{
    "edges": [
        {
            "from": "source",
            "name": "source_ref-chrC:1350-1500",
            "to": "ref-chrC:1350-1500"
        },
        {
            "from": "ref-chrC:1350-1500",
            "name": "ref-chrC:1350-1500_chrC:1501-1697:CGGAGATACCCTCTGTCTCCGCTAACATTTCCCCGCGGACAAAATTTGTCGGCTGGGAGGAATAGGTGCAAACGCATAATATACCCCTCTTACTTTTTGTTAGGGTCTAGTCCGAATCTAAAAAATGACTAAGGACTCTCAGAGTGATGGATATATGCCTCGCGACGCCGATCTGTGCTTATGTCGCAGCTTTGGCATCAAACCAGTTTCACATACCCTGCCTAAAAGATTCCCATACTGCGAAATCGCAAGATTGTACAAGTTGTAGTCTGTGCGCCAGCGTGAGCACGGCACTCG",
            "sequences": [
                "swap3:1"
            ],
            "to": "chrC:1501-1697:CGGAGATACCCTCTGTCTCCGCTAACATTTCCCCGCGGACAAAATTTGTCGGCTGGGAGGAATAGGTGCAAACGCATAATATACCCCTCTTACTTTTTGTTAGGGTCTAGTCCGAATCTAAAAAATGACTAAGGACTCTCAGAGTGATGGATATATGCCTCGCGACGCCGATCTGTGCTTATGTCGCAGCTTTGGCATCAAACCAGTTTCACATACCCTGCCTAAAAGATTCCCATACTGCGAAATCGCAAGATTGTACAAGTTGTAGTCTGTGCGCCAGCGTGAGCACGGCACTCG"
        },
        {
            "from": "ref-chrC:1350-1500",
            "name": "ref-chrC:1350-1500_ref-chrC:1501-1697",
            "sequences": [
                "REF",
                "swap3:0"
            ],
            "to": "ref-chrC:1501-1697"
        },
        {
            "from": "chrC:1501-1697:CGGAGATACCCTCTGTCTCCGCTAACATTTCCCCGCGGACAAAATTTGTCGGCTGGGAGGAATAGGTGCAAACGCATAATATACCCCTCTTACTTTTTGTTAGGGTCTAGTCCGAATCTAAAAAATGACTAAGGACTCTCAGAGTGATGGATATATGCCTCGCGACGCCGATCTGTGCTTATGTCGCAGCTTTGGCATCAAACCAGTTTCACATACCCTGCCTAAAAGATTCCCATACTGCGAAATCGCAAGATTGTACAAGTTGTAGTCTGTGCGCCAGCGTGAGCACGGCACTCG",
            "name": "chrC:1501-1697:CGGAGATACCCTCTGTCTCCGCTAACATTTCCCCGCGGACAAAATTTGTCGGCTGGGAGGAATAGGTGCAAACGCATAATATACCCCTCTTACTTTTTGTTAGGGTCTAGTCCGAATCTAAAAAATGACTAAGGACTCTCAGAGTGATGGATATATGCCTCGCGACGCCGATCTGTGCTTATGTCGCAGCTTTGGCATCAAACCAGTTTCACATACCCTGCCTAAAAGATTCCCATACTGCGAAATCGCAAGATTGTACAAGTTGTAGTCTGTGCGCCAGCGTGAGCACGGCACTCG_ref-chrC:1698-1699",
            "sequences": [
                "swap3:1"
            ],
            "to": "ref-chrC:1698-1699"
        },
        {
            "from": "ref-chrC:1501-1697",
            "name": "ref-chrC:1501-1697_ref-chrC:1698-1699",
            "sequences": [
                "REF",
                "swap3:0"
            ],
            "to": "ref-chrC:1698-1699"
        },
        {
            "from": "ref-chrC:1698-1699",
            "name": "ref-chrC:1698-1699_ref-chrC:1700-1849",
            "sequences": [
                "REF",
                "swap3:0",
                "swap3:1"
            ],
            "to": "ref-chrC:1700-1849"
        },
        {
