs3541
  Ype:  YPO2646
  Sty:  STM2810
  Pae:  PA5095 PA5377
  Rso:  RSp0067
  Atu:  AGc1629 AGc4143 AGl1619 AGl1798 AGl1799 AGl2064 AGpA304
  Sme:  SMc00671 SMc02379 SMc02738
  Bme:  BMEI0440 BMEII0549
  Mlo:  mll2744 mll7329
  Bbu:  BB0145
_______

[E] COG4177 ABC-type branched-chain amino acid transport system, permease component
  Afu:  AF0225 AF0824 AF0960 AF1393
  Mja:  MJ1270
  Pya:  PAE1390 PAE2084 PAE3348
  Sso:  SSO2841
  Ape:  APE0924 APE1304 APE2523
  Tma:  TM1137
  Fnu:  FN1430
  Dra:  DR0282 DR1036 DR2120 DRA0261_1 DRA0322
  Cgl:  Cgl0908
  Spn:  SP0751
  Bha:  BH0249
  Syn:  sll0146 slr1201 ssl3127
  Nos:  all1047 all1949 alr2538
  Eco:  livM
  EcZ:  ZlivM
  Ecs:  ECs4303
  Ype:  YPO1189 YPO3806
  Sty:  STM3562
  Pae:  PA1072 PA4860 PA4911
  Rso:  RSc1752 RSc2039 RSc2247 RSc2439 RSc3340 RSp0015 RSp0706_1
  Cje:  Cj1016c
  Atu:  AGc2606_1 AGc4378 AGc4400 AGl1453 AGl706 AGpA778 AGpA795
  Sme:  SMb20603 SMb20786 SMc01950 SMc02360 SMc03117
  Bme:  BMEI0259 BMEII0067 BMEII0101 BMEII0120_1 BMEII0340 BMEII0630 BMEII0631
        BMEII0874_2
  Mlo:  mll0759 mll3976 mll4887 mll7174 mll7200 mlr5222 mlr9036
_______

[R] COG4178 ABC-type uncharacterized transport system, permease and ATPase components
  Sce:  YKL188c YPL147w
  Mtu:  Rv1819c
  MtC:  MT1867
  Mle:  ML2084
  Syn:  sll0182
  Nos:  all2650 alr2663
  Eco:  yddA
  EcZ:  ZyddA
  Ecs:  ECs2101
  Hin:  HI0036 HI1467
  Pmu:  PM0041 PM1072
  Nme:  NMB1077
  Rso:  RSc0456
  Atu:  AGl1966 AGl3495
  Sme:  SMb20937
  Bme:  BMEI0520 BMEII0976
  Mlo:  mll3543 mll4764 mlr0519
_______

[Q] COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
  Eco:  ybbA
  EcZ:  ZybbA
  Ecs:  ECs0557
  Ype:  YPO3079
  Sty:  STM0507
  Vch:  VCA0782
  Pae:  PA2857
  Rso:  RSc1718
  Atu:  AGc4858
  Sme:  SMc03837
  Mlo:  mll4346
  Ccr:  CC1759
_______

[S] COG4185 Uncharacterized protein conserved in bacteria
  Cac:  CAC1491
  Mtu:  Rv0366c
  MtC:  MT0382
  Nos:  alr5363
  Hin:  HI1395
  Atu:  AGpT211
_______

[R] COG4186 Predicted phosphoesterase or phosphohydrolase
  Mja:  MJ1445
  Aae:  aq_1666
  Cgl:  Cgl2281
  Sme:  SMb20398
_______

[E] COG4187 Arginine degradation protein (predicted deacylase)
  Dra:  DR0612
  Cac:  CAC0367
  Bsu:  BS_rocB BS_yqjN
  Sme:  SMb20697
_______

[R] COG4188 Predicted dienelactone hydrolase
  Bha:  BH0727
  Syn:  slr1506_2 slr1944_2
  Nos:  all0969_2 all2050_2
  Pae:  PA1907
  Rso:  RSp1248
  Atu:  AGc423 AGc4418 AGpA397
  Ccr:  CC3039
_______

[K] COG4189 Predicted transcriptional regulator
  Bha:  BH1869
  Atu:  AGl3407
  Sme:  SMb21601
  Mlo:  mll3592
_______

[K] COG4190 Predicted transcriptional regulator
  Hbs:  VNG0040C VNG6001H VNG7001
  Pae:  PA2736
  Sme:  SMa2167 SMc01416
_______

[T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system
  Vch:  VC1925 VCA0141
  Pae:  PA1336 PA5165 PA5512
  Rso:  RSc2432_1 RSc0331 RSp0008
  Atu:  AGc174 AGl3043
  Sme:  SMb20612 SMb21201
  Mlo:  mlr5841 mlr7238
_______

[T] COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system
  Sty:  STM2397
  Vch:  VCA0705
  Pmu:  PM1459
_______

[G] COG4193 Beta- N-acetylglucosaminidase
  Cac:  CAC2325_2
  Spn:  SP0965_2
  Sau:  SA0905_3 SA1593 SA2100
  Bsu:  BS_lytD_2
_______

[R] COG4194 Predicted membrane protein
  Tac:  Ta0735
  Sso:  SSO1590
  Cac:  CAC0600
  Cgl:  Cgl0896 Cgl2498
  Lin:  lin0910
_______

[R] COG4195 Phage-related replication protein
  Mtu:  Rv0923c_2
  MtC:  MT0950_2
  Bsu:  BS_yjqB BS_ymaC BS_yndL BS_yoqZ
  Mlo:  mlr6307
_______

[S] COG4196 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2566_2
  MtC:  MT2642_2
  Mle:  ML2678_2
  Atu:  AGl1961_2
  Mlo:  mll2877_2
_______

[S] COG4197 Uncharacterized protein conserved in bacteria, prophage-related
  Eco:  ydaS
  EcZ:  Z1771 Z6072
  Ecs:  ECs1507 ECs2278
  Xfa:  XF0501 XF2126
  Atu:  AGc785
_______

[S] COG4198 Uncharacterized conserved protein
  Tac:  Ta0892
  Tvo:  TVN0970
  Tma:  TM1510
  Cac:  CAC0016
  Lin:  lin2955
_______

[S] COG4199 Uncharacterized protein conserved in bacteria
  Lla:  L0259_2
  Spy:  SPy0926_2
  Spn:  SP0611_2
  Sau:  SA1462_2
  Lin:  lin1560_2
  Bsu:  BS_yrvE_2
  Bha:  BH1240_2
_______

[S] COG4200 Uncharacterized protein conserved in bacteria
  Cac:  CAC0286
  Bha:  BH0446 BH0447 BH0449 BH0450
  Ccr:  CC3279
_______

[H] COG4206 Outer membrane cobalamin receptor protein
  Eco:  btuB
  EcZ:  ZbtuB
  Ecs:  ECs4897
  Ype:  YPO3910
  Sty:  STM4130
  Vch:  VC0156
  Pae:  PA1271
  Rso:  RSc2400
  Bme:  BMEI0657
  Ccr:  CC1750 CC2695
_______

[P] COG4208 ABC-type sulfate transport system, permease component
  Mtu:  Rv2398c
  MtC:  MT2469
  Bha:  BH3129
  Syn:  slr1454
  Nos:  all0320
  Eco:  cysWm
  EcZ:  ZcysWm
  Ecs:  ECs3294
  Ype:  YPO3013
  Sty:  STM2442
  Vch:  VC0540
  Pae:  PA0281
  Xfa:  XF1346
  Nme:  NMB0880
  NmA:  NMA1098
  Rso:  RSc1346
  Atu:  AGc1505 AGl2654
  Sme:  SMb21131
  Bme:  BMEI0675 BMEI1839
  Mlo:  mlr1668
  Ccr:  CC1597
_______

[G] COG4209 ABC-type polysaccharide transport system, permease component
  Lla:  L129753
  Spy:  SPy1595
  Spn:  SP0090 SP1798
  Lin:  lin2117
  Bsu:  BS_lplB BS_yteP BS_yteQ
  Bha:  BH0484 BH0794 BH1065 BH1911 BH2112
  Atu:  AGl3564
_______

[G] COG4211 ABC-type glucose/galactose transport system, permease component
  Fnu:  FN1167
  Eco:  mglC
  EcZ:  ZmglC
  Ecs:  ECs3040
  Ype:  YPO1509
  Sty:  STM2188
  Vch:  VC1328
  Hin:  HI0824
  Pmu:  PM1040
  Tpa:  TP0686
_______

[G] COG4213 ABC-type xylose transport system, periplasmic component
  Bha:  BH3442
  Eco:  xylF
  EcZ:  ZxylF
  Ecs:  ECs4449
  Ype:  YPO4037
  Hin:  HI1111
  Rso:  RSp1633
  Atu:  AGc4267 AGl2505
  Sme:  SMb20895 SMb20902
  Bme:  BMEII0146 BMEII0359 BMEII0360 BMEII0983
  Mlo:  mll3713 mll5659
  Mpu:  MYPU_3430
_______

[G] COG4214 ABC-type xylose transport system, permease component
  Bha:  BH3440
  Eco:  xylH
  EcZ:  ZxylH
  Ecs:  ECs4451
  Ype:  YPO4035
  Hin:  HI1109
  Rso:  RSp1635
  Atu:  AGc4262 AGl2507
  Sme:  SMb20893 SMb20903
  Bme:  BMEII0144 BMEII0362 BMEII0981
  Mlo:  mll3711 mll5656
  Mpu:  MYPU_3450_2
_______

[E] COG4215 ABC-type arginine transport system, permease component
  Eco:  artQ hisQ
  EcZ:  ZartQ ZhisQ
  Ecs:  ECs0945 ECs3192
  Ype:  YPO1350 YPO2775
  Sty:  STM0889 STM2353
  Vch:  VC1862 VCA0758
  Pae:  PA0889 PA2924 PA5154
  Hin:  HI1178
  Pmu:  PM0125
  Atu:  AGc3450 AGc4293 AGpT66
  Sme:  SMa0493 SMc00139 SMc02258
  Mlo:  mll5200 mll6986 mlr0550
_______

[H] COG4218 Tetrahydromethanopterin S-methyltransferase, subunit F
  Mac:  MA0271
  Mth:  MTH1158
  Mja:  MJ0852
  Mka:  MK1485
_______

[KT] COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
  Cac:  CAC3437
  Sau:  SA0039_1 SAP011_1
  Ccr:  CC1639_1 CC2754 CC3151 CC3508_1
_______

[L] COG4220 Phage DNA packaging protein, Nu1 subunit of terminase
  Eco:  nohA nohB
  EcZ:  Z1882 Z2124 Z2365
  Ecs:  ECs1101 ECs1105 ECs1629 ECs2180 ECs2736
  Sty:  STM2609
  Xfa:  XF0710 XF2501
  Atu:  AGc800_2
_______

[R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity
  Hbs:  VNG0115G VNG0523G
  Sce:  YMR226c
  Spo:  SPAC521.03
  Fnu:  FN1433
  Dra:  DR0543
  Cgl:  Cgl2154
  Mtu:  Rv0484c
  MtC:  MT0502
  Lla:  L108008 L179660
  Spn:  SP1909
  Sau:  SA2266
  Lin:  lin0452
  Syn:  slr0315
  Nos:  all0475 alr2142
  Eco:  ydfG
  EcZ:  Z0343 ZydfG
  Ecs:  ECs0306 ECs2148
  Sty:  STM1511
  Vch:  VCA1057
  Pae:  PA4907
  Hin:  HI1430
  Pmu:  PM0579
  Xfa:  XF0145 XF1744
  Nme:  NMB0924
  NmA:  NMA1120
  Rso:  RSc0730 RSp0935
  Hpy:  HP0357
  jHp:  jhp1023
  Cje:  Cj0833c
  Atu:  AGc1567 AGl1076 AGl1165 AGl1487
  Sme:  SMa0320 SMa2343 SMc02039 SMc02040
  Bme:  BMEII0980
_______

[S] COG4222 Uncharacterized protein conserved in bacteria
  Dra:  DRB0111_1 DRB0111_3
  Syn:  slr1087
  Nos:  all0275_1 all0275_3 all3208 alr4238_1 alr4238_3
  Ype:  YPO3640
  Cje:  Cj0728
  Atu:  AGc2125 AGc4118
  Sme:  SMc00620
  Mlo:  mlr1518
_______

[S] COG4223 Uncharacterized protein conserved in bacteria
  Atu:  AGc4814
  Sme:  SMc03233
  Bme:  BMEI0178
  Mlo:  mll4219
  Ccr:  CC0074
_______

[S] COG4224 Uncharacterized protein conserved in bacteria
  Fnu:  FN0041
  Cac:  CAC2726
  Lla:  L104681
  Spy:  SPy1687
  Spn:  SP1473
  Sau:  SA1176 SA2360
  Lin:  lin0497 lin1342
  Bsu:  BS_ynzC
  Bha:  BH2353
_______

[R] COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
  Cac:  CAC0359
  Bsu:  BS_yesR BS_yteR
  Bha:  BH0485 BH1120
  Ype:  YPO0840
  Sty:  STM1911
  Atu:  AGl3363 AGl618
_______

[S] COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters
  Dra:  DRB0141
  Nos:  all5276
  EcZ:  Z4882
  Ecs:  ECs4356
  Xfa:  XF1668
  Rso:  RSc1697
  Sme:  SMa1990 SMc02887
  Rco:  RC1071_2
_______

[L] COG4227 Antirestriction protein
  Xfa:  XF2061_1
  Atu:  AGpA151 AGpT206
  Mlo:  mll9305 mlr6154 mlr9701
_______

[R] COG4228 Mu-like prophage DNA circulation protein
  Ecs:  ECs4983
  Ype:  YPO1246
  Hin:  HI1515
  Nme:  NMB1109
  NmA:  NMA1319 NMA1831
_______

[C] COG4229 Predicted enolase-phosphatase
  Sce:  YEL038w
  Spo:  SPAC644.08
  Aae:  aq_1977
  Pae:  PA1685
  Xfa:  XF2211
_______

[C] COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase
  Eco:  putA_2
  EcZ:  ZputA_2
  Ecs:  ECs1260_2
  Ype:  YPO1851_2
  Sty:  STM1124_2
  Pae:  PA0782_2
  Pmu:  PM0589_2
  Nme:  NMB0401_2
  NmA:  NMA2084_2
  Rso:  RSc3301_2
  Atu:  AGl1394_2
  Sme:  SMc02181_2
  Bme:  BMEII0564_2
  Mlo:  mll1160_2
  Ccr:  CC0804_2
_______

[C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
  Afu:  AF1489
  Mac:  MA1022 MA1727 MA1982
  Mth:  MTH1852
  Tac:  Ta1012
  Tvo:  TVN0577
  Pho:  PH0765 PH1138
  Pab:  PAB0718 PAB0855
  Pya:  PAE3477 PAE3478
  Sso:  SSO2067
  Cac:  CAC2001
  Rso:  RSc1829 RSc3122_1
  Mlo:  mlr5175_1 mlr5448
  Ccr:  CC3176_1
_______

[OC] COG4232 Thiol:disulfide interchange protein
  Eco:  dsbD
  EcZ:  ZdsbD
  Ecs:  ECs5117
  Ype:  YPO0345
  Sty:  STM1114_2 STM4323
  Vch:  VC2701
  Pae:  PA2478 PA4845
  Hin:  HI0885
  Pmu:  PM0221
  Xfa:  XF0620
  Nme:  NMB1519
  NmA:  NMA1719
  Rso:  RSc2990
  Cje:  Cj0603c
  Ccr:  CC0217_2
  Ctr:  CT595_2
  Cpn:  CPn0786_2
_______

[OC] COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis
  Sty:  STM1114_1
  Atu:  AGc1426
  Sme:  SMc00073
  Bme:  BMEI1455
  Mlo:  mll7509
  Ccr:  CC0217_1
  Ctr:  CT595_1
  Cpn:  CPn0786_1
_______

[O] COG4235 Cytochrome c biogenesis factor
  Eco:  ccmH_2 nrfG
  EcZ:  ZccmH_2 ZnrfG
  Ecs:  ECs3083_2 ECs5058
  Ype:  YPO2742
  Sty:  STM2247_2 STM3812_2 STM4282
  Pae:  PA1483
  Hin:  HI0934_2 HI1097m
  Pmu:  PM0013 PM0030
  Xfa:  XF2463
  Atu:  AGc1784
  Sme:  SMc02361
  Bme:  BMEI1334
  Mlo:  mlr7688
  Ccr:  CC2762
_______

[C] COG4237 Hydrogenase 4 membrane component (E)
  Tvo:  TVN1454
  Sso:  SSO1025
  Mtu:  Rv0085
  MtC:  MT0092
  Eco:  hyfE
  EcZ:  ZhyfE
  Ecs:  ECs3347
_______

[M] COG4238 Murein lipoprotein
  Eco:  lpp yqhH
  EcZ:  Zlpp ZyqhH
  Ecs:  ECs2384 ECs3899
  Ype:  YPO2394
  Sty:  STM1376 STM1377
  Vch:  VCA0059
  Mlo:  msl0439
_______

[R] COG4239 ABC-type uncharacterized transport system, permease component
  Eco:  yejE
  EcZ:  ZyejE
  Ecs:  ECs3071
  Ype:  YPO1271
  Sty:  STM2218
  Vch:  VCA0589
  Pae:  PA1808 PA2060
  Rso:  RSc1175
  Hpy:  HP0251
  jHp:  jhp0236
  Atu:  AGc319
  Sme:  SMc02830
  Bme:  BMEI1937
  Mlo:  mll5492
  Bbu:  BB0746
_______

[R] COG4240 Predicted kinase
  Sce:  YGR205w
  Spo:  SPAC630.09c
  Nos:  alr2873
  Ccr:  CC2910
_______

[S] COG4241 Predicted membrane protein
  Cac:  CAC3719
  Sau:  SA0012
  Bsu:  BS_yybS
  Bha:  BH4032
  Syn:  sll1372
  Nos:  alr0296
_______

[QP] COG4242 Cyanophycinase and related exopeptidases
  Syn:  slr2001
  Nos:  all0571 all2506 all3880
  Ccr:  CC0577
_______

[S] COG4243 Predicted membrane protein
  Pya:  PAE1303 PAE2513
  Sso:  SSO1608 SSO1874
  Ape:  APE1727 APE2462
  Cgl:  Cgl0786
  Mtu:  Rv2968c
  MtC:  MT3046
  Mle:  ML1666
  Syn:  slr0565
  Nos:  all1220
_______

[S] COG4244 Predicted membrane protein
  Aae:  aq_811
  Syn:  sll1485 sll1486
  Nos:  all3197 alr2729 alr2730
  Pae:  PA2415
  Sme:  SMb21357 SMb21365
  Mlo:  mll6613
_______

[R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
  Nos:  alr2822
  Eco:  yegL
  EcZ:  Z3241
  Ecs:  ECs2881
  Ype:  YPO0594 YPO0595 YPO0597
  Hpy:  HP0428
_______

[S] COG4246 Uncharacterized protein conserved in bacteria
  Atu:  AGl2413
  Sme:  SMc00702
  Mlo:  mll3560
  Ccr:  CC0671
_______

[I] COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
  Bsu:  BS_yodV
  Nos:  alr4238_2
  Ccr:  CC1295
_______

[R] COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains
  Dra:  DR2546
  Nos:  alr2824_1
  Eco:  yegI
  EcZ:  Z3239
  Ecs:  ECs2879
_______

[R] COG4249 Uncharacterized protein containing caspase domain
  Nos:  all0283_1 all0284_1 all2124_1 all3226_1 all5017 alr3676_1
  Xfa:  XF2779_3
  Mlo:  mll2372 mll5190_1 mlr1170_1 mlr1804_1 mlr2366 mlr3303_2 mlr3463
        mlr7482
_______

[T] COG4250 Predicted sensor protein/domain
  Hbs:  VNG0742H
  Syn:  slr0484_1
  Nos:  all0330_1 all4304_1
_______

[T] COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase)
  Dra:  DRA0050
  Syn:  slr0473
  Nos:  all2899 alr3157
  Pae:  PA4117
  Atu:  AGc3620 AGc3927_1
_______

[T] COG4252 Predicted transmembrane sensor domain
  Dra:  DR1633_1
  Syn:  sll0646_1
  Nos:  all1118_1 all1178_1 all1219_1 all3180_2 all3347_1 all4838_1 all5309_1
        all7310_2 alr0357 alr1378_2 alr1575 alr1869_1 alr5151_1
  Pae:  PA4036_1
  Rso:  RSc1075_1
  Sme:  SMb20776_1 SMc02176_1 SMc04307_1
  Ccr:  CC3327_1
_______

[S] COG4253 Uncharacterized protein conserved in bacteria
  Ype:  YPO0962 YPO0967 YPO0970_2 YPO1472_2 YPO1475
  Pae:  PA0262_2 PA1511_2
  Rso:  RSc0958_2 RSc1944_2 RSc3220_2 RSp0103_2 RSp0175_2 RSp0518_2 RSp0629_2
        RSp0738_2 RSp0750_2 RSp0768_2
_______

[S] COG4254 Uncharacterized protein conserved in bacteria
  Pae:  PA4035
  Rso:  RSc1074
  Sme:  SMc04306
  Ccr:  CC3326
_______

[S] COG4255 Uncharacterized protein conserved in bacteria
  Xfa:  XF1109
  Nme:  NMB0314
  NmA:  NMA2173
  Rso:  RSc1116
_______

[P] COG4256 Hemin uptake protein
  Eco:  ydiE
  EcZ:  ZydiE
  Ecs:  ECs2412
  Sty:  STM1346
  Rso:  RSc1966
  Sme:  SMc01747
  Mlo:  msl1154
_______

[V] COG4257 Streptogramin lyase
  Syn:  sll0173
  Pae:  PA0468
  Rso:  RSc3155 RSp0135
_______

[R] COG4258 Predicted exporter
  EcZ:  Z4861
  Ecs:  ECs4336
  Xfa:  XF0777
  Rso:  RSc0429 RSp0362
_______

[S] COG4259 Uncharacterized protein conserved in bacteria
  Ype:  YPO2971
  Pae:  PA0046
  Nme:  NMB1125 NMB1163
  NmA:  NMA1334
  Rso:  RSp0674
_______

[S] COG4260 Putative virion core protein (lumpy skin disease virus)
  Lla:  L186490
  Bsu:  BS_ydjI
  Bha:  BH1805
  Rso:  RSp1296
_______

[R] COG4261 Predicted acyltransferase
  EcZ:  Z4858_2
  Ecs:  ECs4333_2
  Xfa:  XF0775
  Rso:  RSc0431 RSp0366_2
_______

[R] COG4262 Predicted spermidine synthase with an N-terminal membrane domain
  Aae:  aq_1350
  Cgl:  Cgl2645
  Mtu:  Rv2601
  MtC:  MT2675
  Rso:  RSp1306 RSp1337
_______

[C] COG4263 Nitrous oxide reductase
  Pae:  PA3392
  Rso:  RSp1368
  Sme:  SMa1182
  Bme:  BMEII0973 BMEII0974
_______

[Q] COG4264 Siderophore synthetase component
  Hbs:  VNG6212G VNG6216G
  Sau:  SA0114 SA0116 SA0117 SA1981 SA1983
  Bha:  BH2618 BH2622
  Nos:  all0390 all0394
  Ype:  YPO0992 YPO1532 YPO1538
  Rso:  RSp0419 RSp0421 RSp0422
  Sme:  SMa2404 SMa2410
_______

[F] COG4266 Allantoicase
  Sce:  YIR029w
  Spo:  SPAC1F7.09c
  Pae:  PA1515
  Rso:  RSc3274
  Sme:  SMb21283
_______

[S] COG4267 Predicted membrane protein
  Tma:  TM1408
  Fnu:  FN0384
  Cac:  CAC0735
  Pae:  PA3058
  Rso:  RSc2270
_______

[V] COG4268 McrBC 5-methylcytosine restriction system component
  Mac:  MA2118
  Dra:  DRB0144
  Spn:  SP1250
  Eco:  mcrC
  Ype:  YPO0388
  Cje:  Cj0140
_______

[S] COG4269 Predicted membrane protein
  Dra:  DR2088
  Eco:  yjgN
  EcZ:  ZyjgN
  Ecs:  ECs5234
  Ype:  YPO0399
  Sty:  STM4474
  Rso:  RSc0643
  Atu:  AGc349
  Sme:  SMc00782
_______

[S] COG4270 Predicted membrane protein
  Dra:  DR2024
  Sau:  SA1937
  Nos:  all4478
  Pae:  PA0806
_______

[K] COG4271 Predicted nucleotide-binding protein containing TIR -like domain
  Mac:  MA3266_1
  Xfa:  XF0629
  Rso:  RSc2614
  Ccr:  CC2702_2
  Mpu:  MYPU_0730
_______

[S] COG4272 Predicted membrane protein
  Tac:  Ta0415
  Tvo:  TVN1156
  Sso:  SSO0014
  Lla:  L83104
  Lin:  lin2504
_______

[S] COG4273 Uncharacterized conserved protein
  Mac:  MA3939 MA4201
  Pho:  PH0881
  Pae:  PA3880
  Rso:  RSp0967
_______

[S] COG4274 Uncharacterized conserved protein
  Afu:  AF0027
  Pya:  PAE2031
  Rso:  RSc0133
  Sme:  SMc01562
  Mlo:  mll1340 mll2227 mll2465
_______

[S] COG4275 Uncharacterized conserved protein
  Tvo:  TVN1199
  Rso:  RSp0554 RSp0556
  Sme:  SMc00911_2
  Mlo:  mlr5406_2
_______

[S] COG4276 Uncharacterized conserved protein
  Hbs:  VNG1120H
  Cgl:  Cgl1576_1
  Bha:  BH1480
  Nos:  all0792
_______

[R] COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif
  Mth:  MTH1458
  Fnu:  FN0954
  Cac:  CAC3343
  Atu:  AGc3963
  Ccr:  CC2332
_______

[S] COG4278 Uncharacterized conserved protein
  Sso:  SSO1774
  Nos:  all3127
  Pae:  PA5273
  Rso:  RSp1520
_______

[S] COG4279 Uncharacterized conserved protein
  Mac:  MA0190
  Sso:  SSO1656
  Cgl:  Cgl1139
  Mtu:  Rv2102
  MtC:  MT2162
  Syn:  slr1429
  Nos:  all4155 all7171
_______

[S] COG4280 Predicted membrane protein
  Sso:  SSO2772
  Nos:  alr1385 alr2659
  Mlo:  mll4972
_______

[I] COG4281 Acyl-CoA-binding protein
  Sce:  YGR037c
  Spo:  SPBC1539.06
  Dra:  DR0166
  Rso:  RSc1366
_______

[G] COG4282 Protein involved in beta-1,3-glucan synthesis
  Sce:  YGR229c
  Spo:  SPBC30D10.17c
  Dra:  DRA0221
  Sme:  SMc00549
_______

[S] COG4283 Uncharacterized conserved protein
  Sce:  YDR540c
  Fnu:  FN0626 FN1248
  Lla:  L144693
  Spn:  SP0939
  Lin:  lin2532
  Pmu:  PM0632
_______

[G] COG4284 UDP-glucose pyrophosphorylase
  Sce:  YDL103c YHL012w YKL035w
  Spo:  SPBC1289.08 SPCC1322.04 SPCC794.10
  Ecu:  ECU03g0280 ECU11g1780
  Sau:  SA1974
  Ctr:  CT715
  Cpn:  CPn0856
  Bbu:  BB0003
_______

[S] COG4285 Uncharacterized conserved protein
  Sce:  YDL141w_1
  Spo:  SPBC30D10.07c_1
  Rco:  RC0781
  Ctr:  CT035
  Cpn:  CPn0128
_______

[S] COG4286 Uncharacterized conserved protein related to MYG1 family
  Sce:  YER156c
  Spo:  SPAC694.04c
  Ecu:  ECU03g1360 ECU07g1790
  Atu:  AGl2056
  Ctr:  CT386
  Cpn:  CPn0489
_______

[R] COG4287 PhoPQ-activated pathogenicity-related protein
  Tma:  TM0945
  Sty:  STM1544
  Xfa:  XF1384
  Rso:  RSp0161
_______

[S] COG4288 Uncharacterized protein conserved in bacteria
  Tma:  TM1070
  Nos:  alr3166
  Sme:  SMb20096 SMb20098
_______

[S] COG4289 Uncharacterized protein conserved in bacteria
  Tma:  TM1061
  Ype:  YPO0843
  Atu:  AGl3401
  Sme:  SMb20536
_______

[F] COG4290 Guanyl-specific ribonuclease Sa
  Dra:  DR0453
  Cgl:  Cgl2217
  Xfa:  XF2615
  Rso:  RSc2766
_______

[S] COG4291 Predicted membrane protein
  Dra:  DR0351
  Rso:  RSp0410
  Atu:  AGc2725
  Sme:  SMc01272
  Bme:  BMEI1821
  Mlo:  mlr0876
_______

[S] COG4292 Predicted membrane protein
  Dra:  DR1273
  Sau:  SA0341
  Lin:  lin0407
  Rso:  RSc0230
  Atu:  AGl1854
  Sme:  SMa1704
_______

[S] COG4293 Uncharacterized protein conserved in bacteria
  Dra:  DR0097
  Mtu:  Rv2825c Rv2828c
  MtC:  MT2892 MT2895.1
  Nos:  all2053
_______

[L] COG4294 UV damage repair endonuclease
  Spo:  SPBC19C7.09c
  Dra:  DR1819
  Bsu:  BS_ywjD
  Bha:  BH2597
  Nos:  alr1263
_______

[S] COG4295 Uncharacterized protein conserved in bacteria
  Dra:  DRB0099
  Cac:  CAC2549
  Nos:  alr1372
_______

[S] COG4296 Uncharacterized protein conserved in bacteria
  Dra:  DR0388
  Cac:  CAC0781
  Nos:  all0924
_______

[S] COG4297 Uncharacterized protein containing double-stranded beta helix domain
  Dra:  DR0703
  Bsu:  BS_yjlB
  Atu:  AGl3477
  Sme:  SMb21450
_______

[S] COG4298 Uncharacterized protein conserved in bacteria
  Dra:  DR1094
  Nos:  asl0046
  Mlo:  msr2457
_______

[S] COG4299 Uncharacterized conserved protein
  Dra:  DR1602
  Nos:  all1887
  Ccr:  CC0541
_______

[P] COG4300 Predicted permease, cadmium resistance protein
  Cgl:  Cgl0883
  Lla:  L13744
  Spy:  SPy2162
  Spn:  SP1625
  Sau:  SAP005
  Nos:  all3255
  Nme:  NMB1955
  NmA:  NMA0496
_______

[S] COG4301 Uncharacterized conserved protein
  Spo:  SPBC1604.01_1
  Mtu:  Rv3701c
  MtC:  MT3804
  Syn:  slr0865
  Nos:  alr2712
  Rso:  RSc0950
_______

[E] COG4302 Ethanolamine ammonia-lyase, small subunit
  Fnu:  FN0080
  Cac:  CAC2717
  Lin:  lin1140
  Eco:  eutC
  EcZ:  ZeutC
  Ecs:  ECs3311
  Sty:  STM2457
  Pae:  PA4025
  Rso:  RSc3126
_______

[E] COG4303 Ethanolamine ammonia-lyase, large subunit
  Fnu:  FN0079
  Cac:  CAC2718
  Lin:  lin1139
  Eco:  eutB
  EcZ:  ZeutB
  Ecs:  ECs3312
  Sty:  STM2458
  Pae:  PA4024
  Rso:  RSc3127
_______

[S] COG4304 Uncharacterized protein conserved in bacteria
  Cac:  CAC0351
  Ype:  YPO2489
  Nme:  NMB0222
  NmA:  NMA0037
_______

[G] COG4305 Endoglucanase C-terminal domain/subunit and related proteins
  Bsu:  BS_yoaJ
  Xfa:  XF0810_2
  Rso:  RSc0818
_______

[S] COG4306 Uncharacterized protein conserved in bacteria
  Cac:  CAC1943
  Xfa:  XF0630
  Rso:  RSc2615
_______

[S] COG4307 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2568c
  MtC:  MT2644
  Rso:  RSp1032
  Atu:  AGc1431
  Mlo:  mlr4376
_______

[Q] COG4308 Limonene-1,2-epoxide hydrolase
  Mtu:  Rv2740
  Mle:  ML0984
  Rso:  RSc2589 RSc2590
  Ccr:  CC2961
_______

[S] COG4309 Uncharacterized conserved protein
  Sso:  SSO1812_1
  Cac:  CAC0072
  Rso:  RSp1504
  Atu:  AGl963
  Sme:  SMa1261
  Bme:  BMEII0995
_______

[R] COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain
  Cac:  CAC2195
  Cje:  Cj1295
  Atu:  AGl42GM
  Bme:  BMEII0831
_______

[E] COG4311 Sarcosine oxidase delta subunit
  Pae:  PA5417
  Rso:  RSc1102 RSp0047
  Atu:  AGl1105 AGl1276 AGl1575
  Sme:  SMc02607 SMc03932
  Bme:  BMEI1721
  Mlo:  msl3109 msl5231 msl6239 msl7305 msr1274
_______

[S] COG4312 Uncharacterized protein conserved in bacteria
  Pae:  PA1350
  Rso:  RSc1113
  Atu:  AGc1560
  Sme:  SMb21565 SMc00803 SMc01408
  Mlo:  mll1876 mll2522 mlr1911 mlr3755
_______

[C] COG4313 Protein involved in meta-pathway of phenol degradation
  Pae:  PA2421 PA2474 PA5325
  Rso:  RSc1833 RSp0231 RSp1468
  Sme:  SMb20914
  Mlo:  mll5467
_______

[C] COG4314 Predicted lipoprotein involved in nitrous oxide reduction
  Pae:  PA3396
  Nme:  NMB0580
  NmA:  NMA0765
  Rso:  RSp1373
  Sme:  SMa1186
  Bme:  BMEII0969
_______

[S] COG4315 Uncharacterized protein conserved in bacteria
  Pae:  PA5359
  Rso:  RSc2984
  Atu:  AGc2741 AGc3676
  Sme:  SMc01418
_______

[S] COG4316 Uncharacterized protein conserved in bacteria
  Hin:  HI0931
  Nme:  NMB1980
  NmA:  NMA0464
  Mlo:  mll1954
_______

[S] COG4317 Uncharacterized protein conserved in bacteria
  Bha:  BH3806
  Pae:  PA2697
  Rso:  RSc0241
  Atu:  AGl1747
  Sme:  SMa1820
_______

[S] COG4318 Uncharacterized protein conserved in bacteria
  Pae:  PA4384
  Rso:  RSc0706
  Atu:  AGc2837
  Mlo:  mlr0735
_______

[S] COG4319 Ketosteroid isomerase homolog
  Bsu:  BS_yybH
  Nos:  alr1581
  Pae:  PA0557 PA1325
  Rso:  RSc3100 RSp0600
  Sme:  SMa0537 SMc00281 SMc01148_1
  Mlo:  mlr2180
_______

[S] COG4320 Uncharacterized protein conserved in bacteria
  Xfa:  XF1486
  Rso:  RSc1459
  Mlo:  mlr9736
_______

[R] COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis
  Pae:  PA4335
  Rso:  RSc0415
  Atu:  AGc3716 AGl852
  Sme:  SMc01452
  Bme:  BMEI0601 BMEI0792
  Mlo:  mll6467 msr1476
_______

[S] COG4322 Uncharacterized protein conserved in bacteria
  Xfa:  XF2675
  Rso:  RSc3360
  Ccr:  CC2745
_______

[S] COG4323 Predicted membrane protein
  Pae:  PA3216
  Rso:  RSc1560
  Ccr:  CC3163
_______

[R] COG4324 Predicted aminopeptidase
  Pae:  PA0063
  Rso:  RSc2858
  Mlo:  mll2963
_______

[S] COG4325 Predicted membrane protein
  Cgl:  Cgl2455
  Mtu:  Rv1290c
  MtC:  MT1328
  Nos:  alr5319
  Pmu:  PM1097
_______

[R] COG4326 Sporulation control protein
  Bsu:  BS_ygaI
  Nos:  alr4153
  Vch:  VC0039
_______

[S] COG4327 Predicted membrane protein
  Bha:  BH3744
  Nos:  asl1679
  Vch:  VC2704
  Rso:  RSc0548
_______

[S] COG4328 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0776c
  MtC:  MT0800
  Syn:  slr1094
  Nos:  alr1271
  Sme:  SMc03748
_______

[S] COG4329 Predicted membrane protein
  Bha:  BH0893
  Nos:  alr5030
  Sme:  SMb20139
_______

[S] COG4330 Predicted membrane protein
  Sau:  SA0648
  Lin:  lin2252
  Syn:  sll0397
  Nos:  all1251
  Tpa:  TP0033
_______

[S] COG4331 Predicted membrane protein
  Cac:  CAP0016
  Lla:  L30853
  Ype:  YPO2961
  Mlo:  mll8055
_______

[S] COG4332 Uncharacterized protein conserved in bacteria
  Cac:  CAC0055
  Sty:  STM4502
  Atu:  AGc2733
  Mlo:  mlr4111
_______

[S] COG4333 Uncharacterized protein conserved in bacteria
  Sau:  SA0054
  EcZ:  Z5884
  Ecs:  ECs5248
  Sme:  SMb20554
_______

[S] COG4334 Uncharacterized protein conserved in bacteria
  Lla:  L179277
  Xfa:  XF1736
  Sme:  SMa0561
_______

[L] COG4335 DNA alkylation repair enzyme
  Bsu:  BS_yhaZ
  Pmu:  PM1750
  Atu:  AGl2657 AGl2659
_______

[S] COG4336 Uncharacterized conserved protein
  Spo:  SPAC5H10.01
  Cgl:  Cgl2492
  Bsu:  BS_ycsI
  Pae:  PA2116
  Atu:  AGl1868
_______

[S] COG4337 Uncharacterized protein conserved in bacteria
  Nos:  all2909
  Vch:  VCA0237
  Ccr:  CC1290
_______

[S] COG4338 Uncharacterized protein conserved in bacteria
  Nos:  asl3923
  Vch:  VC1389
  Ccr:  CC1139
_______

[S] COG4339 Uncharacterized protein conserved in bacteria
  Nos:  all0539
  Pae:  PA1495
  Mlo:  mll0172
_______

[S] COG4340 Uncharacterized protein conserved in bacteria
  Nos:  all3084
  Vch:  VC1183
  Ccr:  CC3057
_______

[R] COG4341 Predicted HD phosphohydrolase
  Nos:  all2220
  Pae:  PA2804
  Rso:  RSc3336
  Mlo:  mll1439 mlr5040
_______

[S] COG4342 Uncharacterized protein conserved in archaea
  Pho:  PH1200 PH1863
  Sso:  SSO0143 SSO0782
  Ape:  APE0716
_______

[S] COG4343 Uncharacterized protein conserved in archaea
  Afu:  AF1879
  Pya:  PAE0082 PAE0201
  Sso:  SSO1391 SSO1451
  Ape:  APE1241
_______

[S] COG4344 Uncharacterized protein conserved in archaea
  Tac:  Ta0317
  Tvo:  TVN0441
  Pho:  PH0984
  Sso:  SSO2263
_______

[S] COG4345 Uncharacterized protein conserved in archaea
  Pho:  PH1118
  Pab:  PAB1631
  Pya:  PAE3173
  Sso:  SSO1098
  Ape:  APE1866
_______

[O] COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase
  Pho:  PH1648
  Pab:  PAB2015
  Pya:  PAE1623
  Sso:  SSO3225
  Ape:  APE0199
_______

[S] COG4347 Predicted membrane protein
  Hbs:  VNG1791C
  Sau:  SA1294
  Lin:  lin2034
  Bsu:  BS_ypjA
  Bha:  BH1675
_______

[J] COG4352 Ribosomal protein L13E
  Pya:  PAE1639_1
  Sso:  SSO2442
  Ape:  APES024
  Sce:  YDL082w YMR142c
  Spo:  SPAC664.05
  Ecu:  ECU03g0320
_______

[S] COG4353 Uncharacterized conserved protein
  Pya:  PAE1234
  Sso:  SSO0085
  Ape:  APE1627
  Aae:  aq_1966
_______

[G] COG4354 Predicted bile acid beta-glucosidase
  Sso:  SSO1353 SSO1948 SSO2674 SSO3039
  Syn:  sll1775
  Nos:  alr2816
_______

[S] COG4357 Uncharacterized conserved protein
  Sce:  YKL084w
  Spo:  SPAC29B12.12
  Spy:  SPy0205
  Spn:  SP1428
  Sau:  SA0692
_______

[E] COG4359 Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling
  Sce:  YNL010w
  Spo:  SPAC823.14
  Cac:  CAC1625
  Bsu:  BS_ykrX
_______

[F] COG4360 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II)
  Sce:  YCL050c YDR530c
  Syn:  sll0509
  Nos:  alr4466
_______

