README.rst
pyproject.toml
setup.cfg
setup.py
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/opt/conda/conda-bld/plastid_1651772276994/work/kent/src/lib/dlist.c
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kent/LICENSE
kent/src/README
kent/src/htslib/LICENSE
kent/src/htslib/README
kent/src/htslib/bgzf.c
kent/src/htslib/bgzip.c
kent/src/htslib/config.h
kent/src/htslib/faidx.c
kent/src/htslib/hfile.c
kent/src/htslib/hfile_internal.h
kent/src/htslib/hfile_irods.c
kent/src/htslib/hfile_libcurl.c
kent/src/htslib/hfile_net.c
kent/src/htslib/hts.c
kent/src/htslib/hts_internal.h
kent/src/htslib/htsfile.c
kent/src/htslib/kfunc.c
kent/src/htslib/knetfile.c
kent/src/htslib/kstring.c
kent/src/htslib/md5.c
kent/src/htslib/plugin.c
kent/src/htslib/regidx.c
kent/src/htslib/sam.c
kent/src/htslib/synced_bcf_reader.c
kent/src/htslib/tabix.c
kent/src/htslib/tbx.c
kent/src/htslib/vcf.c
kent/src/htslib/vcf_sweep.c
kent/src/htslib/vcfutils.c
kent/src/htslib/version.h
kent/src/htslib/cram/cram.h
kent/src/htslib/cram/cram_codecs.c
kent/src/htslib/cram/cram_codecs.h
kent/src/htslib/cram/cram_decode.c
kent/src/htslib/cram/cram_decode.h
kent/src/htslib/cram/cram_encode.c
kent/src/htslib/cram/cram_encode.h
kent/src/htslib/cram/cram_external.c
kent/src/htslib/cram/cram_index.c
kent/src/htslib/cram/cram_index.h
kent/src/htslib/cram/cram_io.c
kent/src/htslib/cram/cram_io.h
kent/src/htslib/cram/cram_samtools.c
kent/src/htslib/cram/cram_samtools.h
kent/src/htslib/cram/cram_stats.c
kent/src/htslib/cram/cram_stats.h
kent/src/htslib/cram/cram_structs.h
kent/src/htslib/cram/files.c
kent/src/htslib/cram/mFILE.c
kent/src/htslib/cram/mFILE.h
kent/src/htslib/cram/misc.h
kent/src/htslib/cram/open_trace_file.c
kent/src/htslib/cram/open_trace_file.h
kent/src/htslib/cram/os.h
kent/src/htslib/cram/pooled_alloc.c
kent/src/htslib/cram/pooled_alloc.h
kent/src/htslib/cram/rANS_byte.h
kent/src/htslib/cram/rANS_static.c
kent/src/htslib/cram/rANS_static.h
kent/src/htslib/cram/sam_header.c
kent/src/htslib/cram/sam_header.h
kent/src/htslib/cram/string_alloc.c
kent/src/htslib/cram/string_alloc.h
kent/src/htslib/cram/thread_pool.c
kent/src/htslib/cram/thread_pool.h
kent/src/htslib/cram/vlen.c
kent/src/htslib/cram/vlen.h
kent/src/htslib/cram/zfio.c
kent/src/htslib/cram/zfio.h
kent/src/htslib/htslib/bgzf.h
kent/src/htslib/htslib/cram.h
kent/src/htslib/htslib/faidx.h
kent/src/htslib/htslib/hfile.h
kent/src/htslib/htslib/hts.h
kent/src/htslib/htslib/hts_defs.h
kent/src/htslib/htslib/kbitset.h
kent/src/htslib/htslib/kfunc.h
kent/src/htslib/htslib/khash.h
kent/src/htslib/htslib/khash_str2int.h
kent/src/htslib/htslib/klist.h
kent/src/htslib/htslib/knetfile.h
kent/src/htslib/htslib/kseq.h
kent/src/htslib/htslib/ksort.h
kent/src/htslib/htslib/kstring.h
kent/src/htslib/htslib/regidx.h
kent/src/htslib/htslib/sam.h
kent/src/htslib/htslib/synced_bcf_reader.h
kent/src/htslib/htslib/tbx.h
kent/src/htslib/htslib/vcf.h
kent/src/htslib/htslib/vcf_sweep.h
kent/src/htslib/htslib/vcfutils.h
kent/src/inc/LICENSE
kent/src/inc/ace.h
kent/src/inc/aliType.h
kent/src/inc/annoAssembly.h
kent/src/inc/annoFilter.h
kent/src/inc/annoFormatTab.h
kent/src/inc/annoFormatter.h
kent/src/inc/annoGrateWig.h
kent/src/inc/annoGrator.h
kent/src/inc/annoGratorQuery.h
kent/src/inc/annoOption.h
