Package: basejump
Title: Base Functions for Bioinformatics
Description: Helper functions for bioinformatics, package development, and
    R Markdown reports.
Version: 0.7.2
Date: 2018-08-23
Authors@R: c(
    person(
        "Michael", "Steinbaugh",
        email = "mike@steinbaugh.com",
        role = c("aut", "cre"),
        comment = c(ORCID = "0000-0002-2403-2221")
    ),
    person(
        "Rory", "Kirchner",
        email = "roryk@alum.mit.edu",
        role = "ctb",
        comment = c(ORCID = "0000-0003-4814-5885")
    ),
    person(
        given = "Mary",
        family = "Piper",
        email = "mary.piper@gmail.com",
        role = "ctb",
        comment = c(ORCID = "0000-0003-2699-3840")
    ))
URL: https://steinbaugh.com/basejump,
        https://github.com/steinbaugh/basejump
BugReports: https://github.com/steinbaugh/basejump/issues
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: TRUE
Depends: R (>= 3.4), SummarizedExperiment
Imports: AnnotationHub, assertive.base, assertive.code, assertive.data,
        assertive.files, assertive.numbers, assertive.properties,
        assertive.sets, assertive.strings, assertive.types, Biobase,
        BiocGenerics, cowplot (>= 0.9), curl, dendsort (>= 0.3), dplyr
        (>= 0.7), ensembldb, GenomicFeatures, GenomeInfoDb,
        GenomicRanges, ggplot2 (>= 3.0), grDevices, IRanges, jsonlite
        (>= 1.5), knitr (>= 1.20), magrittr (>= 1.5), Matrix (>= 1.2),
        Matrix.utils (>= 0.9), methods, pbapply (>= 1.3), pheatmap,
        R.utils, RColorBrewer, RCurl (>= 1.95), readr (>= 1.1), rio (>=
        0.5), rlang (>= 0.2), rtracklayer, S4Vectors, sessioninfo,
        stats, stringr (>= 1.3), tibble (>= 1.4), tidyr (>= 0.8),
        utils, viridis, yaml (>= 2.1)
Suggests: BiocStyle, EnsDb.Hsapiens.v75, rmarkdown, testthat (>= 2.0)
biocViews: DataImport, Infrastructure
Roxygen: list(markdown = TRUE)
RoxygenNote: 6.1.0
VignetteBuilder: knitr
Author: Michael Steinbaugh [aut, cre] (<https://orcid.org/0000-0002-2403-2221>),
  Rory Kirchner [ctb] (<https://orcid.org/0000-0003-4814-5885>),
  Mary Piper [ctb] (<https://orcid.org/0000-0003-2699-3840>)
Maintainer: Michael Steinbaugh <mike@steinbaugh.com>
Built: R 3.5.1; ; 2019-01-29 16:26:21 UTC; unix
