bin/plotDataStats.py
bin/reseq
bin/reseq-prepare-names.py
etc/reseq/adapters/Nextera_XTv2.fa
etc/reseq/adapters/Nextera_XTv2.mat
etc/reseq/adapters/TruSeq_single.fa
etc/reseq/adapters/TruSeq_single.mat
etc/reseq/test/drosophila-GCF_000001215.4_cut.fna
etc/reseq/test/drosophila-coverageTest-R1.fq
etc/reseq/test/drosophila-coverageTest-R2.fq
etc/reseq/test/drosophila-coverageTest.bam
etc/reseq/test/drosophila-crossDuplicates-R1.fq
etc/reseq/test/drosophila-crossDuplicates-R2.fq
etc/reseq/test/drosophila-crossDuplicates.bam
etc/reseq/test/drosophila-methylation.bed
etc/reseq/test/ecoli-GCF_000005845.2_ASM584v2_genomic.fa
etc/reseq/test/ecoli-S1L001-adapters-R1.fq
etc/reseq/test/ecoli-S1L001-adapters-R2.fq
etc/reseq/test/ecoli-S1L001-adapters.bam
etc/reseq/test/ecoli-SRR490124-4pairs-R1.fq
etc/reseq/test/ecoli-SRR490124-4pairs-R2.fq
etc/reseq/test/ecoli-SRR490124-4pairs-bwa.bam
etc/reseq/test/ecoli-SRR490124-4pairs.bam
etc/reseq/test/ecoli-SRR490124-4pairs.sam
etc/reseq/test/ecoli-SRR490124-4pairs.vcf
etc/reseq/test/ecoli-SRR490124-adapter-R1.fq
etc/reseq/test/ecoli-SRR490124-adapter-R2.fq
etc/reseq/test/ecoli-SRR490124-adapter-bwa.bam
etc/reseq/test/ecoli-SRR490124-adapter.bam
etc/reseq/test/ecoli-duplicates-R1.fq
etc/reseq/test/ecoli-duplicates-R2.fq
etc/reseq/test/ecoli-duplicates.bam
etc/reseq/test/ecoli-tiles-R1.fq
etc/reseq/test/ecoli-tiles-R2.fq
etc/reseq/test/ecoli-tiles.bam
etc/reseq/test/ref-bias-test.txt
etc/reseq/test/reference-bias-calculation.fa
etc/reseq/test/reference-special-chars.fa
etc/reseq/test/reference-test-withN.fa
etc/reseq/test/reference-test.fa
etc/reseq/test/reference-test.fa.bz2
etc/reseq/test/reference-test.fa.gz
etc/reseq/test/test-var.vcf
include/nlopt.f
include/nlopt.h
include/nlopt.hpp
lib/DataStats.py
lib/_DataStats.so
lib/__pycache__/DataStats.cpython-312.pyc
lib/cmake/nlopt/NLoptConfig.cmake
lib/cmake/nlopt/NLoptConfigVersion.cmake
lib/cmake/nlopt/NLoptLibraryDepends-relwithdebinfo.cmake
lib/cmake/nlopt/NLoptLibraryDepends.cmake
lib/libnlopt.so
lib/libnlopt.so.0
lib/libnlopt.so.0.10.0
lib/pkgconfig/nlopt.pc
share/man/man3/nlopt.3
share/man/man3/nlopt_minimize.3
share/man/man3/nlopt_minimize_constrained.3
