

set -ex



cstacks 2>&1 | grep -Fq 'cstacks 2.65'
gstacks 2>&1 | grep -Fq 'gstacks 2.65'
sstacks 2>&1 | grep -Fq 'sstacks 2.65'
ustacks 2>&1 | grep -Fq 'ustacks 2.65'
phasedstacks 2>&1 | grep -Fq 'phasedstacks 2.65'
populations 2>&1 | grep -Fq 'populations 2.65'
process_radtags 2>&1 | grep -Fq 'process_radtags 2.65'
process_shortreads 2>&1 | grep -Fq 'process_shortreads 2.65'
clone_filter 2>&1 | grep -Fq 'clone_filter 2.65'
kmer_filter 2>&1 | grep -Fq 'kmer_filter 2.65'
stacks-dist-extract 2>&1 | grep -q Usage
tsv2bam 2>&1 | grep -Fq 'tsv2bam 2.65'
convert_stacks.pl 2>&1 | grep -Fq 'convert_stacks.pl _VERSION_'
denovo_map.pl -h 2>&1 | grep -Fq 'denovo_map.pl 2.65'
extract_interpop_chars.pl -h 2>&1 | grep -Fq 'extract-interpop-chars.pl'
stacks-integrate-alignments 2>&1 | grep -Fq usage
ref_map.pl 2>&1 | grep -Fq 'ref_map.pl 2.65'
stacks-count-reads-per-sample-per-locus 2>&1 | grep -Fq usage
stacks-hist2d-loci-samples-coverage 2>&1 | grep -Fq usage
stacks-samtools-tview 2>&1 | grep -Fq usage
exit 0
