# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Wed May 31 15:16:18 2023
# ------------------------------------------------

package:
  name: plastid
  version: 0.6.1
source:
  sha256: 7a63f8a3b760e9c91e7c6d95ff781d9a8f2f967d705fcd8555ebb1e6d3b08b7b
  url: https://files.pythonhosted.org/packages/source/p/plastid/plastid-0.6.1.tar.gz
build:
  number: '2'
  string: py38h7d1810a_2
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.39 he00db2b_1
    - binutils_linux-64 2.39 h5fc0e48_13
    - gcc_impl_linux-64 12.2.0 hcc96c02_19
    - gcc_linux-64 12.2.0 h4798a0e_13
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.39 hcc3a1bd_1
    - libgcc-devel_linux-64 12.2.0 h3b97bd3_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libsanitizer 12.2.0 h46fd767_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - biopython 1.77 py38h1e0a361_1
    - brotli 1.0.9 h166bdaf_8
    - brotli-bin 1.0.9 h166bdaf_8
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.19.1 hd590300_0
    - ca-certificates 2023.5.7 hbcca054_0
    - certifi 2023.5.7 pyhd8ed1ab_0
    - charset-normalizer 3.1.0 pyhd8ed1ab_0
    - contourpy 1.0.7 py38hfbd4bf9_0
    - cycler 0.11.0 pyhd8ed1ab_0
    - cython 0.29.35 py38h17151c0_0
    - fonttools 4.39.4 py38h01eb140_0
    - freetype 2.12.1 hca18f0e_1
    - htslib 1.17 h81da01d_2
    - idna 3.4 pyhd8ed1ab_0
    - importlib-resources 5.12.0 pyhd8ed1ab_0
    - importlib_resources 5.12.0 pyhd8ed1ab_0
    - keyutils 1.6.1 h166bdaf_0
    - kiwisolver 1.4.4 py38h43d8883_1
    - krb5 1.20.1 h81ceb04_0
    - lcms2 2.15 haa2dc70_1
    - ld_impl_linux-64 2.40 h41732ed_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 16_linux64_openblas
    - libbrotlicommon 1.0.9 h166bdaf_8
    - libbrotlidec 1.0.9 h166bdaf_8
    - libbrotlienc 1.0.9 h166bdaf_8
    - libcblas 3.9.0 16_linux64_openblas
    - libcurl 8.1.2 h409715c_0
    - libdeflate 1.18 h0b41bf4_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 12.2.0 h65d4601_19
    - libgfortran-ng 12.2.0 h69a702a_19
    - libgfortran5 12.2.0 h337968e_19
    - libgomp 12.2.0 h65d4601_19
    - libjpeg-turbo 2.1.5.1 h0b41bf4_0
    - liblapack 3.9.0 16_linux64_openblas
    - libnghttp2 1.52.0 h61bc06f_0
    - libnsl 2.0.0 h7f98852_0
    - libopenblas 0.3.21 pthreads_h78a6416_3
    - libpng 1.6.39 h753d276_0
    - libsqlite 3.42.0 h2797004_0
    - libssh2 1.10.0 hf14f497_3
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libtiff 4.5.0 ha587672_6
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.3.0 h0b41bf4_0
    - libxcb 1.15 h0b41bf4_0
    - libzlib 1.2.13 h166bdaf_4
    - matplotlib-base 3.7.1 py38hd6c3c57_0
    - munkres 1.1.4 pyh9f0ad1d_0
    - ncurses 6.3 h27087fc_1
    - numpy 1.23.5 py38h7042d01_0
    - openjpeg 2.5.0 hfec8fc6_2
    - openssl 3.1.1 hd590300_1
    - packaging 23.1 pyhd8ed1ab_0
    - pandas 2.0.2 py38h01efb38_0
    - pillow 9.5.0 py38h885162f_1
    - pip 23.1.2 pyhd8ed1ab_0
    - platformdirs 3.5.1 pyhd8ed1ab_0
    - pooch 1.7.0 pyha770c72_3
    - pthread-stubs 0.4 h36c2ea0_1001
    - pyparsing 3.0.9 pyhd8ed1ab_0
    - pysam 0.21.0 py38h15b938a_1
    - pysocks 1.7.1 pyha2e5f31_6
    - python 3.8.16 he550d4f_1_cpython
    - python-dateutil 2.8.2 pyhd8ed1ab_0
    - python-tzdata 2023.3 pyhd8ed1ab_0
    - python_abi 3.8 3_cp38
    - pytz 2023.3 pyhd8ed1ab_0
    - readline 8.2 h8228510_1
    - requests 2.31.0 pyhd8ed1ab_0
    - scipy 1.10.1 py38h59b608b_3
    - setuptools 67.7.2 pyhd8ed1ab_0
    - six 1.16.0 pyh6c4a22f_0
    - termcolor 2.3.0 pyhd8ed1ab_0
    - tk 8.6.12 h27826a3_0
    - twobitreader 3.1.7 pyh864c0ab_1
    - typing-extensions 4.6.2 hd8ed1ab_0
    - typing_extensions 4.6.2 pyha770c72_0
    - unicodedata2 15.0.0 py38h0a891b7_0
    - urllib3 2.0.2 pyhd8ed1ab_0
    - wheel 0.40.0 pyhd8ed1ab_0
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xz 5.2.6 h166bdaf_0
    - zipp 3.15.0 pyhd8ed1ab_0
    - zlib 1.2.13 h166bdaf_4
    - zstd 1.5.2 h3eb15da_6
  run:
    - biopython >=1.64,<1.78
    - bowtie
    - cython >=0.22.0
    - fastx_toolkit
    - htslib >=1.17,<1.18.0a0
    - htslib >=1.17,<1.18.0a0
    - libgcc-ng >=12
    - libzlib >=1.2.13,<1.3.0a0
    - matplotlib-base >=1.4.0
    - numpy <=1.23.5
    - numpy >=1.23.5,<2.0a0
    - openssl >=3.1.1,<4.0a0
    - pandas >=0.17.0
    - pysam >=0.21.0,<0.21.1.0a0
    - python >=3.8,<3.9.0a0
    - python_abi 3.8.* *_cp38
    - scipy >=0.15.1
    - setuptools
    - termcolor
    - twobitreader >=3.0.0
    - zlib
test:
  commands:
    - counts_in_region -h
    - cs -h
    - get_count_vectors -h
    - make_wiggle -h
    - metagene -h
    - phase_by_size -h
    - psite -h
    - crossmap -h
    - gff_parent_types -h
    - reformat_transcripts -h
    - findjuncs -h
    - slidejuncs -h
  imports:
    - plastid
about:
  home: http://plastid.readthedocs.io/en/latest/
  license: BSD 3-Clause
  summary: plastid is a Python library for genomic analysis -- in particular, high-throughput
    sequencing data
extra:
  copy_test_source_files: true
  final: true
  skip-lints:
    - cython_must_be_in_host
