# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Wed Jun  1 13:15:26 2022
# ------------------------------------------------

package:
  name: ntjoin
  version: 1.1.0
source:
  sha256: 727d8786ecf7717f3ee3922f667ef99fc19eea67d5e0f3f27ddf2fe9eac1b862
  url: https://github.com/bcgsc/ntJoin/releases/download/v1.1.0/ntJoin-1.1.0.tar.gz
build:
  number: '0'
  string: py39h6935b12_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_10
    - gcc_impl_linux-64 10.3.0 hf2f2afa_16
    - gcc_linux-64 10.3.0 hc39de41_10
    - gxx_impl_linux-64 10.3.0 hf2f2afa_16
    - gxx_linux-64 10.3.0 h2593f52_10
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libgcc-devel_linux-64 10.3.0 he6cfe16_16
    - libgcc-ng 12.1.0 h8d9b700_16
    - libgomp 12.1.0 h8d9b700_16
    - libsanitizer 10.3.0 h26c7422_16
    - libstdcxx-devel_linux-64 10.3.0 he6cfe16_16
    - libstdcxx-ng 12.1.0 ha89aaad_16
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2022.5.18.1 ha878542_0
    - cmake 3.23.2 h5432695_0
    - expat 2.4.8 h27087fc_0
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.19.3 h08a2579_0
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libcurl 7.83.1 h2283fc2_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 12.1.0 h8d9b700_16
    - libgomp 12.1.0 h8d9b700_16
    - libnghttp2 1.47.0 he49606f_0
    - libnsl 2.0.0 h7f98852_0
    - libssh2 1.10.0 ha35d2d1_2
    - libstdcxx-ng 12.1.0 ha89aaad_16
    - libuuid 2.32.1 h7f98852_1000
    - libuv 1.43.0 h7f98852_0
    - libzlib 1.2.12 h166bdaf_0
    - lz4-c 1.9.3 h9c3ff4c_1
    - make 4.3 hd18ef5c_1
    - meson 0.62.1 pyhd8ed1ab_0
    - ncurses 6.3 h27087fc_1
    - ninja 1.11.0 h924138e_0
    - openssl 3.0.3 h166bdaf_0
    - pip 22.1.2 pyhd8ed1ab_0
    - python 3.9.13 h2660328_0_cpython
    - python_abi 3.9 2_cp39
    - readline 8.1 h46c0cb4_0
    - rhash 1.4.1 h7f98852_0
    - setuptools 62.3.2 py39hf3d152e_0
    - sqlite 3.38.5 h4ff8645_0
    - tk 8.6.12 h27826a3_0
    - tzdata 2022a h191b570_0
    - wheel 0.37.1 pyhd8ed1ab_0
    - xz 5.2.5 h516909a_1
    - zlib 1.2.12 h166bdaf_0
    - zstd 1.5.2 h8a70e8d_1
  run:
    - _openmp_mutex >=4.5
    - bedtools >=2.21.0
    - libgcc-ng >=12
    - libstdcxx-ng >=12
    - libzlib >=1.2.12,<1.3.0a0
    - make
    - pybedtools
    - pymannkendall
    - pysam >=0.16.0
    - python >=3.9,<3.10.0a0
    - python-igraph
    - python_abi 3.9.* *_cp39
    - samtools >=1.10
    - zlib >=1.2.12,<1.3.0a0
test:
  commands:
    - ntJoin help
    - samtools --help
about:
  home: http://www.bcgsc.ca/platform/bioinfo/software/ntjoin
  license: GPL-3.0
  license_file: LICENSE
  summary: Genome assembly scaffolder using minimizer graphs
extra:
  copy_test_source_files: true
  final: true