[PE] COG4362 Nitric oxide synthase, oxygenase domain
  Dra:  DR2597
  Sau:  SA1730
  Bsu:  BS_yflM
  Bha:  BH0823
_______

[S] COG4365 Uncharacterized protein conserved in bacteria
  Dra:  DR1647
  Sau:  SA1020
  Bsu:  BS_yllA
  Bha:  BH2577
_______

[S] COG4367 Uncharacterized protein conserved in bacteria
  Dra:  DR1049
  Lla:  L144155
  Sau:  SA2363
  Lin:  lin0863
_______

[S] COG4370 Uncharacterized protein conserved in bacteria
  Dra:  DR2625
  Syn:  sll0192 slr1384
  Nos:  all4892
_______

[S] COG4371 Predicted membrane protein
  Dra:  DR1616
  Syn:  slr0404
  Nos:  alr1346
_______

[S] COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain
  Dra:  DR2133
  Syn:  sll1424
  Nos:  alr4393
_______

[R] COG4373 Mu-like prophage FluMu protein gp28
  Dra:  DRA0094
  Ecs:  ECs4969
  Hin:  HI1500
_______

[S] COG4374 Uncharacterized protein conserved in bacteria
  Dra:  DRB0012a
  Ccr:  CC0841
  Rco:  RC0510
_______

[S] COG4377 Predicted membrane protein
  Spn:  SP1391
  Bsu:  BS_yhfC
  Rso:  RSp0010
_______

[S] COG4378 Uncharacterized protein conserved in bacteria
  Cac:  CAC1602
  Bha:  BH0515
  Cje:  Cj1384c
_______

[R] COG4379 Mu-like prophage tail protein gpP
  Ecs:  ECs4984
  Ype:  YPO1247
  Hin:  HI1516m
  Nme:  NMB1110
  NmA:  NMA1320 NMA1830
_______

[S] COG4380 Uncharacterized protein conserved in bacteria
  Ype:  YPO2970
  Pae:  PA0047
  Nme:  NMB1124 NMB1162
  NmA:  NMA1332
  Rso:  RSp0675
_______

[S] COG4381 Mu-like prophage protein gp46
  Ecs:  ECs4986
  Ype:  YPO1249
  Hin:  HI1519
  Nme:  NMB1112
  NmA:  NMA1322 NMA1828
_______

[S] COG4382 Mu-like prophage protein gp16
  Ecs:  ECs4960
  Hin:  HI1488
  Nme:  NMB0985
  NmA:  NMA1186 NMA1301 NMA1867
_______

[S] COG4383 Mu-like prophage protein gp29
  Ecs:  ECs4970
  Hin:  HI1501 HI1571
  Nme:  NMB1095
  NmA:  NMA1314 NMA1851
_______

[S] COG4384 Mu-like prophage protein gp45
  Ecs:  ECs4985
  Ype:  YPO1248
  Hin:  HI1518
  Nme:  NMB1111
  NmA:  NMA1321 NMA1829
_______

[R] COG4385 Bacteriophage P2-related tail formation protein
  Sty:  STM2707 STM4201
  Pae:  PA0619
  Xfa:  XF0725 XF2487
  Rso:  RSc1922
  Atu:  AGc810
_______

[R] COG4386 Mu-like prophage tail sheath protein gpL
  Ecs:  ECs4979
  Ype:  YPO1242
  Hin:  HI1511
  Nme:  NMB1104
  NmA:  NMA1841
_______

[S] COG4387 Mu-like prophage protein gp36
  Ecs:  ECs4976
  Hin:  HI1508
  Nme:  NMB1101
  NmA:  NMA1844
_______

[R] COG4388 Mu-like prophage I protein
  Ecs:  ECs4973
  Hin:  HI1504
  Nme:  NMB1098
  NmA:  NMA1848
_______

[L] COG4389 Site-specific recombinase
  Pmu:  PM1468
  Nme:  NMB1278
  NmA:  NMA1485
  Rso:  RSc1012
_______

[S] COG4390 Uncharacterized protein conserved in bacteria
  Pmu:  PM1588
  Nme:  NMB0775
  NmA:  NMA0986
  Rso:  RSp0610
_______

[S] COG4391 Uncharacterized protein conserved in bacteria
  Xfa:  XF0101
  Nme:  NMB0542
  NmA:  NMA0721
  Rso:  RSc0566
  Atu:  AGc2898
  Sme:  SMc02115
  Bme:  BMEI1206
  Ccr:  CC0189
  Rco:  RC1362
_______

[S] COG4392 Predicted membrane protein
  Dra:  DR0634
  Lla:  L54406
  Spn:  SP0147
  Sau:  SAS001
  Lin:  lin1481
  Bha:  BH2911
  Vch:  VCA1003
  Pae:  PA2038
  Rso:  RSc0512 RSc0569
_______

[S] COG4393 Predicted membrane protein
  Fnu:  FN1355
  Ype:  YPO1943_1
  Pmu:  PM0451_1
  Cje:  Cj1660_1
_______

[S] COG4394 Uncharacterized protein conserved in bacteria
  Fnu:  FN0719
  Pae:  PA2852
  NmA:  NMA1132
  Rso:  RSc1070
_______

[S] COG4395 Uncharacterized protein conserved in bacteria
  Vch:  VC1964
  Pae:  PA5528
  Rso:  RSc0459
  Atu:  AGc12 AGl2266
  Sme:  SMc02786 SMc04202
  Bme:  BMEI0729 BMEI2053
  Mlo:  mll7160 mlr4544
  Ccr:  CC3741
  Rpr:  RP434
  Rco:  RC0604
_______

[R] COG4396 Mu-like prophage host-nuclease inhibitor protein Gam
  Ecs:  ECs4952
  Hin:  HI1483
  NmA:  NMA1291
_______

[R] COG4397 Mu-like prophage major head subunit gpT
  Ecs:  ECs4974
  Hin:  HI1505
  NmA:  NMA1847
_______

[S] COG4398 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0628c Rv0874c
  MtC:  MT0656 MT0897
  Syn:  sll0524
  Nos:  alr2851
_______

[S] COG4399 Uncharacterized protein conserved in bacteria
  Fnu:  FN1218
  Sau:  SA1664
  Lin:  lin2327
  Bsu:  BS_yheB
  Bha:  BH1148
  Syn:  sll0412
  Nos:  alr5253
_______

[E] COG4401 Chorismate mutase
  Lin:  lin2040
  Bsu:  BS_aroH
  Bha:  BH1658
  Syn:  sll0109
  Nos:  all4012
_______

[S] COG4402 Uncharacterized protein conserved in bacteria
  Mtu:  Rv3732
  MtC:  MT3837
  Syn:  slr1173
  Nos:  alr1998
_______

[V] COG4403 Lantibiotic modifying enzyme
  Cac:  CAC0082
  Spy:  SPy1914
  Spn:  SP0380 SP1950
  Bha:  BH0452 BH0455
  Nos:  all2025
_______

[S] COG4405 Uncharacterized protein conserved in bacteria
  Cac:  CAC1000
  Lla:  L158463
  Spn:  SP0796
  Lin:  lin2984
  Bsu:  BS_yhfF
  Bha:  BH0898
  EcZ:  Z0414
  Ype:  YPO1693
  Sty:  STM4186
_______

[S] COG4408 Uncharacterized protein conserved in bacteria
  Sau:  SA2256
  Bha:  BH2073
  Ype:  YPO1347
  Pae:  PA4835
_______

[G] COG4409 Neuraminidase (sialidase)
  Cgl:  Cgl1519
  Spn:  SP1326 SP1687
  Sty:  STM0928
  Vch:  VC1784
  Pmu:  PM0663 PM1000
_______

[S] COG4412 Uncharacterized protein conserved in bacteria
  Cac:  CAC0746
  Bsu:  BS_bpr_2
  Vch:  VCA0223_1
_______

[E] COG4413 Urea transporter
  Sau:  SA2081
  Ype:  YPO2672
  Pae:  PA1497
  Bme:  BMEI0642
_______

[R] COG4416 Mu-like prophage protein Com
  Cac:  CAC1900
  Ecs:  ECs4997
  Hin:  HI1522.1
_______

[S] COG4420 Predicted membrane protein
  Dra:  DRA0362
  Cgl:  Cgl1100
  Mtu:  Rv1231c
  MtC:  MT1269
  Lla:  L90946
  Atu:  AGc3054
  Sme:  SMb20255
  Mlo:  mlr0821 mlr4962
  Ccr:  CC2964
_______

[G] COG4421 Capsular polysaccharide biosynthesis protein
  Bha:  BH3368
  Ccr:  CC0631 CC0632 CC1848
  Rco:  RC0281
_______

[S] COG4422 Bacteriophage protein gp37
  Mtu:  Rv2734
  MtC:  MT2803.2
  Sme:  SMa2239
  Mlo:  mll4707 mlr7981
_______

[S] COG4423 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0608 Rv0623 Rv1740 Rv2760c
  MtC:  MT0637 MT0651 MT1782 MT2035 MT2830
  Sme:  SMb20629 SMc00899 SMc02716 SMc02988
  Mlo:  msl9358
_______

[S] COG4424 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0295c
  MtC:  MT0308
  Sme:  SMc01744 SMc04267
  Mlo:  mll3788
_______

[S] COG4425 Predicted membrane protein
  Cgl:  Cgl2849
  Mtu:  Rv1069c
  MtC:  MT1099
  Atu:  AGc1734
  Sme:  SMc01665
  Mlo:  mll6723
_______

[S] COG4427 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0690c
  MtC:  MT0718
  Atu:  AGl1570
  Sme:  SMc03928
  Ccr:  CC3144
_______

[S] COG4430 Uncharacterized protein conserved in bacteria
  Sau:  SA2238
  Lin:  lin1206
  Bsu:  BS_ydeI
  Bha:  BH2088
  Nos:  alr0739
  Sme:  SMc04166
  Mlo:  mll2043
  Ccr:  CC1241
_______

[S] COG4443 Uncharacterized protein conserved in bacteria
  Cac:  CAC0545
  Lla:  L114363
  Spy:  SPy0593
  Spn:  SP0782
  Lin:  lin0588
  Tpa:  TP0352
_______

[FJ] COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA
  Nos:  alr2921
  Sty:  STM4471
  Vch:  VC1910
  Pae:  PA1790
_______

[S] COG4446 Uncharacterized protein conserved in bacteria
  Syn:  sll1620
  Nos:  all1003 all4479
  Vch:  VC2378
_______

[R] COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor
  Syn:  slr2034
  Nos:  alr3844
  Pae:  PA3080
  Ccr:  CC0500
_______

[E] COG4448 L-asparaginase II
  Syn:  sll0585
  Nos:  alr4171
  Atu:  AGc1525
  Sme:  SMc00035
  Bme:  BMEI1378
  Mlo:  mlr7616
_______

[R] COG4449 Predicted protease of the Abi (CAAX) family
  Syn:  sll1477
  Nos:  alr1712
  Ccr:  CC3074
_______

[C] COG4451 Ribulose bisphosphate carboxylase small subunit
  Syn:  sll1031_2 slr0012
  Nos:  all0865_2 alr1526 alr1533_2
  Sme:  SMb20197
_______

[V] COG4452 Inner membrane protein involved in colicin E2 resistance
  Fnu:  FN1985
  Eco:  creD
  EcZ:  ZcreD
  Ecs:  ECs5358
  Ype:  YPO0894
  Sty:  STM4590
  Pae:  PA0465
  Atu:  AGc2138
_______

[S] COG4453 Uncharacterized protein conserved in bacteria
  Mtu:  Rv0918
  MtC:  MT0944 MT2871
  EcZ:  Z4776 Z4833
  Ecs:  ECs4261 ECs4308
  Sty:  STM2904 STM3652 STM4317
  Vch:  VCA0319 VCA0482
  Hin:  HI0420
  Xfa:  XFa0024
  Rso:  RSp1627
  Sme:  SMc00740 SMc04222
_______

[P] COG4454 Uncharacterized copper-binding protein
  Ape:  APE0294
  Nos:  all1020
  Vch:  VCA0260 VCA0261
  Pae:  PA2807
  Atu:  AGl1726
  Sme:  SMa1041 SMc02283
  Mlo:  mlr4711 mlr6585
_______

[R] COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion
  Ype:  YPO2727
  Sty:  STM0270
  Pae:  PA0086
  Atu:  AGl1050
_______

[S] COG4456 Virulence-associated protein and related proteins
  Syn:  ssl1300
  Sty:  PSLT107 STM3034
  Hin:  HI0321 HI0948
  Xfa:  XF1588 XF1695
  Sme:  SMc00686 SMc03949 SMc04408
  Mlo:  mll1671
  Ccr:  CC0032
_______

[S] COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor
  Ype:  YPO2290
  Sty:  STM1594
  Pmu:  PM1819
  Mlo:  mll9171
_______

[S] COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor
  Ype:  YPO2291
  Sty:  STM1595
  Pmu:  PM1820
  Mlo:  mll9170
_______

[C] COG4459 Periplasmic nitrate reductase system, NapE component
  Vch:  VC1694
  Pae:  PA1177
  Atu:  AGl921
  Sme:  SMa1241
_______

[S] COG4460 Uncharacterized protein conserved in bacteria
  Sty:  STM2910
  Pae:  PA1314
  Mlo:  mlr7181
_______

[S] COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein
  Mtu:  Rv1541c
  MtC:  MT1593
  Ype:  YPO0702 YPO2684
  Sty:  STM1236
  Pae:  PA1114
  Atu:  AGc3508
  Mlo:  mlr0530
_______

[K] COG4463 Transcriptional repressor of class III stress genes
  Cac:  CAC3192
  Lla:  L0223
  Spy:  SPy2074
  Spn:  SP2195
  Sau:  SA0480
  Lin:  lin0261
  Bsu:  BS_ctsR
  Bha:  BH0100
_______

[GM] COG4464 Capsular polysaccharide biosynthesis protein
  Cac:  CAC3045 CAC3062
  Spn:  SP0347
  Sau:  SA0146 SA2455
  Bsu:  BS_ywqE
  Bha:  BH3667
_______

[K] COG4465 Pleiotropic transcriptional repressor
  Cac:  CAC1786
  Lla:  L0243 L0244
  Spy:  SPy1777
  Spn:  SP1584
  Sau:  SA1098
  Lin:  lin1319
  Bsu:  BS_codY
  Bha:  BH2462
_______

[S] COG4466 Uncharacterized protein conserved in bacteria
  Cac:  CAC2904
  Lla:  L155040
  Spy:  SPy2181
  Spn:  SP2202
  Sau:  SA0452
  Lin:  lin0228
  Bsu:  BS_veg
  Bha:  BH0059
_______

[S] COG4467 Uncharacterized protein conserved in bacteria
  Lla:  L6328
  Spy:  SPy0405
  Spn:  SP0937
  Sau:  SA0444
  Lin:  lin0207
  Bsu:  BS_yabA
  Bha:  BH0046
_______

[G] COG4468 Galactose-1-phosphate uridyltransferase
  Fnu:  FN2108
  Cac:  CAC2961
  Lla:  L0027
  Spn:  SP1829 SP1852
  Bsu:  BS_galT
  Bha:  BH1109
_______

[R] COG4469 Competence protein
  Lla:  L168238
  Spy:  SPy1395
  Spn:  SP0978
  Sau:  SA0858
  Lin:  lin2293
  Bsu:  BS_yjbF
  Bha:  BH2857
_______

[S] COG4470 Uncharacterized protein conserved in bacteria
  Lla:  L183216
  Spy:  SPy1534
  Spn:  SP0767
  Sau:  SA0786
  Lin:  lin2501
  Bsu:  BS_yutD
  Bha:  BH3433
_______

[S] COG4471 Uncharacterized protein conserved in bacteria
  Lla:  L163307
  Spy:  SPy0397
  Spn:  SP0748
  Sau:  SA0970
  Lin:  lin2160
  Bsu:  BS_ylbG
  Bha:  BH2594
_______

[S] COG4472 Uncharacterized protein conserved in bacteria
  Cac:  CAC1679
  Lla:  L141485
  Spy:  SPy2114
  Spn:  SP0192
  Sau:  SA1445
  Lin:  lin1538
  Bha:  BH1268
_______

[U] COG4473 Predicted ABC-type exoprotein transport system, permease component
  Lla:  L57113
  Spy:  SPy1728
  Spn:  SP0523
  Sau:  SA1654
  Lin:  lin2317
  Bsu:  BS_ecsB BS_ythQ
  Bha:  BH1192
_______

[S] COG4474 Uncharacterized protein conserved in bacteria
  Lla:  L131937
  Spy:  SPy1647
  Spn:  SP0371
  Sau:  SA1280
  Lin:  lin2003
  Bsu:  BS_yoqJ BS_ypsA
  Bha:  BH1768
_______

[S] COG4475 Uncharacterized protein conserved in bacteria
  Lla:  L86338
  Spy:  SPy1898
  Spn:  SP0663
  Sau:  SA1916
  Bsu:  BS_ywlG
  Bha:  BH3766
_______

[S] COG4476 Uncharacterized protein conserved in bacteria
  Lla:  L133111
  Spy:  SPy1248
  Spn:  SP1404
  Sau:  SA0948
  Lin:  lin1050
  Bsu:  BS_yktA
  Bha:  BH2638
_______

[D] COG4477 Negative regulator of septation ring formation
  Lla:  L7722
  Spy:  SPy0728
  Spn:  SP0807
  Sau:  SA1539
  Lin:  lin1636
  Bsu:  BS_ytwP
  Bha:  BH3205
_______

[S] COG4478 Predicted membrane protein
  Cac:  CAC2705
  Lla:  L157321
  Spy:  SPy1044
  Spn:  SP1406
  Mpu:  MYPU_2420
_______

[S] COG4479 Uncharacterized protein conserved in bacteria
  Lla:  L67463
  Spy:  SPy0467
  Spn:  SP0947
  Sau:  SA1254
  Lin:  lin1971
  Bsu:  BS_yozE
_______

[S] COG4481 Uncharacterized protein conserved in bacteria
  Cac:  CAC3725
  Spy:  SPy0004
  Spn:  SP0003
  Sau:  SA0350
  Lin:  lin2921
  Bha:  BH4052
_______

[S] COG4483 Uncharacterized protein conserved in bacteria
  Lla:  L83865
  Spy:  SPy1530
  Spn:  SP0677
  Sau:  SA1378
  Lin:  lin1375
  Bsu:  BS_yqgQ
_______

[S] COG4485 Predicted membrane protein
  Lla:  L48341
  Spy:  SPy2211
  Spn:  SP2231
  Sau:  SA1085
  Bsu:  BS_yfhO
_______

[S] COG4487 Uncharacterized protein conserved in bacteria
  Spy:  SPy1252
  Spn:  SP1213
  Hpy:  HP1143
  jHp:  jhp1071
  Cje:  Cj0036
  Mlo:  mll6304 mll6306 mlr9300
  Uur:  UU367
  Mpn:  MPN161
  Mge:  MG148
_______

[R] COG4492 ACT domain-containing protein
  Fnu:  FN1487
  Cac:  CAC1234
  Sau:  SA1469
  Bsu:  BS_pheB
  Bha:  BH1214
_______

[S] COG4493 Uncharacterized protein conserved in bacteria
  Lla:  L195366
  Sau:  SA0957
  Lin:  lin1053
  Bsu:  BS_yktB
  Bha:  BH2637
_______

[S] COG4495 Uncharacterized protein conserved in bacteria
  Cac:  CAC1636 CAC3707 CAC3708
  Lla:  L152227
  Sau:  SA2371
  Bha:  BH0980 BH2522
_______

[S] COG4496 Uncharacterized protein conserved in bacteria
  Cac:  CAC2675
  Sau:  SA1723
  Lin:  lin1875
  Bsu:  BS_yerC
  Bha:  BH0639
  Xfa:  XF2221
_______

[S] COG4499 Predicted membrane protein
  Cac:  CAC3710
  Sau:  SA0275
  Lin:  lin0053
  Bsu:  BS_yukC
  Bha:  BH0974
_______

[S] COG4502 Uncharacterized protein conserved in bacteria
  Cac:  CAC1218
  Sau:  SA0680
  Bsu:  BS_yorS
_______

[S] COG4506 Uncharacterized protein conserved in bacteria
  Cac:  CAC2894
  Sau:  SA0563
  Lin:  lin2707
  Bsu:  BS_ywiB
  Bha:  BH3809
_______

[S] COG4508 Uncharacterized protein conserved in bacteria
  Cac:  CAC3542
  Bha:  BH3133
  Mpu:  MYPU_4570
_______

[S] COG4509 Uncharacterized protein conserved in bacteria
  Spy:  SPy0129
  Sau:  SA0982
  Lin:  lin2285
  Bha:  BH3294
_______

[OTK] COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
  Cac:  CAC0078
  Sau:  SA1842
  Lin:  lin0041
  Bha:  BH3475
_______

[S] COG4517 Uncharacterized protein conserved in bacteria
  Ype:  YPO3818
  Pae:  PA3979
  Xfa:  XF1055
_______

[S] COG4518 Mu-like prophage FluMu protein gp41
  Ecs:  ECs4981
  Vch:  VC1792
  Hin:  HI1513
_______

[S] COG4519 Uncharacterized protein conserved in bacteria
  Ype:  YPO3042
  Vch:  VC2149
  Pae:  PA2029
_______

[M] COG4520 Surface antigen
  Rso:  RSc2710
  Atu:  AGc1782
  Sme:  SMc00067
  Bme:  BMEI1335
  Mlo:  mlr7687
  Rpr:  RP833
  Rco:  RC1287
_______

[P] COG4521 ABC-type taurine transport system, periplasmic component
  Eco:  tauA
  EcZ:  ZtauA
  Ecs:  ECs0419
  Ype:  YPO0182
  Pae:  PA3938
  Sme:  SMb21526
  Mlo:  mlr4517
_______

[P] COG4525 ABC-type taurine transport system, ATPase component
  Eco:  tauB
  EcZ:  ZtauB
  Ecs:  ECs0420
  Ype:  YPO0183
  Pae:  PA3937
  Atu:  AGl926
  Sme:  SMb21527
  Mlo:  mlr4518
_______

[S] COG4529 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2084_1
  Mtu:  Rv3403c
  MtC:  MT3511
  Sau:  SA1590
  Eco:  ydhS
  EcZ:  Z2695
  Ecs:  ECs2375
  Atu:  AGl1841 AGpA769
  Sme:  SMb20991 SMb20992
  Bme:  BMEII0771
  Mlo:  mll4514 mlr5217
_______

[S] COG4530 Uncharacterized protein conserved in bacteria
  Atu:  AGl1500
  Sme:  SMc00332
  Bme:  BMEI1918
  Mlo:  mlr5215
  Ccr:  CC3590
_______

[P] COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin
  Eco:  znuA
  EcZ:  ZyebL
  Ecs:  ECs2567
  Ype:  YPO2061
  Sty:  STM1891
  Vch:  VC2081
  Pae:  PA5498
  Hin:  HI0119
  Pmu:  PM0926
  Atu:  AGc2805
  Sme:  SMc04245
  Bme:  BMEII0178
_______

[R] COG4533 ABC-type uncharacterized transport system, periplasmic component
  Dra:  DRB0042
  Lin:  lin2150
  Bsu:  BS_yhjP
  Bha:  BH1159
  Eco:  yabN ybaE
  EcZ:  ZyabN ZybaE
  Ecs:  ECs0074 ECs0499
  Ype:  YPO0524 YPO3149
  Sty:  STM0109 STM0456 STM2759 STM3860
  Vch:  VC1647 VCA0578
_______

[P] COG4535 Putative Mg2+ and Co2+ transporter CorC
  Eco:  ybeX
  EcZ:  ZybeX
  Ecs:  ECs0696
  Ype:  YPO2617
  Sty:  STM0667
  Buc:  BU443
  Vch:  VC0959
  Pae:  PA3983
  Hin:  HI0301
  Pmu:  PM1033
  Xfa:  XF0901
  Nme:  NMB0537
  NmA:  NMA0716
  Rso:  RSc0528
_______

[P] COG4536 Putative Mg2+ and Co2+ transporter CorB
  Sau:  SA0780
  Eco:  yfjDm
  EcZ:  ZyfjDm
  Ecs:  ECs3475
  Ype:  YPO3298
  Sty:  STM2679
  Vch:  VC0558
  Pae:  PA3748
  Hin:  HI0107
  Pmu:  PM1185
  Rso:  RSc2824
  Sme:  SMc00697
  Bme:  BMEI0044
  Mlo:  mll3569
  Ccr:  CC3017
  Rpr:  RP702
  Rco:  RC1079
_______

[U] COG4537 Competence protein ComGC
  Lla:  L0315
  Spy:  SPy0103
  Spn:  SP2051
  Sau:  SA1372
  Lin:  lin1382
  Bsu:  BS_comGC
  Bha:  BH2827
_______

[S] COG4538 Uncharacterized conserved protein
  Hbs:  VNG1917H
  Atu:  AGc1343
  Ccr:  CC1951
_______

[S] COG4539 Predicted membrane protein
  Sce:  YGL010w
  Spo:  SPAC16E8.02
  Pae:  PA0276
  Rso:  RSp0806
_______

[R] COG4540 Phage P2 baseplate assembly protein gpV
  Ype:  YPO1881
  Sty:  STM2710 STM4207
  Pae:  PA0616
  Xfa:  XF0719 XF2492
  Rso:  RSc1925
_______

[S] COG4541 Predicted membrane protein
  Rso:  RSp1375
  Atu:  AGc2002 AGc3746
  Sme:  SMc00560 SMc01883
  Bme:  BMEII0516
  Mlo:  msl1536 msl2426
_______

[Q] COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
  Cac:  CAC1371
  Lin:  lin1134
  Sty:  STM2058
  Mlo:  mll9228 mlr9540
_______

[S] COG4544 Uncharacterized conserved protein
  Atu:  AGl3170 AGpA143 AGpT172
  Sme:  SMa0888 SMc03790
  Bme:  BMEI1874
  Mlo:  mlr4426
  Ccr:  CC3213
_______

[O] COG4545 Glutaredoxin-related protein
  Fnu:  FN1077
  Hin:  HI0926
  Pmu:  PM1099
  Tpa:  TP0072
_______

[H] COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase)
  Ype:  YPMT1.87
  Atu:  AGl2410
  Sme:  SMc00701
  Bme:  BMEI0050
  Mlo:  mll3561
  Ccr:  CC0672
_______

[P] COG4548 Nitric oxide reductase activation protein
  Sau:  SA1240
  Bsu:  BS_yojO
  Pae:  PA0525
  Atu:  AGl961
  Sme:  SMa1269
  Bme:  BMEII0996
_______

[S] COG4549 Uncharacterized protein conserved in bacteria
  Lin:  lin2167
  Bsu:  BS_ycnI
  Atu:  AGc2707_1
  Sme:  SMa1200 SMc01242_1
  Bme:  BMEI1890_1
  Mlo:  mll3324
_______

[S] COG4550 Predicted membrane protein
  Lla:  L79329
  Spy:  SPy2149
  Sau:  SA1135
  Lin:  lin1439
  Bsu:  BS_ymcA
  Bha:  BH2371
_______

[R] COG4551 Predicted protein tyrosine phosphatase
  Nos:  all3436
  Pae:  PA1506
  Rso:  RSc0006
  Mlo:  mlr4629
_______

[R] COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
  Fnu:  FN1041
  Mtu:  Rv2416c
  MtC:  MT2489
  Lla:  L174946
  Bha:  BH1812
  Nos:  alr1537
_______

[I] COG4553 Poly-beta-hydroxyalkanoate depolymerase
  Rso:  RSc1008
  Atu:  AGc24
  Sme:  SMc02770
  Mlo:  mll4552
  Ccr:  CC0250
  Rpr:  RP681
  Rco:  RC1042 RC1043
_______

[CP] COG4555 ABC-type Na+ transport system, ATPase component
  Tma:  TM1327
  Dra:  DR0927
  Cac:  CAC3551
  Bsu:  BS_natA
  Xfa:  XF2329
  Tpa:  TP0881
_______

[P] COG4558 ABC-type hemin transport system, periplasmic component
  Dra:  DRB0014
  Cgl:  Cgl0385
  EcZ:  ZchuT
  Ecs:  ECs4382
  Ype:  YPO0281
  Vch:  VCA0913
  Pae:  PA4708
  Pmu:  PM1078
  Atu:  AGc4467
  Sme:  SMc01512
  Mlo:  mll1151
_______

[P] COG4559 ABC-type hemin transport system, ATPase component
  Dra:  DRB0016
  Cgl:  Cgl0387
  EcZ:  Z4919
  Ecs:  ECs4387
  Ype:  YPO0279
  Vch:  VCA0915
  Pae:  PA4706
  Atu:  AGc4465
  Sme:  SMc01510
  Mlo:  mll1149
_______

[T] COG4564 Signal transduction histidine kinase
  Vch:  VC1276
  Rso:  RSc0021
  Atu:  AGpA381
  Bme:  BMEI1583
_______

[KT] COG4565 Response regulator of citrate/malate metabolism
  Cgl:  Cgl0069
  Spy:  SPy1106
  Bsu:  BS_citT BS_ydbG BS_yufM
  Bha:  BH0398 BH2751 BH3838
  Eco:  citB dcuR
  EcZ:  ZcitB ZyjdG
  Ecs:  ECs0659 ECs5106
  Sty:  STM0052 STM0626 STM4303
  Vch:  VC0790 VC1604
_______

[T] COG4566 Response regulator
  Sty:  STM1387
  Pae:  PA4196
  Pmu:  PM0725
  Rso:  RSc1597
  Atu:  AGc2066 AGl1128 AGl153gl_2 AGl218
  Sme:  SMa0759 SMa0940 SMa1227 SMa1686 SMb20869
  Bme:  BMEII0051
  Mlo:  mll0983 mll0990 mll6606
  Ccr:  CC0758
_______

[TK] COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
  Pae:  PA4493
  Xfa:  XF2578
  Rso:  RSc0040
  Atu:  AGc82
  Sme:  SMc02584
  Bme:  BMEI1811
  Mlo:  mlr5308 mlr6853
  Ccr:  CC0247 CC1767
_______

[K] COG4568 Transcriptional antiterminator
  Eco:  rof
  EcZ:  ZyaeO
  Ecs:  ECs0191
  Ype:  YPO1064
  Sty:  STM0237
  Vch:  VCA0948
  Pae:  PA0939
_______

[Q] COG4569 Acetaldehyde dehydrogenase (acetylating)
  Mtu:  Rv3535c
  MtC:  MT3639
  Eco:  mhpF
  EcZ:  ZmhpF
  Ecs:  ECs0406
  Rso:  RSp0894
_______

[L] COG4570 Holliday junction resolvase
  Aae:  aq_1953
  Lla:  L44970
  Spy:  SPy0673
  Sau:  SA1789
  Lin:  lin1248 lin1749
  Bsu:  BS_yqaN
  Eco:  rus
  EcZ:  Z1344 Z1785 Z2057 Z2101 Z3115 Z6061 Zrus
  Ecs:  ECs1083 ECs1523 ECs1619 ECs1777 ECs2194 ECs2268 ECs2751
_______

[M] COG4571 Outer membrane protease
  Eco:  ompT
  EcZ:  Z1931
  Ecs:  ECs1663
  Ype:  YPO1231 YPPCP1.07
  Sty:  STM2395
  Atu:  AGc2108
  Mlo:  mlr6132
_______

[R] COG4572 Putative cation transport regulator
  Nos:  asl3264 asr4093
  Eco:  chaB
  EcZ:  ZchaB
  Ecs:  ECs1722
  Sty:  STM1770
  Rco:  RC0231
_______

[G] COG4573 Predicted tagatose 6-phosphate kinase
  Eco:  agaZ gatZ
  EcZ:  ZagaZ ZgatZ
  Ecs:  ECs2898 ECs4010
  Ype:  YPO0832
  Sty:  STM3257
  Rso:  RSc2145
  Atu:  AGl3286
  Sme:  SMb21373
  Mlo:  mll7215
_______

[R] COG4574 Serine protease inhibitor ecotin
  Eco:  eco
  EcZ:  Zeco
  Ecs:  ECs3098
  Ype:  YPO1211
  Sty:  STM2262
  Pae:  PA2755
  Rco:  RC1017
_______

[S] COG4575 Uncharacterized conserved protein
  Eco:  elaB ygaM yqjD
  EcZ:  ZelaB ZygaM ZyqjD
  Ecs:  ECs3154 ECs3533 ECs3980
  Ype:  YPO0570 YPO2531
  Sty:  STM2311 STM2802 STM3229
  Pae:  PA1323 PA2754 PA3040
  Pmu:  PM0612
  Rso:  RSc0753
_______

[QC] COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein
  Fnu:  FN0087
  Lin:  lin1127 lin1148
  Syn:  sll1030
  Nos:  all0866
  Eco:  cchB
  EcZ:  ZcchB
  Ecs:  ECs3318
  Sty:  STM2049 STM2464
_______

[QC] COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein
  Fnu:  FN0082 FN0083
  Lin:  lin1107 lin1115 lin1122 lin1123 lin1142 lin1144 lin1149
  Syn:  sll1028 sll1029 slr0436 slr1838 slr1839
  Nos:  all0863 all0867 all0868 alr0317 alr0318
  Eco:  cchA eutK
  EcZ:  Z3703 ZcchA
  Ecs:  ECs3309 ECs3319
  Sty:  STM2038 STM2045 STM2046 STM2054 STM2455 STM2465
_______

[K] COG4578 Glucitol operon activator
  Cgl:  Cgl2448
  Mtu:  Rv1343c
  MtC:  MT1384
  Mle:  ML1177
  Bha:  BH0770
  Eco:  gutM
  EcZ:  ZgutM
  Ecs:  ECs3562
  Sty:  STM2836
  Pmu:  PM1967
  Mlo:  mll3616
_______

[T] COG4579 Isocitrate dehydrogenase kinase/phosphatase
  Eco:  aceK
  EcZ:  ZaceK
  Ecs:  ECs4934
  Ype:  YPO3724
  Sty:  STM4185
  Pae:  PA1376
  Rso:  RSc0278
_______

[G] COG4580 Maltoporin (phage lambda and maltose receptor)
  Eco:  lamB yieC
  EcZ:  ZlamB
  Ecs:  ECs5019
  Ype:  YPO0850 YPO3711
  Sty:  STM4231
  Vch:  VCA1028
  Rso:  RSp1283
_______

[L] COG4581 Superfamily II RNA helicase
  Sce:  YJL050w YLR398c
  Spo:  SPAC17H9.02 SPAC694.02 SPAC6F12.16c SPCC550.03c
  Ecu:  ECU04g0910 ECU04g1290 ECU05g0940
  Cgl:  Cgl1453 Cgl1878
  Mtu:  Rv2092c
  MtC:  MT2153
  Mle:  ML1333
  Syn:  slr0451
  Nos:  alr0489
_______

[S] COG4582 Uncharacterized protein conserved in bacteria
  Eco:  yacF
  EcZ:  ZyacF
  Ecs:  ECs0106
  Ype:  YPO3431
  Sty:  STM0139
  Vch:  VC2428
  Rso:  RSc2829
_______

[E] COG4583 Sarcosine oxidase gamma subunit
  Pae:  PA5419
  Rso:  RSc1104 RSp0049
  Atu:  AGl1101 AGl1279 AGl1572
  Sme:  SMc02605 SMc03930
  Bme:  BMEI1719
  Mlo:  mll3107 mll6237 mll7303 mlr1276
_______

[L] COG4584 Transposase and inactivated derivatives
  Mac:  MA0005 MA1050 MA1051 MA1057 MA1534 MA1579 MA1882
        MA2027 MA2080 MA2202 MA2579 MA2738 MA2822 MA3124
        MA3326 MA3354 MA3434 MA3506 MA3759 MA4132 MA4186
        MA4530
  Mtu:  Rv2943 Rv3428c Rv3636 Rv3637
  MtC:  MT3015
  Sau:  SA1624 SA2014 SAS069 SAS070
  Lin:  pli0003
  Bha:  BH3965 BH3998
  EcZ:  Z4315_1
  Ecs:  ECs3846_1
  Ype:  YPCD1.01 YPCD1.97c YPMT1.01 YPMT1.58c YPO0031 YPO0097 YPO0171
        YPO0249 YPO0386 YPO0528 YPO0567 YPO0637 YPO0780 YPO0826
        YPO0924 YPO1013 YPO1086 YPO1132 YPO1338 YPO1427 YPO1520
        YPO1623 YPO1692 YPO1729 YPO1750 YPO1900 YPO1968 YPO2026
        YPO2085 YPO2178 YPO2365 YPO2396 YPO2516 YPO2643 YPO2721
        YPO2808 YPO2932 YPO3209 YPO3251 YPO3282 YPO3434 YPO3542
        YPO3591 YPO3701 YPO3756 YPO3774 YPO4010 YPPCP1.01
  Rso:  RSc0247 RSc2333 RSp0451 RSp0952
  Atu:  AGl49 AGl6 AGpTbx53
  Sme:  SMa0779 SMa0787 SMa1070
  Mlo:  mll5960 mll6047 mll6051
_______

[T] COG4585 Signal transduction histidine kinase
  Dra:  DR0577 DR1227_2 DR1556 DRA0009
  Cac:  CAC0239 CAC0864 CAC1454 CAC2253 CAC2940 CAC3430
  Cgl:  Cgl0594 Cgl0924 Cgl1964 Cgl2706 Cgl2871
  Mtu:  Rv0845 Rv2027c_2 Rv3132c_2
  MtC:  MT0867 MT2086_2 MT3218_2
  Lla:  L0126
  Spy:  SPy1622
  Spn:  SP0386 SP2001
  Sau:  SA1158 SA1667_2 SA1701 SA2180
  Lin:  lin1020
  Bsu:  BS_comP BS_degS BS_ydfH BS_yfiJ BS_yhcY_2 BS_yocF BS_yvfT
        BS_yvqE BS_yxjM
  Bha:  BH0582 BH0784 BH1050 BH1199 BH2096 BH2214_2 BH3629
  Syn:  slr0311_3
  Nos:  all4636 alr2137_3
  Pae:  PA0600_3 PA1979
  Rso:  RSc0191_2 RSc0289_2 RSc2311_2 RSc3160
  Atu:  AGl1636
  Sme:  SMa0204 SMb20077 SMb20467 SMb21519
  Mlo:  mll4568
  Ccr:  CC1149
_______

[R] COG4586 ABC-type uncharacterized transport system, ATPase component
  Sce:  YFL028c
  Spo:  SPAC20G4.01
  Fnu:  FN0880
  Dra:  DR0205 DR1581
  Spy:  SPy0518
  Spn:  SP0636
  Syn:  slr1901
  Nos:  alr0190
_______

[R] COG4587 ABC-type uncharacterized transport system, permease component
  Fnu:  FN0879
  Dra:  DR0203 DR1582
  Spy:  SPy0519
  Spn:  SP0637
  Syn:  slr1174
  Nos:  alr0191
_______

[R] COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain
  EcZ:  Z2053
  Ecs:  ECs1772
  Vch:  VC0841
  Cje:  Cj0289c Cj0778
  Sme:  SMc02156
_______

[R] COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
  Fnu:  FN1308
  Eco:  ynbB
  EcZ:  Z2318
  Ecs:  ECs2011
  Ype:  YPO2816
  Vch:  VC1936
  Pae:  PA2536
  Pmu:  PM2002
  Sme:  SMc02157
_______

[R] COG4590 ABC-type uncharacterized transport system, permease component
  Ype:  YPO2835
  Vch:  VC0724
  Pae:  PA5368
_______

[M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component
  Mac:  MA1674 MA2489 MA2490 MA3247
  Aae:  aq_1585 aq_296
  Fnu:  FN0581
  Dra:  DR0487
  Cac:  CAC0244
  Eco:  lolC lolE
  EcZ:  Z1554 ZycfU ZycfW
  Ecs:  ECs1294 ECs1494 ECs1496
  Ype:  YPO1626 YPO1628
  Sty:  STM1217 STM1219
  Buc:  BU295
  Vch:  VC1882 VC1884 VCA0854
  Pae:  PA2986 PA2988
  Hin:  HI1548 HI1555
  Pmu:  PM0560 PM0562
  Xfa:  XF1076
  Nme:  NMB1235
  NmA:  NMA1403
  Rso:  RSc1117
  Hpy:  HP0787
  jHp:  jhp0724
  Cje:  Cj0941c
  Atu:  AGc2376
  Sme:  SMb20369 SMc01935
  Bme:  BMEI1139
  Mlo:  mll1342
  Ccr:  CC0931 CC1930
  Rpr:  RP699
  Rco:  RC1076
  Tpa:  TP0580 TP0582
  Bbu:  BB0078 BB0079 BB0081 BBJ27
_______

[P] COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component
  Eco:  fepB
  EcZ:  ZfepB
  Ecs:  ECs0631
  Ype:  YPO0701
  Sty:  STM0594
  Vch:  VC0776
  Pae:  PA4159
_______

