README.md
home.path
run_abundance.py
run_sepp.py
run_tipp.py
run_tipp_tool.py
run_upp.py
setup.py
split_sequences.py
sepp/__init__.py
sepp/algorithm.py
sepp/alignment.py
sepp/checkpointing.py
sepp/config.py
sepp/decompose_tree.py
sepp/ensemble.py
sepp/exhaustive.py
sepp/exhaustive_tipp.py
sepp/exhaustive_upp.py
sepp/filemgr.py
sepp/jobs.py
sepp/math_utils.py
sepp/metagenomics.py
sepp/problem.py
sepp/scheduler.py
sepp/scratch.py
sepp/tree.py
sepp.egg-info/PKG-INFO
sepp.egg-info/SOURCES.txt
sepp.egg-info/dependency_links.txt
sepp.egg-info/top_level.txt