# This file created by conda-build 3.19.2
# meta.yaml template originally from:
# /opt/recipe, last modified Sun Aug 30 12:16:23 2020
# ------------------------------------------------

package:
    name: nanopolish
    version: 0.13.2
source:
    git_rev: v0.13.2
    git_url: https://github.com/jts/nanopolish
    patches:
        - nanopolish.patch
    sha256: be9ab70ff0753519323e4cd0e6be50b164c4239bd9c20ffa5207c2d6fc20d120
build:
    binary_relocation: false
    number: '2'
    string: he3b7ca5_2
requirements:
    build:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 1_gnu
        - binutils_impl_linux-64 2.34 h2122c62_9
        - binutils_linux-64 2.34 h47ac705_27
        - gcc_impl_linux-64 7.5.0 hda68d29_13
        - gcc_linux-64 7.5.0 hf34d7eb_27
        - gxx_impl_linux-64 7.5.0 h64c220c_13
        - gxx_linux-64 7.5.0 ha781d05_27
        - kernel-headers_linux-64 2.6.32 h77966d4_13
        - ld_impl_linux-64 2.34 hc38a660_9
        - libgcc-ng 9.3.0 h24d8f2e_16
        - libgomp 9.3.0 h24d8f2e_16
        - libstdcxx-ng 9.3.0 hdf63c60_16
        - sysroot_linux-64 2.12 h77966d4_13
    host:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 1_gnu
        - bzip2 1.0.8 h516909a_3
        - c-ares 1.16.1 h516909a_3
        - ca-certificates 2020.6.20 hecda079_0
        - eigen 3.3.7 hc9558a2_1001
        - hdf5 1.8.18 3
        - htslib 1.10.2 hd3b49d5_1
        - krb5 1.17.1 hfafb76e_2
        - libcurl 7.71.1 hcdd3856_5
        - libdeflate 1.6 h516909a_0
        - libedit 3.1.20191231 he28a2e2_2
        - libev 4.33 h516909a_0
        - libgcc-ng 9.3.0 h24d8f2e_16
        - libgfortran 3.0.0 1
        - libgomp 9.3.0 h24d8f2e_16
        - libnghttp2 1.41.0 h8cfc5f6_2
        - libssh2 1.9.0 hab1572f_5
        - libstdcxx-ng 9.3.0 hdf63c60_16
        - llvm-openmp 8.0.1 hc9558a2_0
        - ncurses 6.2 he1b5a44_1
        - openmp 8.0.1 0
        - openssl 1.1.1g h516909a_1
        - tk 8.6.10 hed695b0_0
        - xz 5.2.5 h516909a_1
        - zlib 1.2.11 h516909a_1009
    run:
        - biopython
        - bwa
        - bzip2 >=1.0.8,<2.0a0
        - eigen
        - hdf5 ==1.8.18
        - htslib >=1.10.2,<1.11.0a0
        - libcurl >=7.71.1,<8.0a0
        - libcurl >=7.71.1,<8.0a0
        - libdeflate
        - libgcc-ng >=7.5.0
        - libstdcxx-ng >=7.5.0
        - minimap2
        - ncurses >=6.2,<6.3.0a0
        - openmp
        - python
        - zlib >=1.2.11,<1.3.0a0
        - zlib >=1.2.11,<1.3.0a0
test:
    commands:
        - nanopolish --help
        - nanopolish --version
about:
    home: https://github.com/jts/nanopolish
    license: MIT
    license_file: LICENSE
    summary: Signal-level algorithms for MinION data.
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - usegalaxy-eu:nanopolish_eventalign
    skip-lints:
        - uses_vcs_url