[P] COG4594 ABC-type Fe3+-citrate transport system, periplasmic component
  Sau:  SA0891 SA1979
  Bsu:  BS_yfmC BS_yhfQ
  Eco:  fecB
  Pmu:  PM0131
_______

[E] COG4597 ABC-type amino acid transport system, permease component
  Nos:  alr4165
  Eco:  yhdX
  EcZ:  ZyhdX
  Ecs:  ECs4142
  Vch:  VC1361
  Atu:  AGc2907
  Sme:  SMc02119
  Bme:  BMEI1210
  Mlo:  mlr8151
_______

[E] COG4598 ABC-type histidine transport system, ATPase component
  Eco:  hisP
  EcZ:  ZhisP
  Ecs:  ECs3190
  Ype:  YPO2777
  Sty:  STM2351
  Vch:  VC1864
  Pae:  PA0892 PA2926 PA5152
  Atu:  AGc4296 AGpT69
  Sme:  SMc02260
  Mlo:  mll5204
_______

[R] COG4603 ABC-type uncharacterized transport system, permease component
  Afu:  AF0888
  Hbs:  VNG0898G
  Pho:  PH1712
  Pab:  PAB0304
  Pya:  PAE3119 PAE3412
  Ape:  APE0065 APE2587
  Tma:  TM0104
  Dra:  DR0250_2
  Cac:  CAC0704
  Lla:  L166804
  Spy:  SPy1226
  Spn:  SP0847
  Lin:  lin1427
  Bsu:  BS_yufP
  Nos:  alr5367
  Pae:  PA0137
  Rso:  RSc2174
  Atu:  AGc205 AGc3295
  Sme:  SMa1513 SMa2125 SMa2367 SMb20126 SMc00243 SMc04126
  Bme:  BMEII0086 BMEII0699 BMEII0700
  Mlo:  mll0503 mll4175 mlr3155 mlr6803 mlr7062
  Tpa:  TP0301 TP0322
  Bbu:  BB0317 BB0678
  Uur:  UU014_1
  Mpu:  MYPU_6180
  Mpn:  MPN259
  Mge:  MG120
_______

[P] COG4604 ABC-type enterochelin transport system, ATPase component
  Cgl:  Cgl0790
  Spn:  SP1871
  Sau:  SA0690
  Bsu:  BS_yclP
  Bha:  BH1027
  Ype:  YPO4025
  Vch:  VCA0230
  Nme:  NMB1993
  NmA:  NMA0448
  Cje:  Cj1354
  Atu:  AGc4492
  Bme:  BMEII0604
_______

[P] COG4605 ABC-type enterochelin transport system, permease component
  Cgl:  Cgl0789
  Spn:  SP1870
  Sau:  SA0689
  Bsu:  BS_yclO
  Bha:  BH1026
  Ype:  YPO4024
  Vch:  VCA0229
  Nme:  NMB1991
  NmA:  NMA0450
  Cje:  Cj1353
  Atu:  AGc4491
  Bme:  BMEII0605
_______

[P] COG4606 ABC-type enterochelin transport system, permease component
  Cgl:  Cgl0788
  Spn:  SP1869
  Sau:  SA0688
  Bsu:  BS_yclN
  Bha:  BH1025
  Ype:  YPO4023
  Vch:  VCA0228
  Nme:  NMB1990
  NmA:  NMA0451
  Cje:  Cj1352
  Atu:  AGc4489
  Bme:  BMEII0606
_______

[P] COG4607 ABC-type enterochelin transport system, periplasmic component
  Cgl:  Cgl0787
  Spn:  SP1872
  Sau:  SA0691
  Bsu:  BS_yclQ
  Bha:  BH1028
  Ype:  YPO4022
  Vch:  VCA0227
  Nme:  NMB1880 NMB1989
  NmA:  NMA0452 NMA0577
  Cje:  Cj1355
  Atu:  AGc4488
  Bme:  BMEII0607
_______

[E] COG4608 ABC-type oligopeptide transport system, ATPase component
  Afu:  AF1771
  Hbs:  VNG2343G VNG2365G VNG2526G_2
  Mac:  MA0298 MA0697 MA0878 MA1244 MA2474 MA2478 MA3047
        MA3456 MA3465 MA3909 MA4253 MA4597
  Tac:  Ta0266 Ta1326
  Tvo:  TVN1328
  Pho:  PH0507 PH0811 PH1413 PH1958
  Pab:  PAB0095 PAB0631 PAB1197 PAB1347 PAB1875
  Pya:  PAE1296 PAE3316
  Sso:  SSO1277 SSO1279 SSO1281 SSO2615 SSO2672 SSO3045
  Ape:  APE0300 APE1402 APE1576 APE2263
  Aae:  aq_2122
  Tma:  TM0027 TM0057 TM0075 TM0304 TM0500 TM0530 TM1063
        TM1151 TM1196 TM1219 TM1750
  Fnu:  FN0400 FN1109 FN1363 FN1525 FN1648
  Dra:  DR1567
  Cac:  CAC0180 CAC3183 CAC3628 CAC3635 CAC3641
  Cgl:  Cgl2602
  Lla:  L150031 L92192
  Spy:  SPy0297
  Spn:  SP1887
  Sau:  SA0848 SA0852 SA1211
  Lin:  lin2296
  Bsu:  BS_appF BS_oppF BS_ykfD
  Bha:  BH0027 BH0351 BH0571 BH1800 BH3639 BH3645
  Eco:  dppF oppF
  EcZ:  ZdppF ZoppF
  Ecs:  ECs1747 ECs4420
  Ype:  YPO2186 YPO3999
  Sty:  STM1742 STM3626
  Vch:  VC0616 VC1095
  Pae:  PA4506
  Hin:  HI1120 HI1184
  Pmu:  PM0240 PM1906
  Rso:  RSc1885 RSc2866
  Hpy:  HP0302
  jHp:  jhp0287
  Cje:  Cj1580c
  Atu:  AGc2214 AGl1474 AGl2779 AGl3198 AGl359 AGpA367 AGpT260
  Sme:  SMa0110 SMa1370 SMa1646 SMa2079 SMb20479 SMc00790 SMc02424
        SMc03126
  Bme:  BMEI0438 BMEII0199 BMEII0205 BMEII0223 BMEII0288 BMEII0508 BMEII0864
  Mlo:  mll0595 mll5436 mll9145 mlr3401 mlr5420 mlr5895 mlr6086
        mlr9271
  Ctr:  CT689
  Cpn:  CPn0683
  Bbu:  BB0335
  Mpu:  MYPU_2560_2 MYPU_2860_1 MYPU_2860_3
  Mpn:  MPN218_1 MPN218_3
  Mge:  MG080_1 MG080_3
_______

[QP] COG4615 ABC-type siderophore export system, fused ATPase and permease components
  Eco:  yojI
  EcZ:  ZyojI
  Ecs:  ECs3100
  Sty:  STM2263
  Pae:  PA2397
  Rso:  RSp0638
  Cje:  Cj1587c
_______

[R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components
  Aae:  aq_1097
  Ype:  YPO3920
  Pae:  PA1246 PA3406
  Atu:  AGc4902 AGl2880 AGl3000 AGl908
  Sme:  SMb21316 SMb21466 SMc03147 SMc04207
  Mlo:  mll1027 mll2583 mlr6771
  Ccr:  CC1008
  Rpr:  RP315
  Rco:  RC0429
_______

[R] COG4619 ABC-type uncharacterized transport system, ATPase component
  Sau:  SA2243
  Eco:  ybbL
  EcZ:  ZybbL
  Ecs:  ECs0553
  Sty:  STM0502
  Rso:  RSc0749
_______

[M] COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
  Eco:  yfhD
  EcZ:  ZyfhD
  Ecs:  ECs3424
  Ype:  YPO2922
  Sty:  STM2567
  Vch:  VC0866
  Pae:  PA2865 PA3764
  Hin:  HI0232
  Pmu:  PM0045
_______

[R] COG4624 Iron only hydrogenase large subunit, C-terminal domain
  Sce:  YNL240c
  Spo:  SPCC1450.10c
  Ecu:  ECU05g0970
  Tma:  TM0201_2 TM1421 TM1426_2
  Cac:  CAC0028_2 CAC3230
_______

[S] COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain
  Fnu:  FN1426_2 FN1950_2
  Pae:  PA3535_2
  Xfa:  XF0267_2 XF1026_2 XF1851_3
  Rso:  RSc3162_2
  Atu:  AGl3085
  Mlo:  mll0950_2 mll1534 mlr1935
_______

[R] COG4626 Phage terminase-like protein, large subunit
  Cac:  CAC1895
  Lla:  L37002 L52677 L64491
  Sau:  SA1777
  Lin:  lin2579
  Eco:  ymfN_2
  EcZ:  Z1358 Z1359 Z1803 Z1854 Z3332 Z6045
  Ecs:  ECs1542 ECs1598 ECs1792 ECs1971 ECs2251
  Mlo:  mlr8521
_______

[S] COG4627 Uncharacterized protein conserved in bacteria
  Dra:  DR1675
  Bha:  BH1053
  Syn:  slr1815
  Nos:  alr0557_3
_______

[S] COG4628 Uncharacterized conserved protein
  Dra:  DR0127_1
  Ype:  YPO1157
  Vch:  VC1100 VC1816
_______

[F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A
  Dra:  DRA0177
  Pae:  PA1524
  Rso:  RSc2095
  Atu:  AGc4202
  Sme:  SMb21011 SMb21286
  Bme:  BMEI1576
  Mlo:  mlr5134
_______

[F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B
  Dra:  DRA0178
  Pae:  PA1523
  Rso:  RSc2096
  Atu:  AGc4204
  Sme:  SMb20846 SMb21287
  Bme:  BMEI1575
  Mlo:  mlr5135
  Ccr:  CC2618
_______

[G] COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
  Cac:  CAC2630 CAC2633
  Lla:  L135727
  Bsu:  BS_yomE
_______

[S] COG4633 Uncharacterized protein conserved in bacteria
  Cac:  CAC1554_3
  Spn:  SP0728
  Nos:  alr1628 alr7636
_______

[S] COG4634 Uncharacterized protein conserved in bacteria
  Syn:  sll1400 slr1767
  Nos:  alr1560 alr2173 asr2959 asr3961
  Xfa:  XF2029
_______

[CH] COG4635 Flavodoxin
  Mac:  MA2078
  Lla:  L115265
  Eco:  hemG
  EcZ:  ZhemG
  Ecs:  ECs4778
  Ype:  YPO3761
  Sty:  STM3987
  Vch:  VC2755
  Pmu:  PM1499
  Mlo:  mlr4722
_______

[S] COG4636 Uncharacterized protein conserved in cyanobacteria
  Aae:  aq_037 aq_1194
  Dra:  DR0376 DR0469 DR1722
  Syn:  sll0007 sll0198 sll0296 sll0488 sll0740 sll0888 sll0913
        sll0925 sll0995 sll1072 sll1186 sll1222 sll1232 sll1250
        sll1355 sll1461 sll1609 sll1938 sll1956 slr0300 slr0445
        slr0885 slr0976 slr0981 slr1081 slr1083 slr1095 slr1290
        slr1315 slr1378 slr1612 slr1613 slr1752 slr2038 slr2084
        slr2092 ssl2471 ssl3573
  Nos:  all0123 all0133 all0134 all1043 all1445 all1618 all1889
        all2103 all2275 all2399 all2438 all2905 all3435 all3650
        all4041 all4142 all4143 all4364 all4679 all4844 all5020
        all5060 all5082 all5267 all7113 all7173 alr0279 alr0506
        alr0559 alr1074 alr1224 alr1401 alr1444 alr1460 alr1536
        alr1821 alr1923 alr2537 alr2809 alr2988 alr3200 alr3228
        alr3718 alr3737 alr3824 alr3907 alr3958 alr4405 alr4484
        alr4599 alr4852 alr4854 alr4912 alr4913 alr5021 alr5051
        alr5220 alr7102 asl1446 asr0179 asr4228
  Ccr:  CC2914
_______

[R] COG4637 Predicted ATPase
  Nos:  all3132 all8080 alr0507
  Pae:  PA0787
  Sme:  SMc02491
_______

[PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
  Tma:  TM1284 TM1340
  Cgl:  Cgl2332 Cgl2352
  Mtu:  Rv3161c Rv3526
  MtC:  MT3250
  Syn:  sll0264 sll1297 sll1849 sll1869 slr1747
  Nos:  all2097 all3866 all4558 all7348 alr4354 alr5007
  Eco:  hcaA1 yeaW
  EcZ:  ZhcaA1 ZyeaW
  Ecs:  ECs2511 ECs3404
  Ype:  YPO2493
  Pae:  PA2083 PA2512 PA2518 PA3500 PA4904 PA5410
  Rso:  RSc1090 RSc2224 RSp0062 RSp0222
  Atu:  AGc1320
  Sme:  SMa0751 SMa1500_1 SMa1501 SMa1503 SMa2117_1 SMa2119 SMa2121
        SMa2131 SMc00982
  Bme:  BMEI0549
  Mlo:  mll5101 mlr1312 mlr3662
  Ccr:  CC0737 CC2393 CC3122
_______

[R] COG4639 Predicted kinase
  Fnu:  FN1603_1
  Dra:  DR2249_1 DRB0098_2
  Cac:  CAC0753_2
  Nos:  all4644 alr3731_1
  Cje:  Cj0184c_1
_______

[S] COG4640 Predicted membrane protein
  Cac:  CAC3234 CAC3235
  Sau:  SA2146
  Bsu:  BS_yvbJ
_______

[S] COG4641 Uncharacterized protein conserved in bacteria
  Cac:  CAC2177 CAC2193
  Bsu:  BS_cgeB BS_ykvP_1
  Bha:  BH2839
  Sme:  SMb20240 SMb20241 SMb20242
_______

[S] COG4642 Uncharacterized protein conserved in bacteria
  Spy:  SPy0040
  Spn:  SP2027
  Syn:  slr1485
  Pae:  PA4016_1
  Nme:  NMB0850
  NmA:  NMA1061
  Mlo:  mll3305
_______

[S] COG4643 Uncharacterized protein conserved in bacteria
  EcZ:  Z0339_1
  Ecs:  ECs0303_1
  Ype:  YPO0880_1 YPO1090
  Sty:  STM0901
  Xfa:  XF2025 XF2061_2
  Rso:  RSc1865_1 RSc2483_1
_______

[L] COG4644 Transposase and inactivated derivatives, TnpA family
  Dra:  DRC0017
  Cac:  CAP0093 CAP0094
  Ype:  YPCD1.90c YPO4051
  Atu:  AGpA47 AGpA506
  Mlo:  mll5813 mll6363 mlr6323 mlr9023 msr6321
_______

[S] COG4645 Uncharacterized protein conserved in bacteria
  Vch:  VC1941
  Atu:  AGl2267
  Sme:  SMc04381
  Bme:  BMEI0330
  Mlo:  mlr8375
_______

[KL] COG4646 DNA methylase
  jHp:  jhp0928_2
  Atu:  AGpT188_2
  Mlo:  mll9319 mll9333_2
_______

[Q] COG4647 Acetone carboxylase, gamma subunit
  Hpy:  HP0697
  jHp:  jhp0631
  Sme:  SMb20408
  Mlo:  mlr5247
_______

[S] COG4648 Predicted membrane protein
  EcZ:  Z4855
  Ecs:  ECs4330
  NmA:  NMA1954
  Rso:  RSc0433 RSp0368
_______

[S] COG4649 Uncharacterized protein conserved in bacteria
  Atu:  AGc4182
  Sme:  SMb20996
  Bme:  BMEI1551
  Mlo:  mlr7403
  Ccr:  CC1652
_______

[KT] COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain
  Eco:  rtcR
  EcZ:  ZrtcR
  Ecs:  ECs4265
  Sty:  STM3522
  Pae:  PA4581
  Rso:  RSc0222
_______

[P] COG4651 Kef-type K+ transport system, predicted NAD-binding component
  Eco:  ybaL_1
  EcZ:  ZybaL_1
  Ecs:  ECs0531_1
  Ype:  YPO3094_1
  Sty:  STM0492_1
  Vch:  VC0992_1
  Pae:  PA5518_1
  Xfa:  XF2140_1
  Rso:  RSp1496
  Sme:  SMa1600_1
  Bme:  BMEI0679_1
  Mlo:  mlr3234_1
_______

[S] COG4652 Uncharacterized protein conserved in bacteria
  Lla:  L13272 L80344
  Spn:  SP0686 SP1956 SP1988
  Sau:  SA0886 SAP020
  Bha:  BH0280
_______

[R] COG4653 Predicted phage phi-C31 gp36 major capsid-like protein
  Mtu:  Rv1576c Rv2650c
  MtC:  MT2727 MT3573.11 MT3573.12 MT3573.9
  EcZ:  Z1847
  Ecs:  ECs1590
  Rso:  RSc1684
  Atu:  AGc1748
  Mlo:  mlr8524
  Ccr:  CC2783
_______

[C] COG4654 Cytochrome c551/c552
  Aae:  aq_1550 aq_792
  Pae:  PA0518
  Rso:  RSc0629 RSc3260
_______

[S] COG4655 Predicted membrane protein
  Pae:  PA4297
  Rso:  RSp1080
  Atu:  AGc2962
  Sme:  SMc00158
  Mlo:  mll7595
_______

[C] COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
  Mac:  MA0659
  Tma:  TM0244
  Fnu:  FN1596
  Lin:  lin1106
  Eco:  ydgN
  EcZ:  Z2636
  Ecs:  ECs2338
  Ype:  YPO2244
  Sty:  STM1457 STM2053
  Buc:  BU115
  Vch:  VC1015
  Pae:  PA3491
  Hin:  HI1685
  Pmu:  PM0385
  Tpa:  TP0152
  Bbu:  BB0072
_______

[C] COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
  Mac:  MA0663
  Tma:  TM0248
  Fnu:  FN1592
  Eco:  ydgL
  EcZ:  Z2633
  Ecs:  ECs2336
  Ype:  YPO2246
  Sty:  STM1459
  Buc:  BU113
  Vch:  VC1017
  Pae:  PA3489
  Hin:  HI1683
  Pmu:  PM0387
_______

[C] COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
  Mac:  MA0660
  Tma:  TM0245
  Fnu:  FN1595
  Eco:  ydgO
  EcZ:  ZydgO
  Ecs:  ECs2339
  Ype:  YPO2242
  Sty:  STM1456
  Buc:  BU116
  Vch:  VC1014
  Pae:  PA3492
  Hin:  HI1686
  Pmu:  PM0384
  Tpa:  TP0151
_______

[C] COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
  Mac:  MA0661
  Tma:  TM0246
  Fnu:  FN1594
  Eco:  ydgP
  EcZ:  Z2640
  Ecs:  ECs2340
  Ype:  YPO2241
  Sty:  STM1455
  Buc:  BU117
  Vch:  VC1013
  Pae:  PA3493
  Hin:  HI1687
  Pmu:  PM0383
_______

[C] COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
  Mac:  MA0662
  Tma:  TM0247
  Fnu:  FN1593
  Eco:  ydgQ
  EcZ:  ZydgQ
  Ecs:  ECs2341
  Ype:  YPO2240
  Sty:  STM1454
  Buc:  BU118
  Vch:  VC1012
  Pae:  PA3494
  Hin:  HI1688
  Pmu:  PM0382
_______

[H] COG4662 ABC-type tungstate transport system, periplasmic component
  Mth:  MTH478
  Pya:  PAE0022
  Vch:  VC1524
  Rso:  RSc2631
  Cje:  Cj1539c
_______

[Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
  Syn:  slr1962
  Nos:  all3028
  Vch:  VC0488 VC1273
  Atu:  AGc426 AGl2908 AGpA385
  Sme:  SMc04251 SMc04289
  Bme:  BMEI1579
  Mlo:  mlr5166
_______

[Q] COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component
  Syn:  sll1103
  Nos:  alr3027
  Vch:  VC1275
  Atu:  AGl2910 AGpA387
  Sme:  SMc04249 SMc04283
  Bme:  BMEI1580
  Mlo:  mll5170
_______

[Q] COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component
  Syn:  sll1102
  Nos:  alr3026
  Vch:  VC1274
  Atu:  AGl2913 AGpA389
  Sme:  SMc04248 SMc04287
  Bme:  BMEI1581
  Mlo:  mll5171
_______

[R] COG4666 TRAP-type uncharacterized transport system, fused permease components
  Afu:  AF0466 AF0636 AF0989
  Hbs:  VNG0537C
  Ape:  APE2133 APE2542
  Dra:  DR1650 DR1653
  Bha:  BH0602 BH2938 BH2945
  Vch:  VC0429 VCA0146
  Pae:  PA5544
  Pmu:  PM0473 PM1580
  Sme:  SMb20291
  Bme:  BMEI0797
_______

[R] COG4667 Predicted esterase of the alpha-beta hydrolase superfamily
  Fnu:  FN0508
  Cac:  CAC2424
  Cgl:  Cgl1119
  Eco:  yjjU
  EcZ:  ZyjjU
  Ecs:  ECs5335
  Ype:  YPO0433
  Sty:  STM4563
  Vch:  VC2009
  Pmu:  PM0638
_______

[G] COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain
  Dra:  DRB0075_1
  Cac:  CAC0156
  Lla:  L32907
  Spn:  SP0396
  Sau:  SA1962
  Lin:  lin0425_2
  Bsu:  BS_mtlA_2
  Bha:  BH3852
  Eco:  fruB_1 mtlA_2
  EcZ:  ZfruB_1 ZmtlA_2
  Ecs:  ECs3061_1 ECs4475_2
  Ype:  YPO1298_1 YPO4068_2
  Sty:  STM2206_1 STM3256_1 STM3685_2 STM4448_2
  Buc:  BU572_2
  Vch:  VCA0518_1 VCA1045_2
  Pae:  PA3562_1
  Hin:  HI0448_1
  Pmu:  PM1061_2 PM1797_1
  Rso:  RSc2861_1
  Mpn:  MPN653
_______

[U] COG4669 Type III secretory pathway, lipoprotein EscJ
  EcZ:  Z4180 ZescJ
  Ecs:  ECs3716 ECs4573
  Ype:  YPCD1.59 YPO0263
  Sty:  STM1409 STM2871
  Pae:  PA1723
  Rso:  RSp0867
  Mlo:  mlr6339
  Ctr:  CT559
  Cpn:  CPn0828
_______

[I] COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase
  Hbs:  VNG6298C
  Tac:  Ta0818 Ta0820
  Pya:  PAE2827
  Ape:  APE2468
  Fnu:  FN0814
  Sau:  SA0227
  Lin:  lin2275
  Bha:  BH3898
  Eco:  ydiF
  EcZ:  ZydiF
  Ecs:  ECs2401
  Sty:  STM1357
  Rso:  RSc0471
  Sme:  SMa1409 SMc04399
  Bme:  BMEI0021
  Mlo:  mlr3047
_______

[R] COG4671 Predicted glycosyl transferase
  Syn:  sll1722
  Nos:  all5196 alr5197 alr5198
  Atu:  AGc4693 AGc4697
  Sme:  SMb21264 SMb21266
  Mlo:  mlr3248 mlr3252
_______

[S] COG4672 Phage-related protein
  EcZ:  Z0977 Z1375 Z1815 Z1914 Z2142 Z2352 Z3082
        Z3315 Z6033
  Ecs:  ECs0839 ECs1116 ECs1555 ECs1645 ECs1805 ECs1985 ECs2164
        ECs2238 ECs2723 ECs2947
  Ype:  YPMT1.09c YPO2122
  Sty:  STM0921 STM1045 STM2592
  Pae:  PA0638
  Rso:  RSc1694
_______

[R] COG4674 Uncharacterized ABC-type transport system, ATPase component
  Dra:  DRA0323
  Cgl:  Cgl0909
  Bha:  BH0248
  Syn:  sll0764
  Nos:  all1948
  Ype:  YPO1190
  Pae:  PA4861
  Rso:  RSc2038
  Atu:  AGc4375 AGpA797
  Sme:  SMb20602
  Mlo:  mll0758
_______

[S] COG4675 Microcystin-dependent protein
  Nos:  alr4706
  Rso:  RSc0116 RSc0117 RSc0118
  Mlo:  mll4441 mll4442 mll4443
_______

[S] COG4676 Uncharacterized protein conserved in bacteria
  Eco:  yfaP
  EcZ:  Z3478
  Ecs:  ECs3108
  Pae:  PA4487 PA4492
  Rso:  RSc3027 RSc3028
_______

[G] COG4677 Pectin methylesterase
  Cac:  CAC3373
  Eco:  ybhC
  EcZ:  ZybhC
  Ecs:  ECs0800
  Ype:  YPO0424
  Sty:  STM0786
  Rso:  RSp0138
_______

[G] COG4678 Muramidase (phage lambda lysozyme)
  Syn:  slr0795 slr1966
  Nos:  all7671 alr2752
  EcZ:  Z1876
  Ecs:  ECs1622
  Rso:  RSc1700
_______

[S] COG4679 Phage-related protein
  Spn:  SP1143
  Nos:  all1034
  EcZ:  Z3230
  Ecs:  ECs2869
  Ype:  YPO2321 YPO3486
  Sty:  STM3906
  Hin:  HI0660
  Xfa:  XF1573 XF1678 XFa0034
_______

[S] COG4680 Uncharacterized protein conserved in bacteria
  Nos:  asl4856
  Eco:  ygjN
  EcZ:  ZygjN
  Ecs:  ECs3965
  Sty:  STM4031
  Sme:  SMc00822
  Mlo:  mll1857
_______

[S] COG4681 Uncharacterized protein conserved in bacteria
  Eco:  yaeQ
  EcZ:  Z0202
  Ecs:  ECs0192
  Ype:  YPO1065
  Sty:  STM0239
  Pae:  PA3726
  Rso:  RSc0785
_______

[S] COG4682 Predicted membrane protein
  Bsu:  BS_yubF
  Eco:  yiaA yiaB
  EcZ:  ZyiaA ZyiaB
  Ecs:  ECs4445 ECs4446
  Ype:  YPO0112
  Sty:  STM3659
  Rso:  RSc0141
_______

[S] COG4683 Uncharacterized protein conserved in bacteria
  Mtu:  Rv2022c Rv3182
  MtC:  MT2078 MT3274
  Nos:  all0604
  Ype:  YPPCP1.09c
_______

[S] COG4684 Predicted membrane protein
  Cac:  CAC0331 CAC2752
  Lla:  L166479
  Spy:  SPy1223
  Spn:  SP1232
_______

[S] COG4685 Uncharacterized protein conserved in bacteria
  Eco:  yfaA
  EcZ:  ZyfaA
  Ecs:  ECs3113
  Pae:  PA4491
  Rso:  RSc3032
_______

[S] COG4687 Uncharacterized protein conserved in bacteria
  Cac:  CAP0069
  Lla:  L148513 L149781
  Spy:  SPy1741
  Spn:  SP0412
  Lin:  lin0146
_______

[S] COG4688 Uncharacterized protein conserved in bacteria
  EcZ:  Z3942
  Ecs:  ECs3510
  Pmu:  PM1947
  Rso:  RSc1845 RSp0920
_______

[Q] COG4689 Acetoacetate decarboxylase
  Cac:  CAP0165
  Rso:  RSp1058
  Mlo:  mll5917 mlr2399 mlr3634
_______

[E] COG4690 Dipeptidase
  Mac:  MA3377
  Lla:  L324 L48417
  Spy:  SPy0713 SPy2066
  Sty:  STM1094
  Pae:  PA4677
_______

[R] COG4691 Plasmid stability protein
  Mtu:  Rv1952
  MtC:  MT2002
  Xfa:  XF1590
  Sme:  SMa0548 SMb21509
_______

[G] COG4692 Predicted neuraminidase (sialidase)
  Sty:  STM1252
  Hpy:  HP0580
  jHp:  jhp0527
  Atu:  AGpA102
  Sme:  SMb20145
_______

[Q] COG4693 Oxidoreductase (NAD-binding), involved in siderophore biosynthesis
  Ype:  YPO0774 YPO1909
  Pae:  PA4224
  Rso:  RSc1805
_______

[S] COG4694 Uncharacterized protein conserved in bacteria
  Xfa:  XF2411
  Rso:  RSc2619
  Hpy:  HP1142
  jHp:  jhp1070
_______

[S] COG4695 Phage-related protein
  Cac:  CAC1894
  Lla:  L35649 L66478
  Spy:  SPy0555
  Eco:  ymfO
  EcZ:  Z1362 Z1363 Z1806_1 Z1849 Z3328_1 Z6042_1
  Ecs:  ECs1544_1 ECs1592 ECs1795_1 ECs1974 ECs2248_1
  Rso:  RSc1682
  Atu:  AGc1743
  Bme:  BMEI1349
  Mlo:  mlr8522
  Ccr:  CC2788
_______

[S] COG4696 Uncharacterized protein conserved in bacteria
  Dra:  DR2231
  Lla:  L143879_2
  Spy:  SPy1781_2
  Spn:  SP1997_2
_______

[S] COG4697 Uncharacterized protein conserved in archaea
  Pho:  PH0222
  Pab:  PAB0137
  Sso:  SSO3037 SSO3038
  Ape:  APE0560
_______

[S] COG4698 Uncharacterized protein conserved in bacteria
  Lla:  L101577
  Spy:  SPy1491
  Lin:  lin1975
  Bsu:  BS_ypmS
  Bha:  BH1181
_______

[S] COG4699 Uncharacterized protein conserved in bacteria
  Lla:  L100735
  Spy:  SPy0100
  Spn:  SP2054
  Sau:  SA1235
  Lin:  lin1419
_______

[S] COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats
  EcZ:  Z4823
  Ecs:  ECs4300
  Rso:  RSc0994
  Ccr:  CC0483
_______

[S] COG4701 Uncharacterized protein conserved in bacteria
  Ype:  YPO0562
  Vch:  VC2395
  Hin:  HI0907
  Pmu:  PM1221
_______

[S] COG4702 Uncharacterized conserved protein
  Sce:  YBR137w
  Spo:  SPBP4H10.12
  Ype:  YPO2534
  Sme:  SMc03110
  Bme:  BMEI0598
  Mlo:  mlr5144
_______

[S] COG4703 Uncharacterized protein conserved in bacteria
  Lla:  L191704
  Spy:  SPy1508
  Spn:  SP0822
  Lin:  lin1007
  Bsu:  BS_ykuJ
_______

[S] COG4704 Uncharacterized protein conserved in bacteria
  Nos:  all5344 alr3548
  Rso:  RSp0211
  Ccr:  CC0332
_______

[S] COG4705 Uncharacterized membrane-anchored protein conserved in bacteria
  Nos:  all7626
  Rso:  RSc3405 RSp0114
  Mlo:  mlr4456
_______

[I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
  EcZ:  Z4864
  Ecs:  ECs4339
  Nme:  NMB1701
  Rso:  RSc0425 RSp0360
_______

[S] COG4707 Uncharacterized protein conserved in bacteria
  Lla:  L40005 L52191
  Sau:  SA1799
  Bha:  BH3547
_______

[S] COG4708 Predicted membrane protein
  Cac:  CAC2413
  Lla:  L2611
  Spy:  SPy0749
  Spn:  SP1012
  Lin:  lin0860
_______

[S] COG4709 Predicted membrane protein
  Cac:  CAC0572
  Spy:  SPy2173
  Spn:  SP0099
  Sau:  SA1741
  Lin:  lin0609
  Ccr:  CC3409
_______

[R] COG4710 Predicted DNA-binding protein with an HTH domain
  Xfa:  XF1696
  Cje:  Cj1225
  Atu:  AGc1208
_______

[S] COG4711 Predicted membrane protein
  Afu:  AF0802
  Hbs:  VNG2399H
  Aae:  aq_1481
  Nos:  all4652
  Atu:  AGl1426
  Sme:  SMa0288
_______

[S] COG4712 Uncharacterized protein conserved in bacteria
  Dra:  DR0423
  Cac:  CAC1936
  Lla:  L49824
_______

[S] COG4713 Predicted membrane protein
  Cac:  CAC0024
  Lla:  L9639
  Spy:  SPy0798
_______

[S] COG4714 Uncharacterized membrane-anchored protein conserved in bacteria
  Sty:  STM0777
  Pmu:  PM1919
  Rso:  RSc2523
_______

[S] COG4715 Uncharacterized conserved protein
  Hbs:  VNG6400H
  Mac:  MA0461 MA0464
  Dra:  DRA0125
  Nos:  all4744
  Vch:  VC0809
  Ccr:  CC3482
_______

[S] COG4716 Myosin-crossreactive antigen
  Lla:  L180241
  Spy:  SPy0470
  Sau:  SA0102
  Lin:  lin0483
_______

[S] COG4717 Uncharacterized conserved protein
  Mac:  MA2362
  Sau:  SA1661
  Lin:  lin2324
  Bsu:  BS_yhaN
  Sme:  SMc01910
_______

[S] COG4718 Phage-related protein
  EcZ:  Z0976 Z2141 Z2353 Z3083
  Ecs:  ECs0838 ECs1115 ECs1554 ECs1644 ECs1804 ECs1984 ECs2165
        ECs2239 ECs2724 ECs2948
  Ype:  YPMT1.10c YPO2120
  Sty:  STM0919 STM1042 STM2593
  Pae:  PA0637
  Rso:  RSc1691
_______

[S] COG4719 Uncharacterized protein conserved in bacteria
  Dra:  DR1708
  Nos:  all3291
  Sme:  SMc01709
_______

[S] COG4720 Predicted membrane protein
  Pho:  PH1832
  Pab:  PAB2090
  Cac:  CAC0634
  Lla:  L123147 L85854
  Spy:  SPy1208 SPy1899
  Spn:  SP0482 SP1597
  Sau:  SA2477
_______

[S] COG4721 Predicted membrane protein
  Cgl:  Cgl1054
  Spn:  SP0719
  Sau:  SA0929
  Bsu:  BS_ykoE
_______

[S] COG4722 Phage-related protein
  Cac:  CAC0062
  Lla:  L63101
  Spy:  SPy0698 SPy0995 SPy1447
  Lin:  lin2567
  Bsu:  BS_yomH
  Bha:  BH0013 BH0961 BH3517
_______

[S] COG4723 Phage-related protein, tail component
  EcZ:  Z0979 Z1378_2 Z1820 Z2144 Z2348 Z2350 Z3079
        Z3313 Z6031
  Ecs:  ECs0841 ECs1118 ECs1559 ECs1647 ECs1987 ECs2162 ECs2236
        ECs2721 ECs2945
  Ype:  YPMT1.07c YPO2129
  Sty:  STM0923 STM1047 STM2590
  Pae:  PA0640
  Rso:  RSc1696
_______

[G] COG4724 Endo-beta-N-acetylglucosaminidase D
  Lla:  L122924
  Spn:  SP0498_2
  Bha:  BH0785_1
_______

[TK] COG4725 Transcriptional activator, adenine-specific DNA methyltransferase
  Sce:  YGL192w
  Nos:  all7280
  Sme:  SMb20549
_______

[NU] COG4726 Tfp pilus assembly protein PilX
  Pae:  PA4553
  Xfa:  XF0031 XF0476
  Nme:  NMB0889
  NmA:  NMA1109
  Rso:  RSc0719 RSc0725 RSp1289
_______

[S] COG4727 Uncharacterized protein conserved in bacteria
  Sty:  STM0538
  Xfa:  XF1837
  Rso:  RSp1166
_______

[S] COG4728 Uncharacterized protein conserved in bacteria
  Cac:  CAC1208
  Pae:  PA3012
  Rso:  RSc1482
_______

[S] COG4729 Uncharacterized conserved protein
  Afu:  AF0637
  Hbs:  VNG0539C
  Bha:  BH2946
  Pae:  PA5543
  Pmu:  PM1579
_______

[S] COG4731 Uncharacterized protein conserved in bacteria
  Rso:  RSc2798 RSp0587
  Hpy:  HP1028
  jHp:  jhp0396
  Atu:  AGc1859 AGc3603
  Sme:  SMc02391
  Bme:  BMEI1315
  Mlo:  mll7718 mll8095
  Ccr:  CC1524 CC1636
  Tpa:  TP0594
  Bbu:  BB0776
_______

[S] COG4732 Predicted membrane protein
  Pya:  PAE2529
  Ape:  APE2411
  Spn:  SP0723
  Sau:  SA1136
_______

[S] COG4733 Phage-related protein, tail component
  EcZ:  Z0980 Z1379 Z1380 Z1487 Z1915 Z1916 Z2145
        Z2344 Z2346 Z3077 Z3311 Z6029 Z6030
  Ecs:  ECs0842 ECs1121 ECs1233 ECs1648 ECs1806 ECs1990 ECs2161
        ECs2234 ECs2235 ECs2719 ECs2720 ECs2943 ECs2944
  Ype:  YPMT1.06c YPO2131
  Sty:  STM0925 STM1048 STM2589
  Pae:  PA0641
  Rso:  RSc1698
_______

[R] COG4734 Antirestriction protein
  Nos:  alr8029
  Ype:  YPMT1.61c
  Atu:  AGc2194
_______

[S] COG4735 Uncharacterized protein conserved in bacteria
  Syn:  slr0975
  Nos:  alr3689
  Eco:  yaaW
  EcZ:  Z0011
  Ecs:  ECs0012
  Sty:  STM0010
  Hpy:  HP1587 HP1588 HP1589 HP1590
  jHp:  jhp1493 jhp1494
_______

[O] COG4736 Cbb3-type cytochrome oxidase, subunit 3
  Vch:  VC1440
  NmA:  NMA1978
  Rso:  RSc1278
  Hpy:  HP0146
  jHp:  jhp0134
  Cje:  Cj1488c
  Sme:  SMa0616 SMa0767 SMa1214
  Mlo:  msl6627 msr6413
  Ccr:  CC1403
_______

[S] COG4737 Uncharacterized protein conserved in bacteria
  Nos:  asl1720
  EcZ:  Z1060 Z5150
  Ecs:  ECs4597
  Sty:  STM3777
  Nme:  NMB1890
  NmA:  NMA0565
  Rso:  RSc0124
  Sme:  SMc01995
_______

[K] COG4738 Predicted transcriptional regulator
  Afu:  AF0674
  Mac:  MA1671 MA3129 MA3130 MA3302
  Tac:  Ta0601
  Tvo:  TVN0627
_______

[S] COG4739 Uncharacterized protein containing a ferredoxin domain
  Afu:  AF2201
  Mac:  MA0725 MA2514
  Mka:  MK0124
_______

[R] COG4740 Predicted metalloprotease
  Mac:  MA2901
  Mth:  MTH222
  Mka:  MK0745_2
_______

[F] COG4741 Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase
  Mac:  MA3400
  Tac:  Ta0407
  Tvo:  TVN1166
  Tma:  TM0646
  Pya:  PAE2728
_______

[K] COG4742 Predicted transcriptional regulator
  Afu:  AF0102 AF0396 AF2271
  Mac:  MA0191 MA0205 MA0356 MA0380 MA0459 MA0460 MA0622
        MA0802 MA0803 MA0862 MA1797 MA1953 MA2499 MA2551
        MA3000 MA3389 MA4011 MA4167 MA4375 MA4383 MA4397
        MA4398 MA4560 MA4582 MA4619
  Mth:  MTH1579 MTH1843 MTH1844
_______

[S] COG4743 Predicted membrane protein
  Mac:  MA4465
  Mth:  MTH381
  Pho:  PH0381
  Pab:  PAB1055
_______

[S] COG4744 Uncharacterized conserved protein
  Mac:  MA0345 MA4425 MA4642
  Mth:  MTH670
  Mka:  MK0065
  Pae:  PA1925
_______

[O] COG4745 Predicted membrane-bound mannosyltransferase 
  Afu:  AF0753
  Hbs:  VNG0631C VNG2064H VNG2156C
  Mac:  MA4085
_______

[S] COG4746 Uncharacterized protein conserved in archaea
  Hbs:  VNG0574C
  Mac:  MA2221 MA3968
  Mth:  MTH865
  Mja:  MJ0738
_______

[R] COG4747 ACT domain-containing protein
  Afu:  AF1672
  Mac:  MA3854
  Mth:  MTH162 MTH1854
_______

[S] COG4748 Uncharacterized conserved protein
  Mac:  MA3840
  Cgl:  Cgl2373
  Lin:  lin1828
  Nos:  all3000
  Bbu:  BB0852
_______

[S] COG4749 Uncharacterized protein conserved in archaea
  Afu:  AF1110
  Hbs:  VNG1611C
  Mac:  MA3684
_______

[M] COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes
  Fnu:  FN1237_1 FN1668
  Spn:  SP1267
  Hin:  HI1539
  Tpa:  TP0107_1
_______

[S] COG4752 Uncharacterized protein conserved in bacteria
  Aae:  aq_054
  Tma:  TM1570
  Fnu:  FN0282
_______

