# Mining Metaomics Data (MetaOMineR)

## Documentation for package ‘momr’ version 1.1

- DESCRIPTION file.

## Help Pages

momr-package | Mining Metaomics Data In R
abondanceScore | abondanceScore
aggregateProfiles | aggregateProfiles
buildMgsFinal | buildMgsFinal @date December 20th 2013
computeFilteredVectors | computeFilteredVectors
computeSignalMetrics | computeSignalMetrics
computeUpsizedGC | computeUpsizedGC
connectivity | connectivity
countSampledGenes | countSampledGenes
countSampledGenesGC | countSampledGenesGC
deleteData | deleteData
downsizedRichnessL2T | downsizedRichnessL2T
downsizeGC | downsizeGC
downsizeGC.all | downsizeGC.all
downsizeMatrix | downsizeMatrix
extractProfiles | extractProfiles
extractSignificant | extractSignificant
filt.hierClust | filt.hierClust
filterListGenebags | filterListGenebags
filterMat | filterMat
hierClust | hierClust
hs_3.3_metahit_genesize | hs_3.3_metahit_genesize
hs_3.3_metahit_sample_dat_freq | hs_3.3_metahit_sample_dat_freq
hs_3.3_metahit_sample_dat_raw | hs_3.3_metahit_sample_dat_raw
indexReads | indexReads
indexReadsGC | indexReadsGC
launchTask | launchTask
lmp | lmp
mapResults | mapResults
mgs_hs_3.3_metahit_sup500 | mgs_hs_3.3_metahit_sup500
momr | Mining Metaomics Data In R
normFreqRPKM | normFreqRPKM
normFreqTC | normFreqTC
phenoPairwiseRelations | phenoPairwiseRelations
plotBarcode | plotBarcode
plotBarcode2 | plotBarcode2
plotBarcodeBW | plotBarcodeBW
plotCors | plotCors
plotCors2 | plotCors2
plotMGSQuality | plotMGSQuality
plotPvals | plotPvals
presenceScore | presenceScore
profiles2Genebags | profiles2Genebags
projectOntoMGS | projectOntoMGS
sampleRandomly | sampleRandomly
selectListSize | selectListSize
splitData | splitData
testRelations | testRelations
watchProgress | watchProgress