# This file created by conda-build 3.10.9
# meta.yaml template originally from:
# /opt/recipe, last modified Fri Jul 27 09:25:20 2018
# ------------------------------------------------

package:
    name: riboseed
    version: 0.4.67
source:
    sha256: ddb3b4ca45b77c320a48f9ee012ebc47a1a5fefc34bdbf468f605d57a8b45bd8
    url: https://pypi.io/packages/source/r/riboSeed/riboSeed-0.4.67.tar.gz
build:
    entry_points:
        - ribo = riboSeed.ribo:main
    number: '2'
    string: py35_2
requirements:
    host:
        - bcftools 1.9 h4da6232_0
        - biopython 1.68 py35_0
        - bzip2 1.0.6 h470a237_2
        - ca-certificates 2018.4.16 0
        - certifi 2018.4.16 py35_0
        - coverage 4.4.1 py35_0
        - curl 7.61.0 h93b3f91_1
        - cycler 0.10.0 py_1
        - dbus 1.13.0 h3a4f0e9_0
        - decorator 4.3.0 py_0
        - expat 2.2.5 hfc679d8_1
        - fontconfig 2.13.0 h074f895_3
        - freetype 2.8.1 0
        - glib 2.53.6 h5d9569c_2
        - gst-plugins-base 1.12.4 h33fb286_0
        - gstreamer 1.12.4 hb53b477_0
        - htslib 1.9 h4da6232_1
        - icu 58.2 hfc679d8_0
        - intel-openmp 2018.0.3 0
        - jenkspy 0.1.4 py35h470a237_0
        - jpeg 9c h470a237_0
        - krb5 1.14.6 0
        - libdeflate 1.0 h470a237_0
        - libffi 3.2.1 3
        - libgcc 7.2.0 h69d50b8_2
        - libgcc-ng 7.2.0 hdf63c60_3
        - libgfortran-ng 7.2.0 hdf63c60_3
        - libiconv 1.15 h470a237_1
        - libpng 1.6.34 ha92aebf_1
        - libssh2 1.8.0 h5b517e9_2
        - libstdcxx-ng 7.2.0 hdf63c60_3
        - libtiff 4.0.9 he6b73bb_1
        - libuuid 1.0.3 1
        - libxcb 1.13 h470a237_2
        - libxml2 2.9.8 h422b904_2
        - matplotlib 1.5.3 py35_9
        - mkl 2018.0.3 1
        - mmtf-python 1.0.2 py35_0
        - msgpack-python 0.5.6 py35h2d50403_2
        - ncurses 6.1 hfc679d8_1
        - networkx 2.1 py_1
        - nose 1.3.7 py35_2
        - numpy 1.12.1 py35hca0bb5e_1
        - olefile 0.45.1 py_1
        - openssl 1.0.2o 0
        - pandas 0.20.1 np112py35_0
        - pcre 8.41 h470a237_2
        - pillow 5.2.0 py35_0
        - pip 18.0 py35_0
        - pthread-stubs 0.4 h470a237_1
        - pyaml 17.8.0 py35_0
        - pyparsing 2.2.0 py_1
        - pyqt 5.6.0 py35h8210e8a_6
        - pysam 0.11.2.2 py35_1
        - python 3.5.5 h5001a0f_2
        - python-dateutil 2.7.3 py_0
        - pytz 2018.5 py_0
        - pyyaml 3.12 py35_1
        - qt 5.6.2 hd25b39d_14
        - readline 7.0 haf1bffa_1
        - reportlab 3.4.0 py35hdd9f355_1
        - samtools 1.7 1
        - setuptools 40.0.0 py35_0
        - sip 4.18 py35_1
        - six 1.11.0 py35_1
        - sqlite 3.24.0 h2f33b56_0
        - tk 8.6.8 0
        - tornado 5.1 py35_0
        - wheel 0.31.1 py35_0
        - xorg-libxau 1.0.8 h470a237_6
        - xorg-libxdmcp 1.1.2 h470a237_7
        - xz 5.2.4 h470a237_0
        - yaml 0.1.7 0
        - zlib 1.2.11 h470a237_3
    run:
        - barrnap ==0.7
        - bcftools ==1.5
        - biopython ==1.68
        - bwa ==0.7.8
        - coverage ==4.4.1
        - emboss
        - jenkspy ==0.1.4
        - mafft
        - matplotlib ==1.5.3
        - networkx ==2.1
        - nose ==1.3.7
        - pandas ==0.20.1
        - prank
        - pyaml ==17.8.0
        - pysam ==0.11.2.2
        - python >=3.5,<3.6.0a0
        - samtools ==1.4.1
        - spades ==3.9.0
test:
    commands:
        - ribo
        - ribo scan -h
        - ribo select -h
        - ribo stack -h
    imports:
        - riboSeed
about:
    description: Genome assembly polisher to bridge rDNA gaps
    dev_url: https://github.com/nickp60/riboSeed
    home: https://github.com/nickp60/riboSeed
    license: MIT License
    license_family: MIT
    license_file: LICENSE
    summary: 'riboSeed: assemble across rDNA regions'
extra:
    copy_test_source_files: true
    final: true
    recipe-maintainers:
        - nickp60
