LICENSE
MANIFEST.in
README.md
README.rst
setup.cfg
setup.py
bin/shmlast
shmlast/VERSION
shmlast/__init__.py
shmlast/app.py
shmlast/crbl.py
shmlast/hits.py
shmlast/last.py
shmlast/profile.py
shmlast/translate.py
shmlast/util.py
shmlast.egg-info/PKG-INFO
shmlast.egg-info/SOURCES.txt
shmlast.egg-info/dependency_links.txt
shmlast.egg-info/not-zip-safe
shmlast.egg-info/requires.txt
shmlast.egg-info/top_level.txt
shmlast/tests/__init__.py
shmlast/tests/test_besthits.py
shmlast/tests/test_last.py
shmlast/tests/test_script.py
shmlast/tests/utils.py
shmlast/tests/data/besthits.expected.csv
shmlast/tests/data/db.maf.csv
shmlast/tests/data/pom.50.fa
shmlast/tests/data/query.maf.csv
shmlast/tests/data/reciprocals.expected.csv
shmlast/tests/data/sacPom.cdna.fa
shmlast/tests/data/sacPom.pep.fa
shmlast/tests/data/test-protein.fa
shmlast/tests/data/test-transcript.fa