# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /opt/recipe, last modified Wed Nov 20 12:46:06 2019
# ------------------------------------------------

package:
    name: spaln
    version: 2.4.01
source:
    patches:
        - patch-makefile_ldflags
        - patch-makefile_pl
    sha256: e61838ea9896c0dd26bb5e513fcc5b5e52301dd92bdcdfa7aed690d34165d9cf
    url: https://github.com/ogotoh/spaln/archive/Ver.2.4.01.tar.gz
build:
    number: '0'
    string: pl526he513fc3_0
requirements:
    build:
        - _libgcc_mutex 0.1 main
        - binutils_impl_linux-64 2.31.1 h7fc9f1b_2
        - binutils_linux-64 2.31.1 h6176602_14
        - gcc_impl_linux-64 7.3.0 habb00fd_2
        - gcc_linux-64 7.3.0 h553295d_14
        - gxx_impl_linux-64 7.3.0 hdf63c60_2
        - gxx_linux-64 7.3.0 h553295d_14
        - libgcc-ng 9.1.0 hdf63c60_0
        - libstdcxx-ng 9.1.0 hdf63c60_0
    host:
        - _libgcc_mutex 0.1 main
        - libgcc-ng 9.1.0 hdf63c60_0
        - libstdcxx-ng 9.1.0 hdf63c60_0
        - perl 5.26.2 h516909a_1006
        - zlib 1.2.11 h516909a_1006
    run:
        - libgcc-ng >=7.3.0
        - libstdcxx-ng >=7.3.0
        - perl >=5.26.2,<5.26.3.0a0
        - zlib >=1.2.11,<1.3.0a0
        - zlib >=1.2.11,<1.3.0a0
test:
    commands:
        - spaln -h 2>&1 |grep 'SPALN version' >/dev/null
        - makblk.pl 2>&1 |grep makblk.pl >/dev/null
        - sortgrcd -h 2>&1 |grep sortgrcd >/dev/null
        - makmdm -h 2>&1 |grep makmdm >/dev/null
        - makdbs -h 2>&1 |grep makdbs >/dev/null
        - makeidx.pl -h 2>&1 |grep makeidx.pl >/dev/null
about:
    description: 'Spaln (space-efficient spliced alignment) is a stand-alone program
        that maps

        and aligns a set of cDNA or protein sequences onto a whole genomic sequence

        in a single job. Spaln also performs spliced or ordinary alignment after

        rapid similarity search against a protein sequence database, if a genomic
        segment

        or an amino acid sequence is given as a query.

        '
    dev_url: https://github.com/ogotoh/spaln
    home: http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/spaln/
    license: GPL-2.0
    license_family: GPL
    license_file: COPYING
    summary: Map and align a set of cDNA/EST or protein sequences onto a genome
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - doi:10.1093/nar/gks708
