bin/bin/parsnp_core
bin/examples/mers_virus/genomes/Al-Hasa_12_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_15_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_16_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_17_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_18_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_19_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_1_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_21_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_25_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_2_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_3_2013.fna
bin/examples/mers_virus/genomes/Al-Hasa_4_2013.fna
bin/examples/mers_virus/genomes/Bisha_1_2012.fna
bin/examples/mers_virus/genomes/Buraidah_1_2013.fna
bin/examples/mers_virus/genomes/EMC_2012.fna
bin/examples/mers_virus/genomes/England-Qatar_2012.fna
bin/examples/mers_virus/genomes/England1.fna
bin/examples/mers_virus/genomes/FRA-UAE.fna
bin/examples/mers_virus/genomes/Hafr-Al-Batin_1_2013.fna
bin/examples/mers_virus/genomes/Hafr-Al-Batin_2_2013.fna
bin/examples/mers_virus/genomes/Hafr-Al_Batin_6_2013.fna
bin/examples/mers_virus/genomes/Indiana-USA-1_Saudi_Arabia_2014.fna
bin/examples/mers_virus/genomes/Jeddah_1_2013.fna
bin/examples/mers_virus/genomes/Jordan-N3_2012.fna
bin/examples/mers_virus/genomes/KF192507.1.fna
bin/examples/mers_virus/genomes/KFU-HKU_1.fna
bin/examples/mers_virus/genomes/KFU-HKU_13.fna
bin/examples/mers_virus/genomes/KFU-HKU_19Dam.fna
bin/examples/mers_virus/genomes/KJ477102.1.fna
bin/examples/mers_virus/genomes/KSA-CAMEL-363.fna
bin/examples/mers_virus/genomes/KSA-CAMEL-376.fna
bin/examples/mers_virus/genomes/KSA-CAMEL-378.fna
bin/examples/mers_virus/genomes/KSA-CAMEL-503.fna
bin/examples/mers_virus/genomes/KSA-CAMEL-505.fna
bin/examples/mers_virus/genomes/NC_019843.2.fna
bin/examples/mers_virus/genomes/Qatar3.fna
bin/examples/mers_virus/genomes/Qatar4.fna
bin/examples/mers_virus/genomes/Riyadh_14_2013.fna
bin/examples/mers_virus/genomes/Riyadh_1_2012.fna
bin/examples/mers_virus/genomes/Riyadh_2_2012.fna
bin/examples/mers_virus/genomes/Riyadh_3_2013.fna
bin/examples/mers_virus/genomes/Riyadh_4_2013.fna
bin/examples/mers_virus/genomes/Riyadh_5_2013.fna
bin/examples/mers_virus/genomes/Riyadh_9_2013.fna
bin/examples/mers_virus/genomes/Taif_1_2013.fna
bin/examples/mers_virus/genomes/Wadi-Ad-Dawasir_1_2013.fna
bin/examples/mers_virus/ref/England1.fna
bin/examples/mers_virus/ref/England1.gbk
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bin/muscle/ChangeLog
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bin/muscle/Makefile.in
bin/muscle/NEWS
bin/muscle/README
bin/muscle/aclocal.m4
bin/muscle/autogen.sh
bin/muscle/bin/muscle
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bin/muscle/config/config.guess
bin/muscle/config/config.sub
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bin/muscle/config/missing
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bin/muscle/doxygen.am
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/dpregionlist.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/edgelist.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/estring.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/gonnet.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/intmath.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/msadist.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/objscore.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/profile.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/pwpath.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/scorehistory.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/seq.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/seqvect.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/textfile.h
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bin/muscle/include/libMUSCLE-3.7/libMUSCLE/tree.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/types.h
bin/muscle/include/libMUSCLE-3.7/libMUSCLE/unixio.h
bin/muscle/lib/libMUSCLE-3.7.a
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bin/muscle/lib/libMUSCLE-3.7.so.1
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bin/muscle/libMUSCLE-3.7.pc
bin/muscle/libMUSCLE-3.7.pc.in
bin/muscle/libtool
bin/parsnp
bin/template.ini