[T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
  Fnu:  FN0189
  Spy:  SPy1062 SPy1556 SPy1587
  Spn:  SP0156 SP0661
  Sau:  SA0215
  Lin:  lin2118
  Bsu:  BS_yesN
  Bha:  BH0793 BH1123 BH1910 BH2109 BH2728 BH3679 BH3842
_______

[S] COG4754 Uncharacterized conserved protein
  Tac:  Ta1176
  Tvo:  TVN0392
  Pya:  PAE1069
  Sso:  SSO3248
  Xfa:  XF0412_2
  Rso:  RSc3372_2
_______

[S] COG4755 Uncharacterized protein conserved in archaea
  Pya:  PAE1488
  Sso:  SSO0205
  Ape:  APE0503
_______

[R] COG4756 Predicted cation transporter
  Afu:  AF0787
  Pya:  PAE2769
  Ape:  APE0136
_______

[R] COG4757 Predicted alpha/beta hydrolase
  Cgl:  Cgl0006
  Pae:  PA1239 PA1291
  Rso:  RSp0795
  Bme:  BMEI1633
_______

[S] COG4758 Predicted membrane protein
  Lla:  L110588
  Spy:  SPy1623
  Spn:  SP0385
  Sau:  SA1702
  Lin:  lin1019
  Bsu:  BS_yvqF
  Bha:  BH1198
_______

[O] COG4759 Uncharacterized protein conserved in bacteria containing thioredoxin-like domain
  Cgl:  Cgl0602
  Syn:  sll1203
  Nos:  all1981 all2608 all2617 alr2187 alr2582 alr2589 alr2660
_______

[S] COG4760 Predicted membrane protein
  Cgl:  Cgl0959
  Mtu:  Rv1072
  MtC:  MT1102
  Mle:  ML2400
  Xfa:  XF2760
_______

[S] COG4762 Uncharacterized protein conserved in bacteria
  Dra:  DR1237_2 DR2035
  Cgl:  Cgl1511
  Mtu:  Rv2616
  MtC:  MT2691.1
_______

[S] COG4763 Predicted membrane protein
  Cgl:  Cgl2135
  Eco:  ycfT
  EcZ:  ZycfT
  Ecs:  ECs1493
  Mlo:  mll2248
_______

[S] COG4764 Uncharacterized protein conserved in bacteria
  Pae:  PA2230
  Atu:  AGc4452
  Sme:  SMc01561
  Bme:  BMEI0785
  Mlo:  mlr1655
_______

[S] COG4765 Uncharacterized protein conserved in bacteria
  Atu:  AGc2448
  Sme:  SMc01347
  Bme:  BMEI1065
  Mlo:  mlr0199
  Ccr:  CC1886
  Rpr:  RP359
  Rco:  RC0487
_______

[E] COG4766 Ethanolamine utilization protein
  Fnu:  FN0090
  Lin:  lin1151
  Eco:  eutQ
  EcZ:  Z3716
  Ecs:  ECs3322
  Sty:  STM2468
  Atu:  AGpA480
_______

[V] COG4767 Glycopeptide antibiotics resistance protein
  Cac:  CAC0652 CAC0829 CAC1444
  Cgl:  Cgl2952 Cgl2953
  Lla:  L188881 L98876
  Spn:  SP0049 SP0769
  Lin:  lin0486 lin1455 lin1804 lin1900
  Bha:  BH2294 BH3967
_______

[R] COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain
  Lla:  L6768
  Spy:  SPy0587
  Spn:  SP1411
  Sau:  SA1560
  Lin:  lin1643
  Bsu:  BS_yoxC BS_ytxG
  Bha:  BH3245
_______

[S] COG4769 Predicted membrane protein
  Tma:  TM1555
  Fnu:  FN0367
  Lla:  L179010
  Lin:  lin2789
  Tpa:  TP0348
_______

[I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit
  Hbs:  VNG1532G
  Cgl:  Cgl0680
  Mtu:  Rv2501c Rv3285
  MtC:  MT2576 MT3384
  Mle:  ML0726
  Pae:  PA2012 PA2891
  Rso:  RSc0265
  Atu:  AGl1864 AGl2704 AGl580GM
  Sme:  SMb20756 SMb21124
  Bme:  BMEI0800 BMEI1925
  Mlo:  mll0871 mll6011 mll7727
  Ccr:  CC2168 CC2179
  Rpr:  RP618
  Rco:  RC0959
_______

[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins
  Eco:  cirA fepA
  EcZ:  Z1178 Z1617 ZcirA ZfepA
  Ecs:  ECs0623 ECs1360 ECs3047
  Ype:  YPO1313
  Sty:  STM0585 STM2199 STM2777
  Vch:  VC0475
  Pae:  PA0931 PA1922 PA2688
  Cje:  Cj0755
  Atu:  AGl1858
_______

[P] COG4772 Outer membrane receptor for Fe3+-dicitrate
  Eco:  fecA
  Pae:  PA3268 PA3901
  Hpy:  HP0686 HP0807 HP1400
  jHp:  jhp0626 jhp0743 jhp1426
  Sme:  SMc02721
  Ccr:  CC0139
_______

[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
  Eco:  fhuE
  EcZ:  ZfhuE
  Ecs:  ECs1480
  Ype:  YPO1537
  Sty:  STM1204
  Pae:  PA2398 PA4168 PA4221
  Nme:  NMB1829 NMB1882
  NmA:  NMA0575 NMA1662 NMA1663
_______

[P] COG4774 Outer membrane receptor for monomeric catechols
  Eco:  fiu
  EcZ:  Z1026
  Ecs:  ECs0883
  Pae:  PA1322 PA4514
  Xfa:  XF0599
  Ccr:  CC0028
_______

[M] COG4775 Outer membrane protein/protective antigen OMA87
  Sce:  YNL026w
  Spo:  SPAC17C9.06
  Aae:  aq_1300
  Tma:  TM0448
  Fnu:  FN1911
  Dra:  DR0379
  Syn:  slr1227
  Nos:  alr0075 alr2269 alr4893
  Eco:  yaeT
  EcZ:  ZyaeT
  Ecs:  ECs0179
  Ype:  YPO1052
  Sty:  STM0224
  Buc:  BU237_1
  Vch:  VC2252
  Pae:  PA3648
  Hin:  HI0917
  Pmu:  PM1992
  Xfa:  XF1046
  Nme:  NMB0182
  NmA:  NMA0085
  Rso:  RSc1412
  Hpy:  HP0655
  jHp:  jhp0600
  Cje:  Cj0129c
  Atu:  AGc2554
  Sme:  SMc02094
  Bme:  BMEI0830
  Mlo:  mll0636
  Ccr:  CC1915
  Rpr:  RP160
  Rco:  RC0202
  Ctr:  CT241
  Cpn:  CPn0300
  Tpa:  TP0326
  Bbu:  BB0795
_______

[K] COG4776 Exoribonuclease II
  Eco:  rnb
  EcZ:  Zrnb
  Ecs:  ECs1859
  Ype:  YPO2235
  Sty:  STM1702
  Buc:  BU266
  Vch:  VCA0805
  Hin:  HI1733
  Pmu:  PM0181
_______

[P] COG4778 ABC-type phosphonate transport system, ATPase component
  Nos:  all2217
  Eco:  phnL
  EcZ:  ZphnL
  Ecs:  ECs5079
  Ype:  YPO3462
  Pae:  PA3375
  Atu:  AGc293
  Sme:  SMb20764
  Mlo:  mll9150 mlr3349 mlr9286
_______

[P] COG4779 ABC-type enterobactin transport system, permease component
  Cgl:  Cgl0037 Cgl0492
  Eco:  fepG
  EcZ:  ZfepG
  Ecs:  ECs0628
  Ype:  YPO1534
  Sty:  STM0591
  Vch:  VC0778
  Pae:  PA4161
  Atu:  AGpA451
_______

[C] COG4781 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase
  Lla:  L58914_1
  Spy:  SPy0839_1
  Spn:  SP0994_1
  Sau:  SA0220_1
  Lin:  lin0625_1
_______

[S] COG4782 Uncharacterized protein conserved in bacteria
  Nos:  alr1448
  Rso:  RSc0827
  Atu:  AGc108 AGc699
  Sme:  SMa0599 SMa1776 SMb20335 SMc00955
  Bme:  BMEI1594
  Mlo:  mll0158 mll0159 mll7123
_______

[R] COG4783 Putative Zn-dependent protease, contains TPR repeats
  Aae:  aq_972
  Syn:  slr1971
  Nos:  all4371
  Eco:  yfgC
  EcZ:  Z3757
  Ecs:  ECs3356
  Ype:  YPO3069
  Sty:  STM2494
  Vch:  VC2164
  Pae:  PA1005
  Xfa:  XF2594
  Rso:  RSc0561
  Bme:  BMEI1059
  Mlo:  mll0209
  Ccr:  CC1878
_______

[R] COG4784 Putative Zn-dependent protease
  Pae:  PA5047
  Atu:  AGc4913
  Sme:  SMc03872
  Bme:  BMEI0282
  Mlo:  mll3863
_______

[R] COG4785 Lipoprotein NlpI, contains TPR repeats
  Eco:  nlpI
  EcZ:  ZyhbM
  Ecs:  ECs4044
  Ype:  YPO3489
  Sty:  STM3281
  Vch:  VC0648
  Hin:  HI0230
  Pmu:  PM1113
_______

[N] COG4786 Flagellar basal body rod protein
  Aae:  aq_2051 aq_834
  Tma:  TM1542 TM1543
  Cac:  CAC2139 CAC2140
  Lin:  lin0690
  Bsu:  BS_flgE BS_flhO BS_flhP
  Bha:  BH2449 BH3737 BH3738
  Eco:  flgG
  EcZ:  ZflgG
  Ecs:  ECs1456
  Ype:  YPO0728 YPO1804
  Sty:  STM1179
  Buc:  BU342
  Vch:  VC2195
  Pae:  PA1082
  Rso:  RSp0347
  Hpy:  HP1092 HP1585
  jHp:  jhp0333 jhp1492
  Cje:  Cj0697 Cj0698
  Atu:  AGc972 AGc982
  Sme:  SMc03024 SMc03030
  Bme:  BMEII1086 BMEII1107
  Mlo:  mlr2907 mlr2915
  Ccr:  CC2063 CC2064
  Tpa:  TP0960 TP0961
  Bbu:  BB0774 BB0775
_______

[N] COG4787 Flagellar basal body rod protein
  Eco:  flgF
  EcZ:  ZflgF
  Ecs:  ECs1455
  Ype:  YPO1803
  Sty:  STM1178
  Buc:  BU341
  Vch:  VC2196
  Pae:  PA1081
  Rso:  RSp0346
_______

[U] COG4789 Type III secretory pathway, component EscV
  EcZ:  Z4195 ZescV
  Ecs:  ECs3731 ECs4569
  Ype:  YPCD1.34c YPO0266
  Sty:  STM1414 STM2896
  Pae:  PA1703
  Rso:  RSp0863
  Mlo:  mlr6348
  Ctr:  CT090
  Cpn:  CPn0323
_______

[U] COG4790 Type III secretory pathway, component EscR
  EcZ:  Z4189 ZescR
  Ecs:  ECs3725 ECs4583
  Ype:  YPCD1.44 YPO0270
  Sty:  STM1419 STM2890
  Pae:  PA1693
  Rso:  RSp0860
  Mlo:  mlr8766
_______

[U] COG4791 Type III secretory pathway, component EscT
  EcZ:  Z4186 Z4187 ZescT
  Ecs:  ECs3722 ECs3723 ECs4581
  Ype:  YPCD1.46 YPO0272
  Sty:  STM1421 STM2888
  Pae:  PA1691
  Rso:  RSp0872
  Mlo:  mlr6345
  Ctr:  CT564
  Cpn:  CPn0823
_______

[U] COG4792 Type III secretory pathway, component EscU
  EcZ:  ZescU
  Ecs:  ECs4580
  Ype:  YPCD1.47 YPO0273
  Sty:  STM1422
  Pae:  PA1690
  Mlo:  mlr6346
_______

[U] COG4794 Type III secretory pathway, component EscS
  EcZ:  Z4188 ZescS
  Ecs:  ECs3724 ECs4582
  Ype:  YPCD1.45 YPO0271
  Sty:  STM1420 STM2889
  Pae:  PA1692
  Rso:  RSp0859
  Mlo:  msr8694
  Ctr:  CT563
  Cpn:  CPn0824
_______

[U] COG4795 Type II secretory pathway, component PulJ
  Eco:  gspJ ppdB
  EcZ:  ZppdB
  Ecs:  ECs3682
  Ype:  YPO0810 YPO1015
  Sty:  STM2999
  Vch:  VC2727
  Pae:  PA0677 PA2673 PA3098
  Hin:  HI0939
  Pmu:  PM0964
  Xfa:  XF1522_1
  Rso:  RSc3109
  Ccr:  CC0179
_______

[U] COG4796 Type II secretory pathway, component HofQ
  Aae:  aq_585
  Tma:  TM0088 TM1117
  Syn:  slr1277
  Nos:  alr1031_2
  Eco:  hofQ
  EcZ:  ZhofQ
  Ecs:  ECs4233
  Ype:  YPO0150
  Sty:  STM3488
  Vch:  VC2630
  Pae:  PA5040
  Hin:  HI0435
  Pmu:  PM1225
  Xfa:  XF0373
  Nme:  NMB1812
  NmA:  NMA0650
  Rso:  RSc2303 RSc2971 RSp0143 RSp0474
_______

[R] COG4797 Predicted regulatory domain of a methyltransferase
  Fnu:  FN0701_2
  Pmu:  PM0374_2
  Nme:  NMB1270_2
  NmA:  NMA1475_2
  Rpr:  RP027 RP789_2
  Rco:  RC0031_2 RC1221_2
_______

[R] COG4798 Predicted methyltransferase
  Nos:  alr7345 asr7339
  Mlo:  mlr5283 msl1894
  Ccr:  CC1026 CC1353 CC2257
_______

[I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
  Afu:  AF2217
  Hbs:  VNG0623G VNG1529G
  Pho:  PH1287
  Pab:  PAB1769
  Sso:  SSO2463
  Sce:  YMR207c_3 YNR016c_3
  Spo:  SPAC56E4.04c_3
  Tma:  TM0716
  Fnu:  FN0204
  Dra:  DR1316 DR1542 DRA0310_3
  Cgl:  Cgl0687 Cgl0688 Cgl2810
  Mtu:  Rv0974c Rv2247 Rv2502c Rv3280 Rv3799c
  MtC:  MT1002 MT2307 MT2577 MT3379.1 MT3906
  Mle:  ML0102 ML0731 ML1657
  Bsu:  BS_yngE BS_yqjD
  Bha:  BH1136 BH2957
  Pae:  PA1400_3 PA2014 PA2888
  Rso:  RSc0269
  Atu:  AGl2481 AGl2706
  Sme:  SMb20755 SMb21122
  Bme:  BMEI0801 BMEI1924
  Mlo:  mll0348 mll6012 mll7731
  Ccr:  CC1975 CC2170 CC3214_3
  Rpr:  RP619
  Rco:  RC0960
_______

[K] COG4800 Predicted transcriptional regulator with an HTH domain
  Afu:  AF0643
  Mac:  MA0067
  Mja:  MJ0621
_______

[R] COG4801 Predicted acyltransferase
  Afu:  AF1362
  Hbs:  VNG0507C
  Mac:  MA0120
  Mka:  MK0771_2
_______

[C] COG4802 Ferredoxin-thioredoxin reductase, catalytic subunit
  Afu:  AF1535
  Mac:  MA1659_1 MA2870
  Mth:  MTH1578_1
  Syn:  sll0554
  Nos:  alr4065
_______

[S] COG4803 Predicted membrane protein
  Mac:  MA2442 MA2627 MA2644
  Syn:  sll1106
  Atu:  AGc2272
  Sme:  SMa1672 SMc01723
  Bme:  BMEII0913
  Mlo:  mlr6724
_______

[S] COG4804 Uncharacterized conserved protein
  Mac:  MA2412 MA2994
  Fnu:  FN1448
  Eco:  yhcG
  EcZ:  ZyhcG
  Ecs:  ECs4093
  Sty:  STM3332
  Rso:  RSc2621
  Rco:  RC0365 RC0366 RC0367 RC0739 RC0740
_______

[S] COG4805 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl0137
  Xfa:  XF0172 XF0221 XF0222
  Ccr:  CC1056 CC1085 CC2014 CC3053
_______

[G] COG4806 L-rhamnose isomerase
  Lin:  lin2980
  Bsu:  BS_yulE
  Bha:  BH1552
  Eco:  rhaA
  EcZ:  ZrhaA
  Ecs:  ECs4830
  Ype:  YPO0329
  Sty:  STM4046
_______

[S] COG4807 Uncharacterized protein conserved in bacteria
  Fnu:  FN0742
  Eco:  yehS
  EcZ:  ZyehS
  Ecs:  ECs2935
  Ype:  YPO1186
  Sty:  STM2157
  Pae:  PA0915
_______

[S] COG4808 Uncharacterized protein conserved in bacteria
  Sau:  SA2247
  Lin:  lin0239
  Eco:  yehR
  EcZ:  ZyehR
  Ecs:  ECs2934
  Sty:  STM2156 STM2156A
_______

[G] COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase
  Mac:  MA3562 MA3563
  Mja:  MJ1604
  Pho:  PH0589 PH1645
  Pab:  PAB0967 PAB2013
_______

[E] COG4810 Ethanolamine utilization protein
  Fnu:  FN0074
  Lin:  lin1108
  Eco:  eutS
  EcZ:  Z3718
  Ecs:  ECs3324
  Sty:  STM2055 STM2470
_______

[S] COG4811 Predicted membrane protein
  Lin:  lin0773
  Eco:  yobD
  EcZ:  Z2863
  Ecs:  ECs2530
  Ype:  YPO1755
  Sty:  STM1833
  Pmu:  PM0830
_______

[E] COG4812 Ethanolamine utilization cobalamin adenosyltransferase
  Fnu:  FN0085
  Lin:  lin1145
  Eco:  eutT
  EcZ:  Z3715
  Ecs:  ECs3321
  Sty:  STM2467
_______

[G] COG4813 Trehalose utilization protein
  Lin:  lin2264
  Bha:  BH1247
  Atu:  AGl2958
  Sme:  SMb20329
  Bme:  BMEII0939
  Mlo:  mll3105
_______

[R] COG4814 Uncharacterized protein with an alpha/beta hydrolase fold
  Lla:  L170548 L36511
  Sau:  SA1990
  Lin:  lin0949 lin0950 lin2722
_______

[S] COG4815 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl1305 Cgl1796 Cgl1840 Cgl2019
  Sau:  SA0324
  Lin:  lin1093
_______

[E] COG4816 Ethanolamine utilization protein
  Fnu:  FN0081
  Lin:  lin1116 lin1141
  Eco:  eutL
  EcZ:  Z3704
  Ecs:  ECs3310
  Sty:  STM2039 STM2456
_______

[S] COG4817 Uncharacterized protein conserved in bacteria
  Lla:  L127611 L127921
  Lin:  lin0728
  Bha:  BH3976 BH3977 BH3980
_______

[S] COG4818 Predicted membrane protein
  Afu:  AF0105 AF0736
  Mac:  MA0665 MA3413
  Mja:  MJ1443 MJ1527
_______

[E] COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition
  Fnu:  FN0078
  Lin:  lin1138
  Eco:  eutA
  EcZ:  Z3707
  Ecs:  ECs3313
  Sty:  STM2459
_______

[E] COG4820 Ethanolamine utilization protein, possible chaperonin
  Fnu:  FN1783
  Lin:  lin1125
  Eco:  eutJ
  EcZ:  ZeutJ
  Ecs:  ECs3316
  Sty:  STM2462
_______

[R] COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain
  Lin:  lin0024 lin2794
  Bha:  BH0227 BH3325
  Bme:  BMEII0386
_______

[H] COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase
  Fnu:  FN1263
  Cac:  CAC0583 CAC1373
  Lin:  lin1165
  Sty:  STM2025
_______

[V] COG4823 Abortive infection bacteriophage resistance protein
  Fnu:  FN1184
  Lin:  lin2373 lin2562
  Pmu:  PM1540 PM1783
_______

[R] COG4824 Phage-related holin (Lysis protein)
  Cac:  CAC1842
  Lin:  lin0175
  Bsu:  BS_yqxH BS_ytkC
  Bha:  BH0965
_______

[S] COG4825 Uncharacterized membrane-anchored protein conserved in bacteria
  Cgl:  Cgl1381
  Mtu:  Rv1697
  MtC:  MT1736
  Mle:  ML1361
  Bha:  BH2771
_______

[O] COG4826 Serine protease inhibitor
  Mac:  MA2246 MA2613 MA3388
  Pya:  PAE0049
  Nos:  all0778
_______

[R] COG4827 Predicted transporter
  Mac:  MA0343 MA4427 MA4640
  Mth:  MTH672
  Mka:  MK0067
_______

[S] COG4828 Predicted membrane protein
  Mac:  MA1606 MA1607 MA1608
  Dra:  DR1328
  Syn:  sll0939
_______

[Q] COG4829 Muconolactone delta-isomerase
  Cgl:  Cgl2349
  Mtu:  Rv0316
  MtC:  MT0330
  Pae:  PA2508
_______

[J] COG4830 Ribosomal protein S26
  Pya:  PAE2169
  Sso:  SSO6179
  Sce:  YER131w YGL189c
  Spo:  SPAC1805.11c SPAC806.03c
  Ecu:  ECU06g1445
_______

[S] COG4831 Uncharacterized conserved protein
  Mac:  MA2262
  Sso:  SSO2745
  Aae:  aq_087 aq_088
_______

[S] COG4832 Uncharacterized conserved protein
  Mac:  MA1133
  Fnu:  FN0105
  Lla:  L32072
  Lin:  lin2189
_______

[G] COG4833 Predicted glycosyl hydrolase
  Cgl:  Cgl2713
  Mtu:  Rv0365c
  MtC:  MT0381
  Lin:  lin0763
_______

[S] COG4834 Uncharacterized protein conserved in bacteria
  Lin:  lin1726
  Xfa:  XF1577 XF1682
  Mlo:  mlr8009
_______

[S] COG4835 Uncharacterized protein conserved in bacteria
  Lla:  L5610
  Spy:  SPy0864
  Spn:  SP1558
  Lin:  lin0430
_______

[S] COG4836 Predicted membrane protein
  Sau:  SA1903
  Lin:  lin2671
  Bsu:  BS_ywzB
  Bha:  BH3751
_______

[S] COG4837 Uncharacterized protein conserved in bacteria
  Sau:  SA0798
  Lin:  lin2492
  Bsu:  BS_yuzD
  Bha:  BH3416
_______

[S] COG4838 Uncharacterized protein conserved in bacteria
  Sau:  SA0961
  Lin:  lin1058
  Bsu:  BS_ylaN
  Bha:  BH2626
_______

[D] COG4839 Protein required for the initiation of cell division
  Lla:  L88699
  Spy:  SPy1665
  Spn:  SP0335
  Sau:  SA1023
  Lin:  lin2146
  Bsu:  BS_ftsL
  Bha:  BH2574
_______

[S] COG4840 Uncharacterized protein conserved in bacteria
  Sau:  SA1696
  Lin:  lin1819
  Bsu:  BS_yfkK
  Bha:  BH2488
_______

[S] COG4841 Uncharacterized protein conserved in bacteria
  Sau:  SA1186
  Lin:  lin0943
  Bsu:  BS_yneR
  Bha:  BH2150 BH2252
_______

[S] COG4842 Uncharacterized protein conserved in bacteria
  Cac:  CAC0040 CAC0041 CAC0398 CAC0410 CAC0413 CAC0928 CAC3713
  Cgl:  Cgl0563 Cgl0564
  Mtu:  Rv0288 Rv3017c Rv3019c Rv3444c Rv3445c Rv3875 Rv3890c
        Rv3905c
  MtC:  MT0301 MT3097 MT3104 MT3549 MT3550 MT3989 MT4005
        MT4024
  Mle:  ML0049 ML0363 ML2531
  Sau:  SA0271
  Lin:  lin0049
  Bsu:  BS_yukE
  Bha:  BH0972
_______

[S] COG4843 Uncharacterized protein conserved in bacteria
  Sau:  SA1727
  Lin:  lin1888
  Bsu:  BS_yebF
  Bha:  BH0621
_______

[S] COG4844 Uncharacterized protein conserved in bacteria
  Sau:  SA0800
  Lin:  lin2491
  Bsu:  BS_yuzB
  Bha:  BH3414
_______

[V] COG4845 Chloramphenicol O-acetyltransferase
  Mac:  MA1703
  Dra:  DR2303
  Cac:  CAC0235 CAP0060
  Syn:  slr0299
_______

[O] COG4846 Membrane protein involved in cytochrome C biogenesis
  Sau:  SA1179
  Lin:  lin1690
  Bsu:  BS_yneJ
  Bha:  BH2333
_______

[S] COG4847 Uncharacterized protein conserved in archaea
  Tac:  Ta1093a
  Tvo:  TVN0481
  Pya:  PAE1969
  Ape:  APE0087
_______

[S] COG4848 Uncharacterized protein conserved in bacteria
  Sau:  SA1564
  Lin:  lin1649
  Bsu:  BS_ytpQ
  Bha:  BH3252
_______

[S] COG4849 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2731
  Mtu:  Rv0836c
  MtC:  MT0857
  Rso:  RSp0267
_______

[S] COG4850 Uncharacterized conserved protein
  Sce:  YNL094w
  Spo:  SPBC29B5.04c
  Dra:  DR1192 DRA0358
  Cgl:  Cgl2204
_______

[R] COG4851 Protein involved in sex pheromone biosynthesis
  Sau:  SA1719
  Lin:  lin1869
  Bsu:  BS_yerH
  Bha:  BH0650
_______

[S] COG4852 Predicted membrane protein
  Lla:  L174076
  Lin:  lin0598
  Atu:  AGc3604
  Mlo:  mll8093
_______

[S] COG4853 Uncharacterized protein conserved in bacteria
  Sau:  SA0020
  Lin:  lin0318
  Bsu:  BS_yycI
  Bha:  BH4024
_______

[S] COG4854 Predicted membrane protein
  Afu:  AF1626 AF1792
  Mac:  MA3983
  Pab:  PAB0432
_______

[S] COG4855 Uncharacterized protein conserved in archaea
  Afu:  AF1427
  Mac:  MA3734 MA3735
  Mth:  MTH102
_______

[S] COG4856 Uncharacterized protein conserved in bacteria
  Cac:  CAC3078
  Spy:  SPy1037
  Spn:  SP1560
  Sau:  SA1966
  Lin:  lin2224
  Bsu:  BS_ybbR
  Bha:  BH0266
_______

[R] COG4857 Predicted kinase
  Fnu:  FN1412
  Bsu:  BS_ykrT
  Sme:  SMb20623
  Mlo:  mll7285
_______

[S] COG4858 Uncharacterized membrane-bound protein conserved in bacteria
  Lla:  L196216
  Spy:  SPy1828
  Spn:  SP0184
  Lin:  lin2910
_______

[S] COG4859 Uncharacterized protein conserved in bacteria
  Fnu:  FN0232
  Pae:  PA2504
  Nme:  NMB0685
  NmA:  NMA0887
_______

[S] COG4860 Uncharacterized protein conserved in archaea
  Afu:  AF0421
  Mac:  MA3014
  Tac:  Ta0930
  Tvo:  TVN1072
_______

[S] COG4861 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2730
  Mtu:  Rv0837c
  MtC:  MT0858
  Rso:  RSp0266
_______

[OTN] COG4862 Negative regulator of genetic competence, sporulation and motility
  Lla:  L37085
  Spy:  SPy0281
  Spn:  SP1362
  Sau:  SA0857
  Lin:  lin2294
  Bsu:  BS_mecA BS_ypbH
  Bha:  BH1620 BH2859
_______

[S] COG4863 Uncharacterized protein conserved in bacteria
  Sau:  SA0019
  Lin:  lin0317
  Bsu:  BS_yycH
  Bha:  BH4025
_______

[S] COG4864 Uncharacterized protein conserved in bacteria
  Sau:  SA1402
  Lin:  lin0410
  Bsu:  BS_yqfA
  Bha:  BH1357
_______

[E] COG4865 Glutamate mutase epsilon subunit
  Hbs:  VNG2288G
  Fnu:  FN1855
  EcZ:  Z0893
  Ecs:  ECs0762
_______

[S] COG4866 Uncharacterized conserved protein
  Mac:  MA1791
  Fnu:  FN0277
  Hpy:  HP0292
  jHp:  jhp0277
  Uur:  UU575
_______

[R] COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain
  Dra:  DR2391
  Cgl:  Cgl1032
  Mtu:  Rv0959
  MtC:  MT0986
_______

[S] COG4868 Uncharacterized protein conserved in bacteria
  Fnu:  FN1121
  Cgl:  Cgl2942
  Spy:  SPy1343
  Spn:  SP0341
_______

[Q] COG4869 Propanediol utilization protein
  Tma:  TM0375
  Lin:  lin1124 lin1146
  Sty:  STM2047
_______

[O] COG4870 Cysteine protease
  Afu:  AF1946_2
  Mac:  MA1513_1 MA1660_1 MA2507_1 MA3217 MA3430_1
  Fnu:  FN1281
  Cac:  CAP0004
  Xfa:  XF0156
_______

[S] COG4871 Uncharacterized protein conserved in archaea
  Afu:  AF2246
  Mac:  MA3924_2 MA3925_2
  Mth:  MTH1359
_______

[S] COG4872 Predicted membrane protein
  Mac:  MA2052
  Nos:  all1007
  Bme:  BMEI1071
  Mlo:  mll1060
_______

[S] COG4873 Uncharacterized protein conserved in bacteria
  Sau:  SAS027
  Lin:  lin1000
  Bsu:  BS_ykvS
_______

[S] COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain
  Fnu:  FN0238
  Vch:  VCA0994
  Rso:  RSp0484
_______

[S] COG4875 Uncharacterized protein conserved in bacteria with a cystatin-like fold
  Xfa:  XF1941
  Rso:  RSp1443
  Bme:  BMEI0822
_______

[S] COG4876 Uncharacterized protein conserved in bacteria
  Sau:  SA2298
  Lin:  lin0675
  Bsu:  BS_ydaT
_______

[S] COG4877 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2776
  Spn:  SP2133
  Atu:  AGc3957
_______

[S] COG4878 Uncharacterized protein conserved in bacteria
  Tma:  TM1409
  Fnu:  FN0380 FN0381
  Cac:  CAC0733
_______

[S] COG4879 Uncharacterized protein conserved in archaea
  Pya:  PAE3568
  Sso:  SSO0109
  Ape:  APE0975
_______

[R] COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
  Afu:  AF0817
  Mja:  MJ1554
  Pya:  PAE2544
_______

[S] COG4881 Predicted membrane protein
  Afu:  AF0158
  Pya:  PAE1264
  Ape:  APE2607
_______

[R] COG4882 Predicted aminopeptidase, Iap family
  Pya:  PAE0888
  Sso:  SSO0725
  Ape:  APE1003
_______

[S] COG4883 Uncharacterized protein conserved in archaea
  Afu:  AF1428
  Mac:  MA1400
  Mth:  MTH101
_______

[S] COG4884 Uncharacterized protein conserved in bacteria
  Fnu:  FN1060_2
  Lin:  lin1862
  Eco:  yfeS_2
_______

[S] COG4885 Uncharacterized protein conserved in archaea
  Afu:  AF2159
  Hbs:  VNG1657H
  Mac:  MA0163
_______

[S] COG4886 Leucine-rich repeat (LRR) protein
  Mac:  MA2301_1
  Sce:  YAL021c_1 YJL005w_1 YKL193c YOR353c YOR373w YPL213w
  Spo:  SPAC4A8.12c SPAC926.06c SPBC1861.08c SPBC19C7.03_1 SPBC887.09c SPCC1739.11c SPCC31H12.08c_1
  Ecu:  ECU05g1560 ECU09g0030 ECU09g0190 ECU09g0200 ECU09g0460 ECU09g1430 ECU11g0170
        ECU11g0770_1
  Cac:  CAC3272_2 CAC3273_2 CAC3274_2 CAC3279_2 CAC3280_2
  Spy:  SPy1361_2 SPy1798
  Lin:  lin0290_1 lin0295 lin0352_1 lin0354_1 lin0372 lin0661 lin0739_1
        lin0740_1 lin1101_1 lin1204_1
  Nos:  alr0124_1
  Eco:  b1933 yddK_2 yedM yedN
  EcZ:  Z2240 Z2242 Z3023 Z3026
  Ecs:  ECs2073 ECs2075 ECs2672 ECs2674
  Ype:  YPCD1.26c YPO1005 YPO1006 YPO1007
  Sty:  STM0800_2 STM2241_2
  Pae:  PA2502_1
  Rso:  RSp0842 RSp0875
_______

[R] COG4887 Uncharacterized metal-binding protein conserved in archaea
  Mac:  MA4239
  Mja:  MJ0455
  Mka:  MK0571
_______

[R] COG4888 Uncharacterized Zn ribbon-containing protein
  Pya:  PAE3047
  Sso:  SSO0260
  Ape:  APE0623
  Sce:  YKL160w
  Spo:  SPAC1B3.02c
  Ecu:  ECU09g0850
_______

[R] COG4889 Predicted helicase
  Cgl:  Cgl3009
  Mtu:  Rv2024c
  MtC:  MT2082
  Lin:  pli0021
  Hpy:  HP0668 HP0669
  jHp:  jhp0612 jhp0613
_______

[S] COG4890 Predicted outer membrane lipoprotein
  Sty:  STM0742
  Vch:  VC1842
  Bme:  BMEII0758
_______

[S] COG4891 Uncharacterized conserved protein
  Mac:  MA3620
  Dra:  DR0721 DR0722
  Cgl:  Cgl1266 Cgl1268
  Ccr:  CC0461
_______

[R] COG4892 Predicted heme/steroid binding protein
  Mac:  MA3727
  Mth:  MTH475
  Cac:  CAP0144
_______

[S] COG4893 Uncharacterized protein conserved in bacteria
  Sty:  STM0287
  Pae:  PA1149
  Bme:  BMEII1078
_______

[S] COG4894 Uncharacterized conserved protein
  Mac:  MA2631
  Cgl:  Cgl2859
  Spn:  SP1384
  Bsu:  BS_yxjI
_______

[S] COG4895 Uncharacterized conserved protein
  Mac:  MA1344
  Dra:  DR2561
  Bsu:  BS_ywbE
_______

[S] COG4896 Uncharacterized protein conserved in bacteria
  Sau:  SAS032
  Lin:  lin1057
  Bsu:  BS_ylaI
_______

[S] COG4897 Uncharacterized protein conserved in bacteria
  Sau:  SA0712
  Lin:  lin2633
  Bsu:  BS_csbA
_______

[S] COG4898 Uncharacterized protein conserved in bacteria
  Spn:  SP1917
  Lin:  lin0147
  Sme:  SMa0277
_______

[S] COG4899 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl0903
  NmA:  NMA1953
  Ccr:  CC3186
_______

[R] COG4900 Predicted metallopeptidase
  Pya:  PAE1999
  Sso:  SSO2833
  Ape:  APE1561
_______

[J] COG4901 Ribosomal protein S25
  Pya:  PAE2188
  Sso:  SSO0425
  Ape:  APE2470
  Sce:  YGR027c YLR333c
  Spo:  SPAC694.05c SPBC3D6.15
  Ecu:  ECU08g1040 ECU08g1070
_______

[S] COG4902 Uncharacterized protein conserved in archaea
  Mac:  MA0421
  Mja:  MJ0754
  Pab:  PAB2327
_______

[K] COG4903 Genetic competence transcription factor
  Sau:  SA0882
  Lin:  lin2427
  Bsu:  BS_comK
_______

[S] COG4904 Uncharacterized protein conserved in archaea
  Afu:  AF0160
  Pya:  PAE1260
  Ape:  APE2612
_______

[S] COG4905 Predicted membrane protein
  Cac:  CAC1666
  Lla:  L191765
  Lin:  lin2818
_______

[S] COG4906 Predicted membrane protein
  Mac:  MA1054
  Mth:  MTH339
  Pab:  PAB1590
_______

[S] COG4907 Predicted membrane protein
  Mac:  MA2663
  Mja:  MJ1577
  Fnu:  FN1127
_______

[R] COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain
  Mac:  MA1194
  Cac:  CAC2004 CAC2005 CAC3554
  Mtu:  Rv2305
  MtC:  MT2362
  Lin:  lin0460
_______

[Q] COG4909 Propanediol dehydratase, large subunit
  Lin:  lin1117
  Sty:  STM2040
  Mlo:  mll6722
_______

[Q] COG4910 Propanediol dehydratase, small subunit
  Lin:  lin1119
  Sty:  STM2042
  Mlo:  mll6721
_______

[S] COG4911 Uncharacterized conserved protein
  Pya:  PAE1241
  Sso:  SSO2148
  Aae:  aq_1797
_______

[L] COG4912 Predicted DNA alkylation repair enzyme
  Mac:  MA3673
  Fnu:  FN0805
  Cgl:  Cgl0917 Cgl1437
  Lla:  L185135
  Lin:  lin2348
  Sme:  SMc00132
  Mlo:  mlr0554
  Rco:  RC0866
_______

[S] COG4913 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2744
  Ype:  YPO0396
  Xfa:  XF2734
_______

[R] COG4914 Predicted nucleotidyltransferase
  Pya:  PAE1744
  Sso:  SSO0171
  Ape:  APE0488
_______

[R] COG4915 5-bromo-4-chloroindolyl phosphate hydrolysis protein
  Lla:  L175712
  Sau:  SA1237
  Lin:  lin2080
  Bsu:  BS_xpaC
_______

[S] COG4916 Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain
  Syn:  slr0658
  Rso:  RSp0130
  Bme:  BMEI1216
_______

[E] COG4917 Ethanolamine utilization protein
  Fnu:  FN0075
  Lin:  lin1109
  Eco:  eutP
  EcZ:  Z3167 Z3717
  Ecs:  ECs2808 ECs3323
  Sty:  STM2056 STM2469
_______

[S] COG4918 Uncharacterized protein conserved in bacteria
  Lla:  L85764
  Lin:  lin0793
  Bsu:  BS_yqkB
_______

[J] COG4919 Ribosomal protein S30
  Pya:  PAE2455
  Sso:  SSO6817
  Ape:  APES068
_______

[S] COG4920 Predicted membrane protein
  Pya:  PAE1710
  Sso:  SSO0403
  Ape:  APE2435
_______

[S] COG4921 Uncharacterized protein conserved in archaea
  Mac:  MA3623
  Mja:  MJ0095
  Mka:  MK0455
_______

[S] COG4922 Uncharacterized protein conserved in bacteria
  Fnu:  FN1222
  Spn:  SP1862
  Rso:  RSc0616
  Atu:  AGc3631
_______

[S] COG4923 Uncharacterized conserved protein
  Mac:  MA1954
  Tma:  TM0947
  Mlo:  mlr4134
_______

[S] COG4924 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2743
  Ype:  YPO0397
  Xfa:  XF2735
_______

[S] COG4925 Uncharacterized conserved protein
  Mac:  MA0413
  Xfa:  XF1751
  Rso:  RSc0630
_______

[S] COG4926 Phage-related protein
  Cac:  CAC0063
  Lla:  L63739_1
  Spy:  SPy0700_1 SPy1446_1
  Lin:  lin2566
_______

[R] COG4927 Predicted choloylglycine hydrolase
  Fnu:  FN0032
  Sau:  SA1739
  Sme:  SMb20028
_______

[R] COG4928 Predicted P-loop ATPase
  Mja:  MJ0182
  Tma:  TM0615 TM1189
  Dra:  DRC0009
  Cgl:  Cgl1683
  Nos:  all7130_2 all7133
  Sty:  STM2238
  Atu:  AGpA30
_______

[S] COG4929 Uncharacterized membrane-anchored protein
  Mac:  MA2053
  Fnu:  FN2001
  Nos:  all1006
  Ype:  YPO2802
  Pmu:  PM0986_2
  Bme:  BMEI1070
_______

[O] COG4930 Predicted ATP-dependent Lon-type protease
  Mac:  MA2364
  Pya:  PAE0243
  Sty:  STM4491
_______

[M] COG4932 Predicted outer membrane protein
  Lla:  L148778 L83620
  Lin:  lin0202 lin0203 lin0879_1 lin2281 lin2282
  Bha:  BH0361 BH2014
_______

[S] COG4933 Uncharacterized conserved protein
  Mka:  MK0523
  Pya:  PAE0017
  Ape:  APE1779
  Bme:  BMEI1226_2
  Uur:  UU132_2 UU236_2
_______

[O] COG4934 Predicted protease
  Tac:  Ta0376 Ta0741m_2 Ta0976
  Tvo:  TVN0148_2 TVN0710 TVN1122 TVN1494
  Sso:  SSO1141 SSO2088 SSO2181 SSO2551
  Cac:  CAC0625
_______

