# This file created by conda-build 24.5.1
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Jun  6 20:18:21 2024
# ------------------------------------------------

package:
  name: sonicparanoid
  version: 1.3.8
source:
  sha256: d573bb761e619adc14e51736f73d3142049cb1e00f5d61f10e081566edaefaec
  url: https://gitlab.com/salvo981/sonicparanoid2/-/archive/v1.3.8/sonicparanoid2-v1.3.8.tar.gz
build:
  number: '4'
  script: '/opt/conda/conda-bld/sonicparanoid_1717713563502/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold/bin/python
    -m pip install . --no-deps --no-cache-dir -vvv '
  string: py38hfe239e1_4
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.40 ha1999f0_2
    - binutils_linux-64 2.40 hdade7a5_3
    - gcc_impl_linux-64 12.3.0 h58ffeeb_7
    - gcc_linux-64 12.3.0 h6477408_3
    - gxx_impl_linux-64 12.3.0 h2a574ab_7
    - gxx_linux-64 12.3.0 h4a1b8e8_3
    - kernel-headers_linux-64 2.6.32 he073ed8_17
    - ld_impl_linux-64 2.40 hf3520f5_2
    - libgcc-devel_linux-64 12.3.0 h0223996_107
    - libgcc-ng 13.2.0 h77fa898_7
    - libgomp 13.2.0 h77fa898_7
    - libsanitizer 12.3.0 hb8811af_7
    - libstdcxx-devel_linux-64 12.3.0 h0223996_107
    - libstdcxx-ng 13.2.0 hc0a3c3a_7
    - sysroot_linux-64 2.12 he073ed8_17
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 hd590300_5
    - ca-certificates 2024.6.2 hbcca054_0
    - cython 3.0.10 py38h17151c0_0
    - ld_impl_linux-64 2.40 hf3520f5_2
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 13.2.0 h77fa898_7
    - libgomp 13.2.0 h77fa898_7
    - libnsl 2.0.1 hd590300_0
    - libsqlite 3.45.3 h2797004_0
    - libstdcxx-ng 13.2.0 hc0a3c3a_7
    - libuuid 2.38.1 h0b41bf4_0
    - libxcrypt 4.4.36 hd590300_1
    - libzlib 1.3.1 h4ab18f5_1
    - ncurses 6.5 h59595ed_0
    - openssl 3.3.1 h4ab18f5_0
    - pip 24.0 pyhd8ed1ab_0
    - python 3.8.19 hd12c33a_0_cpython
    - python_abi 3.8 4_cp38
    - readline 8.2 h8228510_1
    - setuptools 70.0.0 pyhd8ed1ab_0
    - tk 8.6.13 noxft_h4845f30_101
    - wheel 0.43.0 pyhd8ed1ab_1
    - xz 5.2.6 h166bdaf_0
  run:
    - biopython >=1.79
    - blast >=2.12.0
    - diamond >=2.0.12
    - filetype >=1.0.7
    - libgcc-ng >=12
    - libstdcxx-ng >=12
    - mcl >=14.137
    - mmseqs2 >=13.45111
    - numpy >=1.21
    - pandas >=1.3.2
    - psutil >=5.8.0
    - python >=3.8,<3.9.0a0
    - python_abi 3.8.* *_cp38
    - scikit-learn >=0.24.2
    - scipy >=1.7.1
test:
  commands:
    - sonicparanoid --help
about:
  home: http://iwasakilab.bs.s.u-tokyo.ac.jp/sonicparanoid/
  license: GNU General Public License v3
  license_family: GPL3
  license_file: LICENSE.md
  summary: 'SonicParanoid: fast, easy and accurate orthology inference'
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - doi:10.1093/bioinformatics/bty631