kent/src/inc/annoRow.h
kent/src/inc/annoStreamBigBed.h
kent/src/inc/annoStreamBigWig.h
kent/src/inc/annoStreamLongTabix.h
kent/src/inc/annoStreamTab.h
kent/src/inc/annoStreamVcf.h
kent/src/inc/annoStreamer.h
kent/src/inc/apacheLog.h
kent/src/inc/asParse.h
kent/src/inc/aveStats.h
kent/src/inc/axt.h
kent/src/inc/bPlusTree.h
kent/src/inc/bamFile.h
kent/src/inc/bandExt.h
kent/src/inc/base64.h
kent/src/inc/basicBed.h
kent/src/inc/bbiAlias.h
kent/src/inc/bbiFile.h
kent/src/inc/bedTabix.h
kent/src/inc/bigBed.h
kent/src/inc/bigWig.h
kent/src/inc/binRange.h
kent/src/inc/bits.h
kent/src/inc/blastParse.h
kent/src/inc/boxClump.h
kent/src/inc/boxLump.h
kent/src/inc/bwgInternal.h
kent/src/inc/cda.h
kent/src/inc/chain.h
kent/src/inc/chainBlock.h
kent/src/inc/chainConnect.h
kent/src/inc/chainToAxt.h
kent/src/inc/chainToPsl.h
kent/src/inc/cheapcgi.h
kent/src/inc/cirTree.h
kent/src/inc/codebias.h
kent/src/inc/common.h
kent/src/inc/correlate.h
kent/src/inc/crTree.h
kent/src/inc/crudeali.h
kent/src/inc/csv.h
kent/src/inc/diGraph.h
kent/src/inc/dlist.h
kent/src/inc/dnaLoad.h
kent/src/inc/dnaMarkov.h
kent/src/inc/dnaMotif.h
kent/src/inc/dnaseq.h
kent/src/inc/dnautil.h
kent/src/inc/dtdParse.h
kent/src/inc/dyOut.h
kent/src/inc/dystring.h
kent/src/inc/elmTree.h
kent/src/inc/emblParse.h
kent/src/inc/ens.h
kent/src/inc/errAbort.h
kent/src/inc/errCatch.h
kent/src/inc/fa.h
kent/src/inc/fieldedTable.h
kent/src/inc/filePath.h
kent/src/inc/flydna.h
kent/src/inc/fof.h
kent/src/inc/fq.h
kent/src/inc/fuzzyFind.h
kent/src/inc/gapCalc.h
kent/src/inc/gdf.h
kent/src/inc/genoFind.h
kent/src/inc/genomeRangeTree.h
kent/src/inc/gfClientLib.h
kent/src/inc/gfPcrLib.h
kent/src/inc/gfWebLib.h
kent/src/inc/gff.h
kent/src/inc/gff3.h
kent/src/inc/gfxPoly.h
kent/src/inc/gifLabel.h
kent/src/inc/hacTree.h
kent/src/inc/hash.h
kent/src/inc/hex.h
kent/src/inc/hgGene.h
kent/src/inc/hgap.h
kent/src/inc/hgdb.h
kent/src/inc/histogram.h
kent/src/inc/hmac.h
kent/src/inc/hmmPfamParse.h
kent/src/inc/hmmstats.h
kent/src/inc/htmlColor.h
kent/src/inc/htmlPage.h
kent/src/inc/htmshell.h
kent/src/inc/https.h
kent/src/inc/intValTree.h
kent/src/inc/internet.h
kent/src/inc/itsa.h
kent/src/inc/iupac.h
kent/src/inc/jointalign.h
kent/src/inc/jpegSize.h
kent/src/inc/jsonParse.h
kent/src/inc/jsonQuery.h
kent/src/inc/jsonWrite.h
kent/src/inc/keys.h
kent/src/inc/knetUdc.h
kent/src/inc/kxTok.h
kent/src/inc/linefile.h
kent/src/inc/localmem.h
kent/src/inc/log.h
kent/src/inc/longTabix.h
kent/src/inc/longToList.h
kent/src/inc/maDbRep.h
kent/src/inc/maToFf.h
kent/src/inc/maf.h
kent/src/inc/mailViaPipe.h
kent/src/inc/matrixMarket.h
kent/src/inc/md5.h
kent/src/inc/memalloc.h
kent/src/inc/memgfx.h
kent/src/inc/meta.h
kent/src/inc/metaWig.h
kent/src/inc/mime.h
kent/src/inc/net.h
kent/src/inc/nib.h
kent/src/inc/nibTwo.h
kent/src/inc/nt4.h
kent/src/inc/obscure.h
kent/src/inc/oldGff.h
kent/src/inc/oligoTm.h
kent/src/inc/ooc.h
kent/src/inc/options.h
kent/src/inc/pairDistance.h
kent/src/inc/pairHmm.h
kent/src/inc/paraFetch.h
kent/src/inc/patSpace.h
kent/src/inc/peakCluster.h
kent/src/inc/phyloTree.h
kent/src/inc/pipeline.h
kent/src/inc/portable.h
kent/src/inc/psGfx.h
kent/src/inc/psPoly.h
kent/src/inc/pscmGfx.h
kent/src/inc/psl.h
kent/src/inc/pslTbl.h
kent/src/inc/pslTransMap.h