[O] COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases
  Mac:  MA2075_2
  Sce:  YNL238w_2
  Spo:  SPAC22E12.09c_2
  Nos:  all0364_2 alr1381_2 alr4870_2
  Vch:  VCA0065_2 VCA0096_2
_______

[TK] COG4936 Predicted sensor domain
  Cac:  CAC0432_1
  Lin:  lin1114_1
  Sty:  STM2036_1
_______

[J] COG4937 Predicted regulatory domain of prephenate dehydrogenase
  Mac:  MA4595_2
  Mth:  MTH1640_2
  Mja:  MJ0612_2
_______

[S] COG4938 Uncharacterized conserved protein
  Pya:  PAE0007
  Lin:  lin0834
  Vch:  VCA0200
_______

[S] COG4939 Major membrane immunogen, membrane-anchored lipoprotein
  Fnu:  FN1351
  Lin:  lin2786
  Tpa:  TP0171
_______

[U] COG4940 Competence protein ComGF
  Lla:  L169106
  Spy:  SPy0106
  Spn:  SP2048
  Sau:  SA1369
  Lin:  lin1379
  Bsu:  BS_comGF
  Bha:  BH2824
  Hpy:  HP0711_1
  jHp:  jhp0650_1
  Cje:  Cj0015c_1
_______

[K] COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain
  Pae:  PA1351
  Rso:  RSp0636
  Sme:  SMc01150
  Mlo:  mll2869 mll7837 mlr2588 mlr4613
  Ccr:  CC0389 CC1329_2
_______

[D] COG4942 Membrane-bound metallopeptidase
  Fnu:  FN0266
  Eco:  yibP
  EcZ:  ZyibP
  Ecs:  ECs4491
  Ype:  YPO0063
  Sty:  STM3705
  Vch:  VC0335
  Pae:  PA5133
  Hin:  HI0756
  Pmu:  PM1507
  Xfa:  XF2705
  Nme:  NMB1333_2
  NmA:  NMA1547_2
  Atu:  AGc5036
  Sme:  SMc03782
  Bme:  BMEI0213
  Mlo:  mll4002
  Ccr:  CC3434
_______

[T] COG4943 Predicted signal transduction protein containing sensor and EAL domains
  Eco:  yjcC ylaB
  EcZ:  ZyjcC ZylaB
  Ecs:  ECs0510 ECs5043
  Sty:  STM0468 STM4264
  Pae:  PA2200_2
  Xfa:  XF0470
  Bme:  BMEI1448 BMEII0904
_______

[S] COG4944 Uncharacterized protein conserved in bacteria
  Atu:  AGc4120
  Sme:  SMb20532
  Bme:  BMEII0072_2
  Mlo:  mll3492
  Ccr:  CC3252
_______

[G] COG4945 Membrane-anchored protein predicted to be involved in regulation of amylopullulanase
  Tac:  Ta0129_2
  Pab:  PAB0122_2
  Pya:  PAE3090 PAE3454_2
_______

[S] COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system
  Tac:  Ta1490_1
  Tvo:  TVN0895_1
  Pya:  PAE1302_1
  Sso:  SSO2098_1
_______

[S] COG4947 Uncharacterized protein conserved in bacteria
  Spn:  SP0883 SP0884
  Atu:  AGc710
  Mlo:  mll2788
_______

[MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
  Afu:  AF2099
  Hbs:  VNG0442G VNG1074G VNG1837G
  Mka:  MK0568 MK1046
  Tac:  Ta0085m Ta0249 Ta0752 Ta0756 Ta1395
  Tvo:  TVN0168 TVN1194 TVN1346
  Sso:  SSO1258 SSO1303 SSO2665 SSO2998 SSO3124 SSO3198
  Ape:  APE0712
  Tma:  TM0006
  Fnu:  FN1586
  Dra:  DR0044 DR1871 DRB0079
  Cac:  CAC0192
  Cgl:  Cgl0459 Cgl2350
  Mtu:  Rv0553
  MtC:  MT0579
  Mle:  ML2268
  Lla:  L131805
  Sau:  SA1614
  Lin:  lin0197 lin2664
  Bsu:  BS_ycbF BS_yitF BS_ykfB BS_ytfD
  Bha:  BH3006
  Syn:  sll0409
  Nos:  all3532 alr0034
  Eco:  dgoA_2 rspA ycjG yfaW ygcX ygcY
  EcZ:  Z3505 Z4104 ZycjG ZygcX ZygcY
  Ecs:  ECs1904 ECs3135 ECs3647 ECs3648
  Ype:  YPO1567 YPO2341
  Sty:  STM1505 STM1681 STM2273 STM2291 STM2960 STM2961 STM3697
        STM3828 STM3833
  Pae:  PA2215 PA2509 PA4041
  Rso:  RSc1079 RSc2751 RSp0829
  Atu:  AGc2596 AGc3037 AGc463 AGc5098 AGl1320 AGl1470 AGl2751
        AGl3340 AGl3551 AGpA674 AGpA707
  Sme:  SMa0056 SMa0064 SMa0708 SMa1351 SMa1461 SMb20510 SMb21107
        SMb21113 SMc00459
  Bme:  BMEI0966 BMEI1707 BMEI1712
  Mlo:  mll2320 mll2322 mll2323 mll7085 mll7089 mll7149 mll7352
        mll7353 mll7377 mll9372 mlr0803 mlr2330 mlr2605 mlr3365
  Ccr:  CC0532 CC2812 CC3113
_______

[S] COG4949 Uncharacterized membrane-anchored protein conserved in bacteria
  Atu:  AGc1185
  Sme:  SMc00830
  Mlo:  mlr6914
  Ccr:  CC2586
_______

[S] COG4950 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl2381_1
  Eco:  yciW_1
  EcZ:  ZyciW_1
  Ecs:  ECs1860_1
  Ype:  YPO2360_1
  Sty:  STM1701_1
  Rso:  RSc1887_2
  Atu:  AGpA623
  Sme:  SMb20279
_______

[S] COG4951 Uncharacterized protein conserved in bacteria
  Cgl:  Cgl1533_1
  Spn:  SP0574
  EcZ:  Z1129_1 Z1568_1
  Ecs:  ECs1305_1
_______

[M] COG4952 Predicted sugar isomerase
  Tma:  TM1071
  Atu:  AGl2693
  Sme:  SMc02321
  Mlo:  mlr5709
_______

[M] COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC
  Fnu:  FN0580
  Nos:  alr5101
  Eco:  pbpC
  EcZ:  ZpbpC
  Ecs:  ECs3385
  Sty:  STM2531
  Pmu:  PM0644
  Xfa:  XF2235
  Atu:  AGl2286
  Sme:  SMb21297
  Mlo:  mlr1664
  Ccr:  CC3570
  Rco:  RC0249
_______

[S] COG4954 Uncharacterized protein conserved in bacteria
  Rso:  RSp1118
  Atu:  AGc408
  Mlo:  mlr5159
_______

[S] COG4955 Uncharacterized protein conserved in bacteria
  Sau:  SA1314
  Lin:  lin2057
  Bsu:  BS_ypbB
  Bha:  BH1606
_______

[R] COG4956 Integral membrane protein (PIN domain superfamily)
  Dra:  DR1118
  Cac:  CAC3185
  Lla:  L129431
  Sau:  SA0485
  Lin:  lin0266
  Bsu:  BS_yacL
  Bha:  BH0106
  Syn:  slr1972
  Nos:  alr4957
_______

[K] COG4957 Predicted transcriptional regulator
  Atu:  AGc1669
  Sme:  SMa0748 SMa1705 SMc00058
  Bme:  BMEI1364
  Mlo:  mll6119 mll6260 mll9087 mll9315 mlr1025 mlr4210 mlr4692
        mlr7645 mlr7927
  Ccr:  CC0933 CC0949 CC1356
_______

[OU] COG4959 Type IV secretory pathway, protease TraF
  Xfa:  XF2058
  Rso:  RSc2602
  Atu:  AGpT240
  Mlo:  mlr6188 mlr9742
_______

[OU] COG4960 Flp pilus assembly protein, protease CpaA
  Ype:  YPO0695
  Pae:  PA4295
  Pmu:  PM0854
  Rso:  RSc0657 RSp1091
  Atu:  AGc382
  Sme:  SMa1578 SMc04113
  Mlo:  mlr5594
  Ccr:  CC2947
_______

[U] COG4961 Flp pilus assembly protein TadG
  Ype:  YPO0684
  Pae:  PA4294
  Pmu:  PM0843
  Rso:  RSc0649 RSp1090
  Atu:  AGc239 AGc240 AGc2960 AGl1955
  Sme:  SMa1572 SMc00159 SMc04059 SMc04117 SMc04118
  Mlo:  mll0946 mll0947 mll4092 mll5590 mll6476 mll6477 mll7596
        mll8241 mlr7847
  Ccr:  CC0199 CC2734 CC2950 CC2951
_______

[U] COG4962 Flp pilus assembly protein, ATPase CpaF
  Mth:  MTH1702
  Mja:  MJ0781_1 MJ0781_3
  Mka:  MK0707
  Pho:  PH0650_1
  Pab:  PAB1457_1
  Cac:  CAC1980
  Cgl:  Cgl0301
  Mtu:  Rv3659c
  MtC:  MT3759
  Ype:  YPO0690
  Pae:  PA4302
  Pmu:  PM0849
  Xfa:  XF2056
  Rso:  RSc0652 RSc2584 RSp1085
  Atu:  AGc373 AGpT89
  Sme:  SMa1568 SMc02820
  Mlo:  mll0895 mll9612 mlr5602 mlr6397 mlr6483
  Ccr:  CC2942
_______

[U] COG4963 Flp pilus assembly protein, ATPase CpaE
  Ype:  YPO0691
  Pae:  PA4303
  Pmu:  PM0850
  Rso:  RSc0653 RSp1086
  Atu:  AGc376_2
  Sme:  SMa1573_2 SMc04109_2
  Mlo:  mll0896 mll6475_2 mlr5600
  Ccr:  CC2943_2
_______

[U] COG4964 Flp pilus assembly protein, secretin CpaC
  Dra:  DR0774
  Pae:  PA4304
  Pmu:  PM0852
  Rso:  RSc0655 RSp1087
  Atu:  AGc379
  Sme:  SMa0163 SMc04111
  Mlo:  mll0899 mll6479 mlr5597 mlr6335
  Ccr:  CC2945
_______

[U] COG4965 Flp pilus assembly protein TadB
  Cgl:  Cgl0302
  Mtu:  Rv3658c
  MtC:  MT3758
  Ype:  YPO0689
  Pae:  PA4301
  Pmu:  PM0848
  Rso:  RSc0651 RSp1084
  Atu:  AGc372
  Sme:  SMa1564 SMc02821
  Mlo:  mll0894 mlr5603 mlr6484
  Ccr:  CC2941
_______

[NU] COG4966 Tfp pilus assembly protein PilW
  Pae:  PA4552
  Xfa:  XF0030 XF0475
  Nme:  NMB0888
  NmA:  NMA1108
  Rso:  RSc0720 RSc0726 RSc2677 RSp1290
_______

[NU] COG4967 Tfp pilus assembly protein PilV
  Eco:  ppdC
  EcZ:  ZppdC
  Ecs:  ECs3680
  Ype:  YPO1017
  Sty:  STM2997
  Vch:  VC0861
  Pae:  PA4551
  Xfa:  XF0029 XF0474
  Nme:  NMB0887
  NmA:  NMA1107
  Rso:  RSc0727 RSc2678 RSp1291
_______

[NU] COG4968 Tfp pilus assembly protein PilE
  Vch:  VC0857
  Pae:  PA4556
  Xfa:  XF0033 XF0479
  Nme:  NMB0547 NMB2016
  NmA:  NMA0424 NMA0726
  Rso:  RSc0717 RSc0723 RSc2680 RSp1287
_______

[NU] COG4969 Tfp pilus assembly protein, major pilin PilA
  Aae:  aq_1433 aq_1434
  Eco:  ppdD
  EcZ:  ZppdD
  Ecs:  ECs0112
  Ype:  YPO3425
  Sty:  STM0144
  Vch:  VC2423
  Pae:  PA0659_3 PA4525
  Hin:  HI0299
  Pmu:  PM0084
  Xfa:  XF0487 XF0538 XF0539 XF1791 XF1792 XF2539 XF2542
  Nme:  NMB0018 NMB0019 NMB0020 NMB0021 NMB0022 NMB0023 NMB0024
        NMB0025 NMB0026 NMB0890
  NmA:  NMA0264 NMA0265 NMA0266 NMA0267 NMA0268 NMA0269 NMA0270
        NMA0271 NMA0272 NMA1110
  Rso:  RSc0557 RSc0558
_______

[NU] COG4970 Tfp pilus assembly protein FimT
  Vch:  VC0858
  Pae:  PA4549 PA4550
  Xfa:  XF0028 XF0473 XF0966 XF1520
  Nme:  NMB0886
  NmA:  NMA1106
  Rso:  RSc0716 RSc0722 RSc2679 RSp1292
  Mlo:  mlr6822
_______

[NU] COG4972 Tfp pilus assembly protein, ATPase PilM
  Dra:  DR0770
  Syn:  slr1274
  Nos:  alr1028
  Vch:  VC2634
  Pae:  PA5044
  Xfa:  XF0369
  Nme:  NMB1808
  NmA:  NMA0654
  Rso:  RSc2975
_______

[L] COG4973 Site-specific recombinase XerC
  Eco:  xerC
  EcZ:  ZxerC
  Ecs:  ECs4741
  Ype:  YPO3843
  Sty:  STM3949
  Vch:  VC0128
  Pae:  PA5280
  Hin:  HI0676
  Pmu:  PM1701
  Xfa:  XF1483
  Nme:  NMB1868
  NmA:  NMA0588
  Rso:  RSc0052
_______

[L] COG4974 Site-specific recombinase XerD
  Fnu:  FN1071
  Cac:  CAC2066
  Cgl:  Cgl1385
  Mtu:  Rv1701
  MtC:  MT1740
  Mle:  ML1365
  Sau:  SA1095 SA1328
  Lin:  lin1316 lin2069
  Bsu:  BS_codV BS_ripX
  Bha:  BH1529 BH2465
  Eco:  xerD
  EcZ:  ZxerD
  Ecs:  ECs3766
  Ype:  YPO0892
  Sty:  STM3044
  Vch:  VC2419
  Pae:  PA3738
  Hin:  HI0309
  Pmu:  PM0093
  Xfa:  XF1425
  Nme:  NMB0751
  NmA:  NMA0964
  Rso:  RSc2544 RSp0090
  Atu:  AGl2396
  Sme:  SMc00691
  Bme:  BMEI0040
  Mlo:  mlr3575
  Ccr:  CC3006
  Rpr:  RP361
  Rco:  RC0491
  Tpa:  TP0391 TP0395
_______

[G] COG4975 Putative glucose uptake permease
  Lla:  L140621
  Spy:  SPy2205
  Sau:  SA0260 SA2053
  Lin:  lin0212 lin0215 lin0444
  Bsu:  BS_ycxE
_______

[R] COG4976 Predicted methyltransferase (contains TPR repeat)
  Atu:  AGc3455 AGc866
  Sme:  SMc00134 SMc02241
  Bme:  BMEI0923
  Mlo:  mlr5485
  Ccr:  CC2448
_______

[K] COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
  EcZ:  Z0442 Z2164
  Ecs:  ECs0399 ECs2143
  Pae:  PA0893 PA1850 PA3782 PA4184 PA4436 PA5380 PA5389
  Rso:  RSc1098 RSc1108 RSp0044 RSp0054 RSp0068
  Atu:  AGc3247 AGc453 AGl1109 AGl1272 AGl2735 AGpA562 AGpAbx241
  Sme:  SMa1476 SMa1725 SMb20055 SMb20215 SMc00256 SMc01636 SMc02609
        SMc04169
  Bme:  BMEI0685 BMEI1615
  Mlo:  mll2026 mll3844 mll4501 mll5038 mll5195 mll6236 mlr1251
        mlr2766 mlr6241 mlr6509
  Ccr:  CC2960 CC3367
_______

[KT] COG4978 Transcriptional regulator, effector-binding domain/component
  Mac:  MA0499 MA0516 MA0732 MA0733 MA0989_2
  Mth:  MTH1066 MTH628
  Pya:  PAE1796
  Cac:  CAC3443_2
  Cgl:  Cgl1396 Cgl1893
  Bsu:  BS_bltR_2 BS_bmrR_2 BS_ydfL_2
  Bha:  BH3496_2 BH4047
  Nos:  all0345_2
_______

[R] COG4980 Gas vesicle protein
  Cac:  CAC0956
  Sau:  SA1657
  Lin:  lin1642 lin2320
  Bsu:  BS_yhaH BS_ytxH
  Bha:  BH1186 BH2684 BH3244
  Syn:  sll0268
  Nos:  all2547
_______

[I] COG4981 Enoyl reductase domain of yeast-type FAS1
  Sce:  YKL182w_2
  Spo:  SPAC926.09c_2
  Cgl:  Cgl0813_2 Cgl2444_2
  Mtu:  Rv2524c_2
  MtC:  MT2600_2
  Mle:  ML1191_2
_______

[I] COG4982 3-oxoacyl-[acyl-carrier protein] reductase
  Sce:  YPL231w_2
  Spo:  SPAC4A8.11c_2
  Cgl:  Cgl0813_5 Cgl2444_5
  Mtu:  Rv2524c_5
  MtC:  MT2600_5
  Mle:  ML1191_5
_______

[S] COG4983 Uncharacterized conserved protein
  Hbs:  VNG0215C_1
  Mac:  MA1556
  Lin:  lin2587_1
  Mlo:  mll0485
_______

[S] COG4984 Predicted membrane protein
  Fnu:  FN2002
  Ype:  YPO2801
  Pmu:  PM0986_1
_______

[P] COG4985 ABC-type phosphate transport system, auxiliary component
  Ype:  YPO2834_1
  Vch:  VC0725_1
  Pae:  PA5367_1
_______

[P] COG4986 ABC-type anion transport system, duplicated permease component
  Tac:  Ta1177
  Tvo:  TVN0387
  Pya:  PAE1064
  Sso:  SSO2468
  Xfa:  XF0411
  Rso:  RSc3371
_______

[CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
  Lla:  L112352
  Sau:  SA0640
  Lin:  lin2863
  Bsu:  BS_cydD
  Bha:  BH3972
  Eco:  cydC
  EcZ:  ZcydC
  Ecs:  ECs0971
  Ype:  YPO1372
  Sty:  STM0956
  Vch:  VC1180
  Hin:  HI1156
  Pmu:  PM0571
  Atu:  AGl1531
  Bme:  BMEII0761
  Ccr:  CC0760
_______

[CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
  Fnu:  FN1819
  Cgl:  Cgl1123
  Mtu:  Rv1621c
  MtC:  MT1657
  Lla:  L110479
  Spy:  SPy1791
  Sau:  SA0639
  Lin:  lin1097 lin2864
  Bsu:  BS_cydC
  Bha:  BH3971
  Eco:  cydD
  EcZ:  ZcydD
  Ecs:  ECs0972
  Ype:  YPO1373
  Sty:  STM0957
  Vch:  VC1181
  Hin:  HI0663m HI1157
  Pmu:  PM0572 PM1474
  Atu:  AGl1532
  Bme:  BMEII0762
  Ccr:  CC0761
_______

[R] COG4989 Predicted oxidoreductase
  Cac:  CAC3378
  Spn:  SP0791
  Sau:  SA0643
  Lin:  lin0643
  Bsu:  BS_ycsN
  Bha:  BH3927
  Eco:  ydhF
  EcZ:  Z2664
  Ecs:  ECs2356
  Ype:  YPO2375
  Sty:  STM1439
  Vch:  VCA0859
  Atu:  AGl3080
  Mlo:  mll2491
_______

[S] COG4990 Uncharacterized protein conserved in bacteria
  Lla:  L87107_2 L91998
  Sau:  SA2224
  Lin:  lin0018_2 lin0732
  Bsu:  BS_yvpB
_______

[S] COG4991 Uncharacterized protein with a bacterial SH3 domain homologue
  Cac:  CAC2729
  Bsu:  BS_yraI BS_yraJ
  Atu:  AGc4006_1 AGl2640gl AGpA524
  Sme:  SMa2297 SMc00062 SMc01590_1
  Bme:  BMEI0502 BMEI1215
  Mlo:  mlr4377_1
_______

[E] COG4992 Ornithine/acetylornithine aminotransferase
  Afu:  AF0080 AF1815
  Mac:  MA0119
  Mth:  MTH1337
  Mja:  MJ0721
  Mka:  MK1606
  Pho:  PH1716
  Pab:  PAB2440
  Pya:  PAE2515
  Sso:  SSO0160
  Ape:  APE1464
  Sce:  YLR438w YOL140w
  Spo:  SPAC27F1.05c SPBC21C3.08c SPCC777.09c
  Aae:  aq_023
  Tma:  TM1785
  Dra:  DR0794 DR1415
  Cac:  CAC2388
  Cgl:  Cgl1364
  Mtu:  Rv1655 Rv2321c Rv2322c
  MtC:  MT1693
  Mle:  ML1409
  Lla:  L0106
  Sau:  SA0179 SA0818
  Lin:  lin1630
  Bsu:  BS_argD BS_rocD
  Bha:  BH2897 BH3943
  Syn:  slr1022
  Nos:  alr1080
  Eco:  argD cstC ygjG
  EcZ:  ZargD ZcstC ZygjG
  Ecs:  ECs2454 ECs3955 ECs4210
  Ype:  YPO1962
  Sty:  STM1303 STM3218 STM3468
  Buc:  BU534
  Vch:  VC2618
  Pae:  PA0530 PA0895
  Pmu:  PM0344
  Xfa:  XF1427
  Nme:  NMB1371
  NmA:  NMA1584
  Rso:  RSc0159 RSc2435 RSp0200_2
  Cje:  Cj0227
  Atu:  AGc752
  Sme:  SMc02138
  Bme:  BMEI1621 BMEII0441
  Mlo:  mll1261 mlr5646 mlr6714
  Ccr:  CC0584 CC2243
_______

[G] COG4993 Glucose dehydrogenase
  Eco:  gcd
  EcZ:  Zgcd
  Ecs:  ECs0128
  Sty:  STM0169
  Pae:  PA1982 PA2290
  Atu:  AGl1436 AGl2936
  Sme:  SMb20173 SMc00110
  Mlo:  mll1500
_______

[S] COG4994 Uncharacterized protein conserved in bacteria
  Cac:  CAC2557
  Lin:  lin1102
  Rso:  RSc1301
_______

[S] COG4995 Uncharacterized protein conserved in bacteria
  Syn:  sll0499_2 sll0638 slr0380 slr1753_3 slr1968_2
  Nos:  all0360 all1176_2 all1820_2 all2170_2 all4078_2 all4926_3 all5311_2
        all7234_2 alr0963_2 alr1398_2 alr7318_2
  Ccr:  CC0601
_______

[R] COG4996 Predicted phosphatase
  Pya:  PAE0971
  Sso:  SSO0580
  Ape:  APE0023
_______

[S] COG4997 Uncharacterized conserved protein
  Mac:  MA0781_1
  Fnu:  FN0639
  Cac:  CAC2823
  Rco:  RC0196
_______

[L] COG4998 Predicted endonuclease (RecB family)
  Mka:  MK1235
  Pya:  PAE0739
  Ape:  APE2333
_______

[T] COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases
  Eco:  barA_2
  EcZ:  ZbarA_2
  Ecs:  ECs3646_2
  Ype:  YPO3381_2
  Sty:  STM2958_2
  Vch:  VC2453_2
_______

[T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
  Aae:  aq_905
  Nme:  NMB0114
  NmA:  NMA0160
  Rso:  RSc0077
  Atu:  AGc2667
  Sme:  SMc01044
  Bme:  BMEI0867
  Mlo:  mlr0399
  Ccr:  CC1742
  Rpr:  RP614
  Rco:  RC0948
_______

[T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
  Rso:  RSc1545
  Atu:  AGl1027
  Ccr:  CC0896
_______

[T] COG5002 Signal transduction histidine kinase
  Dra:  DR2244
  Lla:  L0124
  Spy:  SPy0529
  Spn:  SP1226
  Sau:  SA0018
  Lin:  lin0316
  Bsu:  BS_yycG
  Bha:  BH4026
_______

[R] COG5003 Mu-like prophage protein gp37
  Ecs:  ECs4977
  Hin:  HI1509
  Nme:  NMB1102_1
  NmA:  NMA1843_1
_______

[R] COG5004 P2-like prophage tail protein X
  Sty:  STM2717
  Pae:  PA0627
  Xfa:  XF0732 XF2480
  Rso:  RSc1934
_______

[R] COG5005 Mu-like prophage protein gpG
  Ecs:  ECs4972
  Hin:  HI1503 HI1568
  NmA:  NMA1316 NMA1849
_______

[R] COG5006 Predicted permease, DMT superfamily
  Dra:  DR1295
  Cgl:  Cgl0589 Cgl2095
  Eco:  ybiF
  EcZ:  ZybiF
  Ecs:  ECs0891
  Ype:  YPO2507
  Sty:  STM0832
  Vch:  VC1311
  Pae:  PA1360
  Rso:  RSc2802
  Mlo:  mll1936 mlr1493
  Ccr:  CC3468
_______

[K] COG5007 Predicted transcriptional regulator, BolA superfamily
  Eco:  yrbA
  EcZ:  ZyrbA
  Ecs:  ECs4069
  Ype:  YPO3570
  Sty:  STM3308
  Buc:  BU385
  Vch:  VC2515
  Pae:  PA4451
  Hin:  HI1082
  Pmu:  PM0179
  Xfa:  XF1414
  Nme:  NMB0009
  NmA:  NMA0256
  Rso:  RSc2954
_______

[NU] COG5008 Tfp pilus assembly protein, ATPase PilU
  Vch:  VC0463
  Pae:  PA0396
  Xfa:  XF1632
  Nme:  NMB0051 NMB0768
  NmA:  NMA0219 NMA0979
  Rso:  RSc2681
_______

[M] COG5009 Membrane carboxypeptidase/penicillin-binding protein
  Aae:  aq_624
  Eco:  mrcA
  EcZ:  ZmrcA
  Ecs:  ECs4238
  Ype:  YPO0145
  Sty:  STM3493
  Vch:  VC2635
  Pae:  PA5045
  Hin:  HI0440
  Pmu:  PM1230
  Xfa:  XF0368
  Nme:  NMB1807
  NmA:  NMA0655
  Rso:  RSc2976
  Atu:  AGc2475
  Sme:  SMa2294 SMc01334
  Bme:  BMEI1055
  Mlo:  mlr0215
  Ccr:  CC1875
  Rpr:  RP807
  Rco:  RC1245
  Tpa:  TP0705
  Bbu:  BB0732
_______

[U] COG5010 Flp pilus assembly protein TadD, contains TPR repeats
  Ype:  YPO0687
  Pae:  PA4299
  Pmu:  PM0846
  Rso:  RSp1082
  Atu:  AGc369
  Sme:  SMa0166 SMc02824
  Mlo:  mll0888 mll5605 mlr6487
  Ccr:  CC2938
_______

[S] COG5011 Uncharacterized protein conserved in bacteria
  Tma:  TM0469
  Cac:  CAC1255
  Syn:  sll1084_2
  Nos:  alr4330_2
_______

[R] COG5012 Predicted cobalamin binding protein
  Afu:  AF0006 AF0011
  Mac:  MA0145 MA0456 MA0527 MA0529 MA0859_1 MA0931 MA0934
        MA1617 MA2424 MA2971 MA4164 MA4364 MA4384_1 MA4391
        MA4558_1
  Mth:  MTH124
  Fnu:  FN1862
  Sme:  SMc04331
  Mlo:  mlr1231
_______

[C] COG5013 Nitrate reductase alpha subunit
  Pya:  PAE3611
  Ape:  APE1288
  Cgl:  Cgl1163
  Mtu:  Rv1161 Rv1736c_1
  MtC:  MT1198 MT1778_1
  Sau:  SA2185
  Bsu:  BS_narG
  Eco:  narG narZ
  EcZ:  ZnarG ZnarZ
  Ecs:  ECs1729 ECs2071
  Sty:  STM1577 STM1764
  Pae:  PA3875
  Rso:  RSp0974
  Bme:  BMEII0949 BMEII0950
_______

[R] COG5014 Predicted Fe-S oxidoreductase
  Mka:  MK0277
  Pya:  PAE3093
  Tma:  TM0948
_______

[S] COG5015 Uncharacterized conserved protein
  Mac:  MA0739_1
  Fnu:  FN0390
  Cac:  CAC2569
  Cje:  Cj0436
_______

[C] COG5016 Pyruvate/oxaloacetate carboxyltransferase
  Afu:  AF1252m
  Mac:  MA0674_1
  Mth:  MTH1107_1
  Mja:  MJ1231_1
  Pho:  PH0834_1
  Aae:  aq_1520_1 aq_1614_1
  Tma:  TM0128
  Fnu:  FN1376
  Spy:  SPy1174 SPy1191
  Sty:  STM0055_1 STM3352_1
  Vch:  VC0550_1 VC0793m_1
  Pae:  PA5435_1
  Pmu:  PM1422_1
  Cje:  Cj0933c
  Tpa:  TP0056_1
_______

[S] COG5017 Uncharacterized conserved protein
  Mac:  MA2172
  Sce:  YGL047w
  Spo:  SPAC56E4.02c
  Nos:  all2286
_______

[R] COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease
  Spo:  SPBC30B4.08
  Bsu:  BS_kapD
  Pae:  PA1575
_______

[DZ] COG5019 Septin family protein
  Sce:  YCR002c YDL225w YDR218c YGR059w YHR107c YJR076c YLR314c
  Spo:  SPAC24C9.15c SPAC4F10.11 SPAC821.06 SPAC9G1.11c SPBC19F8.01c SPBC543.01c SPCC188.12
  Ecu:  ECU01g1370 ECU09g0820 ECU11g1950
_______

[G] COG5020 Mannosyltransferase
  Sce:  YBR199w YBR205w YDR483w YIL085c YJL139c YKR061w YNL029c
        YOR099w YPL053c
  Spo:  SPAC959.04c SPBC16H5.09c SPBC1773.08c SPBC19C7.12c SPBC32H8.08c SPCC777.07
  Ecu:  ECU04g1130
_______

[O] COG5021 Ubiquitin-protein ligase
  Sce:  YDR457w YER125w YGL141w YJR036c YKL010c
  Spo:  SPAC11G7.02 SPAC12B10.01c SPAC167.07c SPAC1805.15c SPAC19D5.04 SPBC16E9.11c SPBP8B7.27
  Ecu:  ECU04g0490 ECU10g1380
_______

[Z] COG5022 Myosin heavy chain
  Sce:  YAL029c YHR023w YKL129c YMR109w YOR326w
  Spo:  SPAC4A8.05c SPBC146.13c SPBC2D10.14c SPCC1919.10c SPCC645.05c
  Ecu:  ECU04g1000 ECU09g1970
_______

[Z] COG5023 Tubulin
  Sce:  YFL037w YLR212c YML085c YML124c
  Spo:  SPBC16A3.15c SPBC26H8.07c SPBC32F12.04 SPBC800.05c
  Ecu:  ECU03g0820i ECU07g1190 ECU08g0670
_______

[D] COG5024 Cyclin
  Sce:  YAL040c YDL155w YGR108w YGR109c YLR210w YMR199w YPL256c
        YPR119w YPR120c
  Spo:  SPAPB2B4.03 SPBC16E9.17c SPBC19F5.01c SPBC582.03 SPCC4E9.02
  Ecu:  ECU08g0260 ECU09g1030
_______

[K] COG5025 Transcription factor of the Forkhead/HNF3 family
  Sce:  YCR065w YIL131c YNL068c YPR104c
  Spo:  SPAC1142.08 SPBC16G5.15c SPBC32H8.11 SPBC4C3.05
  Ecu:  ECU01g0470 ECU11g1330
_______

[G] COG5026 Hexokinase
  Sce:  YCL040w YDR516c YFR053c YGL253w YLR446w
  Spo:  SPAC24H6.04 SPAC4F8.07c
  Ecu:  ECU11g1540
  Tpa:  TP0505
_______

[B] COG5027 Histone acetyltransferase (MYST family)
  Sce:  YBL052c YMR127c YOR244w
  Spo:  SPAC17G8.13c SPAC637.12c
  Ecu:  ECU09g1310 ECU10g0660
_______

[U] COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3
  Sce:  YHR098c YIL109c YNL049c
  Spo:  SPAC22F8.08 SPBC4.03c
  Ecu:  ECU02g1230 ECU02g1460
_______

[O] COG5029 Prenyltransferase, beta subunit
  Sce:  YDL090c YGL155w YPR176c
  Spo:  SPAC167.02 SPAC17G6.04c SPAC2E1P5.04c
  Ecu:  ECU08g1290
_______

[U] COG5030 Clathrin adaptor complex, small subunit
  Sce:  YJL024c YJR058c YLR170c
  Spo:  SPAC30D11.05 SPAP27G11.06c SPBC685.04c
  Ecu:  ECU08g0150
_______

[H] COG5031 Uncharacterized protein involved in ubiquinone biosynthesis
  Sce:  YDR204w
  Spo:  SPAC1687.12c
  Nos:  all2528 alr2814 alr4151 alr8543
_______

[TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family
  Sce:  YBL088c YBR136w YHR099w YJR066w YKL203c YLR240w YLR305c
        YNL267w
  Spo:  SPAC1F5.11c SPAC22E12.16c SPAC458.05 SPBC216.05 SPBC216.07c SPBC30D10.10c SPBC577.06c
        SPBP16F5.03c SPCC23B6.03c
  Ecu:  ECU02g1130 ECU03g1100 ECU05g0540 ECU10g0590 ECU11g0450
_______

[K] COG5033 Transcription initiation factor IIF, auxiliary subunit
  Sce:  YNL107w YOR213c YPL129w
  Spo:  SPAC17G8.07 SPAC22H12.02
  Ecu:  ECU03g1600
_______

[B] COG5034 Chromatin remodeling protein, contains PhD zinc finger
  Sce:  YHR090c YNL097c YOR064c
  Spo:  SPAC3G9.08 SPBC1709.11c
  Ecu:  ECU10g1090
_______

[DKT] COG5035 Cell cycle control protein
  Sce:  YCR094w YNL323w YNR048w
  Spo:  SPBC11B10.07c SPBC1773.11c
  Ecu:  ECU06g1450
_______

[P] COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation
  Sce:  YFL004w_1 YJL012c YPL019c_1
  Spo:  SPAC14C4.11_1 SPCC1322.14c_1
  Ecu:  ECU06g1420i_1
_______

[TG] COG5037 Gluconate transport-inducing protein
  Sce:  YEL007w YHR177w
  Spo:  SPAC1751.01c SPAC31G5.11
  Ecu:  ECU02g1040 ECU07g0250
_______

[R] COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain
  Sce:  YML072c YNL087w YOR086c
  Spo:  SPAPYUK71.03c SPCC962.01 SPCP31B10.06
  Ecu:  ECU01g1250
_______

[GM] COG5039 Exopolysaccharide biosynthesis protein
  Spo:  SPAC8F11.10c
  Bsu:  BS_yveS BS_yvfF BS_yxaB
  Nos:  all3271 alr3066
_______

[T] COG5040 14-3-3 family protein
  Sce:  YDR099w YER177w
  Spo:  SPAC17A2.13c SPAC8E11.02c
  Ecu:  ECU03g1010
_______

[TDK] COG5041 Casein kinase II, beta subunit
  Sce:  YGL019w YOR039w
  Spo:  SPAC1851.03 SPBC2G5.02c
  Ecu:  ECU10g1200i
_______

[F] COG5042 Purine nucleoside permease
  Spo:  SPCC285.05
  Rso:  RSc0798 RSc0799
  Bme:  BMEI0469
  Ccr:  CC0187
_______

[U] COG5043 Vacuolar protein sorting-associated protein
  Sce:  YLL040c
  Spo:  SPBC16C6.02c SPBC21C3.01c SPBC31F10.18c
  Ecu:  ECU04g0690
_______

[O] COG5044 RAB proteins geranylgeranyltransferase component A (RAB escort protein)
  Sce:  YER136w YOR370c
  Spo:  SPAC22H10.12c SPBC15C4.03
  Ecu:  ECU02g1410 ECU11g0350
_______

[J] COG5045 Ribosomal protein S10E
  Sce:  YMR230w YOR293w
  Spo:  SPAC31G5.17c SPBP22H7.08
  Ecu:  ECU04g1355
_______

[O] COG5046 Protein involved in Mod5 protein sorting
  Sce:  YDR005c
  Spo:  SPAC31G5.12c
  Ecu:  ECU07g1840 ECU10g0060 ECU11g2080i
_______

[U] COG5047 Vesicle coat complex COPII, subunit SEC23
  Sce:  YHR035w YPR181c
  Spo:  SPBC776.04 SPCC31H12.07
  Ecu:  ECU11g0790
_______

[R] COG5048 FOG: Zn-finger
  Sce:  YBR066c YDL048c YDR043c YDR096w_2 YDR146c YDR216w YDR253c
        YER028c YER130c YER169w_2 YGL035c YGL209w YGL254w YGR067c
        YHL027w YJL056c YJR127c YKL062w YLR131c YLR375w YML081w
        YMR037c YMR070w YMR182c YNL027w YOR113w YPL038w YPL230w
        YPR013c YPR015c YPR022c YPR186c
  Spo:  SPAC1039.05c SPAC11D3.17 SPAC144.02 SPAC144.09c SPAC25B8.19c SPAC3H1.11 SPAC4G8.13c
        SPAC6F12.02 SPAC6G10.12c SPBC1198.04c SPBC1D7.02 SPBP4H10.09
  Ecu:  ECU03g0790 ECU05g0610 ECU06g1150 ECU08g0560
  jHp:  jhp0330
_______

[LDA] COG5049 5'-3' exonuclease
  Sce:  YGL173c YOR048c
  Spo:  SPAC17A5.14 SPAC26A3.12c
  Ecu:  ECU09g0760
_______

[I] COG5050 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases
  Sce:  YHR123w YNL130c
  Spo:  SPAC22A12.10
  Ecu:  ECU11g0620
  Tpa:  TP0671
_______

[J] COG5051 Ribosomal protein L36E
  Sce:  YMR194w YPL249c-a
  Spo:  SPBC405.07 SPCC970.05
  Ecu:  ECU06g1120
_______

[U] COG5052 Protein involved in membrane traffic
  Sce:  YPR028w
  Spo:  SPBC30D10.09c SPCC830.08c
  Ecu:  ECU05g1180 ECU09g1950
_______

[J] COG5053 Translation initiation factor 4E (eIF-4E)
  Sce:  YOL139c
  Spo:  SPAC16E8.15 SPBC1709.18
  Ecu:  ECU08g0900 ECU11g1350
_______

[O] COG5054 Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins
  Sce:  YGR029w YPR037c
  Spo:  SPAC3G6.08 SPBC146.04
  Ecu:  ECU06g1090
_______

[L] COG5055 Recombination DNA repair protein (RAD52 pathway)
  Sce:  YDL059c YML032c
  Spo:  SPAC30D11.10 SPBC119.14
  Ecu:  ECU09g0930
_______

[I] COG5056 Acyl-CoA cholesterol acyltransferase
  Sce:  YCR048w YNR019w
  Spo:  SPAC13G7.05 SPCP1E11.05c
  Ecu:  ECU10g0300
_______

[DT] COG5057 Phosphotyrosyl phosphatase activator
  Sce:  YIL153w YPL152w
  Spo:  SPAC1782.05 SPAC4F10.04
  Ecu:  ECU06g0720
_______

[U] COG5058 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor
  Sce:  YHL003c YKL008c
  Spo:  SPAC1A6.09c SPBC3E7.15c
  Ecu:  ECU08g1350
_______

[Z] COG5059 Kinesin-like protein
  Sce:  YBL063w YEL061c YGL216w YKL079w YPL155c YPR141c
  Spo:  SPAC144.14 SPAC1834.07 SPAC25G10.07c SPAC3A11.14c SPAC664.10 SPBC15D4.01c SPBC1604.20c
        SPBC2D10.21c SPBC2F12.13 SPBC649.01c
  Ecu:  ECU05g0060_1 ECU08g0890 ECU10g0320 ECU10g1000 ECU11g0470 ECU11g2020
_______

[OU] COG5061 Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation
  Sce:  YML130c
  Spo:  SPBC4F6.16c SPCC1450.14c
  Ecu:  ECU04g0170
_______

[S] COG5062 Uncharacterized membrane protein
  Sce:  YJL091c
  Spo:  SPAC144.10c
  Ecu:  ECU05g0690 ECU09g0060
_______

[R] COG5063 CCCH-type Zn-finger protein
  Sce:  YDR151c YLR136c
  Spo:  SPBC1718.07c
  Ecu:  ECU01g0830
_______