            "from": "ref-chrC:1700-1849",
            "name": "ref-chrC:1700-1849_sink",
            "to": "sink"
        }
    ],
    "model_name": "Graph from ../genotyping_test_2/chrC.vcf",
    "nodes": [
        {
            "name": "source",
            "sequence": "NNNNNNNNNN"
        },
        {
            "name": "ref-chrC:1350-1500",
            "reference": "chrC:1350-1500",
            "reference_sequence": "CTAACATACGGAAACGGTCCGCCTGGTCCACCATCATGCCTCCCGCCCATCGGTCAAAATGAATTTCCTCCTTTTAACCGGCAGGGTTGATAAGGTGCTCATAGAGAGCGTACCCTCTTAGTAGAGAACCAGGCACCGTTACCACTTTGTC"
        },
        {
            "name": "chrC:1501-1697:CGGAGATACCCTCTGTCTCCGCTAACATTTCCCCGCGGACAAAATTTGTCGGCTGGGAGGAATAGGTGCAAACGCATAATATACCCCTCTTACTTTTTGTTAGGGTCTAGTCCGAATCTAAAAAATGACTAAGGACTCTCAGAGTGATGGATATATGCCTCGCGACGCCGATCTGTGCTTATGTCGCAGCTTTGGCATCAAACCAGTTTCACATACCCTGCCTAAAAGATTCCCATACTGCGAAATCGCAAGATTGTACAAGTTGTAGTCTGTGCGCCAGCGTGAGCACGGCACTCG",
            "position": "chrC:1501-1697",
            "sequence": "CGGAGATACCCTCTGTCTCCGCTAACATTTCCCCGCGGACAAAATTTGTCGGCTGGGAGGAATAGGTGCAAACGCATAATATACCCCTCTTACTTTTTGTTAGGGTCTAGTCCGAATCTAAAAAATGACTAAGGACTCTCAGAGTGATGGATATATGCCTCGCGACGCCGATCTGTGCTTATGTCGCAGCTTTGGCATCAAACCAGTTTCACATACCCTGCCTAAAAGATTCCCATACTGCGAAATCGCAAGATTGTACAAGTTGTAGTCTGTGCGCCAGCGTGAGCACGGCACTCG"
        },
        {
            "name": "ref-chrC:1501-1697",
            "reference": "chrC:1501-1697",
            "reference_sequence": "GCGTTGTAAGCTACCATATTCAATCTGTGCCAGGGATCGAGCCACAGGCACCGCTCAATCTCGCGGGAGATTGTGCAAAGAGTCTTACCTTTCGTCGACCTCCGCCTCGCTCGTGAATCTTGCGATCGATTGAAAGTCACGGGTAGAGTGATGTTCGGGCGAATCAGACAGGCAGATGCAATGGAGGTTCCCGGATA"
        },
        {
            "name": "ref-chrC:1698-1699",
            "reference": "chrC:1698-1699",
            "reference_sequence": "GT"
        },
        {
            "name": "ref-chrC:1700-1849",
            "reference": "chrC:1700-1849",
            "reference_sequence": "GTCAGCTATCTTTCTTTGAGCGCCTGGAATCGATCTTGGCTCCGTATGTACGGAAGGACGTGGGGAGCCCAGTCCGTTCCCTCAACGGATCAGATCGCTCTCGAAATTATCGCAGATGGGCGTGAGGAATTTGGGCCCCAACGTTTACCT"
        },
        {
            "name": "sink",
            "sequence": "NNNNNNNNNN"
        }
    ],
    "paths": [
        {
            "nodes": [
                "ref-chrC:1350-1500",
                "ref-chrC:1501-1697",
                "ref-chrC:1698-1699",
                "ref-chrC:1700-1849"
            ],
            "path_id": "REF|1",
            "sequence": "REF"
        }
    ],
    "sequencenames": [
        "REF",
        "swap3:0",
        "swap3:1"
    ],
    "target_regions": [
        "chrC:1350-1849"
    ]
}
