{% set version = '2.3.1' %}

package:
  name: r-seurat
  version: {{ version }}

source:
  fn: Seurat_{{ version }}.tar.gz
  url:
    - https://cran.r-project.org/src/contrib/Seurat_{{ version }}.tar.gz
    - https://cran.r-project.org/src/contrib/Archive/Seurat/Seurat_{{ version }}.tar.gz
  sha256: dacbf52dc0d7834f82c42d7e17a89c5d2e2800f607afd2b7c351e4dc5e4e2542

build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/

requirements:
  build:
    - r-ape
    - r-base
    - r-caret
    - r-cluster
    - r-cowplot
    - r-diffusionmap
    - r-dosnow
    - r-dplyr
    - r-dtw
    - r-fpc
    - r-fitdistrplus
    - r-fnn
    - r-foreach
    - r-gdata
    - r-ggplot2
    - r-ggridges
    - r-gplots
    - r-hmisc
    - r-ica
    - r-igraph
    - r-irlba
    - r-lars
    - r-lmtest
    - r-mass
    - r-matrix >=1.2.14
    - r-metap
    - r-mixtools
    - r-pbapply
    - r-plotly
    - r-png
    - r-ranger
    - r-rann
    - r-rcolorbrewer
    - r-rcpp
    - r-rcppeigen
    - r-rcppprogress
    - r-reshape2
    - r-reticulate
    - r-rocr
    - r-rtsne
    - r-sdmtools
    - r-stringr
    - r-tclust
    - r-tidyr
    - r-tsne
    - r-vgam
    - gcc

  run:
    - r-ape
    - r-base
    - r-caret
    - r-cluster
    - r-cowplot
    - r-diffusionmap
    - r-dosnow
    - r-dplyr
    - r-dtw
    - r-fpc
    - r-fitdistrplus
    - r-fnn
    - r-foreach
    - r-gdata
    - r-ggplot2
    - r-ggridges
    - r-gplots
    - r-hmisc
    - r-ica
    - r-igraph
    - r-irlba
    - r-lars
    - r-lmtest
    - r-mass
    - r-matrix >=1.2.14
    - r-metap
    - r-mixtools
    - r-pbapply
    - r-plotly
    - r-png
    - r-ranger
    - r-rann
    - r-rcolorbrewer
    - r-rcpp
    - r-rcppeigen
    - r-rcppprogress
    - r-reshape2
    - r-reticulate
    - r-rocr
    - r-rtsne
    - r-sdmtools
    - r-stringr
    - r-tclust
    - r-tidyr
    - r-tsne
    - r-vgam
    - libgcc
    - openjdk >=6

test:
  commands:
    - $R -e "library('Seurat')"

about:
  home: http://www.satijalab.org/seurat
  dev_url: https://github.com/satijalab/seurat
  license: GPL-3
  summary: A toolkit for quality control, analysis, and exploration of single cell RNA sequencing
    data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity
    from single cell transcriptomic measurements, and to integrate diverse types of
    single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
    Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, and
    Butler A and Satija R (2017) <doi:10.1101/164889> for more details.
  license_family: GPL