[U] COG5064 Karyopherin (importin) alpha
  Sce:  YNL189w
  Spo:  SPBC1604.08c SPCC962.03c
  Ecu:  ECU11g1760
_______

[P] COG5065 Protein involved in inorganic phosphate transport
  Sce:  YBR106w
  Spo:  SPAC589.06c SPBC16H5.04
  Ecu:  ECU11g1640
_______

[U] COG5066 VAMP-associated protein involved in inositol metabolism
  Sce:  YER120w
  Spo:  SPAC17C9.12 SPBC16G5.05c
  Ecu:  ECU11g0640
_______

[LD] COG5067 Protein kinase essential for the initiation of DNA replication
  Sce:  YDR052c
  Spo:  SPBC1778.04 SPCC550.13
  Ecu:  ECU05g1330
_______

[K] COG5068 Regulator of arginine metabolism and related MADS box-containing transcription factors
  Sce:  YBR182c YMR042w YMR043w YPL089c
  Spo:  SPAC11E3.06 SPBC19G7.06 SPBC317.01
  Ecu:  ECU07g1740
_______

[Z] COG5069 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily)
  Sce:  YDR129c
  Spo:  SPAC15A10.08 SPBC1778.06c
  Ecu:  ECU09g0290
_______

[GOU] COG5070 Nucleotide-sugar transporter
  Sce:  YER039c YER039c-a YGL225w
  Spo:  SPAC144.18
  Ecu:  ECU03g0150
_______

[O] COG5071 26S proteasome regulatory complex component
  Sce:  YDL147w
  Spo:  SPAC1420.03 SPAPB8E5.02c
  Ecu:  ECU05g1080
_______

[D] COG5072 Serine/threonine kinase of the haspin family
  Sce:  YBL009w YGL021w
  Spo:  SPAC23C4.03
  Ecu:  ECU03g0890
_______

[U] COG5073 Vacuolar import and degradation protein
  Sce:  YBR105c YGR066c
  Spo:  SPAC3H1.14 SPAP8A3.13c
  Ecu:  ECU03g0570
_______

[U] COG5074 t-SNARE complex subunit, syntaxin
  Sce:  YMR183c YPL232w
  Spo:  SPCC825.03c
  Ecu:  ECU11g1560
_______

[S] COG5075 Uncharacterized conserved protein
  Sce:  YLR270w YOR173w
  Spo:  SPBP4H10.20
  Ecu:  ECU10g1710
_______

[BK] COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain
  Sce:  YBR081c YDL070w YGR056w YGR252w YIL126w_2 YKR008w YLR357w
        YLR399c YOR290c_2
  Spo:  SPAC1250.01_2 SPAC1952.05 SPAC631.02 SPBC1734.15 SPBC21D10.10 SPBC25H2.11c SPBC4B4.03
        SPCC1620.14c_2
  Ecu:  ECU08g1560 ECU08g1640 ECU10g0760_2 ECU10g1430
_______

[O] COG5077 Ubiquitin carboxyl-terminal hydrolase
  Sce:  YMR304w
  Spo:  SPBC713.02c SPCC188.08c
  Ecu:  ECU03g0580
_______

[O] COG5078 Ubiquitin-protein ligase
  Sce:  YBR082c YDL064w YDR054c YDR059c YDR092w YDR177w YEL012w
        YER100w YGL058w YGL087c YGR133w YLR306w YMR022w YOR339c
  Spo:  SPAC10F6.05c SPAC11E3.04c SPAC1250.03 SPAC18B11.07c SPAC30D11.13 SPBC1105.09 SPBC119.02
        SPBC1198.09 SPBC211.07c SPBC2D10.20 SPBP16F5.04 SPCC1259.15c SPCC338.05c SPCC777.10c
  Ecu:  ECU01g0940 ECU01g1010 ECU04g0630 ECU08g0860 ECU10g0940 ECU10g1310i ECU10g1540
        ECU11g1990
_______

[UD] COG5079 Nuclear protein export factor
  Sce:  YDR159w
  Spo:  SPCC576.05 SPCC70.06
  Ecu:  ECU04g1260
_______

[U] COG5080 Rab GTPase interacting factor, Golgi membrane protein
  Sce:  YGL198w YGR172c
  Spo:  SPAC644.13c SPCC61.04c
  Ecu:  ECU03g0590
_______

[S] COG5081 Predicted membrane protein
  Sce:  YGR038w YLR350w
  Spo:  SPBC119.09c
  Ecu:  ECU11g1150
_______

[OU] COG5082 Arginine methyltransferase-interacting protein, contains RING Zn-finger
  Sce:  YDL175c YIL079c YLR116w_2 YNL255c
  Spo:  SPAC13D6.02c SPAC683.02c SPBP35G2.08c SPCC962.06c_2
  Ecu:  ECU11g0650
_______

[R] COG5083 Uncharacterized protein involved in plasmid maintenance
  Sce:  YMR165c_1
  Spo:  SPAC1952.13
  Ecu:  ECU02g0200
  Cac:  CAC2938
_______

[R] COG5084 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins
  Sce:  YPL054w YPR107c
  Spo:  SPAC227.08c SPAC3A11.02 SPBC15D4.10c SPBC337.12 SPCC1739.01
  Ecu:  ECU01g0430 ECU08g1630 ECU10g1505
_______

[S] COG5085 Predicted membrane protein
  Sce:  YGL247w YHR036w
  Spo:  SPAC8F11.06
  Ecu:  ECU05g0890
_______

[S] COG5086 Uncharacterized conserved protein
  Sce:  YDR489w
  Spo:  SPBP4H10.21c
  Ecu:  ECU07g1780
_______

[S] COG5087 Uncharacterized conserved protein
  Sce:  YLL002w
  Spo:  SPBC342.06c
  Ecu:  ECU01g0860
_______

[R] COG5088 Rad5p-binding protein
  Sce:  YGL127c
  Spo:  SPCP31B10.03c
  Ecu:  ECU11g0360
_______

[K] COG5090 Transcription initiation factor IIF, small subunit (RAP30)
  Sce:  YGR005c
  Spo:  SPBC1198.13c
  Ecu:  ECU02g0780
_______

[R] COG5091 Suppressor of G2 allele of skp1 and related proteins
  Sce:  YOR057w
  Spo:  SPBC36.12c
  Ecu:  ECU05g1160
_______

[I] COG5092 N-myristoyl transferase
  Sce:  YLR195c
  Spo:  SPBC2G2.11
  Ecu:  ECU03g1350
_______

[S] COG5093 Uncharacterized conserved protein
  Sce:  YJL072c
  Spo:  SPBC725.13c
  Ecu:  ECU06g1410
_______

[K] COG5094 Transcription initiation factor TFIID, subunit TAF9 (also component of histone acetyltransferase SAGA)
  Sce:  YMR236w
  Spo:  SPAC12G12.05c
  Ecu:  ECU01g1330
_______

[K] COG5095 Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA)
  Sce:  YGL112c
  Spo:  SPCC16C4.18c
  Ecu:  ECU10g1120
_______

[U] COG5096 Vesicle coat complex, various subunits
  Sce:  YDR238c YGR261c YJR005w YKL135c
  Spo:  SPAC23H3.06 SPBC146.14c SPBC2G2.06c SPBC947.02
  Ecu:  ECU06g0770 ECU08g1100
_______

[K] COG5097 RNA polymerase II transcriptional regulation mediator
  Sce:  YHR058c
  Spo:  SPAC1002.15c
  Ecu:  ECU01g0500
_______

[BD] COG5098 Chromosome condensation complex Condensin, subunit D2
  Sce:  YLR272c
  Spo:  SPBC776.13
  Ecu:  ECU02g1240
_______

[J] COG5099 RNA-binding protein of the Puf family, translational repressor
  Sce:  YGL014w YGL178w YJR091c YLL013c YPR042c
  Spo:  SPAC1687.22c SPAC4G8.03c SPAC4G9.05 SPAC6G9.14 SPBC56F2.08c SPBP35G2.14 SPCC1682.08c
  Ecu:  ECU11g1730
_______

[Y] COG5100 Nuclear pore protein
  Sce:  YBR170c
  Spo:  SPBC1711.10c
  Ecu:  ECU07g0770
_______

[YU] COG5101 Importin beta-related nuclear transport receptor
  Sce:  YGR218w
  Spo:  SPAC1805.17
  Ecu:  ECU11g0240
_______

[U] COG5102 Membrane protein involved in ER to Golgi transport
  Sce:  YBL102w
  Spo:  SPAC1527.02
  Ecu:  ECU09g0940
_______

[DK] COG5103 Cell division control protein, negative regulator of transcription
  Sce:  YCR093w
  Spo:  SPAC20G8.06
  Ecu:  ECU11g1370
_______

[A] COG5104 Splicing factor
  Sce:  YKL012w
  Spo:  SPAC4D7.13
  Ecu:  ECU09g0700
_______

[D] COG5105 Mitotic inducer, protein phosphatase
  Sce:  YMR036c
  Spo:  SPAC24H6.05
  Ecu:  ECU04g0710
_______

[S] COG5106 Uncharacterized conserved protein
  Sce:  YKR081c
  Spo:  SPAC926.08c
  Ecu:  ECU04g1240
_______

[A] COG5107 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor
  Sce:  YMR061w
  Spo:  SPAC6F12.17
  Ecu:  ECU02g0930
_______

[K] COG5108 Mitochondrial DNA-directed RNA polymerase
  Sce:  YFL036w
  Spo:  SPAC26H5.12
  Atu:  AGc2186
_______

[R] COG5109 Uncharacterized conserved protein, contains RING Zn-finger
  Sce:  YDR255c
  Spo:  SPBC29A3.03c
  Ecu:  ECU04g1430
_______

[O] COG5110 26S proteasome regulatory complex component
  Sce:  YHR027c
  Spo:  SPBP19A11.03c
  Ecu:  ECU04g0310
_______

[K] COG5111 DNA-directed RNA polymerase III, subunit C34
  Sce:  YNR003c
  Spo:  SPCC290.02
  Ecu:  ECU10g0210
_______

[R] COG5112 U1-like Zn-finger-containing protein
  Sce:  YLR074c
  Spo:  SPAC19B12.11c
  Ecu:  ECU02g0310
_______

[O] COG5113 Ubiquitin fusion degradation protein 2
  Sce:  YDL190c
  Spo:  SPAC20H4.10
  Ecu:  ECU04g1210
_______

[B] COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2
  Sce:  YDR448w
  Spo:  SPCC24B10.08c
  Ecu:  ECU04g0230
_______

[O] COG5116 26S proteasome regulatory complex component
  Sce:  YIL075c
  Spo:  SPBC17D11.07c
  Ecu:  ECU02g0480
_______

[JU] COG5117 Protein involved in the nuclear export of pre-ribosomes
  Sce:  YLR002c
  Spo:  SPBC887.03c
  Ecu:  ECU09g0350
_______

[K] COG5118 Transcription initiation factor TFIIIB, Bdp1 subunit
  Sce:  YNL039w
  Spo:  SPCC1919.14c
  Ecu:  ECU03g1040
_______

[R] COG5119 Uncharacterized protein, contains ParB-like nuclease domain
  Sce:  YKL086w
  Spo:  SPBC106.02c
  Nos:  asl4146
_______

[U] COG5120 Membrane protein involved in Golgi transport
  Sce:  YMR292w
  Spo:  SPCC4B3.02c
  Ecu:  ECU10g0860
_______

[U] COG5122 Transport protein particle (TRAPP) complex subunit
  Sce:  YDR246w
  Spo:  SPBC3B9.12
  Ecu:  ECU06g0270
_______

[K] COG5123 Transcription initiation factor IIA, gamma subunit
  Sce:  YKL058w
  Spo:  SPCC553.11c
  Ecu:  ECU02g0450
_______

[DR] COG5124 Protein predicted to be involved in meiotic recombination
  Sce:  YGL183c
  Spo:  SPAC13A11.03
  Ecu:  ECU10g1600
_______

[S] COG5125 Uncharacterized conserved protein
  Sce:  YDL105w
  Spo:  SPBC20F10.04c
  Ecu:  ECU08g1820
_______

[TZDR] COG5126 Ca2+-binding protein (EF-Hand superfamily)
  Sce:  YBR109c YDR373w YGL106w YKL190w YOR257w YPR188c
  Spo:  SPAC1687.14c SPAC18B11.04 SPAC29A4.05 SPAC3A12.14 SPAC926.03 SPAP8A3.08 SPCC1682.04
        SPCC830.06
  Ecu:  ECU03g1570 ECU04g0810 ECU08g0160 ECU09g1220
  Nos:  asr1131
_______

[C] COG5127 Vacuolar H+-ATPase V1 sector, subunit C
  Sce:  YKL080w
  Spo:  SPAPB2B4.05
  Ecu:  ECU03g0500
_______

[U] COG5128 Transport protein particle (TRAPP) complex subunit
  Sce:  YDR472w
  Spo:  SPBC1718.05
  Ecu:  ECU11g1320
_______

[R] COG5129 Nuclear protein with HMG-like acidic region
  Sce:  YAL025c
  Spo:  SPAC222.06
  Ecu:  ECU10g0830
_______

[UT] COG5130 Prenylated rab acceptor 1 and related proteins
  Sce:  YNL044w
  Spo:  SPCC306.02c
  Ecu:  ECU02g1470
_______

[O] COG5131 Ubiquitin-like protein
  Sso:  SSO5559
  Sce:  YIL008w
  Spo:  SPCC548.04
  Ecu:  ECU03g0800
_______

[KD] COG5132 Cell cycle control protein, G10 family
  Sce:  YCR063w
  Spo:  SPBC24C6.11
  Ecu:  ECU05g1230
_______

[S] COG5133 Uncharacterized conserved protein
  Sce:  YHR122w
  Spo:  SPAC144.16
  Ecu:  ECU10g1290
_______

[S] COG5134 Uncharacterized conserved protein
  Sce:  YKL095w
  Spo:  SPBC18H10.10c
  Ecu:  ECU08g0570
_______

[S] COG5135 Uncharacterized conserved protein
  Sce:  YGR017w
  Spo:  SPBC725.03
  Nos:  alr4036
_______

[A] COG5136 U1 snRNP-specific protein C
  Sce:  YLR298c
  Spo:  SPBP35G2.09
  Ecu:  ECU10g0290
_______

[KB] COG5137 Histone chaperone involved in gene silencing
  Sce:  YJL115w
  Spo:  SPCC663.05c
  Ecu:  ECU07g0130
_______

[S] COG5138 Uncharacterized conserved protein
  Sce:  YOL146w
  Spo:  SPAC227.16c
  Ecu:  ECU11g0920
_______

[S] COG5139 Uncharacterized conserved protein
  Sce:  YPR133c
  Spo:  SPBC19G7.16
  Ecu:  ECU08g0440
_______

[O] COG5140 Ubiquitin fusion-degradation protein
  Sce:  YGR048w
  Spo:  SPBC16A3.09c
  Ecu:  ECU10g1180
_______

[R] COG5141 PHD zinc finger-containing protein
  Sce:  YPR031w
  Spo:  SPBC17D11.04c
  Ecu:  ECU09g1850
_______

[L] COG5142 Oxidation resistance protein
  Sce:  YPL196w
  Spo:  SPAC8C9.16c
  Ecu:  ECU07g0940
_______

[U] COG5143 Synaptobrevin/VAMP-like protein
  Sce:  YAL030w YKL196c YLR093c YLR268w YOR327c
  Spo:  SPAC6G9.11 SPBC13G1.11 SPBC2A9.08c
  Ecu:  ECU03g0530 ECU11g0980
_______

[KL] COG5144 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2
  Sce:  YPL122c
  Spo:  SPBC13G1.13
  Ecu:  ECU01g0670
_______

[L] COG5145 DNA excision repair protein
  Sce:  YMR201c
  Spo:  SPBC649.03
  Ecu:  ECU10g1170
_______

[H] COG5146 Pantothenate kinase, acetyl-CoA regulated
  Sce:  YDR531w
  Spo:  SPBC4B4.01c
  Sau:  SA1932
_______

[KAD] COG5147 Myb superfamily proteins, including transcription factors and mRNA splicing factors
  Sce:  YBR049c YDR026c YKR099w YMR213w
  Spo:  SPAC22F8.07c SPAC644.12 SPBC1198.11c
  Ecu:  ECU02g0420 ECU06g1020 ECU11g1690
_______

[O] COG5148 26S proteasome regulatory complex, subunit RPN10/PSMD4
  Sce:  YHR200w
  Spo:  SPAC637.10c
  Ecu:  ECU10g0410
_______

[K] COG5149 Transcription initiation factor IIA, large chain
  Sce:  YOR194c
  Spo:  SPBC28F2.09
  Ecu:  ECU03g1070
_______

[K] COG5150 Class 2 transcription repressor NC2, beta subunit (Dr1)
  Sce:  YDR397c
  Spo:  SPBC30D10.02
  Ecu:  ECU11g0730
_______

[KL] COG5151 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1
  Sce:  YLR005w
  Spo:  SPCC1682.07
  Ecu:  ECU04g0280
_______

[R] COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers
  Sce:  YLR323c
  Spo:  SPBC13E7.02_1
  Ecu:  ECU06g1060
_______

[UI] COG5153 Putative lipase essential for disintegration of autophagic bodies inside the vacuole
  Sce:  YCR068w
  Spo:  SPAC23C4.16c
  Ecu:  ECU04g0660
_______

[J] COG5154 RNA-binding protein required for 60S ribosomal subunit biogenesis
  Sce:  YOL077c
  Spo:  SPBC800.06
  Ecu:  ECU01g0360
_______

[DO] COG5155 Separase, a protease involved in sister chromatid separation
  Sce:  YGR098c
  Spo:  SPCC5E4.04
  Ecu:  ECU07g0350
_______

[DO] COG5156 Anaphase-promoting complex (APC), subunit 10
  Sce:  YGL240w
  Spo:  SPBC1A4.01
  Ecu:  ECU05g0980
_______

[K] COG5157 RNA polymerase II assessory factor
  Sce:  YLR418c
  Spo:  SPBC17G9.02c
  Ecu:  ECU09g1730
_______

[U] COG5158 Proteins involved in synaptic transmission and general secretion, Sec1 family
  Sce:  YDR164c YDR189w YGL095c YLR396c
  Spo:  SPAC2G11.03c SPBC1703.15c SPCC584.05 SPCC74.01
  Ecu:  ECU02g0430 ECU03g0900 ECU06g1460
_______

[O] COG5159 26S proteasome regulatory complex component
  Sce:  YDL097c
  Spo:  SPAC23G3.11
  Ecu:  ECU07g0590
_______

[O] COG5160 Protease, Ulp1 family
  Sce:  YIL031w YPL020c
  Spo:  SPAC17A5.07c SPBC19G7.09
  Ecu:  ECU05g0760
_______

[A] COG5161 Pre-mRNA cleavage and polyadenylation specificity factor
  Sce:  YDR301w
  Spo:  SPBC1709.08
  Ecu:  ECU11g0610
_______

[K] COG5162 Transcription initiation factor TFIID, subunit TAF10 (also component of histone acetyltransferase SAGA)
  Sce:  YDR167w
  Spo:  SPBC21H7.02
  Ecu:  ECU11g0830
_______

[J] COG5163 Protein required for biogenesis of the 60S ribosomal subunit
  Sce:  YGR103w
  Spo:  SPBC19F5.05c
  Ecu:  ECU11g0460
_______

[K] COG5164 Transcription elongation factor
  Sce:  YML010w
  Spo:  SPAC23C4.19_3
  Ecu:  ECU11g1930_2
_______

[KLB] COG5165 Nucleosome-binding factor SPN, POB3 subunit
  Sce:  YML069w
  Spo:  SPBC609.05
  Ecu:  ECU07g1010
_______

[S] COG5166 Uncharacterized conserved protein
  Sce:  YLL032c
  Spo:  SPBC28E12.02
  Ecu:  ECU06g1470
_______

[U] COG5167 Protein involved in vacuole import and degradation
  Sce:  YNL212w
  Spo:  SPBC1685.14c
  Ecu:  ECU09g1700
_______

[K] COG5169 Heat shock transcription factor
  Sce:  YGL073w YGR249w_1 YHR206w_1 YJR147w YOR140w
  Spo:  SPAC2E12.02.02 SPAC8C9.14_1
  Ecu:  ECU04g0400 ECU04g0530 ECU08g0970_1
_______

[T] COG5170 Serine/threonine protein phosphatase 2A, regulatory subunit
  Sce:  YGL190c
  Spo:  SPAC227.07c
  Ecu:  ECU05g0810
_______

[U] COG5171 Ran GTPase-activating protein (Ran-binding protein)
  Sce:  YDR002w
  Spo:  SPBC1773.07c
  Ecu:  ECU02g0140
_______

[U] COG5173 Exocyst complex subunit SEC6
  Sce:  YIL068c
  Spo:  SPCC1235.10c
  Ecu:  ECU11g0390
_______

[K] COG5174 Transcription initiation factor IIE, beta subunit
  Sce:  YKR062w
  Spo:  SPCC1672.08c
  Ecu:  ECU06g0350
_______

[K] COG5175 Transcriptional repressor
  Sce:  YER068w
  Spo:  SPAC16C9.04c
  Ecu:  ECU11g1660
_______

[A] COG5176 Splicing factor (branch point binding protein)
  Sce:  YLR116w_1
  Spo:  SPCC962.06c_1
  Ecu:  ECU02g1160
_______

[S] COG5177 Uncharacterized conserved protein
  Sce:  YDL060w
  Spo:  SPAC23H4.15
  Ecu:  ECU02g1440
_______

[A] COG5178 U5 snRNP spliceosome subunit
  Sce:  YHR165c
  Spo:  SPAC4F8.12c
  Ecu:  ECU04g0760
_______

[K] COG5179 Transcription initiation factor TFIID, subunit TAF1
  Sce:  YGR274c
  Spo:  SPAC2G11.14
  Ecu:  ECU10g0760_1
_______

[A] COG5180 Protein interacting with poly(A)-binding protein
  Sce:  YGR178c
  Spo:  SPBC21B10.03c
  Ecu:  ECU11g1020
_______

[A] COG5181 U2 snRNP spliceosome subunit
  Sce:  YMR288w
  Spo:  SPAC27F1.09c
  Ecu:  ECU11g0900
_______

[A] COG5182 Splicing factor 3b, subunit 2
  Sce:  YMR240c
  Spo:  SPAC22F8.10c
  Ecu:  ECU11g1490
_______

[A] COG5183 Protein involved in mRNA turnover and stability
  Sce:  YIL030c
  Spo:  SPBC14F5.07
  Ecu:  ECU06g0830
_______

[DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins
  Sce:  YAL020c YGL097w YLR077w
  Spo:  SPAC10F6.04 SPBC557.03c SPCC330.11_2
  Ecu:  ECU04g1500
  Cac:  CAC2722
_______

[D] COG5185 Protein involved in chromosome segregation, interacts with SMC proteins
  Sce:  YIL144w
  Spo:  SPBC11C11.03
  Ecu:  ECU10g0810
_______

[A] COG5186 Poly(A) polymerase
  Sce:  YKR002w
  Spo:  SPBC646.04
  Ecu:  ECU02g0730
_______

[O] COG5187 26S proteasome regulatory complex component, contains PCI domain
  Sce:  YPR108w
  Spo:  SPBC582.07c
  Ecu:  ECU10g0190
_______

[A] COG5188 Splicing factor 3a, subunit 3
  Sce:  YDL030w
  Spo:  SPBC36.09
  Ecu:  ECU07g1140
_______

[KD] COG5189 Putative transcriptional repressor regulating G2/M transition
  Sce:  YLR403w
  Spo:  SPAC16.05c
  Ecu:  ECU03g0940
_______

[K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor
  Sce:  YHR004c YLL010c YLR019w YMR277w YPL063w
  Spo:  SPAC19B12.05c SPAC2F7.02c SPBC17A3.01c SPBC3B8.10c
  Ecu:  ECU07g0890 ECU10g0580 ECU10g1270
_______

[R] COG5191 Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat
  Sce:  YDR449c
  Spo:  SPBC244.02c
  Ecu:  ECU07g0080
_______

[J] COG5192 GTP-binding protein required for 40S ribosome biogenesis
  Sce:  YPL217c
  Spo:  SPBC31E1.06
  Ecu:  ECU06g0420
_______

[OJ] COG5193 La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation
  Sce:  YCL037c YDL051w YDR515w
  Spo:  SPAC1527.03 SPAC57A10.10c
  Ecu:  ECU09g0680
_______

[OD] COG5194 Component of SCF ubiquitin ligase and anaphase-promoting complex
  Sce:  YDL008w YOL133w
  Spo:  SPAC23H4.18c SPAC343.03
  Ecu:  ECU01g1095
_______

[S] COG5195 Uncharacterized conserved protein
  Sce:  YEL044w
  Spo:  SPAC222.04c
  Ecu:  ECU04g1390
_______

[U] COG5196 ER lumen protein retaining receptor
  Sce:  YBL040c
  Spo:  SPBP8B7.22
  Ecu:  ECU06g1570
_______

[S] COG5197 Predicted membrane protein
  Sce:  YNL263c
  Spo:  SPBC25H2.06c
  Ecu:  ECU09g1590
_______

[R] COG5198 Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg)
  Sce:  YJL097w
  Spo:  SPBC19C2.15c
  Ecu:  ECU05g1430
_______

[Z] COG5199 Calponin
  Sce:  YOR367w
  Spo:  SPAC4F8.10c
  Ecu:  ECU03g1150
_______

[A] COG5200 U1 snRNP component, mediates U1 snRNP association with cap-binding complex
  Sce:  YDL087c
  Spo:  SPCC16A11.13
  Ecu:  ECU10g0840
_______

[O] COG5201 SCF ubiquitin ligase, SKP1 component
  Sce:  YDR328c
  Spo:  SPBC409.05
  Ecu:  ECU03g0300
_______

[S] COG5202 Predicted membrane protein
  Sce:  YOR175c
  Spo:  SPBC16A3.10
  Ecu:  ECU05g1460
_______

[K] COG5204 Transcription elongation factor SPT4
  Sce:  YGR063c
  Spo:  SPBC21C3.16c
  Ecu:  ECU08g1660
_______

[O] COG5206 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8
  Sce:  YDR331w
  Spo:  SPCC11E10.02c
  Ecu:  ECU09g1070
_______

[O] COG5207 Isopeptidase T
  Sce:  YBR058c
  Spo:  SPBC6B1.06c
  Ecu:  ECU03g0660
_______

[K] COG5208 CCAAT-binding factor, subunit C
  Sce:  YOR358w
  Spo:  SPBC3B8.02
  Ecu:  ECU05g0450
_______

[R] COG5209 Uncharacterized protein involved in cell differentiation/sexual development
  Sce:  YNL288w
  Spo:  SPAC29B12.06c
  Ecu:  ECU01g0380
_______

[R] COG5210 GTPase-activating protein
  Sce:  YDL234c YFL027c YGR100w YMR055c YMR192w YNL293w YOL112w
        YOR070c YPL249c
  Spo:  SPAC1952.17c SPAC23D3.03c SPAC26F1.09 SPAC4G8.04 SPAC630.05 SPAC6F6.08c SPBC1778.09
        SPBC215.01 SPBC530.01 SPBC651.03c SPCC1259.11c SPCC1620.12c SPCC4G3.09c
  Ecu:  ECU03g0560 ECU04g1530 ECU11g1700
_______

[K] COG5211 RNA polymerase II-interacting protein involved in transcription start site selection
  Sce:  YNL222w
  Spo:  SPAC3G9.04
  Ecu:  ECU06g0840
_______

[T] COG5212 Low-affinity cAMP phosphodiesterase
  Sce:  YGL248w
  Spo:  SPCC285.09c
  Ype:  YPO2696
_______

[A] COG5213 Polyadenylation factor I complex, subunit FIP1
  Sce:  YJR093c
  Spo:  SPAC22G7.10
  Ecu:  ECU11g1390
_______

[L] COG5214 DNA polymerase alpha-primase complex, polymerase-associated subunit B
  Sce:  YBL035c
  Spo:  SPCC553.09c
  Ecu:  ECU10g1080
_______

[U] COG5215 Karyopherin (importin) beta
  Sce:  YLR347c
  Spo:  SPAC1B1.03c
  Ecu:  ECU10g1240
_______

[S] COG5216 Uncharacterized conserved protein
  Sce:  YBL071w-a
  Spo:  SPAC8F11.02c
  Ecu:  ECU09g1005
_______

[DZ] COG5217 Microtubule-binding protein involved in cell cycle control
  Sce:  YER016w
  Spo:  SPAC18G6.15
  Ecu:  ECU01g1030
_______

[BD] COG5218 Chromosome condensation complex Condensin, subunit G
  Sce:  YDR325w
  Spo:  SPCC188.03
  Ecu:  ECU08g0610
_______

[R] COG5219 Uncharacterized conserved protein, contains RING Zn-finger
  Sce:  YMR247c
  Spo:  SPBC21D10.09c
  Ecu:  ECU05g1100
_______

[DKL] COG5220 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3
  Sce:  YDR460w
  Spo:  SPBC776.18c
  Ecu:  ECU11g0220
_______

[K] COG5221 Dopey and related predicted leucine zipper transcription factors
  Sce:  YDR141c
  Spo:  SPAPB21F2.02
  Ecu:  ECU07g1440
_______

[R] COG5222 Uncharacterized conserved protein, contains RING Zn-finger
  Sce:  YKL059c
  Spo:  SPBP8B7.15c
  Ecu:  ECU09g0340
_______

[S] COG5223 Uncharacterized conserved protein
  Sce:  YKL099c
  Spo:  SPAC18G6.06
  Ecu:  ECU09g1290
_______

[K] COG5224 CCAAT-binding factor, subunit B
  Sce:  YGL237c
  Spo:  SPBC725.11c
  Ecu:  ECU03g1510
_______

[J] COG5225 Uncharacterized protein involved in ribosome biogenesis
  Sce:  YOR294w
  Spo:  SPBC29A3.16
  Ecu:  ECU08g1510
_______

[A] COG5226 mRNA capping enzyme, guanylyltransferase (alpha) subunit
  Sce:  YGL130w
  Spo:  SPBC2F12.08c
  Ecu:  ECU09g0400
_______

[O] COG5227 Ubiquitin-like protein (sentrin)
  Sce:  YDR510w
  Spo:  SPBC365.06
  Ecu:  ECU07g0660
_______

[A] COG5228 mRNA deadenylase subunit
  Sce:  YNR052c
  Spo:  SPCC18.06c
  Ecu:  ECU08g0850
_______

[BD] COG5229 Chromosome condensation complex Condensin, subunit H
  Sce:  YBL097w
  Spo:  SPCC306.03c
  Ecu:  ECU02g1290
_______

[S] COG5230 Uncharacterized conserved protein
  Sce:  YDR013w
  Spo:  SPBP23A10.09
  Ecu:  ECU10g0950
_______

[C] COG5231 Vacuolar H+-ATPase V1 sector, subunit H
  Sce:  YPR036w
  Spo:  SPAC7D4.10
  Ecu:  ECU08g0250
_______

[U] COG5232 Preprotein translocase subunit Sec62
  Sce:  YPL094c
  Spo:  SPAC17G6.09
  Ecu:  ECU07g0700
_______

[U] COG5233 Peripheral Golgi membrane protein
  Sce:  YDR517w
  Spo:  SPAC1D4.02c
  Ecu:  ECU01g0530
_______

[OZ] COG5234 Beta-tubulin folding cofactor D
  Sce:  YOR349w
  Spo:  SPBC11C11.04c
  Ecu:  ECU06g0220
_______

[L] COG5235 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit
  Sce:  YNL312w
  Spo:  SPCC1753.01c
  Ecu:  ECU06g0360
_______

[R] COG5236 Uncharacterized conserved protein, contains RING Zn-finger
  Sce:  YDR266c
  Spo:  SPCC1223.01
  Ecu:  ECU01g0780
_______

[S] COG5237 Predicted membrane protein
  Sce:  YCR044c
  Spo:  SPAC823.07
  Ecu:  ECU09g1170
_______

[TA] COG5238 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport
  Sce:  YMR235c
  Spo:  SPAC22E12.07
  Ecu:  ECU05g0620
_______

[A] COG5239 mRNA deadenylase, exonuclease subunit and related nucleases
  Sce:  YAL021c_2 YML118w YMR285c YOL042w
  Spo:  SPBC9B6.11c SPCC31H12.08c_2
  Ecu:  ECU11g0770_2
_______

[U] COG5240 Vesicle coat complex COPI, gamma subunit
  Sce:  YNL287w
  Spo:  SPAC57A7.10c
  Ecu:  ECU03g0270
_______

[L] COG5241 Nucleotide excision repair endonuclease NEF1, RAD10 subunit
  Sce:  YML095c
  Spo:  SPBC4F6.15c
  Ecu:  ECU10g1330
_______

[KL] COG5242 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4
  Sce:  YPR056w
  Spo:  SPBC30B4.07c
  Ecu:  ECU07g0880
_______

[O] COG5243 HRD ubiquitin ligase complex, ER membrane component
  Sce:  YOL013c
  Spo:  SPBC17D11.02c
  Ecu:  ECU01g0750
_______

[D] COG5244 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B
  Sce:  YPL174c
  Spo:  SPAC27D7.13c
  Ecu:  ECU06g0410
_______

[Z] COG5245 Dynein, heavy chain
  Sce:  YKR054c
  Spo:  SPAC1093.06c
  Ecu:  ECU10g0640
_______

[A] COG5246 Splicing factor 3a, subunit 2
  Sce:  YDL043c
  Spo:  SPBC21C3.05
  Ecu:  ECU03g0480
_______

[K] COG5247 Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog)
  Sce:  YER159c
  Spo:  SPAC17G8.03c
  Ecu:  ECU11g1470
_______

[K] COG5248 Transcription initiation factor TFIID, subunit TAF13
  Sce:  YML098w
  Spo:  SPCC1494.02c
  Ecu:  ECU04g0950
_______

[U] COG5249 Golgi protein involved in Golgi-to-ER retrieval
  Sce:  YCL001w
  Spo:  SPAC22E12.05c
  Ecu:  ECU08g0700
_______

[K] COG5250 RNA polymerase II, fourth largest subunit
  Sce:  YJL140w
  Spo:  SPBC337.14
  Ecu:  ECU08g0765
_______

[K] COG5251 Transcription initiation factor TFIID, subunit TAF11
  Sce:  YML015c
  Spo:  SPAC1002.04c
  Ecu:  ECU02g1250
_______

[R] COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein
  Sce:  YOR091w
  Spo:  SPBC28F2.02
  Ecu:  ECU09g1010
_______

[T] COG5253 Phosphatidylinositol-4-phosphate 5-kinase
  Sce:  YDR208w YFR019w_3
  Spo:  SPAC19G12.14 SPBC6B1.11c
  Ecu:  ECU03g0330
_______

[S] COG5254 Predicted membrane protein
  Sce:  YLR242c
  Spo:  SPAPB1A10.15
  Ecu:  ECU09g0660
_______

[S] COG5255 Uncharacterized protein conserved in bacteria
  Spn:  SP1827
  Atu:  AGc171
  Mlo:  mlr3352
  Ccr:  CC1790
_______

[J] COG5256 Translation elongation factor EF-1alpha (GTPase)
  Afu:  AF0937
  Hbs:  VNG2649G
  Mac:  MA1256
  Mth:  MTH1058
  Mja:  MJ0324
  Mka:  MK0247
  Tac:  Ta0444
  Tvo:  TVN1051
  Pho:  PH1484
  Pab:  PAB0465
  Pya:  PAE3000
  Sso:  SSO0216
  Ape:  APE1844
  Sce:  YBR118w YDR172w_2 YKR084c YOR076c YPR080w
  Spo:  SPAC23A1.10 SPAP8A3.05 SPBC2G5.08 SPBC839.15c SPCC584.04 SPCC794.09c
  Ecu:  ECU04g1100 ECU06g1440
_______

[J] COG5257 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)
  Afu:  AF0592
  Hbs:  VNG2056G
  Mac:  MA3690
  Mth:  MTH261
  Mja:  MJ1261
  Mka:  MK1447
  Tac:  Ta0322
  Tvo:  TVN1274
  Pho:  PH1706
  Pab:  PAB2040
  Pya:  PAE0064
  Sso:  SSO0412
  Ape:  APE2366
  Sce:  YER025w_2
  Spo:  SPBC17G9.09
  Ecu:  ECU01g0700
_______

[R] COG5258 GTPase
  Afu:  AF0744
  Hbs:  VNG1676G
  Mth:  MTH1185
  Pya:  PAE1764
  Sso:  SSO2429
_______

[BK] COG5259 RSC chromatin remodeling complex subunit RSC8
  Sce:  YFR037c YJL176c
  Spo:  SPAC17G6.10 SPAC23H3.10
  Ecu:  ECU05g0350
_______

[L] COG5260 DNA polymerase sigma
  Sce:  YNL299w YOL115w
  Spo:  SPAC12G12.13c SPAC17H9.01 SPAC19D5.03 SPAC821.04c SPBC1685.06 SPCC663.12
  Ecu:  ECU06g1520
_______

[DT] COG5261 Protein involved in regulation of cellular morphogenesis/cytokinesis
  Sce:  YPL242c
  Spo:  SPAC4F8.13c SPBC646.12c
  Ecu:  ECU10g1740
_______

[B] COG5262 Histone H2A
  Sce:  YBL003c YDR225w YOL012c
  Spo:  SPAC19G12.06c SPBC11B10.10c SPCC622.08c
  Ecu:  ECU02g0720
_______

[R] COG5263 FOG: Glucan-binding domain (YG repeat)
  Cac:  CAC1079_2
  Lla:  L123471_1 L87107_1 L88643
  Spn:  SP0069 SP0117 SP0377 SP0378 SP0390_2 SP0391 SP0667
        SP0930_2 SP0965_1 SP1937 SP2136 SP2190 SP2201_2
_______

[O] COG5264 Vacuolar transporter chaperone
  Sce:  YER072w YFL004w_2 YJL012c-a YPL019c_2
  Spo:  SPAC14C4.11_2 SPBC21B10.04c SPCC1322.14c_2
  Ecu:  ECU06g1420i_2
_______

[O] COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components
  Sce:  YMR301c
  Spo:  SPAC15A10.01 SPCC737.09c SPCC74.01c
  Ype:  YPO2588
  Rso:  RSc0478
  Atu:  AGc1966
  Sme:  SMc00550
  Bme:  BMEI1492
  Mlo:  mlr7818
  Ccr:  CC1314
  Rpr:  RP205
  Rco:  RC0268 RC0269 RC0270 RC0271
_______

[P] COG5266 ABC-type Co2+ transport system, periplasmic component
  Mac:  MA1849
  Fnu:  FN0947 FN1807
  Hin:  HI1427 HI1624
  Nme:  NMB1475
  NmA:  NMA1686
  Bme:  BMEI0641
_______

[S] COG5267 Uncharacterized protein conserved in bacteria
  Rso:  RSc1650
  Atu:  AGl3457
  Mlo:  mll5453
  Ccr:  CC1978 CC2415
_______

[NU] COG5268 Type IV secretory pathway, TrbD component
  Xfa:  XF2054
  Rso:  RSc2582
  Atu:  AGpT85
  Mlo:  mll9611
_______

[JO] COG5269 Ribosome-associated chaperone zuotin
  Sce:  YGR285c
  Spo:  SPBC1778.01c
  Ecu:  ECU01g0370
_______

[J] COG5270 PUA domain (predicted RNA-binding domain)
  Mac:  MA2894_1
  Mja:  MJ0066_1
  Mka:  MK0621_1
  Pho:  PH0268_1
  Pab:  PAB0168_1
  Pya:  PAE1989_1
_______

[R] COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain
  Sce:  YLR106c
  Spo:  SPCC737.08
  Ecu:  ECU08g1900
_______

[O] COG5272 Ubiquitin
  Sce:  YDR139c YEL037c YIL148w_1 YKR094c_1 YLL039c YLR167w_1 YMR276w
        YNR032c-a
  Spo:  SPAC11G7.04_1 SPAC1805.12c_1 SPAC26A3.16 SPAC589.10c_1 SPAC6G10.11c_1 SPBC12D12.08c SPBC2D10.12
        SPBC31E1.03 SPBC337.08c
  Ecu:  ECU02g0740i ECU02g1080 ECU07g0290_1 ECU07g1380_1 ECU10g1730
_______

[R] COG5273 Uncharacterized protein containing DHHC-type Zn finger
  Sce:  YDR126w YDR264c_2 YDR459c YLR246w YNL326c YOL003c YOR034c_2
  Spo:  SPAC2F7.10_2 SPBC13G1.07 SPBC17A3.11 SPBC2F12.15c SPBC3H7.09
  Ecu:  ECU04g0260 ECU08g1430 ECU08g1500 ECU09g0230 ECU10g0720_2
_______