kent/src/inc/pthreadDoList.h
kent/src/inc/pthreadWrap.h
kent/src/inc/qa.h
kent/src/inc/quickHeap.h
kent/src/inc/quotedP.h
kent/src/inc/ra.h
kent/src/inc/raToStruct.h
kent/src/inc/rainbow.h
kent/src/inc/rangeTree.h
kent/src/inc/rbTree.h
kent/src/inc/regexHelper.h
kent/src/inc/repMask.h
kent/src/inc/rle.h
kent/src/inc/rnautil.h
kent/src/inc/rql.h
kent/src/inc/rqlToSql.h
kent/src/inc/rudp.h
kent/src/inc/scoreWindow.h
kent/src/inc/seg.h
kent/src/inc/seqOut.h
kent/src/inc/seqStats.h
kent/src/inc/shaRes.h
kent/src/inc/sig.h
kent/src/inc/slog.h
kent/src/inc/snof.h
kent/src/inc/snofmake.h
kent/src/inc/spaceSaver.h
kent/src/inc/spacedColumn.h
kent/src/inc/spacedSeed.h
kent/src/inc/sparseMatrix.h
kent/src/inc/splatAli.h
kent/src/inc/splix.h
kent/src/inc/sqlList.h
kent/src/inc/sqlNum.h
kent/src/inc/sqlReserved.h
kent/src/inc/srcVersion.h
kent/src/inc/strex.h
kent/src/inc/subText.h
kent/src/inc/sufa.h
kent/src/inc/sufx.h
kent/src/inc/supStitch.h
kent/src/inc/synQueue.h
kent/src/inc/tabRow.h
kent/src/inc/tagSchema.h
kent/src/inc/tagStorm.h
kent/src/inc/tagToJson.h
kent/src/inc/tagToSql.h
kent/src/inc/textOut.h
kent/src/inc/tokenizer.h
kent/src/inc/trans3.h
kent/src/inc/trix.h
kent/src/inc/twoBit.h
kent/src/inc/udc.h
kent/src/inc/unfin.h
kent/src/inc/uuid.h
kent/src/inc/vGfx.h
kent/src/inc/vMatrix.h
kent/src/inc/vcf.h
kent/src/inc/vcfBits.h
kent/src/inc/verbose.h
kent/src/inc/windowsToAscii.h
kent/src/inc/wormdna.h
kent/src/inc/xAli.h
kent/src/inc/xa.h
kent/src/inc/xap.h
kent/src/inc/xenalign.h
kent/src/inc/xmlEscape.h
kent/src/inc/xp.h
kent/src/inc/zlibFace.h
kent/src/lib/LICENSE
kent/src/lib/README
kent/src/lib/aliType.c
kent/src/lib/annoAssembly.c
kent/src/lib/annoFilter.c
kent/src/lib/annoFormatTab.c
kent/src/lib/annoFormatter.c
kent/src/lib/annoGrateWig.c
kent/src/lib/annoGrator.c
kent/src/lib/annoGratorQuery.c
kent/src/lib/annoOption.c
kent/src/lib/annoRow.c
kent/src/lib/annoStreamBigBed.c
kent/src/lib/annoStreamBigWig.c
kent/src/lib/annoStreamLongTabix.c
kent/src/lib/annoStreamTab.c
kent/src/lib/annoStreamVcf.c
kent/src/lib/annoStreamer.c
kent/src/lib/apacheLog.c
kent/src/lib/asParse.c
kent/src/lib/aveStats.c
kent/src/lib/axt.c
kent/src/lib/axtAffine.c
kent/src/lib/bPlusTree.c
kent/src/lib/bamFile.c
kent/src/lib/base64.c
kent/src/lib/basicBed.c
kent/src/lib/bbiAlias.c
kent/src/lib/bbiRead.c
kent/src/lib/bbiWrite.c
kent/src/lib/bedTabix.c
kent/src/lib/bigBed.c
kent/src/lib/binRange.c
kent/src/lib/bits.c
kent/src/lib/blastOut.c
kent/src/lib/blastParse.c
kent/src/lib/boxClump.c
kent/src/lib/boxLump.c
kent/src/lib/bwgCreate.c
kent/src/lib/bwgQuery.c
kent/src/lib/bwgValsOnChrom.c
kent/src/lib/cda.c
kent/src/lib/chain.c
kent/src/lib/chainBlock.c
kent/src/lib/chainConnect.c
kent/src/lib/chainToAxt.c
kent/src/lib/chainToPsl.c
kent/src/lib/cheapcgi.c
kent/src/lib/cirTree.c
kent/src/lib/codebias.c
kent/src/lib/colHash.c
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kent/src/lib/crTree.c
kent/src/lib/csv.c
kent/src/lib/dgRange.c
kent/src/lib/diGraph.c
kent/src/lib/dlist.c
kent/src/lib/dnaLoad.c
kent/src/lib/dnaMarkov.c
kent/src/lib/dnaMotif.c
kent/src/lib/dnaseq.c
kent/src/lib/dnautil.c
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kent/src/lib/dystring.c
kent/src/lib/elmTree.c
kent/src/lib/emblParse.c
