Package: LDWeaver
Type: Package
Title: Genomewide Epistasis Analysis on Bacteria
Version: 1.3.1
Authors@R: person("Sudaraka", "Mallawaarachchi", email = "smallawaarachchi@gmail.com", role = c("aut", "cre"))
Maintainer: Sudaraka Mallawaarachchi <smallawaarachchi@gmail.com>
Description: Perform genomewide epistasis analysis by evaluating the LD structure in bacteria.
License: GPL (>=3) + file LICENSE
Encoding: UTF-8
LazyData: true
biocViews: Software
Depends: R (>= 4.0.0),
Imports: ape, chromoMap, data.table, dplyr, fitdistrplus, genbankr,
        GenomicRanges, ggnewscale, ggplot2, ggtree, ggraph, grDevices,
        heatmap3, htmlwidgets, igraph, Matrix, MatrixExtra, methods,
        parallel, phytools, plyr, RColorBrewer, Rcpp, RcppArmadillo,
        stats, utils
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.2.3
URL: https://github.com/Sudaraka88/LDWeaver
BugReports: https://github.com/Sudaraka88/LDWeaver/issues
Biarch: TRUE
Author: Sudaraka Mallawaarachchi [aut, cre]
Built: R 4.3.2; x86_64-conda-linux-gnu; 2023-11-02 11:44:21 UTC; unix