[CI] COG5274 Cytochrome b involved in lipid metabolism
  Sce:  YGL055w_2 YML054c_1 YMR073c YMR272c_1 YNL111c
  Spo:  SPAC19G12.08_1 SPAC1F12.10 SPBC29A10.16c SPCC1281.06c_2 SPCC16A11.10c SPCC330.03c
  Ecu:  ECU01g1115
_______

[R] COG5275 BRCT domain type II
  Sce:  YOR217w_1
  Spo:  SPBC23E6.07c_1
  Ecu:  ECU05g1530_1
_______

[S] COG5276 Uncharacterized conserved protein
  Mac:  MA1510_1 MA4034_1
  Tma:  TM0946
  Ype:  YPO1516
_______

[Z] COG5277 Actin and related proteins
  Sce:  YDL029w YFL039c YHR129c YJL081c YJR065c YLR085c YMR033w
        YNL059c YOR141c YPR034w
  Spo:  SPAC1071.06 SPAC11H11.06 SPAC23D3.09 SPAC630.03 SPAC664.02c SPBC1347.12 SPBC32H8.12c
        SPBC365.10 SPBP23A10.08 SPCC550.12
  Ecu:  ECU01g0460 ECU04g1090 ECU05g0400
_______

[T] COG5278 Predicted periplasmic ligand-binding sensor domain
  Dra:  DRA0205_1
  Bha:  BH0876_1 BH3863_1 BH3900_1
  Nos:  all4897_1 alr1883_1 alr3761_2
  Rso:  RSc0289_1
  Atu:  AGc1336_1 AGc3614_1
  Mlo:  mlr5737_1
  Ccr:  CC3145_1
_______

[D] COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
  Sce:  YDL117w
  Spo:  SPAC9G1.06c
  Cac:  CAP0002_2 CAP0003_2
  Spy:  SPy0210
  Syn:  sll1681
_______

[S] COG5280 Phage-related minor tail protein
  Mac:  MA3805
  Dra:  DRA0108_1
  Lla:  L60836_1
  Sau:  SA1766_1
  Lin:  lin2568_1
  Bsu:  BS_yqbO_1
_______

[S] COG5281 Phage-related minor tail protein
  EcZ:  Z0975 Z1373 Z1374 Z1814 Z1913 Z2140 Z2354
        Z2355 Z3084 Z3316 Z3318 Z6034
  Ecs:  ECs0837 ECs1114 ECs1552 ECs1553 ECs1643 ECs1803 ECs1983
        ECs2166 ECs2240 ECs2725 ECs2726 ECs2949
  Ype:  YPO2119
  Sty:  STM0918 STM1041 STM2594
  Pae:  PA0636
  Rso:  RSc0873 RSc1690
  Atu:  AGc1765
  Bme:  BMEI1345
_______

[S] COG5282 Uncharacterized conserved protein
  Hbs:  VNG1497C
  Cgl:  Cgl0758
  Mtu:  Rv3195 Rv3626c
  MtC:  MT3287 MT3728
  Mle:  ML0642
_______

[S] COG5283 Phage-related tail protein
  Cac:  CAC1883_1
  Lla:  L25762_1 L72137_1
  Lin:  lin2383
  EcZ:  Z2987
  Ecs:  ECs2641
  Sty:  STM2697
  Xfa:  XF0730 XF2482
_______

[Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
  Sce:  YJR154w
  Mtu:  Rv1501 Rv3633
  MtC:  MT1550 MT3735
  Nos:  all4427
  Rso:  RSp0209
  Sme:  SMc00164
  Mlo:  mlr7444
_______

[K] COG5290 IkappaB kinase complex, IKAP component
  Sce:  YLR384c
  Spo:  SPBC36.07
  Ecu:  ECU09g1860
_______

[S] COG5291 Predicted membrane protein
  Sce:  YDR411c
  Spo:  SPBC365.08c
  Ecu:  ECU11g1920
_______

[S] COG5293 Uncharacterized protein conserved in bacteria
  Bsu:  BS_yydD
  Nos:  alr1855
  Xfa:  XF0161
_______

[S] COG5294 Uncharacterized protein conserved in bacteria
  Lla:  L106083 L177221 L193090
  Sau:  SA0358 SA0887 SAP021
  Lin:  lin2533
  Bsu:  BS_yxeA
_______

[UW] COG5295 Autotransporter adhesin
  Mac:  MA3084
  Fnu:  FN0471 FN0735 FN1499
  Bha:  BH0174
  EcZ:  Z0639 Z5029
  Ecs:  ECs0548 ECs4480
  Ype:  YPO0902
  Sty:  STM3691
  Hin:  HI1731a HI1732
  Pmu:  PM0714 PM1570
  Xfa:  XF1516 XF1529 XF1981
  Nme:  NMB0992
  NmA:  NMA1200
  Rso:  RSp1620
  Sme:  SMc01708
  Bme:  BMEI1872 BMEI1873
  Mlo:  mll2848
_______

[K] COG5296 Transcription factor involved in TATA site selection and in elongation by RNA polymerase II
  Sce:  YGL244w
  Spo:  SPBC651.09c
  Ecu:  ECU02g0360
_______

[G] COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A)
  Mtu:  Rv0062
  MtC:  MT0067
  Xfa:  XF1267
  Rso:  RSp0583
_______

[S] COG5298 Uncharacterized protein conserved in bacteria
  Lin:  lin0532
  Bsu:  BS_ydaL
  Rso:  RSp0512
_______

[R] COG5301 Phage-related tail fibre protein
  Sty:  STM2706 STM4200
  Pae:  PA0620
  Rso:  RSc1921
_______

[R] COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid
  Mtu:  Rv0550c
  MtC:  MT0575
  EcZ:  Z0056
  Ecs:  ECs0052
  Sty:  PSLT027
  Sme:  SMc00348
  Mlo:  msr3871
_______

[S] COG5304 Uncharacterized protein conserved in bacteria
  Syn:  sll1652
  Ccr:  CC0488
  Rco:  RC0477 RC0825
_______

[S] COG5305 Predicted membrane protein
  Pho:  PH0786
  Pab:  PAB1532
  Mtu:  Rv1635c
  MtC:  MT1671
  Mle:  ML1389
  Syn:  sll0727
  Nos:  all1316 all4125 all4127 all9023 alr0055 alr0230
  Sty:  STM1637
_______

[S] COG5306 Uncharacterized conserved protein
  Mac:  MA0441
  Mja:  MJ1470 MJ1472
  Pho:  PH1343
  Pab:  PAB1827
  Pae:  PA0693_1
_______

[R] COG5307 SEC7 domain proteins
  Sce:  YBL060w YDR170c YEL022w YJR031c YPR095c
  Spo:  SPAC11E3.11c SPAC26F1.01 SPAC30.01c SPAC4D7.01c SPBC211.03c
  Ecu:  ECU10g1140
  Rpr:  RP374
_______

[U] COG5308 Nuclear pore complex subunit
  Sce:  YBL079w YER105c
  Spo:  SPAC890.06
  Ecu:  ECU06g0470
_______

[G] COG5309 Exo-beta-1,3-glucanase
  Sce:  YGL028c YGR279c YGR282c YMR305c
  Spo:  SPAC26H5.08c
  Pae:  PA1163_1
_______

[Q] COG5310 Homospermidine synthase
  Mac:  MA1636
  Atu:  AGl2136
  Sme:  SMc04016
  Bme:  BMEII0015 BMEII0016
  Mlo:  mlr3014
_______

[U] COG5314 Conjugal transfer/entry exclusion protein
  Xfa:  XF2079 XFa0039
  Rso:  RSc2580
  Atu:  AGpT81
  Mlo:  mll9607 mlr6401
_______

[S] COG5316 Uncharacterized conserved protein
  Mac:  MA1196
  Dra:  DR0969 DR1923 DR1924
  Ccr:  CC1037 CC1038
_______

[S] COG5317 Uncharacterized protein conserved in bacteria
  Atu:  AGl2183
  Sme:  SMc03989
  Bme:  BMEI0331
  Mlo:  mll3903
  Ccr:  CC3295
_______

[S] COG5319 Uncharacterized protein conserved in bacteria
  Rso:  RSc2046
  Atu:  AGl2637
  Sme:  SMc02441
  Bme:  BMEI0186
  Mlo:  mll3449
  Ccr:  CC0827
_______

[S] COG5321 Uncharacterized protein conserved in bacteria
  Atu:  AGc81
  Sme:  SMc02583
  Bme:  BMEI1810
  Mlo:  mll5310
  Ccr:  CC3467
_______

[R] COG5322 Predicted dehydrogenase
  Dra:  DR0790_2
  Syn:  sll0209
  Nos:  alr5284
  Rso:  RSp0200_1
_______

[S] COG5323 Uncharacterized conserved protein
  Mac:  MA1808
  Atu:  AGc1735
  Bme:  BMEI1350
  Ccr:  CC2790
_______

[S] COG5324 Uncharacterized conserved protein
  Sce:  YJL087c
  Spo:  SPAC17G8.01c
  Fnu:  FN1603_3
_______

[U] COG5325 t-SNARE complex subunit, syntaxin
  Sce:  YOL018c YOR036w YOR106w
  Spo:  SPAC823.05c SPBC31E1.04
  Ecu:  ECU05g1220
_______

[S] COG5328 Uncharacterized protein conserved in bacteria
  Atu:  AGc947
  Sme:  SMc02308
  Bme:  BMEI1669
  Mlo:  mll6455
  Ccr:  CC2345
_______

[T] COG5329 Phosphoinositide polyphosphatase (Sac family)
  Sce:  YIL002c_1 YKL212w YNL106c_1 YNL325c YOR109w_1
  Spo:  SPAC3C7.01c SPBC19F5.03 SPBC2G2.02_1 SPBC577.13_1
  Ecu:  ECU03g1160 ECU08g1420
_______

[S] COG5330 Uncharacterized protein conserved in bacteria
  Atu:  AGc1683 AGc3197
  Sme:  SMc00120 SMc01015
  Bme:  BMEI1354
  Mlo:  mll7653
  Ccr:  CC0948 CC2323 CC2637
_______

[S] COG5331 Uncharacterized protein conserved in bacteria
  Nos:  alr7017
  Atu:  AGc1110
  Sme:  SMc00816
  Mlo:  mlr8352
_______

[DKL] COG5333 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit
  Sce:  YJL006c YNL025c YPR025c
  Spo:  SPAC1296.05c SPBC12D12.06 SPBC32F12.06 SPBC530.13 SPBP16F5.02
  Ecu:  ECU09g1830
_______

[S] COG5336 Uncharacterized protein conserved in bacteria
  Atu:  AGc1293
  Sme:  SMc00872
  Bme:  BMEI1547
  Mlo:  mlr7410
  Ccr:  CC0369
  Rpr:  RP024
  Rco:  RC0028
_______

[M] COG5337 Spore coat assembly protein
  Mac:  MA2203
  Cgl:  Cgl0060
  Bsu:  BS_cotH
_______

[S] COG5338 Uncharacterized protein conserved in bacteria
  Atu:  AGl2116
  Sme:  SMc04022
  Bme:  BMEII0022
  Mlo:  mlr3024
  Ccr:  CC0163
_______

[S] COG5339 Uncharacterized protein conserved in bacteria
  Dra:  DR2196
  Eco:  ydgA yihF
  EcZ:  ZydgA ZyihF
  Ecs:  ECs2320 ECs4784
  Ype:  YPO2262
  Sty:  STM1466
  Vch:  VC1158
  Hin:  HI1236
  Pmu:  PM0735
  Nme:  NMB1345
  NmA:  NMA1557
_______

[K] COG5340 Predicted transcriptional regulator
  Hbs:  VNG6088C VNG7067 VNG7142
  Pho:  PH0370
  Pab:  PAB2321
  Mtu:  Rv1044
  MtC:  MT1074
_______

[S] COG5341 Uncharacterized protein conserved in bacteria
  Tma:  TM1554
  Fnu:  FN0346
  Lla:  L178600
  Lin:  lin0431 lin2788
_______

[R] COG5342 Invasion protein B, involved in pathogenesis
  Atu:  AGc1396 AGc3259 AGl3087
  Sme:  SMc00071 SMc00950
  Bme:  BMEI1467 BMEI1584 BMEII0692
  Mlo:  mll0513 mll2844 mll3168 mll7488 mlr4445
  Rco:  RC0967
_______

[S] COG5343 Uncharacterized protein conserved in bacteria
  Rso:  RSc2362
  Atu:  AGc3608 AGc840
  Sme:  SMc01725
  Mlo:  mll4823
_______

[S] COG5345 Uncharacterized protein conserved in bacteria
  Pae:  PA4842
  Atu:  AGc4151
  Sme:  SMc02729
  Bme:  BMEI0443
  Mlo:  mlr2761
_______

[S] COG5346 Predicted membrane protein
  Nos:  alr4226
  Nme:  NMB1986
  NmA:  NMA0456
  Rpr:  RP532
  Rco:  RC0766
_______

[U] COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport
  Sce:  YDL226c YDR524c YER122c YGL181w YIL044c YNL204c
  Spo:  SPAC22E12.17c SPAC26A3.10_2 SPAC824.09c SPBC17G9.08c_2 SPBC21D10.05c SPCC622.14
  Ecu:  ECU08g1690 ECU11g0550
_______

[S] COG5349 Uncharacterized protein conserved in bacteria
  Atu:  AGc1409 AGc2394
  Sme:  SMc00014 SMc01366 SMc01488
  Bme:  BMEI1461 BMEII0664
  Mlo:  mlr0842 mlr7498
  Ccr:  CC1021 CC3115 CC3401
_______

[R] COG5350 Predicted protein tyrosine phosphatase
  Lin:  lin0905
  Atu:  AGc1940
  Sme:  SMc00104 SMc02561
  Bme:  BMEI1284
  Mlo:  mll1302
_______

[S] COG5351 Uncharacterized protein conserved in bacteria
  Pae:  PA0097
  Atu:  AGl2375
  Mlo:  mlr2351
_______

[S] COG5352 Uncharacterized protein conserved in bacteria
  Sme:  SMc02139
  Bme:  BMEI1623
  Mlo:  mll5645
  Ccr:  CC1211 CC2245
_______

[S] COG5353 Uncharacterized protein conserved in bacteria
  Lla:  L81319
  Spn:  SP1545
  Lin:  lin2012
  Bsu:  BS_ypmB
  Bha:  BH1694
_______

[R] COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat
  Sce:  YGR054w YOR361c_2
  Spo:  SPAC25G10.08_2 SPBC4B4.04
  Ecu:  ECU11g0670
_______

[S] COG5360 Uncharacterized protein conserved in bacteria
  Atu:  AGc5119
  Sme:  SMc04089
  Bme:  BMEI0234
  Mlo:  mlr4100
  Ccr:  CC0100
_______

[S] COG5361 Uncharacterized conserved protein
  Mac:  MA2325
  Lin:  lin0213 lin1205
  Rso:  RSc0254
  Sme:  SMa0607 SMa0609 SMa0610 SMa1060 SMa1062 SMc00477 SMc01184
        SMc01185 SMc00478
  Mlo:  mll5468 mll5469 mll5470
  Ccr:  CC2518
_______

[R] COG5362 Phage-related terminase
  Mac:  MA3826_2
  Lin:  lin1732_2
  Mlo:  mlr8003_2
  Rco:  RC0490
_______

[R] COG5366 Protein involved in propagation of M2 dsRNA satellite of L-A virus
  Sce:  YNL085w
  Spo:  SPAC139.01c SPAC955.02c
  Ecu:  ECU02g0390
_______

[S] COG5368 Uncharacterized protein conserved in bacteria
  Xfa:  XF2449
  Atu:  AGl3503
  Sme:  SMc01671
  Mlo:  mll5242
_______

[S] COG5369 Uncharacterized conserved protein
  Sce:  YIL017c
  Spo:  SPAC26H5.04
  Ecu:  ECU05g0080
_______

[GO] COG5371 Golgi nucleoside diphosphatase
  Sce:  YEL042w YER005w
  Spo:  SPAC824.08 SPCC11E10.05c
  Ecu:  ECU07g1260
_______

[S] COG5373 Predicted membrane protein
  Ype:  YPO1673
  Pae:  PA5114
  Rso:  RSc0786
  Atu:  AGc1927
  Sme:  SMc02633
  Mlo:  mlr7771 mlr7772
_______

[S] COG5374 Uncharacterized conserved protein
  Sce:  YDL072c YKL065c YMR040w
  Spo:  SPAC9E9.04
  Ecu:  ECU05g0340
_______

[S] COG5375 Uncharacterized protein conserved in bacteria
  Atu:  AGc586
  Sme:  SMc01136
  Bme:  BMEI1792
  Mlo:  mll3200
  Ccr:  CC1168 CC3602
  Rpr:  RP506
  Rco:  RC0660
_______

[L] COG5377 Phage-related protein, predicted endonuclease
  Lin:  lin0084 lin2414
  Bsu:  BS_yqaJ
  Bha:  BH3544
  Xfa:  XF1647
_______

[R] COG5378 Predicted nucleotide-binding protein
  Mja:  MJECL38
  Pab:  PAB0777
  Ape:  APE0472
_______

[I] COG5379 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase
  Xfa:  XF2040
  Atu:  AGc3843
  Sme:  SMc01848
  Mlo:  mlr1574
_______

[O] COG5380 Lipase chaperone
  Vch:  VCA0222
  Pae:  PA2863
  Xfa:  XF1182
_______

[S] COG5381 Uncharacterized protein conserved in bacteria
  Syn:  slr1658
  Sme:  SMb20451
  Mlo:  mll6699
_______

[S] COG5383 Uncharacterized protein conserved in bacteria
  Mtu:  Rv3292
  MtC:  MT3391
  Eco:  ydcJ
  EcZ:  Z2296 Z2297 Z2298
  Ecs:  ECs2028
  Ype:  YPO1397
  Sty:  STM1624
  Sme:  SMc04383
  Bme:  BMEII0389
_______

[J] COG5384 U3 small nucleolar ribonucleoprotein component
  Sce:  YJR002w
  Spo:  SPAC23C11.03
  Ecu:  ECU01g0330
_______

[S] COG5385 Uncharacterized protein conserved in bacteria
  Atu:  AGc4423
  Sme:  SMc00652
  Bme:  BMEI0424
  Mlo:  mlr2813
  Ccr:  CC3470
_______

[M] COG5386 Cell surface protein
  Sau:  SA0977 SA0978
  Lin:  lin2289 lin2290
  Bha:  BH3298 BH3299
_______

[O] COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase
  Sce:  YJL180c
  Spo:  SPAC9.12c
  Atu:  AGc2717
  Sme:  SMc01277
  Bme:  BMEI0980
  Ccr:  CC1977
_______

[S] COG5388 Uncharacterized protein conserved in bacteria
  Atu:  AGc3219
  Sme:  SMc01000
  Bme:  BMEI0738
  Mlo:  mll0186
  Ccr:  CC2640
_______

[S] COG5389 Uncharacterized protein conserved in bacteria
  Atu:  AGc1461
  Sme:  SMc00022
  Bme:  BMEI1441
  Mlo:  mlr7524
  Ccr:  CC0376
_______

[UR] COG5391 Phox homology (PX) domain protein
  Sce:  YDL113c YDR425w YJL036w YMR004w YOR357c
  Spo:  SPAC3A11.06 SPAC6F6.12 SPBC14F5.11c SPBC1711.11 SPBC887.06c SPCC16A11.08 SPCPJ732.01
  Ecu:  ECU05g0840
_______

[S] COG5393 Predicted membrane protein
  Eco:  yqjE
  EcZ:  ZyqjE
  Ecs:  ECs3981
  Ype:  YPO0569a
  Sty:  STM3230
  Pae:  PA3041
  Rso:  RSc0752
_______

[S] COG5394 Uncharacterized protein conserved in bacteria
  Rso:  RSc1634
  Atu:  AGc5019
  Sme:  SMc03880
  Mlo:  mll3846
  Ccr:  CC0509
_______

[S] COG5395 Predicted membrane protein
  Atu:  AGc3952
  Bme:  BMEI0524
  Mlo:  mlr2123
  Ccr:  CC0331
_______

[S] COG5397 Uncharacterized conserved protein
  Atu:  AGl56 AGpA430
  Sme:  SMa0209
  Mlo:  mll9648
  Ccr:  CC0943
_______

[P] COG5398 Heme oxygenase
  Sce:  YLR205c
  Cgl:  Cgl2178
  Syn:  sll1184 sll1875
  Nos:  all1897 alr3125
_______

[S] COG5399 Uncharacterized protein conserved in archaea
  Pya:  PAE2177
  Sso:  SSO0553
  Ape:  APE1817
_______

[S] COG5400 Uncharacterized protein conserved in bacteria
  Atu:  AGc4424
  Sme:  SMc00651
  Bme:  BMEI0425
  Mlo:  mll2811
  Ccr:  CC1035
_______

[R] COG5401 Spore germination protein
  Bsu:  BS_gerM
  Bha:  BH3070
  Syn:  sll0749
  Nos:  alr5055
  Tpa:  TP0832
  Bbu:  BB0507
_______

[S] COG5402 Uncharacterized conserved protein
  Afu:  AF2163
  Atu:  AGc1688
  Sme:  SMc00457
  Bme:  BMEI1352
  Mlo:  mll7656
_______

[S] COG5403 Uncharacterized conserved protein
  Dra:  DR0201
  Sme:  SMc00824
  Mlo:  mll6900
_______

[D] COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation
  Eco:  sulA
  EcZ:  ZsulA
  Ecs:  ECs1042
  Ype:  YPO1436
  Sty:  STM1071
  Pae:  PA3008
_______

[O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit
  Aae:  aq_1671
  Tma:  TM0521
  Sau:  SA1096
  Lin:  lin1317
  Bsu:  BS_clpQ
  Bha:  BH2464
  Eco:  hslV
  EcZ:  ZhslV
  Ecs:  ECs4859
  Ype:  YPO0106
  Sty:  STM4092
  Buc:  BU578
  Vch:  VC2675
  Pae:  PA5053
  Hin:  HI0496
  Pmu:  PM1749
  Xfa:  XF1484
  Rso:  RSc0043 RSc1602
  Hpy:  HP0515
  jHp:  jhp0464
  Cje:  Cj0663c
  Atu:  AGc70
  Sme:  SMc02575
  Bme:  BMEI2047
  Mlo:  mll5007
  Ccr:  CC3727
  Rpr:  RP319
  Rco:  RC0433
  Bbu:  BB0296
_______

[KLB] COG5406 Nucleosome binding factor SPN, SPT16 subunit
  Sce:  YGL207w
  Spo:  SPBP8B7.19
  Ecu:  ECU03g0420
_______

[U] COG5407 Preprotein translocase subunit Sec63
  Sce:  YOR254c
  Spo:  SPBC36B7.03
  Ecu:  ECU06g0870
_______

[T] COG5408 SPX domain-containing protein
  Sce:  YCR037c_1 YIL047c_1 YJL198w_1 YNR013c_1 YPL110c_1
  Spo:  SPBC3B8.04c_1 SPCP1E11.01c_1
  Ecu:  ECU08g1440_1
_______

[T] COG5409 EXS domain-containing protein
  Sce:  YDR414c YIL047c_2
  Spo:  SPAC1D4.05c SPAC227.01c SPCP1E11.01c_2
  Ecu:  ECU08g1440_2
_______

[S] COG5410 Uncharacterized protein conserved in bacteria
  Lin:  lin1732_1
  Xfa:  XF1569 XF1674
  Rco:  RC0488
_______

[T] COG5411 Phosphatidylinositol 5-phosphate phosphatase
  Sce:  YIL002c_2 YNL106c_2 YOL065c YOR109w_2
  Spo:  SPAC9G1.10c SPBC2G2.02_2 SPBC577.13_2
  Ecu:  ECU10g1370
_______

[S] COG5412 Phage-related protein
  Spy:  SPy1448
  Sau:  SA1766_2
  Lin:  lin0168
  Bha:  BH0012 BH0960 BH3518
_______

[S] COG5413 Uncharacterized integral membrane protein
  Syn:  sll1925
  Nos:  all1326
  Hin:  HI0120
  Pmu:  PM0101
_______

[K] COG5414 TATA-binding protein-associated factor
  Sce:  YMR227c
  Spo:  SPAC13F5.02c
  Ecu:  ECU05g0520
_______

[R] COG5415 Predicted integral membrane metal-binding protein
  Sce:  YHR192w
  Spo:  SPCC1620.07c
  Ecu:  ECU09g0710
_______

[S] COG5416 Uncharacterized integral membrane protein
  Cgl:  Cgl1974
  Mtu:  Rv3760
  MtC:  MT3867
  Mle:  ML2366
  Lin:  lin1561
  Bsu:  BS_yrvD
  Bha:  BH1239
  Nme:  NMB0338
  NmA:  NMA2149
  Rso:  RSc0911
_______

[S] COG5417 Uncharacterized small protein
  Sau:  SA0274
  Lin:  lin0052
  Bsu:  BS_yukD
  Bha:  BH0973
_______

[S] COG5418 Predicted secreted protein
  Mac:  MA1976
  Mja:  MJ0003
  Pho:  PH0579
  Pab:  PAB0939
_______

[S] COG5419 Uncharacterized conserved protein
  Ype:  YPO0498
  Rso:  RSc2608
  Mlo:  mlr6104 mlr9734 msr9733
  Ccr:  CC2716 CC2717
_______

[S] COG5420 Uncharacterized conserved small protein containing a coiled-coil domain
  Nos:  asl1434
  Sme:  SMa0833
  Mlo:  msr5868 msr5928
_______

[L] COG5421 Transposase
  Mac:  MA1055 MA1060 MA1290 MA1629 MA1638 MA2007 MA2074
        MA2188 MA2670 MA2740 MA2942 MA2965 MA3338 MA3502
        MA3745 MA3771 MA3800 MA3820
  Tvo:  TVN0161 TVN0868
  Nos:  all7625
_______

[T] COG5422 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
  Sce:  YGR070w YLR371w
  Spo:  SPAC1006.06 SPCC645.07
  Ecu:  ECU03g0550
_______

[S] COG5423 Predicted metal-binding protein
  Afu:  AF0391
  Mac:  MA0666 MA1947 MA4233
  Pho:  PH1318
  Pab:  PAB1808
_______

[H] COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
  Tac:  Ta0939
  Sso:  SSO2700
  Pae:  PA0862 PA1987
  Sme:  SMb20206
  Rco:  RC0033
  Ctr:  CT610
  Cpn:  CPn0761
_______

[E] COG5425 Usg protein, probable subunit of phosphoribosylanthranilate isomerase
  Atu:  AGc3453
  Sme:  SMb21568 SMc00137
  Bme:  BMEI0239
  Mlo:  mll4088 msl2390
  Ccr:  CC3546
_______

[S] COG5426 Uncharacterized membrane protein
  Sty:  STM1381 STM3548
  Atu:  AGl3482
  Mlo:  mll7663
_______

[S] COG5427 Uncharacterized membrane protein
  Afu:  AF0583
  Hbs:  VNG0555C
  Mac:  MA4078
_______

[S] COG5428 Uncharacterized conserved small protein
  Afu:  AF0804
  Pho:  PHS011
  Pya:  PAE0420 PAE0427
  Cgl:  Cgl1307
  Bsu:  BS_yuzE
  Syn:  ssr1768
_______

[S] COG5429 Uncharacterized secreted protein
  Rso:  RSc1589
  Atu:  AGc4864
  Sme:  SMc03845
  Bme:  BMEI1856
  Mlo:  mll4533 mlr4337
  Ccr:  CC3666
_______

[S] COG5430 Uncharacterized secreted protein
  Ype:  YPO1695 YPO1698 YPO1699 YPO1700
  Pae:  PA4648 PA4649 PA4650 PA4653
  Rso:  RSc2692 RSc2695 RSc2696 RSp1497 RSp1500
  Atu:  AGl295 AGl303
  Mlo:  mll7723 mll7726
  Rco:  RC0638 RC0646
_______

[S] COG5431 Uncharacterized metal-binding protein
  Afu:  AF1109
  Sso:  SSO0261
  Ape:  APE0663
_______

[T] COG5432 RING-finger-containing E3 ubiquitin ligase
  Sce:  YCR066w
  Spo:  SPBC1734.06
  Ecu:  ECU09g0625
_______

[L] COG5433 Transposase
  Spy:  SPy0303 SPy1574 SPy1807 SPy2180
  Nos:  all8064 all8065 asr2499
  Eco:  b1458 b1459 ybfD ybfL ydcC yhhI
  EcZ:  Z0271 Z0275 Z0700 Z0854 Z0856 Z0857 Z2253
        Z2254
  Ecs:  ECs0241 ECs0245 ECs0602 ECs0731 ECs2062 ECs2063 ECs2832
        ECs2833
  Sme:  SMb20421 SMc01466 SMc03886 SMc03892
_______

[M] COG5434 Endopolygalacturonase
  Sce:  YJR153w
  Tma:  TM0437
  Cac:  CAC0355 CAC3684
  Spn:  SP1833
  Rso:  RSc1756 RSp0833 RSp0880
  Atu:  AGl183 AGl3361 AGl619
  Ccr:  CC0572
_______

[S] COG5435 Uncharacterized conserved protein
  EcZ:  Z0706
  Ecs:  ECs0606
  Ype:  YPO2954 YPO3607 YPO3614
  Sty:  STM0290
  Pae:  PA0094
  Rso:  RSc3427 RSp1138
_______

[S] COG5436 Predicted integral membrane protein
  Afu:  AF2162
  Sme:  SMc00128
  Bme:  BMEI1353
  Mlo:  mll7655
_______

[S] COG5437 Predicted secreted protein
  Lin:  lin0165
  Bha:  BH3521
  Atu:  AGc1757
  Bme:  BMEI1347
  Ccr:  CC2781
_______

[S] COG5438 Predicted multitransmembrane protein
  Fnu:  FN1980
  Cac:  CAC0206 CAC0889 CAC0890 CAC2436
  Cgl:  Cgl2787
  Lla:  L16606 L17781
  Sau:  SA0427 SA0428
_______

[S] COG5439 Uncharacterized conserved protein
  Syn:  slr1659
  Sme:  SMb20452
  Mlo:  mll6698
_______

[S] COG5440 Uncharacterized conserved protein
  Afu:  AF2410
  Mth:  MTH1410
  Sso:  SSO2790 SSO3186
  Ape:  APE1699
_______

[S] COG5441 Uncharacterized conserved protein
  Ype:  YPO3839
  Sme:  SMa1334
  Bme:  BMEII0128
  Mlo:  mll9388 mlr3387
_______

[N] COG5442 Flagellar biosynthesis regulator FlaF
  Atu:  AGc1017
  Sme:  SMc03050
  Bme:  BMEII0162
  Mlo:  mlr2940
  Ccr:  CC1459
_______

[N] COG5443 Flagellar biosynthesis regulator FlbT
  Atu:  AGc1018
  Sme:  SMc03051
  Bme:  BMEII0163
  Mlo:  mlr2941
  Ccr:  CC1458
_______

[S] COG5444 Uncharacterized conserved protein
  Sau:  SA0281
  Lin:  lin0059
  Bsu:  BS_yeeF BS_yobL BS_yokI BS_yqcG BS_ywqJ BS_yxiD
  Bha:  BH0978 BH2344 BH2523 BH3705 BH3991 BH3992 BH4017
_______

[S] COG5445 Predicted secreted protein
  Eco:  yfaQ
  EcZ:  Z3479 Z3480
  Ecs:  ECs3109 ECs3110
  Pae:  PA4488
  Rso:  RSc0320 RSc3029
_______

[S] COG5446 Predicted integral membrane protein
  Pae:  PA2946
  Atu:  AGc1613
  Bme:  BMEI0692
  Mlo:  mll1309
_______

[S] COG5447 Uncharacterized conserved protein
  Atu:  AGc1681
  Sme:  SMc00061
  Bme:  BMEI1355
  Mlo:  mlr7652
  Ccr:  CC1065
_______

[S] COG5448 Uncharacterized conserved protein
  Atu:  AGc1766
  Bme:  BMEI1344
  Ccr:  CC2777
  Rco:  RC0770
_______

[S] COG5449 Uncharacterized conserved protein
  Atu:  AGc1769
  Bme:  BMEI1343
  Ccr:  CC2776
  Rco:  RC0768
_______

[K] COG5450 Transcription regulator of the Arc/MetJ class
  Mtu:  Rv0657c Rv1560 Rv2009 Rv2375 Rv2545 Rv2758c
  MtC:  MT0662.1 MT0686 MT1611 MT2064.1 MT2444 MT2621 MT2828
  Mle:  ML1911A
  Atu:  AGc1846
  Ccr:  CC2983
_______

[S] COG5451 Predicted secreted protein
  Atu:  AGc1949
  Sme:  SMc02555
  Bme:  BMEI1277
  Mlo:  mll7793
  Ccr:  CC3376
_______

[S] COG5452 Uncharacterized conserved protein
  Atu:  AGc2173
  Sme:  SMc01782
  Bme:  BMEI1183
  Mlo:  mlr8420
  Ccr:  CC1366
_______

[S] COG5453 Uncharacterized conserved protein
  Vch:  VCA0562
  Atu:  AGc2227
  Sme:  SMc00935
  Bme:  BMEI0533
  Mlo:  msl2450
_______

[S] COG5454 Predicted secreted protein
  Atu:  AGc2369
  Sme:  SMc01931
  Bme:  BMEI1141
  Mlo:  msl1345
  Ccr:  CC1932
_______

[S] COG5455 Predicted integral membrane protein
  Eco:  yohN
  EcZ:  Z3275
  Ecs:  ECs2913
  Sty:  STM2148
  Rso:  RSc0815
  Atu:  AGc2812
  Sme:  SMc04246
  Bme:  BMEII0733
  Mlo:  mll2469
  Ccr:  CC2435
_______

[P] COG5456 Predicted integral membrane protein linked to a cation pump
  Atu:  AGc2820
  Sme:  SMa1210
  Bme:  BMEI1568
  Mlo:  mll6625 mlr6416
  Ccr:  CC1406
_______

[S] COG5457 Uncharacterized conserved small protein
  Eco:  yjiS
  EcZ:  ZyjiS
  Ecs:  ECs5303
  Sty:  STM4521
  Pae:  PA2845 PA5446 PA5460
  Atu:  AGc3067 AGc3387
  Sme:  SMc00491 SMc01199 SMc02051 SMc02052 SMc02900
  Bme:  BMEI1072
  Mlo:  msl3766 msr0060 msr1062 msr3036 msr4656
_______

[S] COG5458 Uncharacterized conserved protein
  Atu:  AGc3227
  Sme:  SMc00995
  Bme:  BMEI0812
  Mlo:  mll0669
  Ccr:  CC2167
_______

[J] COG5459 Predicted rRNA methylase
  Sce:  YKL155c
  Spo:  SPAC1420.04c_1
  Bme:  BMEI0444
  Mlo:  mll7840
_______

[S] COG5460 Uncharacterized conserved protein
  Bha:  BH0233
  Ype:  YPO2231
  Atu:  AGc3742
  Ccr:  CC0773
_______

[N] COG5461 Type IV pili component
  Atu:  AGc378
  Sme:  SMc04110
  Mlo:  mlr5598 mlr8762
  Ccr:  CC2944
_______

[S] COG5462 Predicted secreted (periplasmic) protein
  Atu:  AGc3812
  Sme:  SMc01859
  Bme:  BMEI0572
  Mlo:  mll1563
  Rpr:  RP568
  Rco:  RC0856
_______

[S] COG5463 Predicted integral membrane protein
  Eco:  ygiB yjfM
  EcZ:  ZygiB ZyjfM
  Ecs:  ECs3925 ECs5161
  Ype:  YPO0661
  Sty:  STM3187 STM4375
  Atu:  AGc3818
  Ccr:  CC2366
_______

[S] COG5464 Uncharacterized conserved protein
  Syn:  sll1201 sll1542 sll1774 slr1712
  Nos:  all2115 all2177 all2183 all2624 all2703 all2992 all3819
        all3837 all3894 all4184 alr2136 alr2577 alr2606 alr4275
        asr2348 asr2605 asr2607 asr2666 asr2667 asr3001 asr4997
  Eco:  yadD yfaD yfcI yhgA yjiQ
  EcZ:  Z5940 ZyadD ZyfaD ZyfcI ZyhgA
  Ecs:  ECs0136 ECs3129 ECs3189 ECs4253 ECs5301
  Ype:  YPMT1.71 YPO0076
  Sty:  PSLT051 STM0479 STM3508 STM3766
  Rco:  RC0439
_______

[S] COG5465 Uncharacterized conserved protein
  Atu:  AGc4016
  Sme:  SMc02678
  Bme:  BMEI0490
  Mlo:  mll2674
  Ccr:  CC0493
  Ctr:  CT260
  Cpn:  CPn0409
_______

[S] COG5466 Predicted small metal-binding protein
  Mac:  MA4213
  Tac:  Ta1144a
  Tvo:  TVN1242
  Sso:  SSO1877 SSO9115
  Atu:  AGc4091
  Sme:  SMc02699
  Mlo:  msr2723
_______

[S] COG5467 Uncharacterized conserved protein
  Sme:  SMc00496
  Bme:  BMEI1121
  Mlo:  mlr0071
  Ccr:  CC2490
_______

[S] COG5468 Predicted secreted (periplasmic) protein
  Atu:  AGc4986
  Sme:  SMc02803
  Bme:  BMEI0243
  Mlo:  mll4075
  Ccr:  CC3750
_______

[S] COG5469 Predicted metal-binding protein
  Syn:  slr1493
  Nos:  all1781 all2156 alr2594 alr4027
  Atu:  AGc5089
  Mlo:  mlr1374 mlr8225
_______

[S] COG5470 Uncharacterized conserved protein
  Mac:  MA2290
  Rso:  RSc1128
  Atu:  AGc513
  Sme:  SMa0323 SMc00411
  Bme:  BMEI1998
  Mlo:  mll1854 mll3541 mlr5013 msl4750 msl7859
_______

[S] COG5471 Uncharacterized conserved protein
  EcZ:  Z0968 Z3091
  Ecs:  ECs0830 ECs2956
  Sty:  STM1034
  Xfa:  XF0512
  Atu:  AGc804
_______

[S] COG5472 Predicted small integral membrane protein
  Ype:  YPO0899
  Rso:  RSp0688
  Cje:  Cj1158c Cj1160c
_______

[S] COG5473 Predicted integral membrane protein
  Cgl:  Cgl1880
  Mtu:  Rv2560
  MtC:  MT2637
  Atu:  AGl1111
  Sme:  SMa0620 SMc00506
  Mlo:  mll1046 mlr8238
_______

[S] COG5474 Uncharacterized conserved protein
  Syn:  slr1097
  Nos:  all5169
  Vch:  VCA0374
_______

[S] COG5475 Uncharacterized small protein
  Eco:  yodC
  EcZ:  Z3048
  Ecs:  ECs2695
  Sty:  STM1988
  Atu:  AGl17
  Mlo:  mll5459
_______

[S] COG5476 Uncharacterized conserved protein
  Rso:  RSp1573
  Atu:  AGc4702 AGl1835
  Sme:  SMb21155 SMb21161
  Bme:  BMEII0539
  Mlo:  mll4144 mll6059 mll6676 mlr5988 mlr6294 msl6060
_______

[S] COG5477 Predicted small integral membrane protein
  Rso:  RSc3050
  Atu:  AGl1911
  Sme:  SMc02515
  Mlo:  msl0703
_______

[S] COG5478 Predicted small integral membrane protein
  Sce:  YMR319c
  Spo:  SPBP26C9.03c
  Pae:  PA2187
  Atu:  AGl2041 AGpA399
  Sme:  SMb20908 SMb21472
  Mlo:  mll1528 mll2106 mlr2105 mlr8076 mlr9674
_______

[M] COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis
  Mac:  MA1510_2
  Dra:  DR1115
  Cgl:  Cgl0771 Cgl1439 Cgl1790 Cgl1798 Cgl1842 Cgl2494 Cgl2815_2
        Cgl2827
  Mtu:  Rv2721c Rv3811
  MtC:  MT2794 MT3918
  Mle:  ML1002
_______

[S] COG5480 Predicted integral membrane protein
  Syn:  sll1837
  Atu:  AGl2147
  Sme:  SMc04006
  Bme:  BMEI0291
  Mlo:  mll3821 mlr2364
_______

[S] COG5481 Uncharacterized conserved small protein containing a coiled-coil domain
  Atu:  AGl2160
  Sme:  SMc04000
  Bme:  BMEI0297
  Mlo:  msr3794
  Ccr:  CC3288
_______

[S] COG5482 Uncharacterized conserved protein
  Cac:  CAC3013
  Atu:  AGl2570
  Sme:  SMa0254
  Mlo:  mlr0494
_______

[S] COG5483 Uncharacterized conserved protein
  Mac:  MA3154
  Pya:  PAE0614
  Ape:  APE2246
_______

[S] COG5484 Uncharacterized conserved protein
  Lin:  lin1266 lin1733 lin2395
  Bsu:  BS_yjcR BS_yqaS
  Rso:  RSc1939
_______