kent/src/lib/errAbort.c
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kent/src/lib/fa.c
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kent/src/lib/fixColor.c
kent/src/lib/flydna.c
kent/src/lib/fof.c
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kent/src/lib/freeType.c
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kent/src/lib/fuzzyShow.c
kent/src/lib/gapCalc.c
kent/src/lib/gdf.c
kent/src/lib/gemfont.c
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kent/src/lib/genomeRangeTree.c
kent/src/lib/gfNet.c
kent/src/lib/gff.c
kent/src/lib/gff3.c
kent/src/lib/gfxPoly.c
kent/src/lib/gifLabel.c
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kent/src/lib/gifcomp.c
kent/src/lib/gifdecomp.c
kent/src/lib/gifread.c
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kent/src/lib/hex.c
kent/src/lib/histogram.c
kent/src/lib/hmac.c
kent/src/lib/hmmPfamParse.c
kent/src/lib/hmmstats.c
kent/src/lib/htmlColor.c
kent/src/lib/htmlPage.c
kent/src/lib/htmshell.c
kent/src/lib/https.c
kent/src/lib/intExp.c
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kent/src/lib/iupac.c
kent/src/lib/jointalign.c
kent/src/lib/jpegSize.c
kent/src/lib/jsonParse.c
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kent/src/lib/jsonWrite.c
kent/src/lib/keys.c
kent/src/lib/knetUdc.c
kent/src/lib/kxTok.c
kent/src/lib/lineFileOnBigBed.c
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kent/src/lib/mailViaPipe.c
kent/src/lib/matrixMarket.c
kent/src/lib/md5.c
kent/src/lib/memalloc.c
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kent/src/lib/mime.c
kent/src/lib/net.c
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kent/src/lib/numObscure.c
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kent/src/lib/oldGff.c
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kent/src/lib/peakCluster.c
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kent/src/lib/pngwrite.c
kent/src/lib/portimpl.c
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kent/src/lib/psl.c
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kent/src/lib/pslTbl.c
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kent/src/lib/quotedP.c
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kent/src/lib/rainbow.c
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kent/src/lib/rqlToSql.c
kent/src/lib/rudp.c
kent/src/lib/scoreWindow.c
kent/src/lib/seg.c
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kent/src/lib/servBrcMcw.c
kent/src/lib/servCrunx.c
kent/src/lib/servcis.c
kent/src/lib/servcl.c
kent/src/lib/servmsII.c
kent/src/lib/servpws.c
kent/src/lib/shaRes.c
kent/src/lib/slog.c
kent/src/lib/snof.c
kent/src/lib/snofmake.c
kent/src/lib/snofsig.c
kent/src/lib/spaceSaver.c
kent/src/lib/spacedColumn.c
kent/src/lib/spacedSeed.c
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kent/src/lib/tabRow.c
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kent/src/lib/udc.c
kent/src/lib/uuid.c
kent/src/lib/vGfx.c
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kent/src/lib/vcf.c
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kent/src/lib/wildcmp.c
kent/src/lib/windowsToAscii.c
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kent/src/lib/xmlEscape.c
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