{% set version = '1.4.0.16' %}

package:
  name: r-seurat
  version: {{ version }}

source:
  url: https://github.com/satijalab/seurat/archive/3bd092a45d02be4f5551b3312d21eb23096aac1e.zip
  sha256: 17c14dac8831d64039d4e2d71ecc4ef6d1307b97b9f81b09d25bdca47e94a399

build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/

requirements:
  build:
    - r-base
    - r-rocr
    - r-stringr
    - r-mixtools
    - r-lars
    - r-fastica
    - r-tsne
    - r-rtsne
    - r-fpc
    - r-ape
    - r-vgam
    - r-pbapply
    - r-igraph
    - r-fnn
    - r-caret
    - r-plyr
    - r-dplyr
    - r-rcolorbrewer
    - r-mass
    - r-matrix
    - r-irlba
    - r-reshape2
    - r-gridextra
    - r-gplots
    - r-gdata
    - r-rcpp
    - r-rcppeigen
    - r-rcppprogress
    - r-tclust
    - r-ranger
    - r-ggplot2
    - r-cowplot
    - gcc

  run:
    - r-base
    - r-rocr
    - r-stringr
    - r-mixtools
    - r-lars
    - r-fastica
    - r-tsne
    - r-rtsne
    - r-fpc
    - r-ape
    - r-vgam
    - r-pbapply
    - r-igraph
    - r-fnn
    - r-caret
    - r-plyr
    - r-dplyr
    - r-rcolorbrewer
    - r-mass
    - r-matrix
    - r-irlba
    - r-reshape2
    - r-gridextra
    - r-gplots
    - r-gdata
    - r-rcpp
    - r-rcppeigen
    - r-rcppprogress
    - r-tclust
    - r-ranger
    - r-ggplot2
    - r-cowplot
    - libgcc
    - openjdk >=6

test:
  commands:
    - $R -e "library('Seurat')"

about:
  home: http://www.satijalab.org/seurat
  dev_url: https://github.com/satijalab/seurat
  license: GPL-3
  summary: A toolkit for quality control, analysis, and exploration of single cell RNA sequencing
    data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity
    from single cell transcriptomic measurements, and to integrate diverse types of
    single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
    Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, and
    Butler A and Satija R (2017) <doi:10.1101/164889> for more details.
  license_family: GPL