[R] COG5485 Predicted ester cyclase
  Nos:  all4540
  Pae:  PA1401
  Rso:  RSc0819
  Atu:  AGl3571
  Sme:  SMa1589
  Mlo:  mlr2224
_______

[S] COG5486 Predicted metal-binding integral membrane protein
  Rso:  RSp0711
  Sme:  SMc02859
  Mlo:  mll0509 mll6464 mlr8147
_______

[S] COG5487 Small integral membrane protein
  EcZ:  Z5978
  Ype:  YPO0432
  Sty:  STM4562
  Pae:  PA5482
  Rso:  RSp1666
  Atu:  AGl805
  Sme:  SMb20084 SMc00796
  Bme:  BMEI0373
  Mlo:  msr3702
_______

[S] COG5488 Integral membrane protein
  Rso:  RSc0361
  Atu:  AGl819
  Sme:  SMc02842
  Bme:  BMEI1783
  Mlo:  mlr3177
  Ccr:  CC3730
_______

[S] COG5489 Uncharacterized conserved protein
  Rso:  RSc2613
  Atu:  AGpT209 AGpT217
  Sme:  SMa0922
  Mlo:  mll9301 mlr6185 mlr9738 mlr9743
  Ccr:  CC2683
_______

[S] COG5490 Uncharacterized conserved protein
  Sme:  SMc00777
  Mlo:  mll1145 mlr6541
  Ccr:  CC2160
_______

[N] COG5491 Conserved protein implicated in secretion
  Sso:  SSO0451 SSO0619 SSO0881 SSO0910
  Ape:  APE0143 APE1975
  Sce:  YKL002w YKL041w YKR035w-a
  Spo:  SPAC4F8.01 SPAC9E9.14 SPBC13G1.12
_______

[N] COG5492 Bacterial surface proteins containing Ig-like domains
  Cac:  CAC0551 CAC0552 CAC1389 CAC2107 CAC2367 CAC3085 CAC3086
        CAC3272_1 CAC3273_1 CAC3274_1 CAC3275 CAC3278 CAC3279_1 CAC3280_1
        CAC3565 CAP0002_1 CAP0003_1 CAP0160
  Lin:  lin2385
  Bsu:  BS_yjdB
  EcZ:  Z0972 Z1894 Z2137 Z2358 Z3087
  Ecs:  ECs0834 ECs1111 ECs1640 ECs2169 ECs2729 ECs2952
  Ype:  YPMT1.14c YPMT1.20c YPO2110 YPO2116
  Sty:  STM0916 STM1038 STM2597
_______

[S] COG5493 Uncharacterized conserved protein containing a coiled-coil domain
  Pya:  PAE0355 PAE1883
  Sso:  SSO1344 SSO2946
  Ape:  APE1221
_______

[O] COG5494 Predicted thioredoxin/glutaredoxin
  Pya:  PAE3153
  Sso:  SSO0314
  Ape:  APE1701
_______

[S] COG5495 Uncharacterized conserved protein
  Tma:  TM1727
  Mtu:  Rv3603c
  MtC:  MT3708
  Mle:  ML0229
  Rso:  RSp0668
_______

[R] COG5496 Predicted thioesterase
  Mac:  MA0038
  Sso:  SSO8469
  Ape:  APE2499
  Tma:  TM0581
  Fnu:  FN0889
  Dra:  DR2608
  Cgl:  Cgl0452
  Spy:  SPy1339
_______

[S] COG5497 Predicted secreted protein
  Dra:  DR1425 DRB0116
  Sme:  SMc00510
  Mlo:  mll0081 msr5287
  Tpa:  TP1002
  Bbu:  BB0403
_______

[M] COG5498 Predicted glycosyl hydrolase
  Sce:  YLR144c YNR067c
  Spo:  SPAC23D3.10c SPAC821.09
  Bha:  BH0236
_______

[K] COG5499 Predicted transcription regulator containing HTH domain
  Nos:  all4855
  Eco:  ygjM
  EcZ:  ZygjM
  Ecs:  ECs3964
  Sty:  STM4030
  Sme:  SMc00823
  Mlo:  mll1856
_______

[S] COG5500 Predicted integral membrane protein
  Nos:  all1149
  Sme:  SMc01670
  Mlo:  mlr3943
_______

[S] COG5501 Predicted secreted protein
  Aae:  aq_1810
  Rso:  RSc3259
  Sme:  SMb20167
_______

[S] COG5502 Uncharacterized conserved protein
  Aae:  aq_888
  Nos:  all1996 all3586 alr0892
  Sme:  SMc01008 SMc01448
  Mlo:  mll6598
_______

[S] COG5503 Uncharacterized conserved small protein
  Lla:  L91273
  Spy:  SPy1875
  Spn:  SP0122
  Sau:  SA0941
  Lin:  lin1027
  Bsu:  BS_ykzG
  Bha:  BH2661
_______

[O] COG5504 Predicted Zn-dependent protease
  Dra:  DR0445
  Sau:  SA2177
  Bsu:  BS_yjaZ BS_yjfC
  Bha:  BH2873
_______

[S] COG5505 Predicted integral membrane protein
  Pab:  PAB0088
  Fnu:  FN1585
  Bsu:  BS_yjcL
  Bha:  BH3005
_______

[S] COG5506 Uncharacterized conserved protein
  Spy:  SPy0729
  Spn:  SP1127
  Lin:  lin2086
  Bsu:  BS_yueI
  Bha:  BH3352
_______

[S] COG5507 Uncharacterized conserved protein
  Eco:  ybaA
  EcZ:  ZybaA
  Ecs:  ECs0509
  Sme:  SMc01560
  Mlo:  mll7839 mlr2642
_______

[S] COG5508 Uncharacterized conserved small protein
  Xfa:  XF1069
  Sme:  SMc04092
  Bme:  BMEI0237
  Mlo:  msl4095
  Ccr:  CC0103
  Rpr:  RP167
  Rco:  RC0209
_______

[S] COG5509 Uncharacterized small protein containing a coiled-coil domain
  Sme:  SMc03988
  Bme:  BMEI0301
  Mlo:  msr3768
  Ccr:  CC3294
_______

[S] COG5510 Predicted small secreted protein
  EcZ:  ZecnA
  Sty:  STM4335 STM4336
  Rso:  RSc0290 RSp1210
  Bme:  BMEI0687
  Ccr:  CC3473
  Rco:  RC1154
_______

[R] COG5511 Bacteriophage capsid protein
  EcZ:  Z0965 Z0966 Z1885 Z2113 Z2114 Z2133 Z2362
        Z3098
  Ecs:  ECs0827 ECs0828 ECs1107 ECs1632 ECs2177 ECs2733 ECs2961
  Sty:  STM0911 STM1032 STM2606
  Xfa:  XF0510 XF0713 XF2498
  Rso:  RSc0854 RSc0857
  Bme:  BMEI1246
_______

[R] COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
  Tma:  TM0832
  Dra:  DR1088
  Cgl:  Cgl0004
  Mtu:  Rv0004
  MtC:  MT0004
  Mle:  ML0004
  Syn:  slr0363
  Nos:  alr2345
_______

[S] COG5513 Predicted secreted protein
  Mac:  MA0215 MA1593 MA1599 MA4028 MA4585
  Cac:  CAC2467
  Pae:  PA0778
_______

[S] COG5514 Uncharacterized conserved protein
  Rso:  RSc1856
  Bme:  BMEI1724
  Mlo:  mll0991
_______

[S] COG5515 Uncharacterized conserved small protein
  Cac:  CAC1955
  Sme:  SMc03792
  Bme:  BMEII0414
  Mlo:  msr4423
_______

[R] COG5516 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
  Rso:  RSp0306
  Sme:  SMc00597
  Mlo:  mll9714 mlr5173
_______

[Q] COG5517 Small subunit of phenylpropionate dioxygenase
  Cgl:  Cgl2353
  Eco:  hcaA2
  EcZ:  ZhcaA2
  Ecs:  ECs3405
  Pae:  PA2085 PA2513 PA2517
  Rso:  RSc1089
_______

[R] COG5518 Bacteriophage capsid portal protein
  Lin:  lin1268
  Bsu:  BS_xkdE BS_yqbA
  Sty:  STM2723
  Rso:  RSc1941
_______

[L] COG5519 Superfamily II helicase and inactivated derivatives
  Mac:  MA1895 MA2235 MA4137
  Sau:  SA0059 SA0073 SA1828
  EcZ:  Z1843
  Ecs:  ECs1583 ECs1584
  Ype:  YPO1259
  Sty:  STM2745
  Pmu:  PM1782
_______

[M] COG5520 O-Glycosyl hydrolase
  Cac:  CAP0118 CAP0119
  Bsu:  BS_ynfF
  Sty:  STM4426
  Ccr:  CC1757
_______

[S] COG5521 Predicted integral membrane protein
  Spy:  SPy1298
  Spn:  SP2111
  Lin:  lin2227
  Bsu:  BS_yvdJ
_______

[S] COG5522 Predicted integral membrane protein
  Fnu:  FN0996
  Cgl:  Cgl1060
  Bsu:  BS_ywaF
  Tpa:  TP0381
_______

[S] COG5523 Predicted integral membrane protein
  Cac:  CAC2648 CAC2649
  Lla:  L156674
  Spy:  SPy0201
  Spn:  SP2059
  Lin:  lin0656
_______

[R] COG5524 Bacteriorhodopsin
  Hbs:  VNG0180G VNG1467G VNG1660G VNG1764G
  Sce:  YBR054w YCR021c YDR033w
  Spo:  SPCC31H12.02c
  Nos:  alr3165
_______

[R] COG5525 Bacteriophage tail assembly protein
  Lin:  lin0100
  Nos:  all7676
  Eco:  ybcX
  EcZ:  Z0964 Z1883 Z2116 Z2131 Z2364 Z3099
  Ecs:  ECs0825 ECs1106 ECs1630 ECs2179 ECs2735 ECs2963
  Sty:  STM0910 STM1031 STM2608
  Xfa:  XF0508 XF0711 XF2120 XF2500
  Rso:  RSc0853
_______

[S] COG5526 Uncharacterized conserved protein
  Nos:  alr0668
  Mlo:  mll7072_1
  Ccr:  CC0548
_______

[L] COG5527 Protein involved in initiation of plasmid replication
  Cac:  CAP0175
  Sau:  SAP027
  Lin:  pli0023
  Nme:  NMB0495
_______

[S] COG5528 Predicted integral membrane protein
  Pae:  PA0332
  Sme:  SMb20414
  Ccr:  CC2898
_______

[R] COG5529 Pyocin large subunit
  Mac:  MA2041
  Ecs:  ECs1768
  Ype:  YPO0873
  Ccr:  CC3711
_______

[S] COG5530 Predicted integral membrane protein
  Dra:  DR0106
  Sme:  SMc00135
  Mlo:  mlr2267
_______

[B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling
  Sce:  YCR052w YMR233w YNR023w YOR295w
  Spo:  SPAC23G3.10c SPCC285.17
  Ecu:  ECU04g1200
  Ctr:  CT460 CT643_3
  Cpn:  CPn0577 CPn0769_3
_______

[S] COG5532 Uncharacterized conserved protein
  Eco:  yfdQ
  Xfa:  XF1649
  Nme:  NMB0906
_______

[O] COG5533 Ubiquitin C-terminal hydrolase
  Sce:  YER144c
  Spo:  SPBC18H10.08c
  Ecu:  ECU07g0410
_______

[L] COG5534 Plasmid replication initiator protein
  Dra:  DRA0369 DRB0145
  Rso:  RSc2606
  Mlo:  mlr9740
_______

[L] COG5535 DNA repair protein RAD4
  Sce:  YDR314c YER162c
  Spo:  SPAC12B10.12c SPCC4G3.10c
  Ecu:  ECU01g0450
_______

[O] COG5536 Protein prenyltransferase, alpha subunit
  Sce:  YJL031c YKL019w
  Spo:  SPAPB1A10.04c SPCC1620.05
  Ecu:  ECU02g1060
_______

[D] COG5537 Cohesin
  Sce:  YIL026c
  Spo:  SPAC17H9.20 SPCC4E9.01c
  Ecu:  ECU04g0870
_______

[U] COG5538 Preprotein translocase subunit Sec66
  Sce:  YBR171w
  Spo:  SPBC409.21
  Ecu:  ECU04g0940
_______

[O] COG5539 Predicted cysteine protease (OTU family)
  Sce:  YFL044c YHL013c
  Spo:  SPAC1952.03 SPAC24C9.14
  Ecu:  ECU05g0570
_______

[O] COG5540 RING-finger-containing ubiquitin ligase
  Sce:  YKL034w
  Spo:  SPAC57A7.09
  Ecu:  ECU07g0330
_______

[O] COG5541 Vesicle coat complex COPI, zeta subunit
  Sce:  YPL010w
  Spo:  SPCC576.07
  Ecu:  ECU08g0680
_______

[S] COG5542 Predicted integral membrane protein
  Sce:  YBR004c
  Spo:  SPAC18B11.05
  Ecu:  ECU09g0560
  Cac:  CAC0354
  Nos:  all4348 all4349 all4350
_______

[S] COG5543 Uncharacterized conserved protein
  Sce:  YMR259c
  Spo:  SPCC1494.07
  Ecu:  ECU09g1670
_______

[R] COG5544 Predicted periplasmic lipoprotein
  Eco:  yfiM
  EcZ:  ZyfiM
  Ecs:  ECs3453
  Ype:  YPO3274
  Sty:  STM2653
  Pae:  PA0488
  Rso:  RSp0957
_______

[R] COG5545 Predicted P-loop ATPase and inactivated derivatives
  Lla:  L109011
  Nos:  all8519
  Xfa:  XF0506 XF2121
_______

[S] COG5546 Small integral membrane protein
  Spy:  SPy0707 SPy1440
  Sau:  SA1760
  Lin:  lin1295 lin1702
_______

[S] COG5547 Small integral membrane protein
  Lla:  L66209
  Spy:  SPy1263
  Spn:  SP1803
  Sau:  SA1985
_______

[S] COG5548 Small integral membrane protein
  Sce:  YJR085c
  Spo:  SPAP14E8.05c
  Nos:  alr2462
_______

[O] COG5549 Predicted Zn-dependent protease
  Mac:  MA4674
  Spn:  SP0617
  Syn:  slr1946
  Nos:  all4180
_______

[O] COG5550 Predicted aspartyl protease
  Pya:  PAE0531 PAE0993 PAE2856
  Sso:  SSO1395 SSO2164
  Nos:  all7265 all7364 alr3004
_______

[S] COG5551 Uncharacterized conserved protein
  Afu:  AF1859
  Pya:  PAE0075 PAE0129 PAE0131 PAE0181 PAE0212
  Sso:  SSO1381 SSO1406
  Mtu:  Rv2824c
  MtC:  MT2891
  Nos:  alr1482 alr1566
_______

[S] COG5552 Uncharacterized conserved protein
  MtC:  MT2896
  Sme:  SMa0044
  Mlo:  msr7471
_______

[R] COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily
  Nos:  alr2518
  Pae:  PA2602
  Mlo:  mll4748
_______

[Q] COG5554 Nitrogen fixation protein
  Nos:  asr1409
  Sme:  SMa0810
  Mlo:  msl5852
_______

[N] COG5555 Cytolysin, a secreted calcineurin-like phosphatase
  Nos:  alr1329
  Sme:  SMc03166
  Mlo:  mlr8178
_______

[S] COG5556 Uncharacterized conserved protein
  Ype:  YPO2102
  Sme:  SMa0731 SMb20839
  Mlo:  mlr8001
_______

[C] COG5557 Polysulphide reductase
  Afu:  AF0174 AF0500
  Hbs:  VNG0831G
  Eco:  hybB
  EcZ:  ZhybB
  Ecs:  ECs3880
  Sty:  STM3148
_______

[L] COG5558 Transposase
  Afu:  AF0279 AF0306 AF0642 AF0858 AF2092 AF2222
  Tvo:  TVN0141 TVN0142
  Sso:  SSO1387
_______

[S] COG5559 Uncharacterized conserved small protein
  Afu:  AF0301 AF0368
  Pab:  PAB7298
  Syn:  ssl2138
_______

[O] COG5560 Ubiquitin C-terminal hydrolase
  Sce:  YJL197w
  Spo:  SPCC1494.05c SPCC16A11.12c
  Ecu:  ECU06g0910
_______

[S] COG5561 Predicted metal-binding protein
  Afu:  AF1756
  Mac:  MA3162
  Mja:  MJ0582 MJ0766
_______

[R] COG5562 Phage envelope protein
  Mtu:  Rv2012
  MtC:  MT2067
  Lla:  L58584
  Sau:  SA0336
  Eco:  ybcV ycgX ydfO
  EcZ:  Z1879
  Ecs:  ECs1626
  Sty:  STM1856
_______

[S] COG5563 Predicted integral membrane proteins containing uncharacterized repeats
  Mac:  MA0957
  Nos:  all7024
  Xfa:  XF2021 XF2349_1
  Atu:  AGc1421
  Cpn:  CPn0794 CPn0795 CPn0796 CPn0797 CPn0798 CPn0799
_______

[R] COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase
  Ype:  YPO3838
  Sme:  SMa1332
  Mlo:  mll9384_1 mll9387 mlr3388 mlr9389
_______

[R] COG5565 Bacteriophage terminase large (ATPase) subunit and inactivated derivatives
  Xfa:  XF1238 XF1239
  Sme:  SMc04187
  Mlo:  mll1771 msl1767
_______

[S] COG5566 Uncharacterized conserved protein
  Ecs:  ECs4961
  Sty:  STM4219
  Vch:  VC1795 VC1796
  Hin:  HI1491m
_______

[N] COG5567 Predicted small periplasmic lipoprotein
  Eco:  yifL
  EcZ:  Z5325
  Ype:  YPO3846
  Sty:  STM3946
  Pae:  PA5276
  Bme:  BMEI0085
_______

[S] COG5568 Uncharacterized small protein
  Atu:  AGc659
  Sme:  SMc01107
  Bme:  BMEI1785
  Mlo:  msr3193
  Ccr:  CC3593
_______

[S] COG5569 Uncharacterized conserved protein
  Eco:  ylcC
  EcZ:  ZylcC
  Ecs:  ECs0611
  Rso:  RSp0929
  Atu:  AGl1727
  Sme:  SMa1043 SMc02284
_______

[S] COG5570 Uncharacterized small protein
  Sme:  SMc03999
  Bme:  BMEI0299
  Mlo:  msl3793
  Ccr:  CC3291
_______

[N] COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion
  Eco:  yhjY
  EcZ:  ZyhjY
  Ecs:  ECs4433
  Sty:  STM0570_2 STM3641
  Pae:  PA0328_2
  Pmu:  PM0076_2
  Xfa:  XF0781_2
_______

[S] COG5572 Predicted integral membrane protein
  Rso:  RSp1034
  Sme:  SMb20530
  Ccr:  CC3254
_______

[R] COG5573 Predicted nucleic-acid-binding protein, contains PIN domain
  Ape:  APE1588
  Nos:  alr0504 alr3622
  Rso:  RSc3055
  Sme:  SMc03137
_______

[O] COG5574 RING-finger-containing E3 ubiquitin ligase
  Sce:  YDR265w YER116c
  Spo:  SPAC6B12.07c SPBC17A3.10 SPBC3D6.11c
  Ecu:  ECU11g1130
_______

[L] COG5575 Origin recognition complex, subunit 2
  Sce:  YBR060c
  Spo:  SPBC685.09
  Ecu:  ECU10g1130
_______

[K] COG5576 Homeodomain-containing transcription factor
  Sce:  YDL106c YDR451c YML027w
  Spo:  SPAC32A11.03c SPBC21B10.13c
  Ecu:  ECU02g1200 ECU03g0600 ECU03g0610 ECU03g1170 ECU04g0970 ECU04g1030 ECU06g0500
        ECU09g0970 ECU10g1470
_______

[M] COG5577 Spore coat protein
  Cac:  CAC0613 CAC0614 CAC1335 CAC2615 CAC2780 CAC3317
  Sau:  SA1822
  Bsu:  BS_cotF BS_yhcQ BS_yraD BS_yraF
  Bha:  BH0743 BH3888
_______

[S] COG5578 Predicted integral membrane protein
  Lla:  L121071
  Spy:  SPy1589
  Spn:  SP0154
  Lin:  lin2120
  Bsu:  BS_yesL BS_yesV BS_yteU
  Bha:  BH0488 BH0787 BH0904 BH1121 BH1863 BH1927 BH2108
        BH3684
_______

[S] COG5579 Uncharacterized conserved protein
  Mtu:  Rv1873
  MtC:  MT1922
  Sme:  SMc01703
  Mlo:  mll0975
_______

[O] COG5580 Activator of HSP90 ATPase
  Sce:  YDR214w YNL281w
  Spo:  SPBC1711.08
  Ecu:  ECU07g1300
_______

[M] COG5581 Predicted glycosyltransferase
  Tma:  TM0905
  Cac:  CAC2144
  Bsu:  BS_ypfA
  Bha:  BH1633
  Eco:  ycgR
  EcZ:  ZycgR
  Ecs:  ECs1691
  Ype:  YPO3220
  Sty:  STM1798
  Pae:  PA3353
_______

[S] COG5582 Uncharacterized conserved protein
  Sau:  SA1295
  Lin:  lin2035
  Bsu:  BS_ypiB
  Bha:  BH1670 BH3876
_______

[S] COG5583 Uncharacterized small protein
  Cac:  CAC0932
  Bsu:  BS_yezD
  Bha:  BH1485 BH3126
  Pae:  PA0284
_______

[S] COG5584 Predicted small secreted protein
  Sau:  SA1567
  Lin:  lin1653
  Bsu:  BS_ytzB
  Bha:  BH3258
_______

[T] COG5585 NAD+--asparagine ADP-ribosyltransferase
  Mac:  MA3823
  Cac:  CAC0333 CAC0335 CAC0338 CAC1640 CAC1644 CAC1646 CAC1648
        CAC3522 CAC3702 CAC3704
  Spy:  SPy0428 SPy0975
  Bha:  BH3531
  Pae:  PA3841
_______

[S] COG5586 Uncharacterized conserved protein
  Mtu:  Rv2802c
  MtC:  MT2870
  Sme:  SMc03294
  Bme:  BMEI0557
  Mlo:  mlr1592
_______

[S] COG5587 Uncharacterized conserved protein
  Xfa:  XF2023
  Bme:  BMEI0590
  Mlo:  mll1538
_______

[S] COG5588 Uncharacterized conserved protein
  Rso:  RSp0712
  Sme:  SMa0407 SMc02860
  Mlo:  mll0508 mll4476 mll6465 mlr8146
_______

[S] COG5589 Uncharacterized conserved protein
  Vch:  VC2609
  Sme:  SMa2229
  Ccr:  CC3289
_______

[S] COG5590 Uncharacterized conserved protein
  Sce:  YLR201c
  Spo:  SPAC19G12.11
  Ccr:  CC3296
  Rpr:  RP616
  Rco:  RC0950
_______

[S] COG5591 Uncharacterized conserved protein
  Vch:  VCA0715
  Rso:  RSc2353
  Bme:  BMEI0390 BMEII1013
_______

[S] COG5592 Uncharacterized conserved protein
  Tac:  Ta0035
  Tvo:  TVN0039
  Sso:  SSO1764 SSO1911 SSO2049
  Nos:  alr3199
_______

[J] COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis
  Sce:  YDR060w
  Spo:  SPAC4F10.09c
  Ecu:  ECU02g0700
_______

[S] COG5594 Uncharacterized integral membrane protein
  Sce:  YLL005c YLR241w YMR266w YOL084w
  Spo:  SPAC24H6.13 SPAC2G11.09 SPBC354.08c
  Ecu:  ECU07g0450
_______

[R] COG5595 Zn-ribbon-containing, possibly nucleic-acid-binding protein
  Vch:  VC0904
  Hin:  HI1292 HI1341
  Pmu:  PM0477
  Rco:  RC0302
_______

[O] COG5596 Mitochondrial import inner membrane translocase, subunit TIM22
  Sce:  YDL217c YJL143w YNR017w
  Spo:  SPAC3A12.16c SPBC25H2.04c SPCC16A11.09c
  Ecu:  ECU07g0240
_______

[M] COG5597 Alpha-N-acetylglucosamine transferase
  Sce:  YOR320c
  Spo:  SPBC4C3.08 SPBC4C3.09
  Sme:  SMc04081
_______

[H] COG5598 Trimethylamine:corrinoid methyltransferase
  Mac:  MA0528 MA0932
  Sme:  SMa1478 SMb21178 SMc00886 SMc01661 SMc04330
  Mlo:  mll1230 mll1516 mll1654 mll5409 mlr1212 mlr8280
_______

[T] COG5599 Protein tyrosine phosphatase
  Sce:  YDL230w YOR208w
  Spo:  SPAC11E3.09 SPAC19D5.01 SPAC26F1.10c
  Ecu:  ECU04g0300
_______

[L] COG5600 Transcription-associated recombination protein
  Sce:  YJR084w YOL072w
  Spo:  SPAC1B3.08 SPBC1105.07c
  Ecu:  ECU01g0850
_______

[K] COG5601 General negative regulator of transcription subunit
  Sce:  YDL165w
  Spo:  SPCC4G3.15c
  Ecu:  ECU01g1040
_______

[B] COG5602 Histone deacetylase complex, SIN3 component
  Sce:  YOL004w
  Spo:  SPAC23C11.15 SPBC12C2.10c SPBC1734.16c
  Ecu:  ECU11g0190
_______

[N] COG5603 Subunit of TRAPP, an ER-Golgi tethering complex
  Sce:  YBR254c
  Spo:  SPBC11G11.04
  Ecu:  ECU03g0810
_______

[S] COG5604 Uncharacterized conserved protein
  Sce:  YOR206w
  Spo:  SPAC1142.04 SPAC1B3.09c
  Ecu:  ECU09g0520
_______

[S] COG5605 Predicted small integral membrane protein
  Rso:  RSp1568
  Sme:  SMc01986
  Mlo:  mlr1044
_______

[S] COG5606 Uncharacterized conserved small protein
  Nos:  all1033
  EcZ:  Z3231
  Ecs:  ECs2870
  Sty:  STM3907
  Xfa:  XF1572 XF1677 XFa0035
_______

[S] COG5607 Uncharacterized conserved protein
  Mac:  MA0084_3 MA2350_3
  Sso:  SSO1190
  Syn:  slr1444
  Nos:  all0567
  Pae:  PA2872
  Rso:  RSc3043
  Sme:  SMa1965
_______

[S] COG5608 Conserved secreted protein
  Afu:  AF0446 AF0447
  Pho:  PH0216 PH0806
  Pab:  PAB0133
  Pae:  PA1035
_______

[S] COG5609 Uncharacterized conserved protein
  Sau:  SA0170 SA0413
  Bsu:  BS_ybcI BS_yrhF
  Bha:  BH2529 BH3870
  Nos:  alr3238
_______

[R] COG5610 Predicted hydrolase (HAD superfamily)
  Sty:  STM0726
  jHp:  jhp0540
  Cje:  Cj1432c_2
_______

[R] COG5611 Predicted nucleic-acid-binding protein, contains PIN domain
  Aae:  aqq_06
  Sme:  SMc01177
  Rco:  RC0600
_______

[S] COG5612 Predicted integral membrane protein
  Atu:  AGl3455
  Mlo:  mll5454
  Ccr:  CC2749
_______

[S] COG5613 Uncharacterized conserved protein
  EcZ:  ZespD
  Ecs:  ECs4555
  Ype:  YPCD1.29c
  Sty:  STM1400
  Pae:  PA1708
_______

[R] COG5614 Bacteriophage head-tail adaptor
  Cac:  CAC1889
  EcZ:  Z1367 Z1808 Z1902 Z3326 Z6040
  Ecs:  ECs1546 ECs1593 ECs1797 ECs1977 ECs2246
  Rso:  RSc1686
  Atu:  AGc1752
_______

[S] COG5615 Predicted integral membrane protein
  Tac:  Ta0094
  Tvo:  TVN0159
  Ape:  APE0891
  Pae:  PA1044
_______

[S] COG5616 Predicted integral membrane protein
  Vch:  VC2207
  Sme:  SMa0570_2 SMa0601_1 SMa0664_1 SMa1583_2 SMb20300_2 SMb20539_2 SMb20702_2
        SMc01198_2 SMc03099_2 SMc03985_2 SMc04292_2
  Mlo:  mll1022_2 mll2000_2 mll3276_2 mll4049_2 mll4650_2 mll4655_2 mlr1023_2
        mlr2019_2
_______

[S] COG5617 Predicted integral membrane protein
  Mka:  MK0527 MK0597 MK1439
  Pab:  PAB1095
  Cac:  CAC2525 CAC2581_2 CAC2592_2
_______

[R] COG5618 Predicted periplasmic lipoprotein
  Ype:  YPO3317
  Sme:  SMb20350
  Bme:  BMEII0431
  Mlo:  mll7013
_______

[S] COG5619 Uncharacterized conserved protein
  Pae:  PA1371
  Xfa:  XF2664
  Atu:  AGc766
_______

[S] COG5620 Uncharacterized conserved protein
  Cac:  CAC1643 CAC1650
  Atu:  AGl2377
  Mlo:  mlr6569
_______

[R] COG5621 Predicted secreted hydrolase
  Dra:  DR1041
  Mtu:  Rv0988
  MtC:  MT1017
  Vch:  VC1628
  Atu:  AGpA195 AGpA667
_______

[N] COG5622 Protein required for attachment to host cells
  Atu:  AGpA216
  Sme:  SMb20879
  Mlo:  mll9589 mll9683 mlr3233
  Rpr:  RP470
  Rco:  RC0712
_______

[A] COG5623 Pre-mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1
  Sce:  YOR250c
  Spo:  SPAC22H10.05c
  Ecu:  ECU05g1130
_______

[K] COG5624 Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA)
  Sce:  YDR145w
  Spo:  SPAC15A10.02
  Ecu:  ECU10g0930
_______

[K] COG5625 Predicted transcription regulator containing HTH domain
  Afu:  AF2008
  Pho:  PH0046
  Pab:  PAB2311
  Pya:  PAE0567
  Ape:  APE1194
_______

[S] COG5626 Uncharacterized conserved small protein
  Syn:  ssr3000
  Nos:  asr0243
  Pae:  PA1075
_______

[L] COG5627 DNA repair protein MMS21
  Sce:  YEL019c
  Spo:  SPAC16A10.06c
  Ecu:  ECU09g1300
_______

[R] COG5628 Predicted acetyltransferase
  Bha:  BH1096
  Ccr:  CC0121
  Rco:  RC0743
_______

[S] COG5629 Predicted metal-binding protein
  Sce:  YJR141w
  Spo:  SPBC1734.10c
  Ecu:  ECU10g0490
_______

[E] COG5630 Acetylglutamate synthase
  Sce:  YJL071w
  Spo:  SPBC725.14
  Xfa:  XF1001_2
_______

[K] COG5631 Predicted transcription regulator, contains HTH domain (MarR family)
  Rso:  RSc1721
  Bme:  BMEII0603
  Mlo:  mlr3446
_______

[M] COG5632 N-acetylmuramoyl-L-alanine amidase
  Sau:  SA0905_2
  Lin:  lin0128 lin1700 lin2374 lin2563 lin2703
  Bsu:  BS_cwlA_1 BS_xlyA_1 BS_xlyB_1 BS_yomC BS_yqeE_1
_______

[R] COG5633 Predicted periplasmic lipoprotein
  Eco:  ycfL
  EcZ:  ZycfL
  Ecs:  ECs1482
  Ype:  YPO1612
  Sty:  STM1206
  Vch:  VC1895
  Hin:  HI0960
  Pmu:  PM0072
_______

[S] COG5634 Uncharacterized conserved protein
  Bsu:  BS_yukJ
  Nos:  alr3078
  Rso:  RSc1547
_______

[T] COG5635 Predicted NTPase (NACHT family)
  Mac:  MA1243 MA1839_1 MA3612
  Syn:  sll0068_1 sll0178
  Nos:  all0872 all2129_1 all3465_1 all3892_1 all4929 all9020 alr1232
        alr1903_1 alr2242 alr3466 alr3789 alr7126 alr9015_1 alr9018
  Mlo:  mll2286
_______

[S] COG5636 Uncharacterized conserved protein, contains Zn-ribbon-like motif
  Sce:  YKR071c
  Spo:  SPBC337.10c
  Ecu:  ECU02g0490
_______

[S] COG5637 Predicted integral membrane protein
  Dra:  DR2377 DRA0006
  Syn:  slr0941
  Nos:  all2381 alr0894
_______

[S] COG5638 Uncharacterized conserved protein
  Sce:  YDR365c
  Spo:  SPBC1734.01c
  Ecu:  ECU09g0390
_______

[S] COG5639 Uncharacterized conserved small protein
  Rso:  RSc2574
  Mlo:  msl9602 msr6406 msr6956
  Ccr:  CC2684
_______

[O] COG5640 Secreted trypsin-like serine protease
  Vch:  VC1200 VC1649 VCA0803
  Sme:  SMc03286
  Mlo:  mlr3307
_______

[K] COG5641 GATA Zn-finger-containing transcription factor
  Sce:  YER040w YFL021w YJL110c YKR034w YLR013w YMR136w
  Spo:  SPAC23E2.01 SPCC1393.08 SPCC1902.01
  Ecu:  ECU02g0260 ECU08g1400
_______

[S] COG5642 Uncharacterized conserved protein
  Ype:  YPO2345
  Sme:  SMa2281 SMb20696
  Mlo:  mlr9078
_______

[R] COG5643 Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E
  Mac:  MA0715
  Mth:  MTH1346 MTH55 MTH56 MTH674 MTH913
  Mka:  MK1177
_______

[S] COG5644 Uncharacterized conserved protein
  Sce:  YML093w
  Spo:  SPAC57A7.06
  Ecu:  ECU11g0910
_______

[R] COG5645 Predicted periplasmic lipoprotein
  Eco:  yceK yidQ
  EcZ:  ZyceK ZyidQ
  Ecs:  ECs1428 ECs4628
  Ype:  YPO4086
  Sty:  STM1152 STM3810
  Pae:  PA4018
  Hin:  HI0650
  Pmu:  PM1060
_______

[S] COG5646 Uncharacterized conserved protein
  Cgl:  Cgl2569
  Lla:  L17182
  Lin:  lin0405 lin0899
  Bsu:  BS_ydhG
  Bha:  BH2032
  Ccr:  CC3417
_______

[O] COG5647 Cullin, a subunit of E3 ubiquitin ligase
  Sce:  YDL132w YGR003w
  Spo:  SPAC17G6.12 SPAC24H6.03 SPAC3A11.08
  Ecu:  ECU07g0860
_______

[B] COG5648 Chromatin-associated proteins containing the HMG domain
  Sce:  YBR089c-a YDL002c YDR174w YKL032c YMR072w YPR052c
  Spo:  SPAC4G9.11c SPAC57A10.09c
  Ecu:  ECU06g1270
_______

[S] COG5649 Uncharacterized conserved protein
  Rso:  RSp1476
  Sme:  SMb21004 SMb21005
  Mlo:  mll2249 mll2250
_______

[S] COG5650 Predicted integral membrane protein
  Mka:  MK0830 MK1068
  Tac:  Ta0862 Ta0863
  Tvo:  TVN0963 TVN0964
  Cgl:  Cgl2929
  Mtu:  Rv0051
  MtC:  MT0057
  Mle:  ML2687
_______

[N] COG5651 PPE-repeat proteins
  Sce:  YIL115c
  Fnu:  FN1381
  Mtu:  Rv0096 Rv0256c Rv0280 Rv0286 Rv0304c Rv0305c Rv0355c
        Rv0388c Rv0442c Rv0453 Rv0755c Rv0878c Rv0915c Rv1039c
        Rv1135c Rv1168c Rv1196 Rv1361c Rv1387 Rv1548c Rv1705c
        Rv1706c Rv1753c Rv1787 Rv1789 Rv1790 Rv1800 Rv1801
        Rv1802 Rv1807 Rv1808 Rv1809 Rv1917c Rv1918c Rv2108
        Rv2123 Rv2352c Rv2353c Rv2356c Rv2430c Rv2608 Rv2768c
        Rv2770c Rv2892c Rv3018c Rv3022c Rv3125c Rv3135 Rv3136
        Rv3144c Rv3159c Rv3343c Rv3347c Rv3350c Rv3425 Rv3429
        Rv3478 Rv3532 Rv3533c Rv3539 Rv3558 Rv3621c Rv3739c
        Rv3873
  MtC:  MT0105 MT0269 MT0292 MT0299 MT0318 MT0370 MT0400
        MT0458 MT0469 MT0779 MT0901 MT0940 MT1068 MT1168
        MT1205 MT1234 MT1406 MT1431 MT1599 MT1745 MT1746
        MT1796 MT1836 MT1838 MT1839 MT1849 MT1850 MT1851
        MT1856 MT1856.1 MT1857 MT1968 MT1969 MT2167 MT2182.1
        MT2419 MT2422 MT2423 MT2425 MT2505 MT2683 MT2838
        MT2840 MT2959 MT3101 MT3106 MT3209 MT3221 MT3231
        MT3247 MT3248 MT3533 MT3582 MT3637 MT3643 MT3663
        MT3723 MT3987
  Mle:  ML0411 ML0539 ML1182 ML1828 ML1991
  Hpy:  HP0079 HP0289 HP0609 HP0610 HP0922
  jHp:  jhp0274 jhp0856
_______

[S] COG5652 Predicted integral membrane protein
  Hbs:  VNG0080H
  Mac:  MA1070
  Tma:  TM1023
  Dra:  DR2023
  Cac:  CAC3074
  Lin:  lin0112
  Bha:  BH3707
  Rso:  RSc0317
_______

[M] COG5653 Protein involved in cellulose biosynthesis (CelD)
  Atu:  AGc2285
  Sme:  SMc01796
  Mlo:  mll2080 mll2082 mll8447 mlr0003
  Ccr:  CC1244 CC2278 CC3689
_______

[S] COG5654 Uncharacterized conserved protein
  Mtu:  Rv1989c
  MtC:  MT2043
  Ype:  YPO2346
  Sme:  SMa1455 SMa2279 SMb20695 SMb21128
  Mlo:  mll9650 mlr9079
_______

[L] COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives
  Cac:  CAC1872
  Sau:  SA0027 SA0028 SAP002
  Lin:  pli0015
  Bha:  BH3964
_______

[O] COG5656 Importin, protein involved in nuclear import
  Sce:  YDR395w YJR132w
  Spo:  SPCC550.11
  Ecu:  ECU10g0620
_______

[D] COG5657 CAS/CSE protein involved in chromosome segregation
  Sce:  YGL238w YPL125w
  Spo:  SPAC22H10.03c SPBC30B4.05 SPCC1322.06
  Ecu:  ECU02g0630
_______

[S] COG5658 Predicted integral membrane protein
  Afu:  AF2202
  Mac:  MA3135
  Cgl:  Cgl2970
  Lin:  lin2529 lin2715
  Bsu:  BS_ybgB BS_yfhL BS_yvaZ
  Ccr:  CC3027
_______

[L] COG5659 FOG: Transposase
  Syn:  sll0092 sll0667 sll1982 slr0099 slr0460 slr1522 slr1683
  Rso:  RSp0126 RSp0156 RSp0475 RSp1135 RSp1301 RSp1331 RSp1362
  jHp:  jhp0718
  Mlo:  mll6033 mll6075 mll6355 mlr5980
_______

[S] COG5660 Predicted integral membrane protein
  Cgl:  Cgl0863
  Mtu:  Rv0093c
  MtC:  MT0102
  Mle:  ML1988
  Bsu:  BS_ylaD
  Tpa:  TP0956
_______

[O] COG5661 Predicted secreted Zn-dependent protease
  Syn:  sll1761
  Atu:  AGc2496
  Sme:  SMc00194
  Bme:  BMEI0957
  Mlo:  mlr0789
_______

[K] COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor)
  Mtu:  Rv0736
  MtC:  MT0760
  Bsu:  BS_ybbM
  Bha:  BH0264 BH3217
  Syn:  slr1546
  Nos:  alr3281
  Rso:  RSc2982 RSp1650
  Atu:  AGc2736 AGc3680
  Sme:  SMa0144 SMc01420 SMc01421 SMc02714 SMc04050
  Mlo:  mlr0408 mlr3808 mlr7774
  Tpa:  TP0093
_______

[S] COG5663 Uncharacterized conserved protein
  Cac:  CAC3379
  Bsu:  BS_yqfW
  Bha:  BH1399
  Mlo:  mll5269_2
_______

[O] COG5664 Predicted secreted Zn-dependent protease
  Atu:  AGc3641
  Sme:  SMb21492
  Bme:  BMEII0082
  Mlo:  mlr1823 mlr7711
_______

[K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit
  Sce:  YPR072w
  Spo:  SPAC1B3.05
  Ecu:  ECU06g1510
_______

